01:06:10 Started by upstream project "Trigger" build number 258 01:06:10 originally caused by: 01:06:10 Started by timer 01:06:10 Running as SYSTEM 01:06:10 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-test-integration 01:06:10 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins53968946370306487.sh 01:06:10 + rm -rf /home/omero/workspace/OMERO-test-integration/.venv3 01:06:11 + python3 -m venv /home/omero/workspace/OMERO-test-integration/.venv3 01:06:15 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate 01:06:15 ++ deactivate nondestructive 01:06:15 ++ '[' -n '' ']' 01:06:15 ++ '[' -n '' ']' 01:06:15 ++ '[' -n /bin/bash -o -n '' ']' 01:06:15 ++ hash -r 01:06:15 ++ '[' -n '' ']' 01:06:15 ++ unset VIRTUAL_ENV 01:06:15 ++ '[' '!' nondestructive = nondestructive ']' 01:06:15 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3 01:06:15 ++ export VIRTUAL_ENV 01:06:15 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:06:15 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:06:15 ++ export PATH 01:06:15 ++ '[' -n '' ']' 01:06:15 ++ '[' -z '' ']' 01:06:15 ++ _OLD_VIRTUAL_PS1= 01:06:15 ++ PS1='(.venv3) ' 01:06:15 ++ export PS1 01:06:15 ++ '[' -n /bin/bash -o -n '' ']' 01:06:15 ++ hash -r 01:06:15 + pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl 01:06:15 Collecting zeroc-ice==3.6.5 01:06:16 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB) 01:06:17 Installing collected packages: zeroc-ice 01:06:18 Successfully installed zeroc-ice-3.6.5 01:06:18 + pip install -U pip future setuptools 01:06:18 Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3) 01:06:18 Collecting pip 01:06:18 Using cached pip-24.2-py3-none-any.whl (1.8 MB) 01:06:19 Collecting future 01:06:19 Using cached future-1.0.0-py3-none-any.whl (491 kB) 01:06:19 Requirement already satisfied: setuptools in ./.venv3/lib/python3.9/site-packages (53.0.0) 01:06:19 Collecting setuptools 01:06:19 Using cached setuptools-75.2.0-py3-none-any.whl (1.2 MB) 01:06:19 Installing collected packages: setuptools, pip, future 01:06:19 Attempting uninstall: setuptools 01:06:19 Found existing installation: setuptools 53.0.0 01:06:19 Uninstalling setuptools-53.0.0: 01:06:19 Successfully uninstalled setuptools-53.0.0 01:06:20 Attempting uninstall: pip 01:06:20 Found existing installation: pip 21.2.3 01:06:20 Uninstalling pip-21.2.3: 01:06:20 Successfully uninstalled pip-21.2.3 01:06:22 Successfully installed future-1.0.0 pip-24.2 setuptools-75.2.0 01:06:22 + pip install markdown 01:06:22 Collecting markdown 01:06:22 Using cached Markdown-3.7-py3-none-any.whl.metadata (7.0 kB) 01:06:23 Collecting importlib-metadata>=4.4 (from markdown) 01:06:23 Using cached importlib_metadata-8.5.0-py3-none-any.whl.metadata (4.8 kB) 01:06:23 Collecting zipp>=3.20 (from importlib-metadata>=4.4->markdown) 01:06:23 Using cached zipp-3.20.2-py3-none-any.whl.metadata (3.7 kB) 01:06:23 Using cached Markdown-3.7-py3-none-any.whl (106 kB) 01:06:23 Using cached importlib_metadata-8.5.0-py3-none-any.whl (26 kB) 01:06:23 Using cached zipp-3.20.2-py3-none-any.whl (9.2 kB) 01:06:23 Installing collected packages: zipp, importlib-metadata, markdown 01:06:23 Successfully installed importlib-metadata-8.5.0 markdown-3.7 zipp-3.20.2 01:06:23 + pip install mox3 pytest pytest-django pytest-xdist pytest-mock 01:06:23 Collecting mox3 01:06:24 Using cached mox3-1.1.0-py3-none-any.whl.metadata (3.2 kB) 01:06:24 Collecting pytest 01:06:24 Using cached pytest-8.3.3-py3-none-any.whl.metadata (7.5 kB) 01:06:24 Collecting pytest-django 01:06:24 Using cached pytest_django-4.9.0-py3-none-any.whl.metadata (8.2 kB) 01:06:24 Collecting pytest-xdist 01:06:24 Using cached pytest_xdist-3.6.1-py3-none-any.whl.metadata (4.3 kB) 01:06:24 Collecting pytest-mock 01:06:24 Using cached pytest_mock-3.14.0-py3-none-any.whl.metadata (3.8 kB) 01:06:24 Collecting pbr!=2.1.0,>=2.0.0 (from mox3) 01:06:24 Using cached pbr-6.1.0-py2.py3-none-any.whl.metadata (3.4 kB) 01:06:24 Collecting fixtures>=3.0.0 (from mox3) 01:06:24 Using cached fixtures-4.1.0-py3-none-any.whl.metadata (21 kB) 01:06:24 Collecting iniconfig (from pytest) 01:06:24 Using cached iniconfig-2.0.0-py3-none-any.whl.metadata (2.6 kB) 01:06:24 Collecting packaging (from pytest) 01:06:24 Using cached packaging-24.1-py3-none-any.whl.metadata (3.2 kB) 01:06:24 Collecting pluggy<2,>=1.5 (from pytest) 01:06:24 Using cached pluggy-1.5.0-py3-none-any.whl.metadata (4.8 kB) 01:06:24 Collecting exceptiongroup>=1.0.0rc8 (from pytest) 01:06:24 Using cached exceptiongroup-1.2.2-py3-none-any.whl.metadata (6.6 kB) 01:06:25 Collecting tomli>=1 (from pytest) 01:06:25 Using cached tomli-2.0.2-py3-none-any.whl.metadata (10.0 kB) 01:06:25 Collecting execnet>=2.1 (from pytest-xdist) 01:06:25 Using cached execnet-2.1.1-py3-none-any.whl.metadata (2.9 kB) 01:06:25 Using cached mox3-1.1.0-py3-none-any.whl (43 kB) 01:06:25 Using cached pytest-8.3.3-py3-none-any.whl (342 kB) 01:06:25 Using cached pytest_django-4.9.0-py3-none-any.whl (23 kB) 01:06:25 Using cached pytest_xdist-3.6.1-py3-none-any.whl (46 kB) 01:06:25 Using cached pytest_mock-3.14.0-py3-none-any.whl (9.9 kB) 01:06:25 Using cached exceptiongroup-1.2.2-py3-none-any.whl (16 kB) 01:06:25 Using cached execnet-2.1.1-py3-none-any.whl (40 kB) 01:06:25 Using cached fixtures-4.1.0-py3-none-any.whl (64 kB) 01:06:25 Using cached pbr-6.1.0-py2.py3-none-any.whl (108 kB) 01:06:25 Using cached pluggy-1.5.0-py3-none-any.whl (20 kB) 01:06:25 Using cached tomli-2.0.2-py3-none-any.whl (13 kB) 01:06:25 Using cached iniconfig-2.0.0-py3-none-any.whl (5.9 kB) 01:06:25 Using cached packaging-24.1-py3-none-any.whl (53 kB) 01:06:25 Installing collected packages: tomli, pluggy, pbr, packaging, iniconfig, execnet, exceptiongroup, pytest, fixtures, pytest-xdist, pytest-mock, pytest-django, mox3 01:06:26 Successfully installed exceptiongroup-1.2.2 execnet-2.1.1 fixtures-4.1.0 iniconfig-2.0.0 mox3-1.1.0 packaging-24.1 pbr-6.1.0 pluggy-1.5.0 pytest-8.3.3 pytest-django-4.9.0 pytest-mock-3.14.0 pytest-xdist-3.6.1 tomli-2.0.2 01:06:26 + pip install tables 01:06:26 Collecting tables 01:06:26 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB) 01:06:27 Collecting numpy>=1.19.0 (from tables) 01:06:27 Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (60 kB) 01:06:27 Collecting numexpr>=2.6.2 (from tables) 01:06:27 Using cached numexpr-2.10.1-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (1.2 kB) 01:06:27 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from tables) (24.1) 01:06:27 Collecting py-cpuinfo (from tables) 01:06:27 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes) 01:06:27 Collecting blosc2>=2.3.0 (from tables) 01:06:27 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB) 01:06:27 Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables) 01:06:28 Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.4 kB) 01:06:28 Collecting msgpack (from blosc2>=2.3.0->tables) 01:06:28 Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.4 kB) 01:06:28 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB) 01:06:28 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB) 01:06:28 Using cached numexpr-2.10.1-cp39-cp39-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (404 kB) 01:06:28 Using cached numpy-2.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (19.5 MB) 01:06:29 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB) 01:06:29 Using cached ndindex-1.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (478 kB) 01:06:29 Using cached msgpack-1.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (377 kB) 01:06:29 Installing collected packages: py-cpuinfo, numpy, ndindex, msgpack, numexpr, blosc2, tables 01:06:32 Successfully installed blosc2-2.5.1 msgpack-1.1.0 ndindex-1.9.2 numexpr-2.10.1 numpy-2.0.2 py-cpuinfo-9.0.0 tables-3.9.2 01:06:32 + pip install jinja2 01:06:33 Collecting jinja2 01:06:33 Using cached jinja2-3.1.4-py3-none-any.whl.metadata (2.6 kB) 01:06:33 Collecting MarkupSafe>=2.0 (from jinja2) 01:06:33 Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.0 kB) 01:06:33 Using cached jinja2-3.1.4-py3-none-any.whl (133 kB) 01:06:33 Using cached MarkupSafe-3.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB) 01:06:33 Installing collected packages: MarkupSafe, jinja2 01:06:33 Successfully installed MarkupSafe-3.0.2 jinja2-3.1.4 01:06:33 + pip install PyYAML 01:06:34 Collecting PyYAML 01:06:34 Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) 01:06:34 Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) 01:06:34 Installing collected packages: PyYAML 01:06:34 Successfully installed PyYAML-6.0.2 01:06:34 + pip install omero-py omero-web 01:06:35 Collecting omero-py 01:06:35 Using cached omero_py-5.19.5-py3-none-any.whl.metadata (6.3 kB) 01:06:35 Collecting omero-web 01:06:35 Using cached omero_web-5.27.2-py3-none-any.whl.metadata (6.4 kB) 01:06:35 Collecting urllib3<2 (from omero-py) 01:06:35 Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) 01:06:35 Collecting appdirs (from omero-py) 01:06:35 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB) 01:06:35 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0) 01:06:36 Collecting numpy<2 (from omero-py) 01:06:36 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB) 01:06:36 Collecting Pillow>=10.0.0 (from omero-py) 01:06:36 Using cached pillow-11.0.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.1 kB) 01:06:36 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py) (6.0.2) 01:06:36 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5) 01:06:36 Collecting requests (from omero-py) 01:06:36 Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) 01:06:36 Collecting portalocker (from omero-py) 01:06:36 Using cached portalocker-2.10.1-py3-none-any.whl.metadata (8.5 kB) 01:06:36 Collecting concurrent-log-handler>=0.9.20 (from omero-web) 01:06:36 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB) 01:06:37 Collecting Django<4.3,>=4.2.3 (from omero-web) 01:06:37 Using cached Django-4.2.16-py3-none-any.whl.metadata (4.1 kB) 01:06:37 Collecting django-pipeline==2.1.0 (from omero-web) 01:06:37 Using cached django_pipeline-2.1.0-py3-none-any.whl.metadata (12 kB) 01:06:37 Collecting django-cors-headers==3.7.0 (from omero-web) 01:06:37 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB) 01:06:37 Collecting whitenoise>=5.3.0 (from omero-web) 01:06:37 Using cached whitenoise-6.7.0-py3-none-any.whl.metadata (3.7 kB) 01:06:37 Collecting gunicorn>=19.3 (from omero-web) 01:06:37 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB) 01:06:37 Collecting omero-marshal>=0.7.0 (from omero-web) 01:06:37 Using cached omero_marshal-0.9.0-py3-none-any.whl.metadata (2.2 kB) 01:06:37 Collecting pytz (from omero-web) 01:06:37 Using cached pytz-2024.2-py2.py3-none-any.whl.metadata (22 kB) 01:06:37 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web) (24.1) 01:06:37 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web) 01:06:37 Using cached asgiref-3.8.1-py3-none-any.whl.metadata (9.3 kB) 01:06:37 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web) 01:06:37 Using cached sqlparse-0.5.1-py3-none-any.whl.metadata (3.9 kB) 01:06:38 Collecting charset-normalizer<4,>=2 (from requests->omero-py) 01:06:38 Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) 01:06:38 Collecting idna<4,>=2.5 (from requests->omero-py) 01:06:38 Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) 01:06:38 Collecting certifi>=2017.4.17 (from requests->omero-py) 01:06:38 Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) 01:06:38 Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web) 01:06:38 Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) 01:06:38 Using cached omero_py-5.19.5-py3-none-any.whl (2.8 MB) 01:06:38 Using cached omero_web-5.27.2-py3-none-any.whl (2.8 MB) 01:06:38 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB) 01:06:38 Using cached django_pipeline-2.1.0-py3-none-any.whl (38 kB) 01:06:38 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB) 01:06:38 Using cached Django-4.2.16-py3-none-any.whl (8.0 MB) 01:06:38 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB) 01:06:38 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB) 01:06:39 Using cached omero_marshal-0.9.0-py3-none-any.whl (88 kB) 01:06:39 Using cached pillow-11.0.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.4 MB) 01:06:40 Using cached portalocker-2.10.1-py3-none-any.whl (18 kB) 01:06:40 Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) 01:06:40 Using cached whitenoise-6.7.0-py3-none-any.whl (19 kB) 01:06:40 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB) 01:06:40 Using cached pytz-2024.2-py2.py3-none-any.whl (508 kB) 01:06:40 Using cached requests-2.32.3-py3-none-any.whl (64 kB) 01:06:40 Using cached asgiref-3.8.1-py3-none-any.whl (23 kB) 01:06:40 Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) 01:06:40 Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) 01:06:40 Using cached idna-3.10-py3-none-any.whl (70 kB) 01:06:40 Using cached sqlparse-0.5.1-py3-none-any.whl (44 kB) 01:06:40 Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) 01:06:41 Installing collected packages: pytz, django-pipeline, appdirs, whitenoise, urllib3, typing-extensions, sqlparse, portalocker, Pillow, omero-marshal, numpy, idna, gunicorn, charset-normalizer, certifi, requests, concurrent-log-handler, asgiref, omero-py, Django, django-cors-headers, omero-web 01:06:42 Attempting uninstall: numpy 01:06:42 Found existing installation: numpy 2.0.2 01:06:42 Uninstalling numpy-2.0.2: 01:06:42 Successfully uninstalled numpy-2.0.2 01:06:49 Successfully installed Django-4.2.16 Pillow-11.0.0 appdirs-1.4.4 asgiref-3.8.1 certifi-2024.8.30 charset-normalizer-3.4.0 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-pipeline-2.1.0 gunicorn-23.0.0 idna-3.10 numpy-1.26.4 omero-marshal-0.9.0 omero-py-5.19.5 omero-web-5.27.2 portalocker-2.10.1 pytz-2024.2 requests-2.32.3 sqlparse-0.5.1 typing-extensions-4.12.2 urllib3-1.26.20 whitenoise-6.7.0 01:06:49 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins21541291586645220.sh 01:06:49 + source /home/settings.env 01:06:49 ++ OMERO_DB_HOST=pg 01:06:49 ++ OMERO_DB_USER=postgres 01:06:49 ++ OMERO_DB_PASS= 01:06:49 ++ OMERO_ROOT_PASS=omero 01:06:49 ++ OMERO_DATA_DIR=/OMERO 01:06:49 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 01:06:49 + OMERO_DB_NAME=OMERO-test-integration 01:06:49 + SRC=/home/omero/workspace/OMERO-test-integration/src 01:06:49 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist 01:06:49 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist 01:06:49 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist 01:06:49 + '[' -e /home/omero/workspace/OMERO-test-integration/src/dist ']' 01:06:49 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate 01:06:49 ++ deactivate nondestructive 01:06:49 ++ '[' -n '' ']' 01:06:49 ++ '[' -n '' ']' 01:06:49 ++ '[' -n /bin/bash -o -n '' ']' 01:06:49 ++ hash -r 01:06:49 ++ '[' -n '' ']' 01:06:49 ++ unset VIRTUAL_ENV 01:06:49 ++ '[' '!' nondestructive = nondestructive ']' 01:06:49 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3 01:06:49 ++ export VIRTUAL_ENV 01:06:49 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:06:49 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:06:49 ++ export PATH 01:06:49 ++ '[' -n '' ']' 01:06:49 ++ '[' -z '' ']' 01:06:49 ++ _OLD_VIRTUAL_PS1= 01:06:49 ++ PS1='(.venv3) ' 01:06:49 ++ export PS1 01:06:49 ++ '[' -n /bin/bash -o -n '' ']' 01:06:49 ++ hash -r 01:06:49 + omero admin stop 01:06:51 Waiting on shutdown. Use CTRL-C to exit 01:06:51 .+ deactivate 01:07:01 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']' 01:07:01 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:07:01 + export PATH 01:07:01 + unset _OLD_VIRTUAL_PATH 01:07:01 + '[' -n '' ']' 01:07:01 + '[' -n /bin/bash -o -n '' ']' 01:07:01 + hash -r 01:07:01 + '[' -n '' ']' 01:07:01 + unset VIRTUAL_ENV 01:07:01 + '[' '!' '' = nondestructive ']' 01:07:01 + unset -f deactivate 01:07:01 + sleep 5 01:07:06 + dropdb -f -h pg -U postgres OMERO-test-integration 01:07:09 + rm -rf /home/omero/workspace/OMERO-test-integration/config /home/omero/workspace/OMERO-test-integration/data /home/omero/workspace/OMERO-test-integration/omero-blitz-5.7.5-SNAPSHOT-python.zip /home/omero/workspace/OMERO-test-integration/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_py-5.19.6.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_scripts-5.8.4.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/omero_web-5.27.3.dev0.tar.gz /home/omero/workspace/OMERO-test-integration/src /home/omero/workspace/OMERO-test-integration/version.properties 01:07:09 Copied 1 artifact from "OMERO-build" build number 214 01:07:10 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 211 01:07:10 Copied 2 artifacts from "OMERO-build-build" build number 222 01:07:10 [OMERO-test-integration] $ /bin/bash -xe /tmp/jenkins13744323007072805623.sh 01:07:10 + source /home/settings.env 01:07:10 ++ OMERO_DB_HOST=pg 01:07:10 ++ OMERO_DB_USER=postgres 01:07:10 ++ OMERO_DB_PASS= 01:07:10 ++ OMERO_ROOT_PASS=omero 01:07:10 ++ OMERO_DATA_DIR=/OMERO 01:07:10 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 01:07:10 + export ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip 01:07:10 + ZIP_FILE=/home/omero/workspace/OMERO-test-integration/omero-blitz-VERSION-python.zip 01:07:10 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties 01:07:10 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-test-integration/version.properties 01:07:10 + OMERO_DB_NAME=OMERO-test-integration 01:07:10 + OMERO_DATA_DIR=/home/omero/workspace/OMERO-test-integration/data 01:07:10 + mkdir -p /home/omero/workspace/OMERO-test-integration/data 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inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql 01:07:10 creating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/ 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/psql-footer.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/psql-header.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/schema.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/sql/psql/OMERO5.4__0/views.sql 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/test.xml 01:07:10 inflating: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/update_dependencies.sh 01:07:10 extracting: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/components/antlib/resources/gitversion.xml 01:07:10 extracting: openmicroscopy-5.6.3-513-75ed6e6d79-ice36/components/tools/OmeroCpp/cmake/GitVersion.cmake 01:07:10 + rm -f openmicroscopy-5.6.3-513-75ed6e6d79-ice36.zip 01:07:10 + mv /home/omero/workspace/OMERO-test-integration/openmicroscopy-5.6.3-513-75ed6e6d79-ice36 /home/omero/workspace/OMERO-test-integration/src 01:07:10 + source /home/omero/workspace/OMERO-test-integration/.venv3/bin/activate 01:07:10 ++ deactivate nondestructive 01:07:10 ++ '[' -n '' ']' 01:07:10 ++ '[' -n '' ']' 01:07:10 ++ '[' -n /bin/bash -o -n '' ']' 01:07:10 ++ hash -r 01:07:10 ++ '[' -n '' ']' 01:07:10 ++ unset VIRTUAL_ENV 01:07:10 ++ '[' '!' nondestructive = nondestructive ']' 01:07:10 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-test-integration/.venv3 01:07:10 ++ export VIRTUAL_ENV 01:07:10 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:07:10 ++ PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:07:10 ++ export PATH 01:07:10 ++ '[' -n '' ']' 01:07:10 ++ '[' -z '' ']' 01:07:10 ++ _OLD_VIRTUAL_PS1= 01:07:10 ++ PS1='(.venv3) ' 01:07:10 ++ export PS1 01:07:10 ++ '[' -n /bin/bash -o -n '' ']' 01:07:10 ++ hash -r 01:07:10 + for x in *.tar.gz 01:07:10 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz 01:07:10 Processing ./omero_dropbox-5.7.1.dev0.tar.gz 01:07:10 Installing build dependencies: started 01:07:13 Installing build dependencies: finished with status 'done' 01:07:13 Getting requirements to build wheel: started 01:07:13 Getting requirements to build wheel: finished with status 'done' 01:07:13 Preparing metadata (pyproject.toml): started 01:07:13 Preparing metadata (pyproject.toml): finished with status 'done' 01:07:13 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.7.1.dev0) (5.19.5) 01:07:13 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.20) 01:07:13 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4) 01:07:13 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0) 01:07:13 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.4) 01:07:13 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (11.0.0) 01:07:13 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.2) 01:07:13 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5) 01:07:13 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.3) 01:07:13 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.10.1) 01:07:13 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.0) 01:07:13 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.10) 01:07:13 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2024.8.30) 01:07:13 Building wheels for collected packages: omero-dropbox 01:07:13 Building wheel for omero-dropbox (pyproject.toml): started 01:07:14 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done' 01:07:14 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49058 sha256=b9f36780141ead4c22d71e31a3e2a67e42138d50c3bd7407c37280066f86135b 01:07:14 Stored in directory: /home/omero/.cache/pip/wheels/ef/93/2d/d44d5be6e4d9a58eecdbeb6e3385179e95ae7b80719377e781 01:07:14 Successfully built omero-dropbox 01:07:14 Installing collected packages: omero-dropbox 01:07:14 Successfully installed omero-dropbox-5.7.1.dev0 01:07:14 + for x in *.tar.gz 01:07:14 + pip install -U omero_marshal-0.9.1.dev0.tar.gz 01:07:14 Processing ./omero_marshal-0.9.1.dev0.tar.gz 01:07:14 Installing build dependencies: started 01:07:16 Installing build dependencies: finished with status 'done' 01:07:16 Getting requirements to build wheel: started 01:07:16 Getting requirements to build wheel: finished with status 'done' 01:07:16 Preparing metadata (pyproject.toml): started 01:07:17 Preparing metadata (pyproject.toml): finished with status 'done' 01:07:17 Building wheels for collected packages: omero_marshal 01:07:17 Building wheel for omero_marshal (pyproject.toml): started 01:07:17 Building wheel for omero_marshal (pyproject.toml): finished with status 'done' 01:07:17 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88031 sha256=4c9bf3e15e27016ec989f73be26c398b5257bc26e00a472a2fae043aa767732e 01:07:17 Stored in directory: /home/omero/.cache/pip/wheels/1a/3a/cd/b39392f5c8ba80a35bab4a0f80f93c7c4729cce6868750f4f3 01:07:17 Successfully built omero_marshal 01:07:17 Installing collected packages: omero_marshal 01:07:17 Attempting uninstall: omero_marshal 01:07:17 Found existing installation: omero-marshal 0.9.0 01:07:17 Uninstalling omero-marshal-0.9.0: 01:07:17 Successfully uninstalled omero-marshal-0.9.0 01:07:17 Successfully installed omero_marshal-0.9.1.dev0 01:07:17 + for x in *.tar.gz 01:07:17 + pip install -U omero_py-5.19.6.dev0.tar.gz 01:07:18 Processing ./omero_py-5.19.6.dev0.tar.gz 01:07:18 Installing build dependencies: started 01:07:20 Installing build dependencies: finished with status 'done' 01:07:20 Getting requirements to build wheel: started 01:07:20 Getting requirements to build wheel: finished with status 'done' 01:07:20 Preparing metadata (pyproject.toml): started 01:07:21 Preparing metadata (pyproject.toml): finished with status 'done' 01:07:21 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.26.20) 01:07:21 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.4.4) 01:07:21 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.0.0) 01:07:21 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (1.26.4) 01:07:21 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (11.0.0) 01:07:21 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (6.0.2) 01:07:21 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (3.6.5) 01:07:21 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (2.32.3) 01:07:21 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.6.dev0) (2.10.1) 01:07:21 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.6.dev0) (3.4.0) 01:07:21 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.6.dev0) (3.10) 01:07:21 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.6.dev0) (2024.8.30) 01:07:21 Building wheels for collected packages: omero-py 01:07:21 Building wheel for omero-py (pyproject.toml): started 01:07:22 Building wheel for omero-py (pyproject.toml): finished with status 'done' 01:07:22 Created wheel for omero-py: filename=omero_py-5.19.6.dev0-py3-none-any.whl size=2783246 sha256=5b5398aa7821f32d41a95e49a731e8106c95f2219f2c567942a245e7df1a916e 01:07:22 Stored in directory: /home/omero/.cache/pip/wheels/0e/51/53/0205c66cdbe856d4da23e6b9c5d613133b733ef358e57fa643 01:07:22 Successfully built omero-py 01:07:22 Installing collected packages: omero-py 01:07:22 Attempting uninstall: omero-py 01:07:22 Found existing installation: omero-py 5.19.5 01:07:22 Uninstalling omero-py-5.19.5: 01:07:23 Successfully uninstalled omero-py-5.19.5 01:07:25 Successfully installed omero-py-5.19.6.dev0 01:07:25 + for x in *.tar.gz 01:07:25 + pip install -U omero_scripts-5.8.4.dev0.tar.gz 01:07:25 Processing ./omero_scripts-5.8.4.dev0.tar.gz 01:07:25 Installing build dependencies: started 01:07:27 Installing build dependencies: finished with status 'done' 01:07:27 Getting requirements to build wheel: started 01:07:27 Getting requirements to build wheel: finished with status 'done' 01:07:27 Preparing metadata (pyproject.toml): started 01:07:27 Preparing metadata (pyproject.toml): finished with status 'done' 01:07:27 Building wheels for collected packages: omero-scripts 01:07:27 Building wheel for omero-scripts (pyproject.toml): started 01:07:28 Building wheel for omero-scripts (pyproject.toml): finished with status 'done' 01:07:28 Created wheel for omero-scripts: filename=omero_scripts-5.8.4.dev0-py3-none-any.whl size=116645 sha256=2bda5159a5c068503b2e67929ec0fe376062d2435a8d92774910c83674dd796e 01:07:28 Stored in directory: /home/omero/.cache/pip/wheels/28/3e/92/6522b883548147569f7375ed3132e6964d3645235d0b7e283f 01:07:28 Successfully built omero-scripts 01:07:28 Installing collected packages: omero-scripts 01:07:28 Successfully installed omero-scripts-5.8.4.dev0 01:07:28 + for x in *.tar.gz 01:07:28 + pip install -U omero_web-5.27.3.dev0.tar.gz 01:07:28 Processing ./omero_web-5.27.3.dev0.tar.gz 01:07:29 Installing build dependencies: started 01:07:31 Installing build dependencies: finished with status 'done' 01:07:31 Getting requirements to build wheel: started 01:07:31 Getting requirements to build wheel: finished with status 'done' 01:07:31 Preparing metadata (pyproject.toml): started 01:07:31 Preparing metadata (pyproject.toml): finished with status 'done' 01:07:31 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (5.19.6.dev0) 01:07:31 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (0.9.25) 01:07:31 Requirement already satisfied: Django<4.3,>=4.2.3 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (4.2.16) 01:07:31 Requirement already satisfied: django-pipeline==2.1.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (2.1.0) 01:07:31 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (3.7.0) 01:07:31 Collecting django-csp (from omero-web==5.27.3.dev0) 01:07:31 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB) 01:07:31 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (6.7.0) 01:07:31 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (23.0.0) 01:07:31 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (0.9.1.dev0) 01:07:31 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (11.0.0) 01:07:31 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (2024.2) 01:07:31 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (2.10.1) 01:07:31 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.27.3.dev0) (24.1) 01:07:31 Requirement already satisfied: asgiref<4,>=3.6.0 in ./.venv3/lib/python3.9/site-packages (from Django<4.3,>=4.2.3->omero-web==5.27.3.dev0) (3.8.1) 01:07:31 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib/python3.9/site-packages (from Django<4.3,>=4.2.3->omero-web==5.27.3.dev0) (0.5.1) 01:07:31 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.26.20) 01:07:31 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.4.4) 01:07:31 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.0.0) 01:07:31 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (1.26.4) 01:07:31 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (6.0.2) 01:07:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (3.6.5) 01:07:31 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.27.3.dev0) (2.32.3) 01:07:31 Requirement already satisfied: typing-extensions>=4 in ./.venv3/lib/python3.9/site-packages (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.27.3.dev0) (4.12.2) 01:07:31 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.27.3.dev0) (3.4.0) 01:07:31 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.27.3.dev0) (3.10) 01:07:31 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.27.3.dev0) (2024.8.30) 01:07:32 Using cached django_csp-3.8-py3-none-any.whl (17 kB) 01:07:32 Building wheels for collected packages: omero-web 01:07:32 Building wheel for omero-web (pyproject.toml): started 01:07:33 Building wheel for omero-web (pyproject.toml): finished with status 'done' 01:07:33 Created wheel for omero-web: filename=omero_web-5.27.3.dev0-py3-none-any.whl size=2766670 sha256=428eda79ce11a7f7666434ff2662694655b53798b8b6c6eb06d5ca5d41993b5b 01:07:33 Stored in directory: /home/omero/.cache/pip/wheels/f0/b3/64/dc77f8e1a2385b2f8ef248e63a59b8ba8d51c2c928e147e9d6 01:07:33 Successfully built omero-web 01:07:33 Installing collected packages: django-csp, omero-web 01:07:34 Attempting uninstall: omero-web 01:07:34 Found existing installation: omero-web 5.27.2 01:07:34 Uninstalling omero-web-5.27.2: 01:07:34 Successfully uninstalled omero-web-5.27.2 01:07:34 Successfully installed django-csp-3.8 omero-web-5.27.3.dev0 01:07:35 + pip install omero-certificates 01:07:35 Collecting omero-certificates 01:07:35 Using cached omero_certificates-0.3.2-py3-none-any.whl.metadata (3.7 kB) 01:07:35 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.6.dev0) 01:07:35 Collecting distro==1.8.0 (from omero-certificates) 01:07:35 Using cached distro-1.8.0-py3-none-any.whl.metadata (6.9 kB) 01:07:35 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.20) 01:07:35 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4) 01:07:35 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0) 01:07:35 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4) 01:07:35 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (11.0.0) 01:07:35 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.2) 01:07:35 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5) 01:07:35 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.3) 01:07:35 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.10.1) 01:07:35 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.0) 01:07:35 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.10) 01:07:35 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2024.8.30) 01:07:35 Using cached omero_certificates-0.3.2-py3-none-any.whl (13 kB) 01:07:35 Using cached distro-1.8.0-py3-none-any.whl (20 kB) 01:07:36 Installing collected packages: distro, omero-certificates 01:07:36 Successfully installed distro-1.8.0 omero-certificates-0.3.2 01:07:36 + for x in omero-cli-duplicate 01:07:36 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate 01:07:36 Collecting omero-cli-duplicate 01:07:36 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-926juzop/omero-cli-duplicate_5467facaa7eb4c69a988ea041c3ab049 01:07:36 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-926juzop/omero-cli-duplicate_5467facaa7eb4c69a988ea041c3ab049 01:07:37 Running command git checkout -b merge_ci --track origin/merge_ci 01:07:37 Switched to a new branch 'merge_ci' 01:07:37 branch 'merge_ci' set up to track 'origin/merge_ci'. 01:07:37 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 0b078cd4bd16b51bf8212680bc6059a0834b63be 01:07:37 Installing build dependencies: started 01:07:39 Installing build dependencies: finished with status 'done' 01:07:39 Getting requirements to build wheel: started 01:07:39 Getting requirements to build wheel: finished with status 'done' 01:07:39 Preparing metadata (pyproject.toml): started 01:07:39 Preparing metadata (pyproject.toml): finished with status 'done' 01:07:39 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.6.dev0) 01:07:39 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.20) 01:07:39 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4) 01:07:39 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0) 01:07:39 Requirement already satisfied: numpy<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4) 01:07:39 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (11.0.0) 01:07:39 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.2) 01:07:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5) 01:07:39 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.3) 01:07:39 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.10.1) 01:07:40 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.0) 01:07:40 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.10) 01:07:40 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2024.8.30) 01:07:40 Building wheels for collected packages: omero-cli-duplicate 01:07:40 Building wheel for omero-cli-duplicate (pyproject.toml): started 01:07:40 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done' 01:07:40 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11442 sha256=357f744930983c5c65aaca49e113478e0273643ffedb7770f333c9f648a63172 01:07:40 Stored in directory: /tmp/pip-ephem-wheel-cache-l5bqpgmw/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84 01:07:40 Successfully built omero-cli-duplicate 01:07:40 Installing collected packages: omero-cli-duplicate 01:07:40 Successfully installed omero-cli-duplicate-0.4.1.dev0 01:07:40 + source /home/omero/workspace/OMERO-test-integration/src/docs/hudson/functions.sh 01:07:40 + /home/omero/workspace/OMERO-test-integration/src/build.py build-default test-compile 01:07:40 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 01:07:40 Buildfile: /home/omero/workspace/OMERO-test-integration/src/build.xml 01:07:41 01:07:41 check-ivy: 01:07:41 Creating /home/omero/workspace/OMERO-test-integration/src/etc/local.properties 01:07:41 Created dir: /home/omero/workspace/OMERO-test-integration/src/target 01:07:41 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ :: 01:07:41 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:07:42 01:07:42 build-scons: 01:07:42 Expanding: /home/omero/workspace/OMERO-test-integration/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-test-integration/src/target/scons 01:07:42 01:07:42 build: 01:07:42 No sub-builds to iterate on 01:07:42 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb... 01:07:42 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb... 01:07:42 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS... 01:07:42 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava... 01:07:42 01:07:42 tools-init: 01:07:42 no-op 01:07:42 01:07:42 retrieve: 01:07:42 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ :: 01:07:42 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:07:42 WARNING: An illegal reflective access operation has occurred 01:07:42 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-test-integration/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator 01:07:42 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator 01:07:42 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations 01:07:42 WARNING: All illegal access operations will be denied in a future release 01:07:58 01:07:58 prepare: 01:07:58 Preparing: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs 01:07:58 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/.done 01:07:58 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/src 01:07:58 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources 01:07:58 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes 01:07:58 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes 01:07:58 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/reports 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources 01:07:58 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes 01:07:58 01:07:58 pre-compile: 01:07:58 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes 01:07:58 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes 01:07:58 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes 01:07:58 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes 01:07:58 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated-classes 01:07:58 01:07:58 compile: 01:07:58 no-op 01:07:58 01:07:58 package: 01:07:58 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/omero_client.jar 01:07:59 01:07:59 install: 01:07:59 :: delivering :: omero#omero_client;working@bdaf9f08f5d1 :: 5.6.3-513-75ed6e6d79-ice36-ice36 :: integration :: Thu Oct 24 01:07:42 UTC 2024 01:07:59 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/ivy.xml 01:07:59 :: publishing :: omero#omero_client 01:07:59 published omero_client to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-513-75ed6e6d79-ice36-ice36/omero_client-5.6.3-513-75ed6e6d79-ice36-ice36.jar 01:07:59 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/repository/omero/omero_client/5.6.3-513-75ed6e6d79-ice36-ice36/omero_client-5.6.3-513-75ed6e6d79-ice36-ice36.xml 01:07:59 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 01:07:59 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 01:07:59 01:07:59 retrieve: 01:07:59 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ :: 01:07:59 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:07:59 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools... 01:07:59 01:07:59 dist: 01:07:59 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/service-classes/META-INF 01:07:59 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/server 01:07:59 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts 01:07:59 Expanding: /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts/omero_scripts-5.8.4.dev0.tar.gz into /home/omero/workspace/OMERO-test-integration/src/components/tools/target/downloads/scripts 01:07:59 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/target/lib/scripts 01:07:59 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/dist 01:07:59 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-test-integration/src/dist 01:07:59 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests... 01:07:59 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui... 01:08:00 01:08:00 copy-licenses: 01:08:00 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist 01:08:00 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/share 01:08:00 Copying 44 files to /home/omero/workspace/OMERO-test-integration/src/dist/share 01:08:00 01:08:00 copy-history: 01:08:00 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist 01:08:00 01:08:00 copy-etc: 01:08:00 Copying 28 files to /home/omero/workspace/OMERO-test-integration/src/dist/etc 01:08:00 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc/templates 01:08:00 01:08:00 copy-sql: 01:08:00 Copying 60 files to /home/omero/workspace/OMERO-test-integration/src/dist 01:08:03 01:08:03 copy-server: 01:08:03 conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/server/janino.jar in [server]: 3.0.11 won 01:08:03 01:08:03 copy-client: 01:08:03 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/client 01:08:04 conflict on /home/omero/workspace/OMERO-test-integration/src/dist/lib/client/janino.jar in [client]: 3.0.11 won 01:08:04 01:08:04 update-version: 01:08:04 Copying 1 file to /home/omero/workspace/OMERO-test-integration/src/dist/etc 01:08:04 01:08:04 create-workdirs: 01:08:04 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/etc/grid 01:08:04 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/var 01:08:04 01:08:04 copy-luts: 01:08:04 Created dir: /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts 01:08:04 Copying 39 files to /home/omero/workspace/OMERO-test-integration/src/dist/lib/scripts/luts 01:08:04 01:08:04 test-compile: 01:08:04 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS... 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb... 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb... 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tests/ui... 01:08:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava... 01:08:05 01:08:05 testng-init: 01:08:05 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ :: 01:08:05 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:08:08 01:08:07,993 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 01:08:08 01:08:07,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - No custom configurators were discovered as a service. 01:08:08 01:08:07,996 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator 01:08:08 01:08:08,002 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator 01:08:08 01:08:08,003 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] 01:08:08 01:08:08,003 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] 01:08:08 01:08:08,005 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY 01:08:08 01:08:08,005 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator 01:08:08 01:08:08,006 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator 01:08:08 01:08:08,007 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] 01:08:08 01:08:08,007 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 01:08:08 01:08:08,008 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@373636f3 - Resource [logback.xml] occurs multiple times on the classpath. 01:08:08 01:08:08,008 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@373636f3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 01:08:08 01:08:08,008 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@373636f3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml] 01:08:08 01:08:08,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr] 01:08:08 01:08:08,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] 01:08:08 01:08:08,288 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property 01:08:08 01:08:08,291 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2ca413f6 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender. 01:08:08 01:08:08,291 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2ca413f6 - Please move "immediateFlush" property into the enclosing appender. 01:08:08 01:08:08,358 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2ca413f6 - Setting the "immediateFlush" property of the enclosing appender to true 01:08:08 01:08:08,358 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR 01:08:08 01:08:08,359 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR 01:08:08 01:08:08,359 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR 01:08:08 01:08:08,359 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR 01:08:08 01:08:08,359 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN 01:08:08 01:08:08,359 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT] 01:08:08 01:08:08,360 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@66e478c7 - End of configuration. 01:08:08 01:08:08,362 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1a35f99a - Registering current configuration as safe fallback point 01:08:08 01:08:08,362 |-INFO in ch.qos.logback.classic.util.ContextInitializer@196ca821 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 356 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY 01:08:08 01:08:08 lifecycle.test-compile: 01:08:08 Copying 3 files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes 01:08:08 Compiling 85 source files to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/test-classes 01:08:08 warning: [options] bootstrap class path not set in conjunction with -source 8 01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:10 import omero.grid.RawAccessRequest; 01:08:10 ^ 01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:10 import omero.grid.RawAccessRequest; 01:08:10 ^ 01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:10 import omero.grid.RawAccessRequest; 01:08:10 ^ 01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated 01:08:10 import omero.model.ImportJob; 01:08:10 ^ 01:08:10 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated 01:08:10 import omero.model.ImportJobI; 01:08:10 ^ 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated 01:08:11 IObject link = (IObject) linkClass.newInstance(); 01:08:11 ^ 01:08:11 where T is a type-variable: 01:08:11 T extends Object declared in class Class 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated 01:08:11 T copy = (T) obj.getClass().newInstance(); 01:08:11 ^ 01:08:11 where T is a type-variable: 01:08:11 T extends Object declared in class Class 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:11 RawAccessRequest raw = new RawAccessRequest(); 01:08:11 ^ 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:11 RawAccessRequest raw = new RawAccessRequest(); 01:08:11 ^ 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated 01:08:11 raw.repoUuid = legacy.root().getHash().getValue(); 01:08:11 ^ 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated 01:08:11 raw.command = "rm"; 01:08:11 ^ 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated 01:08:11 raw.args = Arrays.asList(path); 01:08:11 ^ 01:08:11 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated 01:08:11 final IObject link = linkClass.newInstance(); 01:08:11 ^ 01:08:11 where T is a type-variable: 01:08:11 T extends Object declared in class Class 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated 01:08:12 originalLink.setChild(annotationClass.newInstance()); 01:08:12 ^ 01:08:12 where T is a type-variable: 01:08:12 T extends Object declared in class Class 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated 01:08:12 RoiResult r = svc.findByImage(id, new RoiOptions()); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:12 final RawAccessRequest request = new RawAccessRequest(); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:12 final RawAccessRequest request = new RawAccessRequest(); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated 01:08:12 request.repoUuid = repo.root().getHash().getValue(); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated 01:08:12 request.command = "exists"; 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated 01:08:12 request.args = Collections.singletonList(dirPath); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:12 final RawAccessRequest request = new RawAccessRequest(); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated 01:08:12 final RawAccessRequest request = new RawAccessRequest(); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated 01:08:12 request.repoUuid = repo.root().getHash().getValue(); 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated 01:08:12 request.command = "exists"; 01:08:12 ^ 01:08:12 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated 01:08:12 request.args = Collections.singletonList(dirName); 01:08:12 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated 01:08:13 final ImportJob importJob = new ImportJobI(); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated 01:08:13 final ImportJob importJob = new ImportJobI(); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated 01:08:13 importJob.setImageName(omero.rtypes.rstring(name)); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated 01:08:13 importJob.setImageDescription(omero.rtypes.rstring(desc)); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated 01:08:13 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated 01:08:13 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated 01:08:13 final String savedName = sent.getImageName().getValue().toString(); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated 01:08:13 final String savedDesc = sent.getImageDescription().getValue().toString(); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated 01:08:13 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated 01:08:13 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated 01:08:13 final String retrievedName = retrievedImportJob.getImageName().getValue().toString(); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated 01:08:13 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString(); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 RoiResult r = svc.findByImage(image.getId().getValue(), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 l = svc.getRoiMeasurements(image.getId().getValue(), options); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 l = svc.getRoiMeasurements(image.getId().getValue(), options); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated 01:08:13 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId() 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated 01:08:13 table = svc.getTable(f.getId().getValue()); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 RoiResult r = svc.findByImage(image.getId().getValue(), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions()); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated 01:08:13 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions()); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated 01:08:13 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions()); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated 01:08:13 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions()); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"}); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"}); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated 01:08:13 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0), 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated 01:08:13 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {}, 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated 01:08:13 svc.getShapeStatsRestricted( 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated 01:08:13 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0}); 01:08:13 ^ 01:08:13 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated 01:08:13 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy()); 01:08:13 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated 01:08:14 request.typesToIgnore = Collections.singletonList("TagAnnotation"); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated 01:08:14 request.typesToIgnore = Collections.singletonList("IAnnotationLink"); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated 01:08:14 request.typesToIgnore = Collections.singletonList("Annotation"); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated 01:08:14 request.typesToIgnore = Collections.singletonList("Annotation"); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated 01:08:14 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy()); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated 01:08:14 p2.setRelatedTo(p1); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated 01:08:14 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId()); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated 01:08:14 pixels1.setRelatedTo(pixels2); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated 01:08:14 Pixels pixels = pixels1.getRelatedTo(); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated 01:08:14 Assert.assertNull(pixels1.getRelatedTo()); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated 01:08:14 pixels1.setRelatedTo(pixels2); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated 01:08:14 Pixels pixels = pixels1.getRelatedTo(); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated 01:08:14 Assert.assertNull(pixels1.getRelatedTo()); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:14 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(), 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:14 l = svc.getRoiMeasurements(image.getId().getValue(), options); 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:14 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(), 01:08:14 ^ 01:08:14 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated 01:08:14 l = svc.getRoiMeasurements(image.getId().getValue(), options); 01:08:14 ^ 01:08:14 Note: Some input files use unchecked or unsafe operations. 01:08:14 Note: Recompile with -Xlint:unchecked for details. 01:08:14 88 warnings 01:08:14 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_566371656.tmp 01:08:14 Building jar: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.jar 01:08:14 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:08:14 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-513-75ed6e6d79-ice36-ice36 :: integration :: Thu Oct 24 01:08:04 UTC 2024 01:08:14 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml 01:08:14 :: publishing :: omero#OmeroJava-test 01:08:14 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-75ed6e6d79-ice36-ice36.jar 01:08:14 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-75ed6e6d79-ice36-ice36.xml 01:08:14 01:08:14 BUILD SUCCESSFUL 01:08:14 Total time: 33 seconds 01:08:14 + OMERO_DIST=/home/omero/workspace/OMERO-test-integration/src/dist 01:08:14 + export OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist 01:08:14 + OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist 01:08:14 + omero config set omero.db.name OMERO-test-integration 01:08:15 + omero config set omero.db.host pg 01:08:16 + omero config set omero.db.user postgres 01:08:17 + omero config set omero.db.poolsize 50 01:08:18 + omero config set omero.jvmcfg.max_system_memory.blitz 64000 01:08:19 + omero config set omero.data.dir /home/omero/workspace/OMERO-test-integration/data 01:08:20 + omero config set omero.ports.prefix 1 01:08:21 + omero config set omero.web.server_list '[["testintegration",14064,"testintegration"]]' 01:08:22 + omero certificates 01:08:23 OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022) 01:08:24 certificates created: /home/omero/workspace/OMERO-test-integration/data/certs/server.key /home/omero/workspace/OMERO-test-integration/data/certs/server.pem /home/omero/workspace/OMERO-test-integration/data/certs/server.p12 01:08:24 + createdb -h pg -U postgres OMERO-test-integration 01:08:25 + omero db script -f dbsetup.sql '' '' omero 01:08:25 WARNING: Positional arguments are deprecated 01:08:26 Using OMERO5.4 for version 01:08:26 Using 0 for patch 01:08:26 Using password from commandline 01:08:27 + psql -h pg -U postgres -d OMERO-test-integration -f dbsetup.sql 01:08:27 BEGIN 01:08:27 CREATE FUNCTION 01:08:27 CREATE FUNCTION 01:08:27 assert_db_server_prerequisites 01:08:27 -------------------------------- 01:08:27 01:08:27 (1 row) 01:08:27 01:08:27 DROP FUNCTION 01:08:27 DROP FUNCTION 01:08:27 CREATE DOMAIN 01:08:27 CREATE DOMAIN 01:08:27 CREATE DOMAIN 01:08:27 CREATE DOMAIN 01:08:27 CREATE DOMAIN 01:08:27 CREATE TYPE 01:08:27 CREATE TYPE 01:08:27 CREATE TYPE 01:08:27 CREATE TYPE 01:08:27 CREATE TYPE 01:08:27 CREATE TYPE 01:08:27 CREATE TYPE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:27 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 CREATE TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 psql:dbsetup.sql:2842: NOTICE: identifier "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkcontraststretchingcontext_codomainmapcontext_id_codomainmapco" 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 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01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 psql:dbsetup.sql:4712: NOTICE: identifier "fklogicalchannel_photometricinterpretation_photometricinterpretation" will be truncated to "fklogicalchannel_photometricinterpretation_photometricinterpret" 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 psql:dbsetup.sql:5697: NOTICE: identifier "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcontext" will be truncated to "fkreverseintensitycontext_codomainmapcontext_id_codomainmapcont" 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 ALTER TABLE 01:08:28 CREATE TABLE 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 DROP TABLE 01:08:28 CREATE VIEW 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE FUNCTION 01:08:28 CREATE TRIGGER 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:28 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE FUNCTION 01:08:29 SET CONSTRAINTS 01:08:29 CREATE FUNCTION 01:08:29 CREATE SEQUENCE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 CREATE INDEX 01:08:29 CREATE FUNCTION 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE SEQUENCE 01:08:29 INSERT 0 1 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE TABLE 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 INSERT 0 1 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 UPDATE 1 01:08:29 ALTER TABLE 01:08:29 CREATE FUNCTION 01:08:29 CREATE TABLE 01:08:29 INSERT 0 1 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 CREATE INDEX 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 ALTER TABLE 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE TABLE 01:08:29 INSERT 0 1 01:08:29 INSERT 0 1 01:08:29 CREATE TABLE 01:08:29 INSERT 0 1 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TABLE 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE INDEX 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 DROP TABLE 01:08:29 DROP TABLE 01:08:29 DROP TABLE 01:08:29 DROP TABLE 01:08:29 DROP TABLE 01:08:29 CREATE VIEW 01:08:29 CREATE VIEW 01:08:29 CREATE VIEW 01:08:29 CREATE VIEW 01:08:29 CREATE VIEW 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 ALTER TABLE 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TABLE 01:08:29 CREATE INDEX 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE FUNCTION 01:08:29 CREATE FUNCTION 01:08:29 CREATE TRIGGER 01:08:29 CREATE TRIGGER 01:08:29 CREATE INDEX 01:08:29 UPDATE 1 01:08:29 COMMIT 01:08:29 + rm dbsetup.sql 01:08:29 + export OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config 01:08:29 + OMERO_PROFILE=/home/omero/workspace/OMERO-test-integration/config 01:08:29 + mkdir -p /home/omero/workspace/OMERO-test-integration/config/blitz 01:08:29 + cp /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/src/dist/etc/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz 01:08:29 + for f in $OMERO_PROFILE/blitz/* 01:08:29 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example .example 01:08:29 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-senders.xml 01:08:29 + for f in $OMERO_PROFILE/blitz/* 01:08:29 ++ basename /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example .example 01:08:29 + mv /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.example /home/omero/workspace/OMERO-test-integration/config/blitz/mail-server.xml 01:08:29 + omero config set omero.mail.config true 01:08:30 + omero config set omero.mail.fake true 01:08:31 + omero config set omero.mail.port 2525 01:08:32 + BUILD_ID=DONT_KILL_ME 01:08:32 + omero admin start 01:08:42 No descriptor given. Using etc/grid/default.xml 01:09:02 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/master 01:09:02 Initializing /home/omero/workspace/OMERO-test-integration/src/dist/var/log 01:09:02 Creating /home/omero/workspace/OMERO-test-integration/src/dist/var/registry 01:09:02 Waiting on startup. Use CTRL-C to exit 01:09:02 + omero admin waitup 01:09:03 Waiting on startup. Use CTRL-C to exit 01:09:04 + omero admin diagnostics 01:09:10 ERROR:omero.util.UpgradeCheck:HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=5.19.6.dev0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7ff71aad0550>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 01:09:10 01:09:10 ================================================================================ 01:09:10 OMERO Diagnostics (admin) 01:09:10 ================================================================================ 01:09:10 01:09:10 Commands: java -version 11.0.24 (/usr/bin/java) 01:09:10 Commands: python -V 3.9.18 (/home/omero/workspace/OMERO-test-integration/.venv3/bin/python) 01:09:10 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode) 01:09:10 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin) 01:09:10 Commands: psql --version 16.4 (/usr/bin/psql) 01:09:10 Commands: openssl version 3.0.71 (/usr/bin/openssl) 01:09:11 01:09:11 Component: OMERO.py 5.19.6.dev0 01:09:11 Component: OMERO.server 5.6.3-513-75ed6e6d79-ice36-ice36 01:09:11 01:09:11 Server: icegridnode running 01:09:11 Server: Blitz-0 active (pid = 374535, enabled) 01:09:11 Server: DropBox active (pid = 374561, enabled) 01:09:11 Server: FileServer active (pid = 374568, enabled) 01:09:11 Server: Indexer-0 active (pid = 374611, enabled) 01:09:11 Server: MonitorServer active (pid = 374569, enabled) 01:09:11 Server: OMERO.Glacier2 active (pid = 374609, enabled) 01:09:11 Server: OMERO.IceStorm active (pid = 374571, enabled) 01:09:11 Server: PixelData-0 active (pid = 374570, enabled) 01:09:11 Server: Processor-0 activating (enabled) 01:09:11 Server: Tables-0 activating (enabled) 01:09:11 Server: TestDropBox inactive (enabled) 01:09:11 01:09:11 Log dir: /home/omero/workspace/OMERO-test-integration/src/dist/var/log exists 01:09:11 Log files: Blitz-0.log 133.7 KB errors=1 warnings=2 01:09:11 Log files: DropBox.log 1.4 KB 01:09:11 Log files: FileServer.log 114 B 01:09:11 Log files: Indexer-0.log 2.9 KB errors=0 warnings=2 01:09:11 Log files: MonitorServer.log 1.2 KB 01:09:11 Log files: PixelData-0.log 3.7 KB errors=0 warnings=2 01:09:11 Log files: Processor-0.log 592 B 01:09:11 Log files: Tables-0.log 841 B 01:09:11 Log files: TestDropBox.log n/a 01:09:11 Log files: master.err 2.1 KB 01:09:11 Log files: master.out 41.5 KB 01:09:11 Log files: Total size 0.19 MB 01:09:11 01:09:11 01:09:11 Environment:OMERO_HOME=(unset) 01:09:11 Environment:OMERODIR=/home/omero/workspace/OMERO-test-integration/src/dist 01:09:11 Environment:OMERO_NODE=(unset) 01:09:11 Environment:OMERO_MASTER=(unset) 01:09:11 Environment:OMERO_USERDIR=(unset) 01:09:11 Environment:OMERO_TMPDIR=(unset) 01:09:11 Environment:PATH=/home/omero/workspace/OMERO-test-integration/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 01:09:11 Environment:PYTHONPATH=(unset) 01:09:11 Environment:ICE_HOME=/opt/ice-3.6.5 01:09:11 Environment:LD_LIBRARY_PATH=(unset) 01:09:11 Environment:DYLD_LIBRARY_PATH=(unset) 01:09:11 01:09:11 OMERO SSL port:14064 01:09:11 OMERO TCP port:14063 01:09:11 OMERO data dir:'/home/omero/workspace/OMERO-test-integration/data' Exists? True Is writable? True 01:09:11 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 485861) 01:09:11 01:09:11 JVM settings: Blitz-${index} -Xmx9600m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 01:09:11 JVM settings: Indexer-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 01:09:11 JVM settings: PixelData-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 01:09:11 JVM settings: Repository-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions 01:09:11 01:09:11 Jar: lib/server/formats-api.jar Bio-Formats API 8.0.0-SNAPSHOT 24 October 2024 62d359b4bc191e66a0e75fbc407c2b440d35be57 01:09:11 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.0.0-SNAPSHOT 24 October 2024 62d359b4bc191e66a0e75fbc407c2b440d35be57 01:09:11 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.0.0-SNAPSHOT 24 October 2024 62d359b4bc191e66a0e75fbc407c2b440d35be57 01:09:11 Jar: lib/server/ome-codecs.jar OME Codecs 1.0.4-SNAPSHOT 24 October 2024 acd1ac3c9a4aa7d1ec69c8106e23103675af5952 01:09:11 Jar: lib/server/ome-common.jar OME Common Java 6.0.25-SNAPSHOT 24 October 2024 acd1ac3c9a4aa7d1ec69c8106e23103675af5952 01:09:11 Jar: lib/server/ome-jai.jar OME JAI 0.1.5-SNAPSHOT 24 October 2024 acd1ac3c9a4aa7d1ec69c8106e23103675af5952 01:09:11 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.4-SNAPSHOT 24 October 2024 acd1ac3c9a4aa7d1ec69c8106e23103675af5952 01:09:11 Jar: lib/server/ome-poi.jar OME POI 5.3.10-SNAPSHOT 24 October 2024 acd1ac3c9a4aa7d1ec69c8106e23103675af5952 01:09:11 Jar: lib/server/ome-xml.jar OME XML library 6.3.7-SNAPSHOT 24 October 2024 acd1ac3c9a4aa7d1ec69c8106e23103675af5952 01:09:11 Jar: lib/server/omero-blitz.jar jar 5.7.5-SNAPSHOT 01:09:11 Jar: lib/server/omero-common.jar jar 5.6.8-SNAPSHOT 01:09:11 Jar: lib/server/omero-gateway.jar jar 5.9.4-SNAPSHOT 01:09:11 Jar: lib/server/omero-model.jar jar 5.6.16-SNAPSHOT 01:09:11 Jar: lib/server/omero-renderer.jar jar 5.5.18-SNAPSHOT 01:09:11 Jar: lib/server/omero-romio.jar jar 5.7.8-SNAPSHOT 01:09:11 Jar: lib/server/omero-server.jar jar 5.6.13-SNAPSHOT 01:09:11 + export OMERO_SESSION_DIR=/tmp/OMERO-test-integration/206 01:09:11 + OMERO_SESSION_DIR=/tmp/OMERO-test-integration/206 01:09:11 + export ICE_CONFIG=/home/omero/workspace/OMERO-test-integration/src/dist/etc/ice.config 01:09:11 + ICE_CONFIG=/home/omero/workspace/OMERO-test-integration/src/dist/etc/ice.config 01:09:11 + echo Running the integration tests with -Dtestng.useDefaultListeners=true 01:09:11 Running the integration tests with -Dtestng.useDefaultListeners=true 01:09:11 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroJava/build.xml -Dtestng.useDefaultListeners=true -Dtestreports.dir=target/reports/integration integration 01:09:11 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 01:09:11 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/build.xml 01:09:12 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava... 01:09:12 01:09:12 testng-init: 01:09:12 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ :: 01:09:12 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:09:16 01:09:15,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 01:09:16 01:09:15,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - No custom configurators were discovered as a service. 01:09:16 01:09:15,763 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator 01:09:16 01:09:15,767 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator 01:09:16 01:09:15,767 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] 01:09:16 01:09:15,768 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] 01:09:16 01:09:15,768 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY 01:09:16 01:09:15,769 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator 01:09:16 01:09:15,770 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator 01:09:16 01:09:15,771 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] 01:09:16 01:09:15,771 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 01:09:16 01:09:15,772 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs multiple times on the classpath. 01:09:16 01:09:15,772 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 01:09:16 01:09:15,772 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1b560eb0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml] 01:09:16 01:09:15,985 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr] 01:09:16 01:09:15,985 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] 01:09:16 01:09:16,002 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property 01:09:16 01:09:16,004 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender. 01:09:16 01:09:16,004 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Please move "immediateFlush" property into the enclosing appender. 01:09:16 01:09:16,064 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@9e02f84 - Setting the "immediateFlush" property of the enclosing appender to true 01:09:16 01:09:16,065 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR 01:09:16 01:09:16,065 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR 01:09:16 01:09:16,065 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR 01:09:16 01:09:16,065 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR 01:09:16 01:09:16,065 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN 01:09:16 01:09:16,065 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT] 01:09:16 01:09:16,066 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1e6060f1 - End of configuration. 01:09:16 01:09:16,068 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7e49ded - Registering current configuration as safe fallback point 01:09:16 01:09:16,068 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1e40fbb3 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 298 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY 01:09:16 01:09:16 lifecycle.test-compile: 01:09:16 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_420328800.tmp 01:09:16 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml 01:09:16 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 01:09:16 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-513-75ed6e6d79-ice36-ice36 :: integration :: Thu Oct 24 01:09:12 UTC 2024 01:09:16 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml 01:09:16 :: publishing :: omero#OmeroJava-test 01:09:16 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-75ed6e6d79-ice36-ice36.jar 01:09:16 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-75ed6e6d79-ice36-ice36.xml 01:09:16 01:09:16 integration: 01:09:16 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 01:09:16 01:09:16,611 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 01:09:16 01:09:16,615 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - No custom configurators were discovered as a service. 01:09:16 01:09:16,615 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator 01:09:16 01:09:16,616 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator 01:09:16 01:09:16,617 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] 01:09:16 01:09:16,617 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] 01:09:16 01:09:16,618 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY 01:09:16 01:09:16,618 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator 01:09:16 01:09:16,618 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator 01:09:16 01:09:16,619 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] 01:09:16 01:09:16,620 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 01:09:16 01:09:16,620 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs multiple times on the classpath. 01:09:16 01:09:16,620 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 01:09:16 01:09:16,620 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml] 01:09:16 01:09:16,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr] 01:09:16 01:09:16,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] 01:09:16 01:09:16,830 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property 01:09:16 01:09:16,831 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender. 01:09:16 01:09:16,831 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Please move "immediateFlush" property into the enclosing appender. 01:09:16 01:09:16,858 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Setting the "immediateFlush" property of the enclosing appender to true 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT] 01:09:16 01:09:16,859 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@158d2680 - End of configuration. 01:09:16 01:09:16,860 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@77847718 - Registering current configuration as safe fallback point 01:09:16 01:09:16,860 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 242 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY 01:09:18 Oct 24, 2024 1:09:18 AM ome.system.OmeroContext prepareRefresh 01:09:18 INFO: Refreshing ome.system.OmeroContext@7f8633ae: startup date [Thu Oct 24 01:09:18 UTC 2024]; root of context hierarchy 01:09:18 Oct 24, 2024 1:09:18 AM org.springframework.beans.factory.xml.XmlBeanDefinitionReader loadBeanDefinitions 01:09:18 INFO: Loading XML bean definitions from class path resource [ome/config.xml] 01:09:34 2624ec83-2e4c-4fe8-957f-37364d44d6a0 01:14:35 2024-10-24 01:14:35,693 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:14:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:14:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:14:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:14:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:14:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:14:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:14:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:14:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:14:35 at java.base/java.lang.Thread.run(Thread.java:829) 01:14:35 Caused by: Ice.CommunicatorDestroyedException: null 01:14:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:14:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:14:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:14:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:14:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:14:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:14:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:14:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:14:35 ... 7 common frames omitted 01:14:52 2024-10-24 01:14:52,400 ERROR [ ome.formats.importer.ImportLibrary] (sDataset-1) Cannot link to target 01:14:55 2024-10-24 01:14:55,423 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:14:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:14:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:14:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:14:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:14:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:14:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:14:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:14:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:14:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:14:55 Caused by: Ice.CommunicatorDestroyedException: null 01:14:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:14:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:14:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:14:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:14:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:14:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:14:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:14:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:14:55 ... 7 common frames omitted 01:15:00 2024-10-24 01:15:00,825 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:15:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:15:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:15:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:15:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:15:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:15:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:15:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:15:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:15:00 at java.base/java.lang.Thread.run(Thread.java:829) 01:15:00 Caused by: Ice.CommunicatorDestroyedException: null 01:15:00 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:15:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:15:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:15:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:15:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:15:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:15:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:15:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:15:00 ... 7 common frames omitted 01:15:46 2024-10-24 01:15:46,531 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:15:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:15:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:15:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:15:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:15:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:15:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:15:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:15:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:15:46 at java.base/java.lang.Thread.run(Thread.java:829) 01:15:46 Caused by: Ice.CommunicatorDestroyedException: null 01:15:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:15:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:15:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:15:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:15:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:15:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:15:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:15:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:15:46 ... 7 common frames omitted 01:16:09 2024-10-24 01:16:09,514 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:16:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:16:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:16:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:16:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:16:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:16:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:16:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:16:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:16:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:16:09 Caused by: Ice.CommunicatorDestroyedException: null 01:16:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:16:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:16:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:16:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:16:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:16:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:16:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:16:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:16:09 ... 7 common frames omitted 01:19:07 2024-10-24 01:19:07,967 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:19:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:07 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:07 Caused by: Ice.CommunicatorDestroyedException: null 01:19:07 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:07 ... 7 common frames omitted 01:19:09 2024-10-24 01:19:09,085 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:19:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:09 Caused by: Ice.CommunicatorDestroyedException: null 01:19:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:09 ... 7 common frames omitted 01:19:10 2024-10-24 01:19:10,060 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:19:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:10 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:10 Caused by: Ice.CommunicatorDestroyedException: null 01:19:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:10 ... 7 common frames omitted 01:19:14 2024-10-24 01:19:14,398 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:14 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:14 Caused by: Ice.CommunicatorDestroyedException: null 01:19:14 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:14 ... 7 common frames omitted 01:19:15 2024-10-24 01:19:15,143 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:19:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:15 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:15 Caused by: Ice.CommunicatorDestroyedException: null 01:19:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:15 ... 7 common frames omitted 01:19:15 2024-10-24 01:19:15,764 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:19:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:15 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:15 Caused by: Ice.CommunicatorDestroyedException: null 01:19:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:15 ... 7 common frames omitted 01:19:16 2024-10-24 01:19:16,453 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:19:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:16 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:16 Caused by: Ice.CommunicatorDestroyedException: null 01:19:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:16 ... 7 common frames omitted 01:19:17 2024-10-24 01:19:17,147 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:19:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:17 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:17 Caused by: Ice.CommunicatorDestroyedException: null 01:19:17 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:17 ... 7 common frames omitted 01:19:17 2024-10-24 01:19:17,753 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:17 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:17 Caused by: Ice.CommunicatorDestroyedException: null 01:19:17 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:17 ... 7 common frames omitted 01:19:18 2024-10-24 01:19:18,420 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:19:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:18 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:18 Caused by: Ice.CommunicatorDestroyedException: null 01:19:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:18 ... 7 common frames omitted 01:19:19 2024-10-24 01:19:19,159 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:19:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:19 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:19 Caused by: Ice.CommunicatorDestroyedException: null 01:19:19 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:19 ... 7 common frames omitted 01:19:20 2024-10-24 01:19:20,051 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:19:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:20 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:20 Caused by: Ice.CommunicatorDestroyedException: null 01:19:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:20 ... 7 common frames omitted 01:19:20 2024-10-24 01:19:20,873 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:19:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:20 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:20 Caused by: Ice.CommunicatorDestroyedException: null 01:19:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:20 ... 7 common frames omitted 01:19:21 2024-10-24 01:19:21,562 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:21 Caused by: Ice.CommunicatorDestroyedException: null 01:19:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:21 ... 7 common frames omitted 01:19:22 2024-10-24 01:19:22,172 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:19:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:22 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:22 Caused by: Ice.CommunicatorDestroyedException: null 01:19:22 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:22 ... 7 common frames omitted 01:19:22 2024-10-24 01:19:22,856 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:19:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:22 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:22 Caused by: Ice.CommunicatorDestroyedException: null 01:19:22 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:22 ... 7 common frames omitted 01:19:23 2024-10-24 01:19:23,553 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:19:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:23 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:23 Caused by: Ice.CommunicatorDestroyedException: null 01:19:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:23 ... 7 common frames omitted 01:19:24 2024-10-24 01:19:24,177 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:24 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:24 Caused by: Ice.CommunicatorDestroyedException: null 01:19:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:24 ... 7 common frames omitted 01:19:24 2024-10-24 01:19:24,925 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:19:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:24 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:24 Caused by: Ice.CommunicatorDestroyedException: null 01:19:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:24 ... 7 common frames omitted 01:19:25 2024-10-24 01:19:25,608 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:19:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:25 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:25 Caused by: Ice.CommunicatorDestroyedException: null 01:19:25 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:25 ... 7 common frames omitted 01:19:26 2024-10-24 01:19:26,543 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:19:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:26 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:26 Caused by: Ice.CommunicatorDestroyedException: null 01:19:26 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:26 ... 7 common frames omitted 01:19:27 2024-10-24 01:19:27,231 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:19:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:27 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:27 Caused by: Ice.CommunicatorDestroyedException: null 01:19:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:27 ... 7 common frames omitted 01:19:27 2024-10-24 01:19:27,964 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:19:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:27 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:27 Caused by: Ice.CommunicatorDestroyedException: null 01:19:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:27 ... 7 common frames omitted 01:19:28 2024-10-24 01:19:28,598 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:19:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:28 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:28 Caused by: Ice.CommunicatorDestroyedException: null 01:19:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:28 ... 7 common frames omitted 01:19:29 2024-10-24 01:19:29,257 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:19:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:29 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:29 Caused by: Ice.CommunicatorDestroyedException: null 01:19:29 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:29 ... 7 common frames omitted 01:19:30 2024-10-24 01:19:30,078 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:19:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:30 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:30 Caused by: Ice.CommunicatorDestroyedException: null 01:19:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:30 ... 7 common frames omitted 01:19:30 2024-10-24 01:19:30,754 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:19:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:30 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:30 Caused by: Ice.CommunicatorDestroyedException: null 01:19:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:30 ... 7 common frames omitted 01:19:31 2024-10-24 01:19:31,429 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:31 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:31 Caused by: Ice.CommunicatorDestroyedException: null 01:19:31 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:31 ... 7 common frames omitted 01:19:32 2024-10-24 01:19:32,369 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:19:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:32 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:32 Caused by: Ice.CommunicatorDestroyedException: null 01:19:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:32 ... 7 common frames omitted 01:19:33 2024-10-24 01:19:33,160 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:19:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:33 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:33 Caused by: Ice.CommunicatorDestroyedException: null 01:19:33 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:33 ... 7 common frames omitted 01:19:34 2024-10-24 01:19:34,015 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:19:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:34 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:34 Caused by: Ice.CommunicatorDestroyedException: null 01:19:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:34 ... 7 common frames omitted 01:19:34 2024-10-24 01:19:34,880 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:19:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:34 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:34 Caused by: Ice.CommunicatorDestroyedException: null 01:19:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:34 ... 7 common frames omitted 01:19:35 2024-10-24 01:19:35,865 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:19:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:35 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:35 Caused by: Ice.CommunicatorDestroyedException: null 01:19:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:35 ... 7 common frames omitted 01:19:36 2024-10-24 01:19:36,940 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:19:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:36 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:36 Caused by: Ice.CommunicatorDestroyedException: null 01:19:36 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:36 ... 7 common frames omitted 01:19:37 2024-10-24 01:19:37,912 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:19:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:37 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:37 Caused by: Ice.CommunicatorDestroyedException: null 01:19:37 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:37 ... 7 common frames omitted 01:19:38 2024-10-24 01:19:38,870 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:19:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:38 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:38 Caused by: Ice.CommunicatorDestroyedException: null 01:19:38 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:38 ... 7 common frames omitted 01:19:40 2024-10-24 01:19:40,077 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:19:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:40 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:40 Caused by: Ice.CommunicatorDestroyedException: null 01:19:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:40 ... 7 common frames omitted 01:19:40 2024-10-24 01:19:40,948 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:40 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:40 Caused by: Ice.CommunicatorDestroyedException: null 01:19:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:40 ... 7 common frames omitted 01:19:41 2024-10-24 01:19:41,776 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:19:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:41 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:41 Caused by: Ice.CommunicatorDestroyedException: null 01:19:41 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:41 ... 7 common frames omitted 01:19:45 2024-10-24 01:19:45,903 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:19:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:45 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:45 Caused by: Ice.CommunicatorDestroyedException: null 01:19:45 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:45 ... 7 common frames omitted 01:19:47 2024-10-24 01:19:47,028 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:19:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:47 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:47 Caused by: Ice.CommunicatorDestroyedException: null 01:19:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:47 ... 7 common frames omitted 01:19:48 2024-10-24 01:19:48,862 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:19:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:48 Caused by: Ice.CommunicatorDestroyedException: null 01:19:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:48 ... 7 common frames omitted 01:19:50 2024-10-24 01:19:50,164 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:19:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:50 Caused by: Ice.CommunicatorDestroyedException: null 01:19:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:50 ... 7 common frames omitted 01:19:51 2024-10-24 01:19:51,054 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:19:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:51 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:51 Caused by: Ice.CommunicatorDestroyedException: null 01:19:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:51 ... 7 common frames omitted 01:19:52 2024-10-24 01:19:52,385 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:19:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:52 Caused by: Ice.CommunicatorDestroyedException: null 01:19:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:52 ... 7 common frames omitted 01:19:52 2024-10-24 01:19:52,882 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:19:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:52 Caused by: Ice.CommunicatorDestroyedException: null 01:19:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:52 ... 7 common frames omitted 01:19:54 2024-10-24 01:19:54,277 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:19:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:54 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:54 Caused by: Ice.CommunicatorDestroyedException: null 01:19:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:54 ... 7 common frames omitted 01:19:55 2024-10-24 01:19:55,191 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:19:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:55 Caused by: Ice.CommunicatorDestroyedException: null 01:19:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:55 ... 7 common frames omitted 01:19:57 2024-10-24 01:19:57,385 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:19:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:57 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:57 Caused by: Ice.CommunicatorDestroyedException: null 01:19:57 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:57 ... 7 common frames omitted 01:19:58 2024-10-24 01:19:58,774 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:19:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:19:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:19:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:19:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:19:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:19:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:19:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:19:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:19:58 at java.base/java.lang.Thread.run(Thread.java:829) 01:19:58 Caused by: Ice.CommunicatorDestroyedException: null 01:19:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:19:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:19:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:19:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:19:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:19:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:19:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:19:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:19:58 ... 7 common frames omitted 01:20:00 2024-10-24 01:20:00,149 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:20:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:20:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:20:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:20:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:20:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:20:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:20:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:20:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:20:00 at java.base/java.lang.Thread.run(Thread.java:829) 01:20:00 Caused by: Ice.CommunicatorDestroyedException: null 01:20:00 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:20:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:20:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:20:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:20:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:20:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:20:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:20:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:20:00 ... 7 common frames omitted 01:20:03 2024-10-24 01:20:03,420 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:20:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:20:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:20:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:20:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:20:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:20:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:20:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:20:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:20:03 at java.base/java.lang.Thread.run(Thread.java:829) 01:20:03 Caused by: Ice.CommunicatorDestroyedException: null 01:20:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:20:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:20:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:20:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:20:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:20:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:20:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:20:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:20:03 ... 7 common frames omitted 01:20:08 2024-10-24 01:20:08,118 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:20:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:20:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:20:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:20:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:20:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:20:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:20:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:20:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:20:08 at java.base/java.lang.Thread.run(Thread.java:829) 01:20:08 Caused by: Ice.CommunicatorDestroyedException: null 01:20:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:20:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:20:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:20:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:20:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:20:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:20:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:20:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:20:08 ... 7 common frames omitted 01:20:09 2024-10-24 01:20:09,100 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:20:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:20:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:20:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:20:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:20:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:20:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:20:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:20:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:20:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:20:09 Caused by: Ice.CommunicatorDestroyedException: null 01:20:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:20:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:20:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:20:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:20:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:20:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:20:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:20:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:20:09 ... 7 common frames omitted 01:20:09 2024-10-24 01:20:09,884 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:20:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:20:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:20:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:20:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:20:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:20:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:20:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:20:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:20:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:20:09 Caused by: Ice.CommunicatorDestroyedException: null 01:20:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:20:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:20:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:20:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:20:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:20:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:20:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:20:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:20:09 ... 7 common frames omitted 01:20:11 2024-10-24 01:20:11,114 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:20:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:20:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:20:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:20:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:20:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:20:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:20:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:20:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:20:11 at java.base/java.lang.Thread.run(Thread.java:829) 01:20:11 Caused by: Ice.CommunicatorDestroyedException: null 01:20:11 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:20:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:20:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:20:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:20:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:20:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:20:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:20:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:20:11 ... 7 common frames omitted 01:21:45 2024-10-24 01:21:45,689 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:21:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:45 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:45 Caused by: Ice.CommunicatorDestroyedException: null 01:21:45 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:45 ... 7 common frames omitted 01:21:47 2024-10-24 01:21:47,591 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:21:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:47 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:47 Caused by: Ice.CommunicatorDestroyedException: null 01:21:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:47 ... 7 common frames omitted 01:21:49 2024-10-24 01:21:49,466 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:21:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:49 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:49 Caused by: Ice.CommunicatorDestroyedException: null 01:21:49 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:49 ... 7 common frames omitted 01:21:51 2024-10-24 01:21:51,641 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:21:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:51 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:51 Caused by: Ice.CommunicatorDestroyedException: null 01:21:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:51 ... 7 common frames omitted 01:21:54 2024-10-24 01:21:54,061 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:21:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:54 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:54 Caused by: Ice.CommunicatorDestroyedException: null 01:21:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:54 ... 7 common frames omitted 01:21:55 2024-10-24 01:21:55,638 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:21:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:55 Caused by: Ice.CommunicatorDestroyedException: null 01:21:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:55 ... 7 common frames omitted 01:21:57 2024-10-24 01:21:57,507 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:21:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:57 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:57 Caused by: Ice.CommunicatorDestroyedException: null 01:21:57 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:57 ... 7 common frames omitted 01:21:59 2024-10-24 01:21:59,009 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:21:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:21:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:21:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:21:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:21:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:21:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:21:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:21:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:21:59 at java.base/java.lang.Thread.run(Thread.java:829) 01:21:59 Caused by: Ice.CommunicatorDestroyedException: null 01:21:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:21:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:21:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:21:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:21:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:21:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:21:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:21:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:21:59 ... 7 common frames omitted 01:25:35 2024-10-24 01:25:35,264 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:25:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:35 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:35 Caused by: Ice.CommunicatorDestroyedException: null 01:25:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:35 ... 7 common frames omitted 01:25:36 2024-10-24 01:25:36,181 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:25:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:36 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:36 Caused by: Ice.CommunicatorDestroyedException: null 01:25:36 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:36 ... 7 common frames omitted 01:25:38 2024-10-24 01:25:38,128 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:25:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:38 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:38 Caused by: Ice.CommunicatorDestroyedException: null 01:25:38 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:38 ... 7 common frames omitted 01:25:40 2024-10-24 01:25:40,048 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:25:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:40 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:40 Caused by: Ice.CommunicatorDestroyedException: null 01:25:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:40 ... 7 common frames omitted 01:25:40 2024-10-24 01:25:40,497 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:25:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:40 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:40 Caused by: Ice.CommunicatorDestroyedException: null 01:25:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:40 ... 7 common frames omitted 01:25:42 2024-10-24 01:25:42,158 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:25:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:42 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:42 Caused by: Ice.CommunicatorDestroyedException: null 01:25:42 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:42 ... 7 common frames omitted 01:25:44 2024-10-24 01:25:44,090 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:25:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:44 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:44 Caused by: Ice.CommunicatorDestroyedException: null 01:25:44 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:44 ... 7 common frames omitted 01:25:46 2024-10-24 01:25:46,054 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:25:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:46 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:46 Caused by: Ice.CommunicatorDestroyedException: null 01:25:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:46 ... 7 common frames omitted 01:25:48 2024-10-24 01:25:48,890 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:25:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:48 Caused by: Ice.CommunicatorDestroyedException: null 01:25:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:48 ... 7 common frames omitted 01:25:50 2024-10-24 01:25:50,677 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:25:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:50 Caused by: Ice.CommunicatorDestroyedException: null 01:25:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:50 ... 7 common frames omitted 01:25:52 2024-10-24 01:25:52,988 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:25:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:52 Caused by: Ice.CommunicatorDestroyedException: null 01:25:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:52 ... 7 common frames omitted 01:25:54 2024-10-24 01:25:54,828 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:25:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:25:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:25:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:25:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:25:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:25:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:25:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:25:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:25:54 at java.base/java.lang.Thread.run(Thread.java:829) 01:25:54 Caused by: Ice.CommunicatorDestroyedException: null 01:25:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:25:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:25:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:25:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:25:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:25:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:25:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:25:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:25:54 ... 7 common frames omitted 01:26:46 2024-10-24 01:26:46,547 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:26:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:26:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:26:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:26:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:26:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:26:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:26:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:26:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:26:46 at java.base/java.lang.Thread.run(Thread.java:829) 01:26:46 Caused by: Ice.CommunicatorDestroyedException: null 01:26:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:26:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:26:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:26:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:26:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:26:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:26:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:26:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:26:46 ... 7 common frames omitted 01:26:48 2024-10-24 01:26:48,707 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:26:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:26:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:26:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:26:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:26:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:26:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:26:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:26:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:26:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:26:48 Caused by: Ice.CommunicatorDestroyedException: null 01:26:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:26:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:26:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:26:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:26:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:26:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:26:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:26:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:26:48 ... 7 common frames omitted 01:26:50 2024-10-24 01:26:50,775 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:26:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:26:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:26:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:26:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:26:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:26:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:26:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:26:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:26:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:26:50 Caused by: Ice.CommunicatorDestroyedException: null 01:26:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:26:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:26:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:26:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:26:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:26:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:26:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:26:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:26:50 ... 7 common frames omitted 01:26:52 2024-10-24 01:26:52,775 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:26:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:26:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:26:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:26:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:26:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:26:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:26:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:26:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:26:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:26:52 Caused by: Ice.CommunicatorDestroyedException: null 01:26:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:26:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:26:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:26:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:26:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:26:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:26:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:26:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:26:52 ... 7 common frames omitted 01:26:54 2024-10-24 01:26:54,847 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:26:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:26:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:26:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:26:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:26:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:26:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:26:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:26:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:26:54 at java.base/java.lang.Thread.run(Thread.java:829) 01:26:54 Caused by: Ice.CommunicatorDestroyedException: null 01:26:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:26:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:26:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:26:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:26:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:26:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:26:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:26:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:26:54 ... 7 common frames omitted 01:26:58 2024-10-24 01:26:58,408 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:26:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:26:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:26:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:26:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:26:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:26:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:26:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:26:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:26:58 at java.base/java.lang.Thread.run(Thread.java:829) 01:26:58 Caused by: Ice.CommunicatorDestroyedException: null 01:26:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:26:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:26:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:26:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:26:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:26:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:26:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:26:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:26:58 ... 7 common frames omitted 01:27:01 2024-10-24 01:27:01,778 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:27:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:01 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:01 Caused by: Ice.CommunicatorDestroyedException: null 01:27:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:01 ... 7 common frames omitted 01:27:05 2024-10-24 01:27:05,175 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:27:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:05 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:05 Caused by: Ice.CommunicatorDestroyedException: null 01:27:05 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:05 ... 7 common frames omitted 01:27:08 2024-10-24 01:27:08,412 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:27:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:08 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:08 Caused by: Ice.CommunicatorDestroyedException: null 01:27:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:08 ... 7 common frames omitted 01:27:11 2024-10-24 01:27:11,339 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:27:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:11 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:11 Caused by: Ice.CommunicatorDestroyedException: null 01:27:11 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:11 ... 7 common frames omitted 01:27:13 2024-10-24 01:27:13,782 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:27:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:13 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:13 Caused by: Ice.CommunicatorDestroyedException: null 01:27:13 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:13 ... 7 common frames omitted 01:27:16 2024-10-24 01:27:16,327 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:27:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:16 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:16 Caused by: Ice.CommunicatorDestroyedException: null 01:27:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:16 ... 7 common frames omitted 01:27:18 2024-10-24 01:27:18,638 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:27:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:18 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:18 Caused by: Ice.CommunicatorDestroyedException: null 01:27:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:18 ... 7 common frames omitted 01:27:21 2024-10-24 01:27:21,087 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:27:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:21 Caused by: Ice.CommunicatorDestroyedException: null 01:27:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:21 ... 7 common frames omitted 01:27:23 2024-10-24 01:27:23,635 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:27:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:23 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:23 Caused by: Ice.CommunicatorDestroyedException: null 01:27:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:23 ... 7 common frames omitted 01:27:26 2024-10-24 01:27:26,162 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:27:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:26 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:26 Caused by: Ice.CommunicatorDestroyedException: null 01:27:26 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:26 ... 7 common frames omitted 01:27:28 2024-10-24 01:27:28,769 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:27:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:28 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:28 Caused by: Ice.CommunicatorDestroyedException: null 01:27:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:28 ... 7 common frames omitted 01:27:31 2024-10-24 01:27:31,294 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:27:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:31 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:31 Caused by: Ice.CommunicatorDestroyedException: null 01:27:31 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:31 ... 7 common frames omitted 01:27:34 2024-10-24 01:27:34,044 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:27:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:34 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:34 Caused by: Ice.CommunicatorDestroyedException: null 01:27:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:34 ... 7 common frames omitted 01:27:36 2024-10-24 01:27:36,578 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:27:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:36 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:36 Caused by: Ice.CommunicatorDestroyedException: null 01:27:36 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:36 ... 7 common frames omitted 01:27:39 2024-10-24 01:27:39,501 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:27:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:39 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:39 Caused by: Ice.CommunicatorDestroyedException: null 01:27:39 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:39 ... 7 common frames omitted 01:27:43 2024-10-24 01:27:43,613 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:27:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:43 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:43 Caused by: Ice.CommunicatorDestroyedException: null 01:27:43 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:43 ... 7 common frames omitted 01:27:48 2024-10-24 01:27:48,540 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:27:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:48 Caused by: Ice.CommunicatorDestroyedException: null 01:27:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:48 ... 7 common frames omitted 01:27:52 2024-10-24 01:27:52,654 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:27:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:52 Caused by: Ice.CommunicatorDestroyedException: null 01:27:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:52 ... 7 common frames omitted 01:27:56 2024-10-24 01:27:56,650 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:27:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:56 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:56 Caused by: Ice.CommunicatorDestroyedException: null 01:27:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:56 ... 7 common frames omitted 01:27:59 2024-10-24 01:27:59,308 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:27:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:27:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:27:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:27:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:27:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:27:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:27:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:27:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:27:59 at java.base/java.lang.Thread.run(Thread.java:829) 01:27:59 Caused by: Ice.CommunicatorDestroyedException: null 01:27:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:27:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:27:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:27:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:27:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:27:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:27:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:27:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:27:59 ... 7 common frames omitted 01:28:01 2024-10-24 01:28:01,900 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:28:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:01 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:01 Caused by: Ice.CommunicatorDestroyedException: null 01:28:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:01 ... 7 common frames omitted 01:28:04 2024-10-24 01:28:04,411 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:28:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:04 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:04 Caused by: Ice.CommunicatorDestroyedException: null 01:28:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:04 ... 7 common frames omitted 01:28:07 2024-10-24 01:28:07,042 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:28:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:07 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:07 Caused by: Ice.CommunicatorDestroyedException: null 01:28:07 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:07 ... 7 common frames omitted 01:28:09 2024-10-24 01:28:09,731 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:28:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:09 Caused by: Ice.CommunicatorDestroyedException: null 01:28:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:09 ... 7 common frames omitted 01:28:12 2024-10-24 01:28:12,466 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:28:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:12 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:12 Caused by: Ice.CommunicatorDestroyedException: null 01:28:12 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:12 ... 7 common frames omitted 01:28:15 2024-10-24 01:28:15,085 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:28:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:15 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:15 Caused by: Ice.CommunicatorDestroyedException: null 01:28:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:15 ... 7 common frames omitted 01:28:17 2024-10-24 01:28:17,584 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:28:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:17 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:17 Caused by: Ice.CommunicatorDestroyedException: null 01:28:17 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:17 ... 7 common frames omitted 01:28:20 2024-10-24 01:28:20,399 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:28:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:20 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:20 Caused by: Ice.CommunicatorDestroyedException: null 01:28:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:20 ... 7 common frames omitted 01:28:23 2024-10-24 01:28:23,020 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:28:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:23 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:23 Caused by: Ice.CommunicatorDestroyedException: null 01:28:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:23 ... 7 common frames omitted 01:28:25 2024-10-24 01:28:25,652 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:28:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:25 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:25 Caused by: Ice.CommunicatorDestroyedException: null 01:28:25 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:25 ... 7 common frames omitted 01:28:28 2024-10-24 01:28:28,449 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:28:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:28 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:28 Caused by: Ice.CommunicatorDestroyedException: null 01:28:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:28 ... 7 common frames omitted 01:28:33 2024-10-24 01:28:33,222 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:28:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:33 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:33 Caused by: Ice.CommunicatorDestroyedException: null 01:28:33 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:33 ... 7 common frames omitted 01:28:36 2024-10-24 01:28:36,903 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:28:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:36 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:36 Caused by: Ice.CommunicatorDestroyedException: null 01:28:36 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:36 ... 7 common frames omitted 01:28:40 2024-10-24 01:28:40,755 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:28:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:40 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:40 Caused by: Ice.CommunicatorDestroyedException: null 01:28:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:40 ... 7 common frames omitted 01:28:45 2024-10-24 01:28:45,394 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:28:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:45 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:45 Caused by: Ice.CommunicatorDestroyedException: null 01:28:45 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:45 ... 7 common frames omitted 01:28:48 2024-10-24 01:28:48,238 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:28:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:48 Caused by: Ice.CommunicatorDestroyedException: null 01:28:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:48 ... 7 common frames omitted 01:28:51 2024-10-24 01:28:51,196 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:28:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:51 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:51 Caused by: Ice.CommunicatorDestroyedException: null 01:28:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:51 ... 7 common frames omitted 01:28:53 2024-10-24 01:28:53,547 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:28:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:53 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:53 Caused by: Ice.CommunicatorDestroyedException: null 01:28:53 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:53 ... 7 common frames omitted 01:28:56 2024-10-24 01:28:56,016 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:28:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:56 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:56 Caused by: Ice.CommunicatorDestroyedException: null 01:28:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:56 ... 7 common frames omitted 01:28:58 2024-10-24 01:28:58,772 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:28:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:28:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:28:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:28:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:28:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:28:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:28:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:28:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:28:58 at java.base/java.lang.Thread.run(Thread.java:829) 01:28:58 Caused by: Ice.CommunicatorDestroyedException: null 01:28:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:28:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:28:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:28:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:28:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:28:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:28:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:28:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:28:58 ... 7 common frames omitted 01:29:01 2024-10-24 01:29:01,444 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:29:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:01 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:01 Caused by: Ice.CommunicatorDestroyedException: null 01:29:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:01 ... 7 common frames omitted 01:29:03 2024-10-24 01:29:03,877 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:29:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:03 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:03 Caused by: Ice.CommunicatorDestroyedException: null 01:29:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:03 ... 7 common frames omitted 01:29:33 2024-10-24 01:29:33,046 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:29:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:33 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:33 Caused by: Ice.CommunicatorDestroyedException: null 01:29:33 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:33 ... 7 common frames omitted 01:29:37 2024-10-24 01:29:37,810 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:29:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:37 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:37 Caused by: Ice.CommunicatorDestroyedException: null 01:29:37 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:37 ... 7 common frames omitted 01:29:41 2024-10-24 01:29:41,619 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:29:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:41 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:41 Caused by: Ice.CommunicatorDestroyedException: null 01:29:41 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:41 ... 7 common frames omitted 01:29:45 2024-10-24 01:29:45,315 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:29:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:45 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:45 Caused by: Ice.CommunicatorDestroyedException: null 01:29:45 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:45 ... 7 common frames omitted 01:29:48 2024-10-24 01:29:48,840 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:29:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:48 Caused by: Ice.CommunicatorDestroyedException: null 01:29:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:48 ... 7 common frames omitted 01:29:52 2024-10-24 01:29:52,458 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:29:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:52 Caused by: Ice.CommunicatorDestroyedException: null 01:29:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:52 ... 7 common frames omitted 01:29:56 2024-10-24 01:29:56,084 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:29:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:56 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:56 Caused by: Ice.CommunicatorDestroyedException: null 01:29:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:56 ... 7 common frames omitted 01:29:59 2024-10-24 01:29:59,921 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:29:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:29:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:29:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:29:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:29:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:29:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:29:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:29:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:29:59 at java.base/java.lang.Thread.run(Thread.java:829) 01:29:59 Caused by: Ice.CommunicatorDestroyedException: null 01:29:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:29:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:29:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:29:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:29:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:29:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:29:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:29:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:29:59 ... 7 common frames omitted 01:30:03 2024-10-24 01:30:03,534 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:30:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:03 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:03 Caused by: Ice.CommunicatorDestroyedException: null 01:30:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:03 ... 7 common frames omitted 01:30:05 2024-10-24 01:30:05,921 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:30:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:05 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:05 Caused by: Ice.CommunicatorDestroyedException: null 01:30:05 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:05 ... 7 common frames omitted 01:30:08 2024-10-24 01:30:08,077 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:30:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:08 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:08 Caused by: Ice.CommunicatorDestroyedException: null 01:30:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:08 ... 7 common frames omitted 01:30:10 2024-10-24 01:30:10,258 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:30:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:10 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:10 Caused by: Ice.CommunicatorDestroyedException: null 01:30:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:10 ... 7 common frames omitted 01:30:13 2024-10-24 01:30:13,400 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:30:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:13 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:13 Caused by: Ice.CommunicatorDestroyedException: null 01:30:13 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:13 ... 7 common frames omitted 01:30:15 2024-10-24 01:30:15,784 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:30:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:15 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:15 Caused by: Ice.CommunicatorDestroyedException: null 01:30:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:15 ... 7 common frames omitted 01:30:18 2024-10-24 01:30:18,656 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:30:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:18 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:18 Caused by: Ice.CommunicatorDestroyedException: null 01:30:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:18 ... 7 common frames omitted 01:30:21 2024-10-24 01:30:21,555 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:30:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:21 Caused by: Ice.CommunicatorDestroyedException: null 01:30:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:21 ... 7 common frames omitted 01:30:24 2024-10-24 01:30:24,473 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:30:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:24 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:24 Caused by: Ice.CommunicatorDestroyedException: null 01:30:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:24 ... 7 common frames omitted 01:30:28 2024-10-24 01:30:28,884 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:30:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:28 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:28 Caused by: Ice.CommunicatorDestroyedException: null 01:30:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:28 ... 7 common frames omitted 01:30:33 2024-10-24 01:30:33,608 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:30:33 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:33 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:33 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:33 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:33 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:33 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:33 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:33 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:33 Caused by: Ice.CommunicatorDestroyedException: null 01:30:33 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:33 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:33 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:33 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:33 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:33 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:33 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:33 ... 7 common frames omitted 01:30:37 2024-10-24 01:30:37,605 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:30:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:37 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:37 Caused by: Ice.CommunicatorDestroyedException: null 01:30:37 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:37 ... 7 common frames omitted 01:30:42 2024-10-24 01:30:42,561 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:30:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:42 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:42 Caused by: Ice.CommunicatorDestroyedException: null 01:30:42 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:42 ... 7 common frames omitted 01:30:46 2024-10-24 01:30:46,797 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:30:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:46 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:46 Caused by: Ice.CommunicatorDestroyedException: null 01:30:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:46 ... 7 common frames omitted 01:30:50 2024-10-24 01:30:50,990 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:30:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:50 Caused by: Ice.CommunicatorDestroyedException: null 01:30:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:50 ... 7 common frames omitted 01:30:55 2024-10-24 01:30:55,153 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:30:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:30:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:30:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:30:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:30:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:30:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:30:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:30:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:30:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:30:55 Caused by: Ice.CommunicatorDestroyedException: null 01:30:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:30:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:30:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:30:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:30:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:30:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:30:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:30:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:30:55 ... 7 common frames omitted 01:32:21 2024-10-24 01:32:21,229 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:32:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:21 Caused by: Ice.CommunicatorDestroyedException: null 01:32:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:21 ... 7 common frames omitted 01:32:24 2024-10-24 01:32:24,179 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:32:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:24 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:24 Caused by: Ice.CommunicatorDestroyedException: null 01:32:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:24 ... 7 common frames omitted 01:32:27 2024-10-24 01:32:27,073 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:32:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:27 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:27 Caused by: Ice.CommunicatorDestroyedException: null 01:32:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:27 ... 7 common frames omitted 01:32:30 2024-10-24 01:32:30,068 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:32:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:30 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:30 Caused by: Ice.CommunicatorDestroyedException: null 01:32:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:30 ... 7 common frames omitted 01:32:32 2024-10-24 01:32:32,778 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:32:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:32 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:32 Caused by: Ice.CommunicatorDestroyedException: null 01:32:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:32 ... 7 common frames omitted 01:32:37 2024-10-24 01:32:37,078 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:32:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:37 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:37 Caused by: Ice.CommunicatorDestroyedException: null 01:32:37 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:37 ... 7 common frames omitted 01:32:41 2024-10-24 01:32:41,366 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:32:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:41 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:41 Caused by: Ice.CommunicatorDestroyedException: null 01:32:41 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:41 ... 7 common frames omitted 01:32:46 2024-10-24 01:32:46,027 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:32:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:46 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:46 Caused by: Ice.CommunicatorDestroyedException: null 01:32:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:46 ... 7 common frames omitted 01:32:50 2024-10-24 01:32:50,433 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:32:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:50 Caused by: Ice.CommunicatorDestroyedException: null 01:32:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:50 ... 7 common frames omitted 01:32:55 2024-10-24 01:32:55,096 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:32:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:55 Caused by: Ice.CommunicatorDestroyedException: null 01:32:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:55 ... 7 common frames omitted 01:32:59 2024-10-24 01:32:59,437 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:32:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:32:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:32:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:32:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:32:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:32:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:32:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:32:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:32:59 at java.base/java.lang.Thread.run(Thread.java:829) 01:32:59 Caused by: Ice.CommunicatorDestroyedException: null 01:32:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:32:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:32:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:32:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:32:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:32:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:32:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:32:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:32:59 ... 7 common frames omitted 01:33:04 2024-10-24 01:33:04,716 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:33:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:04 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:04 Caused by: Ice.CommunicatorDestroyedException: null 01:33:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:04 ... 7 common frames omitted 01:33:09 2024-10-24 01:33:09,421 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:33:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:09 Caused by: Ice.CommunicatorDestroyedException: null 01:33:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:09 ... 7 common frames omitted 01:33:16 2024-10-24 01:33:16,258 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:33:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:16 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:16 Caused by: Ice.CommunicatorDestroyedException: null 01:33:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:16 ... 7 common frames omitted 01:33:22 2024-10-24 01:33:22,616 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:33:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:22 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:22 Caused by: Ice.CommunicatorDestroyedException: null 01:33:22 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:22 ... 7 common frames omitted 01:33:29 2024-10-24 01:33:29,100 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:33:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:29 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:29 Caused by: Ice.CommunicatorDestroyedException: null 01:33:29 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:29 ... 7 common frames omitted 01:33:35 2024-10-24 01:33:35,108 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:33:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:35 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:35 Caused by: Ice.CommunicatorDestroyedException: null 01:33:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:35 ... 7 common frames omitted 01:33:36 2024-10-24 01:33:36,420 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:33:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:36 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:36 Caused by: Ice.CommunicatorDestroyedException: null 01:33:36 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:36 ... 7 common frames omitted 01:33:37 2024-10-24 01:33:37,639 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:33:37 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:37 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:37 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:37 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:37 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:37 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:37 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:37 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:37 Caused by: Ice.CommunicatorDestroyedException: null 01:33:37 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:37 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:37 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:37 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:37 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:37 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:37 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:37 ... 7 common frames omitted 01:33:38 2024-10-24 01:33:38,869 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:33:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:38 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:38 Caused by: Ice.CommunicatorDestroyedException: null 01:33:38 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:38 ... 7 common frames omitted 01:33:40 2024-10-24 01:33:40,133 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:33:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:40 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:40 Caused by: Ice.CommunicatorDestroyedException: null 01:33:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:40 ... 7 common frames omitted 01:33:41 2024-10-24 01:33:41,335 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:33:41 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:41 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:41 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:41 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:41 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:41 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:41 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:41 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:41 Caused by: Ice.CommunicatorDestroyedException: null 01:33:41 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:41 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:41 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:41 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:41 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:41 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:41 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:41 ... 7 common frames omitted 01:33:42 2024-10-24 01:33:42,707 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:33:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:42 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:42 Caused by: Ice.CommunicatorDestroyedException: null 01:33:42 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:42 ... 7 common frames omitted 01:33:43 2024-10-24 01:33:43,977 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:33:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:43 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:43 Caused by: Ice.CommunicatorDestroyedException: null 01:33:43 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:43 ... 7 common frames omitted 01:33:45 2024-10-24 01:33:45,255 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:33:45 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:45 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:45 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:45 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:45 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:45 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:45 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:45 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:45 Caused by: Ice.CommunicatorDestroyedException: null 01:33:45 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:45 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:45 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:45 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:45 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:45 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:45 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:45 ... 7 common frames omitted 01:33:46 2024-10-24 01:33:46,432 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:33:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:46 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:46 Caused by: Ice.CommunicatorDestroyedException: null 01:33:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:46 ... 7 common frames omitted 01:33:47 2024-10-24 01:33:47,662 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:33:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:47 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:47 Caused by: Ice.CommunicatorDestroyedException: null 01:33:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:47 ... 7 common frames omitted 01:33:48 2024-10-24 01:33:48,872 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:33:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:48 Caused by: Ice.CommunicatorDestroyedException: null 01:33:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:48 ... 7 common frames omitted 01:33:50 2024-10-24 01:33:50,100 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:33:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:50 Caused by: Ice.CommunicatorDestroyedException: null 01:33:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:50 ... 7 common frames omitted 01:33:51 2024-10-24 01:33:51,319 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:33:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:51 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:51 Caused by: Ice.CommunicatorDestroyedException: null 01:33:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:51 ... 7 common frames omitted 01:33:52 2024-10-24 01:33:52,550 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:33:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:52 Caused by: Ice.CommunicatorDestroyedException: null 01:33:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:52 ... 7 common frames omitted 01:33:53 2024-10-24 01:33:53,782 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:33:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:53 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:53 Caused by: Ice.CommunicatorDestroyedException: null 01:33:53 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:53 ... 7 common frames omitted 01:33:55 2024-10-24 01:33:55,068 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:33:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:55 Caused by: Ice.CommunicatorDestroyedException: null 01:33:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:55 ... 7 common frames omitted 01:33:56 2024-10-24 01:33:56,245 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:33:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:56 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:56 Caused by: Ice.CommunicatorDestroyedException: null 01:33:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:56 ... 7 common frames omitted 01:33:57 2024-10-24 01:33:57,443 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:33:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:57 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:57 Caused by: Ice.CommunicatorDestroyedException: null 01:33:57 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:57 ... 7 common frames omitted 01:33:58 2024-10-24 01:33:58,642 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:33:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:58 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:58 Caused by: Ice.CommunicatorDestroyedException: null 01:33:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:58 ... 7 common frames omitted 01:33:59 2024-10-24 01:33:59,889 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:33:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:33:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:33:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:33:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:33:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:33:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:33:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:33:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:33:59 at java.base/java.lang.Thread.run(Thread.java:829) 01:33:59 Caused by: Ice.CommunicatorDestroyedException: null 01:33:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:33:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:33:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:33:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:33:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:33:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:33:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:33:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:33:59 ... 7 common frames omitted 01:34:01 2024-10-24 01:34:01,215 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:34:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:01 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:01 Caused by: Ice.CommunicatorDestroyedException: null 01:34:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:01 ... 7 common frames omitted 01:34:02 2024-10-24 01:34:02,568 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:34:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:02 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:02 Caused by: Ice.CommunicatorDestroyedException: null 01:34:02 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:02 ... 7 common frames omitted 01:34:04 2024-10-24 01:34:04,066 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:34:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:04 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:04 Caused by: Ice.CommunicatorDestroyedException: null 01:34:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:04 ... 7 common frames omitted 01:34:05 2024-10-24 01:34:05,393 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:34:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:05 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:05 Caused by: Ice.CommunicatorDestroyedException: null 01:34:05 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:05 ... 7 common frames omitted 01:34:06 2024-10-24 01:34:06,682 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:34:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:06 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:06 Caused by: Ice.CommunicatorDestroyedException: null 01:34:06 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:06 ... 7 common frames omitted 01:34:08 2024-10-24 01:34:08,116 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:34:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:08 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:08 Caused by: Ice.CommunicatorDestroyedException: null 01:34:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:08 ... 7 common frames omitted 01:34:09 2024-10-24 01:34:09,349 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:34:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:09 Caused by: Ice.CommunicatorDestroyedException: null 01:34:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:09 ... 7 common frames omitted 01:34:10 2024-10-24 01:34:10,517 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:34:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:10 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:10 Caused by: Ice.CommunicatorDestroyedException: null 01:34:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:10 ... 7 common frames omitted 01:34:11 2024-10-24 01:34:11,766 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:34:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:11 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:11 Caused by: Ice.CommunicatorDestroyedException: null 01:34:11 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:11 ... 7 common frames omitted 01:34:13 2024-10-24 01:34:13,081 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:34:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:13 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:13 Caused by: Ice.CommunicatorDestroyedException: null 01:34:13 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:13 ... 7 common frames omitted 01:34:14 2024-10-24 01:34:14,294 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:34:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:14 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:14 Caused by: Ice.CommunicatorDestroyedException: null 01:34:14 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:14 ... 7 common frames omitted 01:34:15 2024-10-24 01:34:15,562 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:34:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:15 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:15 Caused by: Ice.CommunicatorDestroyedException: null 01:34:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:15 ... 7 common frames omitted 01:34:18 2024-10-24 01:34:18,335 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:34:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:18 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:18 Caused by: Ice.CommunicatorDestroyedException: null 01:34:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:18 ... 7 common frames omitted 01:34:21 2024-10-24 01:34:21,007 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:34:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:21 Caused by: Ice.CommunicatorDestroyedException: null 01:34:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:21 ... 7 common frames omitted 01:34:23 2024-10-24 01:34:23,573 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:34:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:23 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:23 Caused by: Ice.CommunicatorDestroyedException: null 01:34:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:23 ... 7 common frames omitted 01:34:26 2024-10-24 01:34:26,046 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:34:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:26 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:26 Caused by: Ice.CommunicatorDestroyedException: null 01:34:26 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:26 ... 7 common frames omitted 01:34:30 2024-10-24 01:34:30,659 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:34:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:30 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:30 Caused by: Ice.CommunicatorDestroyedException: null 01:34:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:30 ... 7 common frames omitted 01:34:34 2024-10-24 01:34:34,984 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:34:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:34 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:34 Caused by: Ice.CommunicatorDestroyedException: null 01:34:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:34 ... 7 common frames omitted 01:34:38 2024-10-24 01:34:38,982 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:34:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:38 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:38 Caused by: Ice.CommunicatorDestroyedException: null 01:34:38 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:38 ... 7 common frames omitted 01:34:53 2024-10-24 01:34:53,579 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:34:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:53 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:53 Caused by: Ice.CommunicatorDestroyedException: null 01:34:53 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:53 ... 7 common frames omitted 01:34:56 2024-10-24 01:34:56,010 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:34:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:56 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:56 Caused by: Ice.CommunicatorDestroyedException: null 01:34:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:56 ... 7 common frames omitted 01:34:58 2024-10-24 01:34:58,454 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:34:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:34:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:34:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:34:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:34:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:34:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:34:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:34:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:34:58 at java.base/java.lang.Thread.run(Thread.java:829) 01:34:58 Caused by: Ice.CommunicatorDestroyedException: null 01:34:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:34:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:34:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:34:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:34:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:34:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:34:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:34:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:34:58 ... 7 common frames omitted 01:35:00 2024-10-24 01:35:00,821 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:35:00 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:35:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:35:00 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:35:00 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:35:00 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:35:00 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:35:00 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:35:00 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:35:00 at java.base/java.lang.Thread.run(Thread.java:829) 01:35:00 Caused by: Ice.CommunicatorDestroyedException: null 01:35:00 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:35:00 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:35:00 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:35:00 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:35:00 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:35:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:35:00 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:35:00 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:35:00 ... 7 common frames omitted 01:39:13 2024-10-24 01:39:13,898 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:39:13 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:13 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:13 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:13 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:13 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:13 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:13 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:13 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:13 Caused by: Ice.CommunicatorDestroyedException: null 01:39:13 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:13 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:13 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:13 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:13 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:13 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:13 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:13 ... 7 common frames omitted 01:39:15 2024-10-24 01:39:15,476 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:39:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:15 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:15 Caused by: Ice.CommunicatorDestroyedException: null 01:39:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:15 ... 7 common frames omitted 01:39:16 2024-10-24 01:39:16,195 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 01:39:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:16 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:16 Caused by: Ice.CommunicatorDestroyedException: null 01:39:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:16 ... 7 common frames omitted 01:39:16 2024-10-24 01:39:16,947 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:39:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:16 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:16 Caused by: Ice.CommunicatorDestroyedException: null 01:39:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:16 ... 7 common frames omitted 01:39:17 2024-10-24 01:39:17,486 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:39:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:17 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:17 Caused by: Ice.CommunicatorDestroyedException: null 01:39:17 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:17 ... 7 common frames omitted 01:39:18 2024-10-24 01:39:18,715 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:39:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:18 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:18 Caused by: Ice.CommunicatorDestroyedException: null 01:39:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:18 ... 7 common frames omitted 01:39:19 2024-10-24 01:39:19,652 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:39:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:19 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:19 Caused by: Ice.CommunicatorDestroyedException: null 01:39:19 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:19 ... 7 common frames omitted 01:39:20 2024-10-24 01:39:20,798 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:39:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:20 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:20 Caused by: Ice.CommunicatorDestroyedException: null 01:39:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:20 ... 7 common frames omitted 01:39:21 2024-10-24 01:39:21,365 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:39:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:21 Caused by: Ice.CommunicatorDestroyedException: null 01:39:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:21 ... 7 common frames omitted 01:39:21 2024-10-24 01:39:21,910 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:39:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:21 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:21 Caused by: Ice.CommunicatorDestroyedException: null 01:39:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:21 ... 7 common frames omitted 01:39:22 2024-10-24 01:39:22,435 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 01:39:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:22 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:22 Caused by: Ice.CommunicatorDestroyedException: null 01:39:22 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:22 ... 7 common frames omitted 01:39:24 2024-10-24 01:39:24,830 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:39:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:39:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:39:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:39:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:39:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:39:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:39:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:39:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:39:24 at java.base/java.lang.Thread.run(Thread.java:829) 01:39:24 Caused by: Ice.CommunicatorDestroyedException: null 01:39:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:39:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:39:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:39:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:39:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:39:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:39:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:39:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:39:24 ... 7 common frames omitted 01:40:40 2024-10-24 01:40:40,090 ERROR [ ome.system.UpgradeCheck] (Response-1) Error reading from url: http://upgrade.openmicroscopy.org.uk?version=test;os.name=Linux;os.arch=amd64;os.version=5.14.0-427.40.1.el9_4.x86_64;java.runtime.version=11.0.24%2B8-LTS;java.vm.vendor=Red+Hat%2C+Inc. "connect timed out" 01:42:12 2024-10-24 01:42:12,538 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 01:42:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:12 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:12 Caused by: Ice.CommunicatorDestroyedException: null 01:42:12 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:12 ... 7 common frames omitted 01:42:17 2024-10-24 01:42:17,716 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:42:17 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:17 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:17 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:17 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:17 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:17 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:17 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:17 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:17 Caused by: Ice.CommunicatorDestroyedException: null 01:42:17 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:17 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:17 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:17 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:17 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:17 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:17 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:17 ... 7 common frames omitted 01:42:26 2024-10-24 01:42:26,506 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 01:42:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:26 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:26 Caused by: Ice.CommunicatorDestroyedException: null 01:42:26 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:26 ... 7 common frames omitted 01:42:48 2024-10-24 01:42:48,201 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:42:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:48 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:48 Caused by: Ice.CommunicatorDestroyedException: null 01:42:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:48 ... 7 common frames omitted 01:42:50 2024-10-24 01:42:50,307 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:42:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:50 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:50 Caused by: Ice.CommunicatorDestroyedException: null 01:42:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:50 ... 7 common frames omitted 01:42:52 2024-10-24 01:42:52,083 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:42:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:52 Caused by: Ice.CommunicatorDestroyedException: null 01:42:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:52 ... 7 common frames omitted 01:42:53 2024-10-24 01:42:53,889 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:42:53 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:53 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:53 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:53 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:53 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:53 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:53 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:53 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:53 Caused by: Ice.CommunicatorDestroyedException: null 01:42:53 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:53 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:53 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:53 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:53 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:53 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:53 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:53 ... 7 common frames omitted 01:42:55 2024-10-24 01:42:55,709 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:42:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:55 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:55 Caused by: Ice.CommunicatorDestroyedException: null 01:42:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:55 ... 7 common frames omitted 01:42:57 2024-10-24 01:42:57,477 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:42:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:57 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:57 Caused by: Ice.CommunicatorDestroyedException: null 01:42:57 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:57 ... 7 common frames omitted 01:42:59 2024-10-24 01:42:59,206 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:42:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:42:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:42:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:42:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:42:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:42:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:42:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:42:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:42:59 at java.base/java.lang.Thread.run(Thread.java:829) 01:42:59 Caused by: Ice.CommunicatorDestroyedException: null 01:42:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:42:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:42:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:42:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:42:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:42:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:42:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:42:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:42:59 ... 7 common frames omitted 01:43:01 2024-10-24 01:43:01,188 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:43:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:43:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:43:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:43:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:43:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:43:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:43:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:43:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:43:01 at java.base/java.lang.Thread.run(Thread.java:829) 01:43:01 Caused by: Ice.CommunicatorDestroyedException: null 01:43:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:43:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:43:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:43:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:43:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:43:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:43:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:43:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:43:01 ... 7 common frames omitted 01:43:02 2024-10-24 01:43:02,888 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:43:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:43:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:43:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:43:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:43:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:43:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:43:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:43:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:43:02 at java.base/java.lang.Thread.run(Thread.java:829) 01:43:02 Caused by: Ice.CommunicatorDestroyedException: null 01:43:02 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:43:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:43:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:43:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:43:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:43:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:43:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:43:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:43:02 ... 7 common frames omitted 01:43:04 2024-10-24 01:43:04,825 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:43:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:43:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:43:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:43:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:43:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:43:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:43:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:43:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:43:04 at java.base/java.lang.Thread.run(Thread.java:829) 01:43:04 Caused by: Ice.CommunicatorDestroyedException: null 01:43:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:43:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:43:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:43:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:43:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:43:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:43:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:43:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:43:04 ... 7 common frames omitted 01:43:06 2024-10-24 01:43:06,615 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 01:43:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:43:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:43:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:43:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:43:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:43:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:43:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:43:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:43:06 at java.base/java.lang.Thread.run(Thread.java:829) 01:43:06 Caused by: Ice.CommunicatorDestroyedException: null 01:43:06 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:43:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:43:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:43:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:43:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:43:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:43:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:43:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:43:06 ... 7 common frames omitted 01:43:08 2024-10-24 01:43:08,618 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 01:43:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:43:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:43:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:43:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:43:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:43:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:43:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:43:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:43:08 at java.base/java.lang.Thread.run(Thread.java:829) 01:43:08 Caused by: Ice.CommunicatorDestroyedException: null 01:43:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:43:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:43:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:43:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:43:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:43:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:43:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:43:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:43:08 ... 7 common frames omitted 01:43:09 2024-10-24 01:43:09,850 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 01:43:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:43:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:43:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:43:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:43:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:43:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:43:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:43:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:43:09 at java.base/java.lang.Thread.run(Thread.java:829) 01:43:09 Caused by: Ice.CommunicatorDestroyedException: null 01:43:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:43:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:43:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:43:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:43:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:43:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:43:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:43:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:43:09 ... 7 common frames omitted 01:49:03 2024-10-24 01:49:03,057 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 01:49:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:49:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:49:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:49:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:49:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:49:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:49:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:49:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:49:03 at java.base/java.lang.Thread.run(Thread.java:829) 01:49:03 Caused by: Ice.CommunicatorDestroyedException: null 01:49:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:49:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:49:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:49:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:49:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:49:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:49:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:49:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:49:03 ... 7 common frames omitted 01:49:49 2024-10-24 01:49:49,910 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 01:49:49 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:49:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:49:49 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:49:49 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:49:49 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:49:49 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:49:49 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:49:49 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:49:49 at java.base/java.lang.Thread.run(Thread.java:829) 01:49:49 Caused by: Ice.CommunicatorDestroyedException: null 01:49:49 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:49:49 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:49:49 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:49:49 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:49:49 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:49:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:49:49 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:49:49 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:49:49 ... 7 common frames omitted 01:49:52 2024-10-24 01:49:52,424 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 01:49:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 01:49:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 01:49:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 01:49:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 01:49:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 01:49:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 01:49:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 01:49:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 01:49:52 at java.base/java.lang.Thread.run(Thread.java:829) 01:49:52 Caused by: Ice.CommunicatorDestroyedException: null 01:49:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 01:49:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 01:49:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 01:49:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 01:49:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 01:49:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 01:49:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 01:49:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 01:49:52 ... 7 common frames omitted 02:03:50 Could not login with command line arguments.Glacier2.PermissionDeniedException 02:03:50 reason = "Password check failed for '023815ba-12ad-4aa1-976d-5786cc7d92df': [id=3014]" 02:03:50 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) 02:03:50 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) 02:03:50 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) 02:03:50 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490) 02:03:50 at java.base/java.lang.Class.newInstance(Class.java:584) 02:03:50 at IceInternal.BasicStream.createUserException(BasicStream.java:2785) 02:03:50 at IceInternal.BasicStream.access$300(BasicStream.java:14) 02:03:50 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620) 02:03:50 at IceInternal.BasicStream.throwException(BasicStream.java:2291) 02:03:50 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399) 02:03:50 at Glacier2.RouterPrxHelper.end_createSession(RouterPrxHelper.java:178) 02:03:50 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:49) 02:03:50 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:41) 02:03:50 at omero.client.createSession(client.java:776) 02:03:50 at omero.client.createSession(client.java:719) 02:03:50 at omero.gateway.Gateway.createSession(Gateway.java:1045) 02:03:50 at omero.gateway.Gateway.connect(Gateway.java:297) 02:03:50 at integration.gateway.GatewayUsageTest.testLoginFallback(GatewayUsageTest.java:154) 02:03:50 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 02:03:50 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 02:03:50 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 02:03:50 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 02:03:50 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135) 02:03:50 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44) 02:03:50 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72) 02:03:50 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10) 02:03:50 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 02:03:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:03:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:03:50 at java.base/java.lang.Thread.run(Thread.java:829) 02:03:50 Could not login with command line arguments.Glacier2.PermissionDeniedException 02:03:50 reason = "Password check failed for '023815ba-12ad-4aa1-976d-5786cc7d92df': [id=3014]" 02:03:50 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) 02:03:50 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) 02:03:50 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) 02:03:50 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490) 02:03:50 at java.base/java.lang.Class.newInstance(Class.java:584) 02:03:50 at IceInternal.BasicStream.createUserException(BasicStream.java:2785) 02:03:50 at IceInternal.BasicStream.access$300(BasicStream.java:14) 02:03:50 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620) 02:03:50 at IceInternal.BasicStream.throwException(BasicStream.java:2291) 02:03:50 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399) 02:03:50 at Glacier2.RouterPrxHelper.end_createSession(RouterPrxHelper.java:178) 02:03:50 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:49) 02:03:50 at Glacier2.RouterPrxHelper.createSession(RouterPrxHelper.java:41) 02:03:50 at omero.client.createSession(client.java:776) 02:03:50 at omero.client.createSession(client.java:719) 02:03:50 at omero.gateway.Gateway.createSession(Gateway.java:1045) 02:03:50 at omero.gateway.Gateway.connect(Gateway.java:297) 02:03:50 at integration.gateway.GatewayUsageTest.testLoginFallback(GatewayUsageTest.java:154) 02:03:50 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 02:03:50 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 02:03:50 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 02:03:50 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 02:03:50 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135) 02:03:50 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44) 02:03:50 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72) 02:03:50 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10) 02:03:50 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 02:03:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:03:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:03:50 at java.base/java.lang.Thread.run(Thread.java:829) 02:03:50 Exception in thread "TestNG-method=testLoginFallback-1" 02:04:04 Support for FileAnnotationData is deprecated. Use OriginalFile instead. 02:04:06 Could not load table dataomero.IllegalArgumentException: start value can't be greater than stop value 02:04:06 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:320) 02:04:06 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:220) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 02:04:06 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 02:04:06 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 02:04:06 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10) 02:04:06 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:04:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:04:06 Could not load table dataomero.IllegalArgumentException: start value can't be greater than stop value 02:04:06 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:320) 02:04:06 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:220) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 02:04:06 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 02:04:06 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 02:04:06 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10) 02:04:06 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:04:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:04:06 Exception in thread "TestNG-method=testInvalidParams-1" 02:04:06 Could not load table dataomero.IllegalArgumentException: step value is greater than the specified range 02:04:06 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:324) 02:04:06 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:229) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 02:04:06 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 02:04:06 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 02:04:06 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10) 02:04:06 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:04:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:04:06 Could not load table dataomero.IllegalArgumentException: step value is greater than the specified range 02:04:06 at omero.gateway.facility.TablesFacility.query(TablesFacility.java:324) 02:04:06 at integration.gateway.TablesFacilityTest.testInvalidParams(TablesFacilityTest.java:229) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 02:04:06 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 02:04:06 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 02:04:06 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 02:04:06 at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72) 02:04:06 at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10) 02:04:06 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:04:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:04:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:04:06 Exception in thread "TestNG-method=testInvalidParams-1" 02:04:06 No concrete type specified for column 'column1', using Object.toString() 02:04:07 Request rows 241 to 319; columns [4, 8, 6, 1] 02:04:08 Request rows 1823 to 1874; columns [9, 0, 5, 8, 2, 7, 10, 1] 02:04:10 Request rows 87 to 159; columns [] 02:04:12 Request rows 363 to 454; columns [6, 4, 2, 8, 5] 02:04:13 Request rows 1013 to 1080; columns [2, 3, 10, 0, 5, 9, 7] 02:04:35 2024-10-24 02:04:35,872 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:04:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:04:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:04:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:04:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:04:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:04:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:04:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:04:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:04:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:04:35 Caused by: Ice.CommunicatorDestroyedException: null 02:04:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:04:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:04:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:04:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:04:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:04:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:04:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:04:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:04:35 ... 7 common frames omitted 02:06:01 2024-10-24 02:06:01,894 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:06:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:01 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:01 Caused by: Ice.CommunicatorDestroyedException: null 02:06:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:01 ... 7 common frames omitted 02:06:06 2024-10-24 02:06:06,620 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:06:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:06 Caused by: Ice.CommunicatorDestroyedException: null 02:06:06 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:06 ... 7 common frames omitted 02:06:10 2024-10-24 02:06:10,768 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:06:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:10 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:10 Caused by: Ice.CommunicatorDestroyedException: null 02:06:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:10 ... 7 common frames omitted 02:06:15 2024-10-24 02:06:15,066 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:06:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:15 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:15 Caused by: Ice.CommunicatorDestroyedException: null 02:06:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:15 ... 7 common frames omitted 02:06:18 2024-10-24 02:06:18,736 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:06:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:18 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:18 Caused by: Ice.CommunicatorDestroyedException: null 02:06:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:18 ... 7 common frames omitted 02:06:22 2024-10-24 02:06:22,309 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:06:22 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:22 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:22 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:22 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:22 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:22 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:22 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:22 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:22 Caused by: Ice.CommunicatorDestroyedException: null 02:06:22 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:22 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:22 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:22 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:22 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:22 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:22 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:22 ... 7 common frames omitted 02:06:25 2024-10-24 02:06:25,771 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:06:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:25 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:25 Caused by: Ice.CommunicatorDestroyedException: null 02:06:25 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:25 ... 7 common frames omitted 02:06:29 2024-10-24 02:06:29,227 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:06:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:29 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:29 Caused by: Ice.CommunicatorDestroyedException: null 02:06:29 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:29 ... 7 common frames omitted 02:06:32 2024-10-24 02:06:32,693 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:06:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:32 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:32 Caused by: Ice.CommunicatorDestroyedException: null 02:06:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:32 ... 7 common frames omitted 02:06:34 2024-10-24 02:06:34,507 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:06:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:34 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:34 Caused by: Ice.CommunicatorDestroyedException: null 02:06:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:34 ... 7 common frames omitted 02:06:36 2024-10-24 02:06:36,288 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:06:36 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:36 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:36 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:36 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:36 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:36 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:36 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:36 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:36 Caused by: Ice.CommunicatorDestroyedException: null 02:06:36 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:36 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:36 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:36 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:36 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:36 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:36 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:36 ... 7 common frames omitted 02:06:38 2024-10-24 02:06:38,172 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:06:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:38 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:38 Caused by: Ice.CommunicatorDestroyedException: null 02:06:38 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:38 ... 7 common frames omitted 02:06:40 2024-10-24 02:06:40,732 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:06:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:40 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:40 Caused by: Ice.CommunicatorDestroyedException: null 02:06:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:40 ... 7 common frames omitted 02:06:43 2024-10-24 02:06:43,838 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:06:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:43 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:43 Caused by: Ice.CommunicatorDestroyedException: null 02:06:43 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:43 ... 7 common frames omitted 02:06:47 2024-10-24 02:06:47,089 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:06:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:47 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:47 Caused by: Ice.CommunicatorDestroyedException: null 02:06:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:47 ... 7 common frames omitted 02:06:50 2024-10-24 02:06:50,050 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:06:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:50 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:50 Caused by: Ice.CommunicatorDestroyedException: null 02:06:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:50 ... 7 common frames omitted 02:06:52 2024-10-24 02:06:52,301 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:06:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:52 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:52 Caused by: Ice.CommunicatorDestroyedException: null 02:06:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:52 ... 7 common frames omitted 02:06:54 2024-10-24 02:06:54,626 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:06:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:54 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:54 Caused by: Ice.CommunicatorDestroyedException: null 02:06:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:54 ... 7 common frames omitted 02:06:56 2024-10-24 02:06:56,979 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:06:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:56 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:56 Caused by: Ice.CommunicatorDestroyedException: null 02:06:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:56 ... 7 common frames omitted 02:06:59 2024-10-24 02:06:59,463 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:06:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:06:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:06:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:06:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:06:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:06:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:06:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:06:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:06:59 at java.base/java.lang.Thread.run(Thread.java:829) 02:06:59 Caused by: Ice.CommunicatorDestroyedException: null 02:06:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:06:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:06:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:06:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:06:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:06:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:06:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:06:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:06:59 ... 7 common frames omitted 02:07:01 2024-10-24 02:07:01,871 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:07:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:01 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:01 Caused by: Ice.CommunicatorDestroyedException: null 02:07:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:01 ... 7 common frames omitted 02:07:03 2024-10-24 02:07:03,286 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:07:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:03 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:03 Caused by: Ice.CommunicatorDestroyedException: null 02:07:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:03 ... 7 common frames omitted 02:07:04 2024-10-24 02:07:04,727 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:07:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:04 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:04 Caused by: Ice.CommunicatorDestroyedException: null 02:07:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:04 ... 7 common frames omitted 02:07:06 2024-10-24 02:07:06,217 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:07:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:06 Caused by: Ice.CommunicatorDestroyedException: null 02:07:06 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:06 ... 7 common frames omitted 02:07:08 2024-10-24 02:07:08,501 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:07:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:08 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:08 Caused by: Ice.CommunicatorDestroyedException: null 02:07:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:08 ... 7 common frames omitted 02:07:12 2024-10-24 02:07:12,636 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:07:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:12 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:12 Caused by: Ice.CommunicatorDestroyedException: null 02:07:12 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:12 ... 7 common frames omitted 02:07:16 2024-10-24 02:07:16,926 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:07:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:16 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:16 Caused by: Ice.CommunicatorDestroyedException: null 02:07:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:16 ... 7 common frames omitted 02:07:20 2024-10-24 02:07:20,967 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:07:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:20 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:20 Caused by: Ice.CommunicatorDestroyedException: null 02:07:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:20 ... 7 common frames omitted 02:07:25 2024-10-24 02:07:25,122 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:07:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:25 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:25 Caused by: Ice.CommunicatorDestroyedException: null 02:07:25 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:25 ... 7 common frames omitted 02:07:27 2024-10-24 02:07:27,242 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:07:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:27 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:27 Caused by: Ice.CommunicatorDestroyedException: null 02:07:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:27 ... 7 common frames omitted 02:07:28 2024-10-24 02:07:28,880 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:07:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:28 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:28 Caused by: Ice.CommunicatorDestroyedException: null 02:07:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:28 ... 7 common frames omitted 02:07:32 2024-10-24 02:07:32,523 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:07:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:32 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:32 Caused by: Ice.CommunicatorDestroyedException: null 02:07:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:32 ... 7 common frames omitted 02:07:35 2024-10-24 02:07:35,892 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:07:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:35 Caused by: Ice.CommunicatorDestroyedException: null 02:07:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:35 ... 7 common frames omitted 02:07:39 2024-10-24 02:07:39,458 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:07:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:39 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:39 Caused by: Ice.CommunicatorDestroyedException: null 02:07:39 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:39 ... 7 common frames omitted 02:07:42 2024-10-24 02:07:42,817 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:07:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:42 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:42 Caused by: Ice.CommunicatorDestroyedException: null 02:07:42 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:42 ... 7 common frames omitted 02:07:44 2024-10-24 02:07:44,694 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:07:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:44 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:44 Caused by: Ice.CommunicatorDestroyedException: null 02:07:44 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:44 ... 7 common frames omitted 02:07:46 2024-10-24 02:07:46,426 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:07:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:46 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:46 Caused by: Ice.CommunicatorDestroyedException: null 02:07:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:46 ... 7 common frames omitted 02:07:48 2024-10-24 02:07:48,357 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:07:48 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:07:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:07:48 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:07:48 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:07:48 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:07:48 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:07:48 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:07:48 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:07:48 at java.base/java.lang.Thread.run(Thread.java:829) 02:07:48 Caused by: Ice.CommunicatorDestroyedException: null 02:07:48 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:07:48 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:07:48 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:07:48 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:07:48 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:07:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:07:48 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:07:48 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:07:48 ... 7 common frames omitted 02:08:25 2024-10-24 02:08:25,479 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:08:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:08:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:08:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:08:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:08:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:08:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:08:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:08:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:08:25 at java.base/java.lang.Thread.run(Thread.java:829) 02:08:25 Caused by: Ice.CommunicatorDestroyedException: null 02:08:25 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:08:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:08:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:08:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:08:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:08:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:08:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:08:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:08:25 ... 7 common frames omitted 02:08:29 2024-10-24 02:08:29,950 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:08:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:08:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:08:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:08:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:08:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:08:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:08:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:08:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:08:29 at java.base/java.lang.Thread.run(Thread.java:829) 02:08:29 Caused by: Ice.CommunicatorDestroyedException: null 02:08:29 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:08:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:08:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:08:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:08:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:08:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:08:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:08:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:08:29 ... 7 common frames omitted 02:08:34 2024-10-24 02:08:34,441 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:08:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:08:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:08:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:08:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:08:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:08:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:08:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:08:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:08:34 at java.base/java.lang.Thread.run(Thread.java:829) 02:08:34 Caused by: Ice.CommunicatorDestroyedException: null 02:08:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:08:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:08:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:08:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:08:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:08:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:08:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:08:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:08:34 ... 7 common frames omitted 02:08:52 2024-10-24 02:08:52,892 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:08:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:08:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:08:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:08:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:08:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:08:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:08:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:08:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:08:52 at java.base/java.lang.Thread.run(Thread.java:829) 02:08:52 Caused by: Ice.CommunicatorDestroyedException: null 02:08:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:08:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:08:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:08:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:08:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:08:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:08:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:08:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:08:52 ... 7 common frames omitted 02:09:35 2024-10-24 02:09:35,326 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:09:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:35 Caused by: Ice.CommunicatorDestroyedException: null 02:09:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:35 ... 7 common frames omitted 02:09:46 2024-10-24 02:09:46,179 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:09:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:46 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:46 Caused by: Ice.CommunicatorDestroyedException: null 02:09:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:46 ... 7 common frames omitted 02:09:47 2024-10-24 02:09:47,484 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:09:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:47 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:47 Caused by: Ice.CommunicatorDestroyedException: null 02:09:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:47 ... 7 common frames omitted 02:09:50 2024-10-24 02:09:50,037 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:09:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:50 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:50 Caused by: Ice.CommunicatorDestroyedException: null 02:09:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:50 ... 7 common frames omitted 02:09:51 2024-10-24 02:09:51,374 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:09:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:51 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:51 Caused by: Ice.CommunicatorDestroyedException: null 02:09:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:51 ... 7 common frames omitted 02:09:52 2024-10-24 02:09:52,610 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:09:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:52 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:52 Caused by: Ice.CommunicatorDestroyedException: null 02:09:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:52 ... 7 common frames omitted 02:09:54 2024-10-24 02:09:54,734 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:09:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:54 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:54 Caused by: Ice.CommunicatorDestroyedException: null 02:09:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:54 ... 7 common frames omitted 02:09:56 2024-10-24 02:09:56,066 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:09:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:56 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:56 Caused by: Ice.CommunicatorDestroyedException: null 02:09:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:56 ... 7 common frames omitted 02:09:57 2024-10-24 02:09:57,243 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:09:57 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:57 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:57 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:57 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:57 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:57 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:57 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:57 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:57 Caused by: Ice.CommunicatorDestroyedException: null 02:09:57 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:57 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:57 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:57 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:57 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:57 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:57 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:57 ... 7 common frames omitted 02:09:58 2024-10-24 02:09:58,508 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:09:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:09:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:09:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:09:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:09:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:09:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:09:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:09:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:09:58 at java.base/java.lang.Thread.run(Thread.java:829) 02:09:58 Caused by: Ice.CommunicatorDestroyedException: null 02:09:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:09:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:09:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:09:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:09:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:09:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:09:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:09:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:09:58 ... 7 common frames omitted 02:10:01 2024-10-24 02:10:01,257 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:10:01 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:01 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:01 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:01 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:01 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:01 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:01 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:01 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:01 Caused by: Ice.CommunicatorDestroyedException: null 02:10:01 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:01 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:01 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:01 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:01 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:01 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:01 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:01 ... 7 common frames omitted 02:10:02 2024-10-24 02:10:02,107 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:10:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:02 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:02 Caused by: Ice.CommunicatorDestroyedException: null 02:10:02 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:02 ... 7 common frames omitted 02:10:03 2024-10-24 02:10:03,401 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:10:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:03 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:03 Caused by: Ice.CommunicatorDestroyedException: null 02:10:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:03 ... 7 common frames omitted 02:10:04 2024-10-24 02:10:04,252 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:10:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:04 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:04 Caused by: Ice.CommunicatorDestroyedException: null 02:10:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:04 ... 7 common frames omitted 02:10:05 2024-10-24 02:10:05,617 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:10:05 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:05 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:05 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:05 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:05 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:05 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:05 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:05 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:05 Caused by: Ice.CommunicatorDestroyedException: null 02:10:05 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:05 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:05 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:05 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:05 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:05 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:05 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:05 ... 7 common frames omitted 02:10:06 2024-10-24 02:10:06,458 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:10:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:06 Caused by: Ice.CommunicatorDestroyedException: null 02:10:06 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:06 ... 7 common frames omitted 02:10:07 2024-10-24 02:10:07,688 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:10:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:07 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:07 Caused by: Ice.CommunicatorDestroyedException: null 02:10:07 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:07 ... 7 common frames omitted 02:10:08 2024-10-24 02:10:08,501 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:10:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:08 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:08 Caused by: Ice.CommunicatorDestroyedException: null 02:10:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:08 ... 7 common frames omitted 02:10:09 2024-10-24 02:10:09,990 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:10:09 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:09 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:09 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:09 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:09 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:09 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:09 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:09 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:09 Caused by: Ice.CommunicatorDestroyedException: null 02:10:09 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:09 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:09 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:09 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:09 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:09 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:09 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:09 ... 7 common frames omitted 02:10:10 2024-10-24 02:10:10,834 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:10:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:10 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:10 Caused by: Ice.CommunicatorDestroyedException: null 02:10:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:10 ... 7 common frames omitted 02:10:12 2024-10-24 02:10:12,065 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:10:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:12 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:12 Caused by: Ice.CommunicatorDestroyedException: null 02:10:12 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:12 ... 7 common frames omitted 02:10:12 2024-10-24 02:10:12,862 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:10:12 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:12 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:12 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:12 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:12 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:12 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:12 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:12 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:12 Caused by: Ice.CommunicatorDestroyedException: null 02:10:12 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:12 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:12 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:12 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:12 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:12 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:12 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:12 ... 7 common frames omitted 02:10:14 2024-10-24 02:10:14,074 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:10:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:14 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:14 Caused by: Ice.CommunicatorDestroyedException: null 02:10:14 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:14 ... 7 common frames omitted 02:10:14 2024-10-24 02:10:14,884 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:10:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:14 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:14 Caused by: Ice.CommunicatorDestroyedException: null 02:10:14 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:14 ... 7 common frames omitted 02:10:16 2024-10-24 02:10:16,066 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:10:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:16 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:16 Caused by: Ice.CommunicatorDestroyedException: null 02:10:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:16 ... 7 common frames omitted 02:10:16 2024-10-24 02:10:16,981 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:10:16 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:16 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:16 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:16 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:16 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:16 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:16 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:16 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:16 Caused by: Ice.CommunicatorDestroyedException: null 02:10:16 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:16 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:16 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:16 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:16 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:16 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:16 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:16 ... 7 common frames omitted 02:10:18 2024-10-24 02:10:18,415 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:10:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:18 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:18 Caused by: Ice.CommunicatorDestroyedException: null 02:10:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:18 ... 7 common frames omitted 02:10:19 2024-10-24 02:10:19,247 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:10:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:19 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:19 Caused by: Ice.CommunicatorDestroyedException: null 02:10:19 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:19 ... 7 common frames omitted 02:10:20 2024-10-24 02:10:20,699 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:10:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:20 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:20 Caused by: Ice.CommunicatorDestroyedException: null 02:10:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:20 ... 7 common frames omitted 02:10:21 2024-10-24 02:10:21,535 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:10:21 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:21 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:21 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:21 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:21 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:21 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:21 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:21 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:21 Caused by: Ice.CommunicatorDestroyedException: null 02:10:21 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:21 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:21 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:21 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:21 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:21 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:21 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:21 ... 7 common frames omitted 02:10:23 2024-10-24 02:10:23,018 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:10:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:23 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:23 Caused by: Ice.CommunicatorDestroyedException: null 02:10:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:23 ... 7 common frames omitted 02:10:23 2024-10-24 02:10:23,940 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:10:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:23 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:23 Caused by: Ice.CommunicatorDestroyedException: null 02:10:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:23 ... 7 common frames omitted 02:10:25 2024-10-24 02:10:25,281 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:10:25 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:25 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:25 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:25 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:25 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:25 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:25 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:25 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:25 Caused by: Ice.CommunicatorDestroyedException: null 02:10:25 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:25 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:25 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:25 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:25 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:25 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:25 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:25 ... 7 common frames omitted 02:10:26 2024-10-24 02:10:26,169 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:10:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:26 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:26 Caused by: Ice.CommunicatorDestroyedException: null 02:10:26 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:26 ... 7 common frames omitted 02:10:27 2024-10-24 02:10:27,589 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:10:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:27 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:27 Caused by: Ice.CommunicatorDestroyedException: null 02:10:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:27 ... 7 common frames omitted 02:10:28 2024-10-24 02:10:28,414 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:10:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:28 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:28 Caused by: Ice.CommunicatorDestroyedException: null 02:10:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:28 ... 7 common frames omitted 02:10:29 2024-10-24 02:10:29,839 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:10:29 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:29 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:29 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:29 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:29 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:29 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:29 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:29 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:29 Caused by: Ice.CommunicatorDestroyedException: null 02:10:29 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:29 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:29 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:29 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:29 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:29 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:29 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:29 ... 7 common frames omitted 02:10:30 2024-10-24 02:10:30,703 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:10:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:30 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:30 Caused by: Ice.CommunicatorDestroyedException: null 02:10:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:30 ... 7 common frames omitted 02:10:32 2024-10-24 02:10:32,103 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:10:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:32 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:32 Caused by: Ice.CommunicatorDestroyedException: null 02:10:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:32 ... 7 common frames omitted 02:10:32 2024-10-24 02:10:32,932 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:10:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:32 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:32 Caused by: Ice.CommunicatorDestroyedException: null 02:10:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:32 ... 7 common frames omitted 02:10:34 2024-10-24 02:10:34,395 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:10:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:34 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:34 Caused by: Ice.CommunicatorDestroyedException: null 02:10:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:34 ... 7 common frames omitted 02:10:35 2024-10-24 02:10:35,224 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:10:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:35 Caused by: Ice.CommunicatorDestroyedException: null 02:10:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:35 ... 7 common frames omitted 02:10:39 2024-10-24 02:10:39,645 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:10:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:39 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:39 Caused by: Ice.CommunicatorDestroyedException: null 02:10:39 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:39 ... 7 common frames omitted 02:10:40 2024-10-24 02:10:40,526 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:10:40 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:40 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:40 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:40 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:40 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:40 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:40 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:40 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:40 Caused by: Ice.CommunicatorDestroyedException: null 02:10:40 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:40 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:40 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:40 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:40 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:40 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:40 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:40 ... 7 common frames omitted 02:10:47 2024-10-24 02:10:47,015 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:10:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:47 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:47 Caused by: Ice.CommunicatorDestroyedException: null 02:10:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:47 ... 7 common frames omitted 02:10:47 2024-10-24 02:10:47,887 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:10:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:47 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:47 Caused by: Ice.CommunicatorDestroyedException: null 02:10:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:47 ... 7 common frames omitted 02:10:55 2024-10-24 02:10:55,385 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:10:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:55 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:55 Caused by: Ice.CommunicatorDestroyedException: null 02:10:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:55 ... 7 common frames omitted 02:10:56 2024-10-24 02:10:56,249 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:10:56 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:10:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:10:56 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:10:56 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:10:56 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:10:56 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:10:56 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:10:56 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:10:56 at java.base/java.lang.Thread.run(Thread.java:829) 02:10:56 Caused by: Ice.CommunicatorDestroyedException: null 02:10:56 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:10:56 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:10:56 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:10:56 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:10:56 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:10:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:10:56 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:10:56 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:10:56 ... 7 common frames omitted 02:11:02 2024-10-24 02:11:02,575 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:11:02 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:02 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:02 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:02 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:02 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:02 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:02 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:02 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:02 Caused by: Ice.CommunicatorDestroyedException: null 02:11:02 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:02 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:02 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:02 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:02 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:02 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:02 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:02 ... 7 common frames omitted 02:11:03 2024-10-24 02:11:03,493 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:11:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:03 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:03 Caused by: Ice.CommunicatorDestroyedException: null 02:11:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:03 ... 7 common frames omitted 02:11:06 2024-10-24 02:11:06,859 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:11:06 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:06 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:06 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:06 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:06 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:06 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:06 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:06 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:06 Caused by: Ice.CommunicatorDestroyedException: null 02:11:06 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:06 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:06 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:06 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:06 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:06 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:06 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:06 ... 7 common frames omitted 02:11:07 2024-10-24 02:11:07,686 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:11:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:07 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:07 Caused by: Ice.CommunicatorDestroyedException: null 02:11:07 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:07 ... 7 common frames omitted 02:11:10 2024-10-24 02:11:10,985 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:11:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:10 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:10 Caused by: Ice.CommunicatorDestroyedException: null 02:11:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:10 ... 7 common frames omitted 02:11:11 2024-10-24 02:11:11,811 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:11:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:11 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:11 Caused by: Ice.CommunicatorDestroyedException: null 02:11:11 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:11 ... 7 common frames omitted 02:11:23 2024-10-24 02:11:23,333 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:11:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:23 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:23 Caused by: Ice.CommunicatorDestroyedException: null 02:11:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:23 ... 7 common frames omitted 02:11:24 2024-10-24 02:11:24,180 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:11:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:24 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:24 Caused by: Ice.CommunicatorDestroyedException: null 02:11:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:24 ... 7 common frames omitted 02:11:30 2024-10-24 02:11:30,632 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:11:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:30 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:30 Caused by: Ice.CommunicatorDestroyedException: null 02:11:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:30 ... 7 common frames omitted 02:11:31 2024-10-24 02:11:31,427 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:11:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:31 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:31 Caused by: Ice.CommunicatorDestroyedException: null 02:11:31 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:31 ... 7 common frames omitted 02:11:34 2024-10-24 02:11:34,848 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:11:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:34 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:34 Caused by: Ice.CommunicatorDestroyedException: null 02:11:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:34 ... 7 common frames omitted 02:11:35 2024-10-24 02:11:35,702 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:11:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:35 Caused by: Ice.CommunicatorDestroyedException: null 02:11:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:35 ... 7 common frames omitted 02:11:39 2024-10-24 02:11:39,066 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:11:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:39 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:39 Caused by: Ice.CommunicatorDestroyedException: null 02:11:39 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:39 ... 7 common frames omitted 02:11:39 2024-10-24 02:11:39,916 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:11:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:39 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:39 Caused by: Ice.CommunicatorDestroyedException: null 02:11:39 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:39 ... 7 common frames omitted 02:11:46 2024-10-24 02:11:46,343 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:11:46 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:46 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:46 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:46 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:46 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:46 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:46 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:46 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:46 Caused by: Ice.CommunicatorDestroyedException: null 02:11:46 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:46 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:46 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:46 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:46 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:46 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:46 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:46 ... 7 common frames omitted 02:11:47 2024-10-24 02:11:47,167 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:11:47 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:47 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:47 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:47 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:47 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:47 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:47 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:47 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:47 Caused by: Ice.CommunicatorDestroyedException: null 02:11:47 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:47 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:47 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:47 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:47 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:47 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:47 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:47 ... 7 common frames omitted 02:11:50 2024-10-24 02:11:50,624 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:11:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:50 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:50 Caused by: Ice.CommunicatorDestroyedException: null 02:11:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:50 ... 7 common frames omitted 02:11:51 2024-10-24 02:11:51,423 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:11:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:51 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:51 Caused by: Ice.CommunicatorDestroyedException: null 02:11:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:51 ... 7 common frames omitted 02:11:55 2024-10-24 02:11:55,035 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:11:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:55 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:55 Caused by: Ice.CommunicatorDestroyedException: null 02:11:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:55 ... 7 common frames omitted 02:11:55 2024-10-24 02:11:55,892 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:11:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:11:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:11:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:11:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:11:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:11:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:11:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:11:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:11:55 at java.base/java.lang.Thread.run(Thread.java:829) 02:11:55 Caused by: Ice.CommunicatorDestroyedException: null 02:11:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:11:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:11:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:11:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:11:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:11:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:11:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:11:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:11:55 ... 7 common frames omitted 02:12:03 2024-10-24 02:12:03,422 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:12:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:03 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:03 Caused by: Ice.CommunicatorDestroyedException: null 02:12:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:03 ... 7 common frames omitted 02:12:04 2024-10-24 02:12:04,253 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:12:04 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:04 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:04 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:04 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:04 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:04 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:04 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:04 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:04 Caused by: Ice.CommunicatorDestroyedException: null 02:12:04 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:04 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:04 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:04 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:04 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:04 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:04 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:04 ... 7 common frames omitted 02:12:10 2024-10-24 02:12:10,942 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:12:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:10 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:10 Caused by: Ice.CommunicatorDestroyedException: null 02:12:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:10 ... 7 common frames omitted 02:12:11 2024-10-24 02:12:11,861 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:12:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:11 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:11 Caused by: Ice.CommunicatorDestroyedException: null 02:12:11 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:11 ... 7 common frames omitted 02:12:19 2024-10-24 02:12:19,345 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:12:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:19 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:19 Caused by: Ice.CommunicatorDestroyedException: null 02:12:19 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:19 ... 7 common frames omitted 02:12:20 2024-10-24 02:12:20,255 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:12:20 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:20 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:20 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:20 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:20 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:20 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:20 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:20 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:20 Caused by: Ice.CommunicatorDestroyedException: null 02:12:20 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:20 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:20 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:20 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:20 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:20 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:20 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:20 ... 7 common frames omitted 02:12:26 2024-10-24 02:12:26,717 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:12:26 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:26 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:26 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:26 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:26 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:26 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:26 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:26 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:26 Caused by: Ice.CommunicatorDestroyedException: null 02:12:26 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:26 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:26 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:26 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:26 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:26 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:26 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:26 ... 7 common frames omitted 02:12:27 2024-10-24 02:12:27,562 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:12:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:27 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:27 Caused by: Ice.CommunicatorDestroyedException: null 02:12:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:27 ... 7 common frames omitted 02:12:30 2024-10-24 02:12:30,813 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:12:30 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:30 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:30 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:30 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:30 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:30 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:30 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:30 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:30 Caused by: Ice.CommunicatorDestroyedException: null 02:12:30 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:30 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:30 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:30 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:30 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:30 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:30 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:30 ... 7 common frames omitted 02:12:31 2024-10-24 02:12:31,658 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:12:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:31 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:31 Caused by: Ice.CommunicatorDestroyedException: null 02:12:31 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:31 ... 7 common frames omitted 02:12:34 2024-10-24 02:12:34,931 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:12:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:34 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:34 Caused by: Ice.CommunicatorDestroyedException: null 02:12:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:34 ... 7 common frames omitted 02:12:35 2024-10-24 02:12:35,799 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:12:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:35 Caused by: Ice.CommunicatorDestroyedException: null 02:12:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:35 ... 7 common frames omitted 02:12:43 2024-10-24 02:12:43,169 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:12:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:43 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:43 Caused by: Ice.CommunicatorDestroyedException: null 02:12:43 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:43 ... 7 common frames omitted 02:12:44 2024-10-24 02:12:44,068 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:12:44 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:44 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:44 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:44 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:44 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:44 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:44 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:44 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:44 Caused by: Ice.CommunicatorDestroyedException: null 02:12:44 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:44 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:44 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:44 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:44 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:44 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:44 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:44 ... 7 common frames omitted 02:12:50 2024-10-24 02:12:50,467 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:12:50 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:50 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:50 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:50 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:50 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:50 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:50 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:50 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:50 Caused by: Ice.CommunicatorDestroyedException: null 02:12:50 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:50 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:50 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:50 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:50 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:50 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:50 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:50 ... 7 common frames omitted 02:12:51 2024-10-24 02:12:51,301 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:12:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:51 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:51 Caused by: Ice.CommunicatorDestroyedException: null 02:12:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:51 ... 7 common frames omitted 02:12:54 2024-10-24 02:12:54,804 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:12:54 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:54 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:54 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:54 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:54 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:54 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:54 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:54 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:54 Caused by: Ice.CommunicatorDestroyedException: null 02:12:54 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:54 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:54 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:54 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:54 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:54 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:54 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:54 ... 7 common frames omitted 02:12:55 2024-10-24 02:12:55,648 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:12:55 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:55 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:55 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:55 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:55 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:55 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:55 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:55 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:55 Caused by: Ice.CommunicatorDestroyedException: null 02:12:55 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:55 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:55 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:55 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:55 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:55 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:55 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:55 ... 7 common frames omitted 02:12:59 2024-10-24 02:12:59,050 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:12:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:59 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:59 Caused by: Ice.CommunicatorDestroyedException: null 02:12:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:59 ... 7 common frames omitted 02:12:59 2024-10-24 02:12:59,902 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:12:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:12:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:12:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:12:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:12:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:12:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:12:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:12:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:12:59 at java.base/java.lang.Thread.run(Thread.java:829) 02:12:59 Caused by: Ice.CommunicatorDestroyedException: null 02:12:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:12:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:12:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:12:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:12:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:12:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:12:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:12:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:12:59 ... 7 common frames omitted 02:13:07 2024-10-24 02:13:07,291 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:13:07 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:07 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:07 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:07 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:07 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:07 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:07 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:07 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:07 Caused by: Ice.CommunicatorDestroyedException: null 02:13:07 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:07 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:07 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:07 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:07 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:07 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:07 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:07 ... 7 common frames omitted 02:13:08 2024-10-24 02:13:08,074 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:13:08 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:08 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:08 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:08 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:08 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:08 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:08 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:08 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:08 Caused by: Ice.CommunicatorDestroyedException: null 02:13:08 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:08 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:08 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:08 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:08 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:08 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:08 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:08 ... 7 common frames omitted 02:13:14 2024-10-24 02:13:14,608 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:13:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:14 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:14 Caused by: Ice.CommunicatorDestroyedException: null 02:13:14 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:14 ... 7 common frames omitted 02:13:15 2024-10-24 02:13:15,467 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:13:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:15 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:15 Caused by: Ice.CommunicatorDestroyedException: null 02:13:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:15 ... 7 common frames omitted 02:13:18 2024-10-24 02:13:18,906 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:13:18 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:18 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:18 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:18 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:18 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:18 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:18 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:18 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:18 Caused by: Ice.CommunicatorDestroyedException: null 02:13:18 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:18 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:18 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:18 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:18 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:18 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:18 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:18 ... 7 common frames omitted 02:13:19 2024-10-24 02:13:19,787 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:13:19 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:19 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:19 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:19 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:19 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:19 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:19 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:19 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:19 Caused by: Ice.CommunicatorDestroyedException: null 02:13:19 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:19 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:19 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:19 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:19 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:19 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:19 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:19 ... 7 common frames omitted 02:13:27 2024-10-24 02:13:27,260 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:13:27 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:27 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:27 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:27 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:27 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:27 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:27 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:27 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:27 Caused by: Ice.CommunicatorDestroyedException: null 02:13:27 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:27 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:27 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:27 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:27 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:27 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:27 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:27 ... 7 common frames omitted 02:13:28 2024-10-24 02:13:28,147 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:13:28 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:28 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:28 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:28 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:28 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:28 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:28 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:28 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:28 Caused by: Ice.CommunicatorDestroyedException: null 02:13:28 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:28 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:28 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:28 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:28 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:28 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:28 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:28 ... 7 common frames omitted 02:13:34 2024-10-24 02:13:34,555 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:13:34 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:34 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:34 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:34 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:34 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:34 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:34 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:34 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:34 Caused by: Ice.CommunicatorDestroyedException: null 02:13:34 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:34 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:34 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:34 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:34 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:34 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:34 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:34 ... 7 common frames omitted 02:13:35 2024-10-24 02:13:35,365 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:13:35 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:35 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:35 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:35 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:35 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:35 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:35 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:35 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:35 Caused by: Ice.CommunicatorDestroyedException: null 02:13:35 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:35 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:35 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:35 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:35 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:35 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:35 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:35 ... 7 common frames omitted 02:13:38 2024-10-24 02:13:38,697 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:13:38 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:38 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:38 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:38 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:38 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:38 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:38 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:38 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:38 Caused by: Ice.CommunicatorDestroyedException: null 02:13:38 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:38 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:38 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:38 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:38 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:38 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:38 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:38 ... 7 common frames omitted 02:13:39 2024-10-24 02:13:39,515 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:13:39 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:39 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:39 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:39 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:39 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:39 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:39 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:39 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:39 Caused by: Ice.CommunicatorDestroyedException: null 02:13:39 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:39 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:39 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:39 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:39 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:39 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:39 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:39 ... 7 common frames omitted 02:13:42 2024-10-24 02:13:42,841 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:13:42 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:42 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:42 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:42 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:42 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:42 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:42 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:42 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:42 Caused by: Ice.CommunicatorDestroyedException: null 02:13:42 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:42 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:42 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:42 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:42 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:42 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:42 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:42 ... 7 common frames omitted 02:13:43 2024-10-24 02:13:43,701 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:13:43 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:43 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:43 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:43 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:43 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:43 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:43 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:43 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:43 Caused by: Ice.CommunicatorDestroyedException: null 02:13:43 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:43 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:43 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:43 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:43 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:43 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:43 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:43 ... 7 common frames omitted 02:13:51 2024-10-24 02:13:51,209 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:13:51 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:51 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:51 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:51 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:51 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:51 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:51 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:51 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:51 Caused by: Ice.CommunicatorDestroyedException: null 02:13:51 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:51 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:51 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:51 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:51 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:51 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:51 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:51 ... 7 common frames omitted 02:13:52 2024-10-24 02:13:52,017 ERROR [ o.formats.importer.util.ClientKeepAlive] (6-thread-1) Exception while executing ping(), logging Connector out: 02:13:52 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:52 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:52 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:52 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:52 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:52 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:52 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:52 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:52 Caused by: Ice.CommunicatorDestroyedException: null 02:13:52 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:52 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:52 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:52 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:52 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:52 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:52 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:52 ... 7 common frames omitted 02:13:58 2024-10-24 02:13:58,684 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:13:58 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:58 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:58 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:58 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:58 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:58 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:58 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:58 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:58 Caused by: Ice.CommunicatorDestroyedException: null 02:13:58 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:58 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:58 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:58 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:58 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:58 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:58 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:58 ... 7 common frames omitted 02:13:59 2024-10-24 02:13:59,494 ERROR [ o.formats.importer.util.ClientKeepAlive] (9-thread-1) Exception while executing ping(), logging Connector out: 02:13:59 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:13:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:13:59 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:13:59 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:13:59 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:13:59 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:13:59 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:13:59 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:13:59 at java.base/java.lang.Thread.run(Thread.java:829) 02:13:59 Caused by: Ice.CommunicatorDestroyedException: null 02:13:59 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:13:59 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:13:59 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:13:59 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:13:59 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:13:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:13:59 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:13:59 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:13:59 ... 7 common frames omitted 02:14:03 2024-10-24 02:14:03,075 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:14:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:03 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:03 Caused by: Ice.CommunicatorDestroyedException: null 02:14:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:03 ... 7 common frames omitted 02:14:03 2024-10-24 02:14:03,950 ERROR [ o.formats.importer.util.ClientKeepAlive] (2-thread-1) Exception while executing ping(), logging Connector out: 02:14:03 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:03 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:03 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:03 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:03 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:03 Caused by: Ice.CommunicatorDestroyedException: null 02:14:03 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:03 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:03 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:03 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:03 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:03 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:03 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:03 ... 7 common frames omitted 02:14:10 2024-10-24 02:14:10,593 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:14:10 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:10 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:10 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:10 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:10 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:10 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:10 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:10 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:10 Caused by: Ice.CommunicatorDestroyedException: null 02:14:10 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:10 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:10 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:10 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:10 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:10 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:10 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:10 ... 7 common frames omitted 02:14:11 2024-10-24 02:14:11,417 ERROR [ o.formats.importer.util.ClientKeepAlive] (5-thread-1) Exception while executing ping(), logging Connector out: 02:14:11 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:11 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:11 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:11 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:11 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:11 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:11 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:11 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:11 Caused by: Ice.CommunicatorDestroyedException: null 02:14:11 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:11 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:11 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:11 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:11 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:11 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:11 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:11 ... 7 common frames omitted 02:14:14 2024-10-24 02:14:14,995 ERROR [ o.formats.importer.util.ClientKeepAlive] (7-thread-1) Exception while executing ping(), logging Connector out: 02:14:14 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:14 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:14 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:14 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:14 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:14 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:14 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:14 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:14 Caused by: Ice.CommunicatorDestroyedException: null 02:14:14 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:14 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:14 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:14 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:14 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:14 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:14 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:14 ... 7 common frames omitted 02:14:15 2024-10-24 02:14:15,936 ERROR [ o.formats.importer.util.ClientKeepAlive] (8-thread-1) Exception while executing ping(), logging Connector out: 02:14:15 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:15 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:15 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:15 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:15 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:15 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:15 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:15 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:15 Caused by: Ice.CommunicatorDestroyedException: null 02:14:15 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:15 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:15 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:15 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:15 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:15 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:15 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:15 ... 7 common frames omitted 02:14:23 2024-10-24 02:14:23,534 ERROR [ o.formats.importer.util.ClientKeepAlive] (0-thread-1) Exception while executing ping(), logging Connector out: 02:14:23 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:23 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:23 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:23 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:23 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:23 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:23 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:23 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:23 Caused by: Ice.CommunicatorDestroyedException: null 02:14:23 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:23 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:23 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:23 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:23 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:23 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:23 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:23 ... 7 common frames omitted 02:14:24 2024-10-24 02:14:24,560 ERROR [ o.formats.importer.util.ClientKeepAlive] (1-thread-1) Exception while executing ping(), logging Connector out: 02:14:24 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:24 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:24 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:24 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:24 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:24 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:24 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:24 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:24 Caused by: Ice.CommunicatorDestroyedException: null 02:14:24 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:24 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:24 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:24 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:24 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:24 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:24 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:24 ... 7 common frames omitted 02:14:30 =============================================== 02:14:30 OmeroJava.integration 02:14:30 Total tests run: 2589, Passes: 2588, Failures: 1, Skips: 0 02:14:30 =============================================== 02:14:31 2024-10-24 02:14:31,275 ERROR [ o.formats.importer.util.ClientKeepAlive] (3-thread-1) Exception while executing ping(), logging Connector out: 02:14:31 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:31 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:31 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:31 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:31 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:31 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:31 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:31 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:31 Caused by: Ice.CommunicatorDestroyedException: null 02:14:31 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:31 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:31 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:31 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:31 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:31 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:31 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:31 ... 7 common frames omitted 02:14:32 2024-10-24 02:14:32,174 ERROR [ o.formats.importer.util.ClientKeepAlive] (4-thread-1) Exception while executing ping(), logging Connector out: 02:14:32 java.lang.RuntimeException: Ice.CommunicatorDestroyedException 02:14:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:845) 02:14:32 at ome.formats.importer.util.ClientKeepAlive.run(ClientKeepAlive.java:77) 02:14:32 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 02:14:32 at java.base/java.util.concurrent.FutureTask.runAndReset(FutureTask.java:305) 02:14:32 at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:305) 02:14:32 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 02:14:32 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 02:14:32 at java.base/java.lang.Thread.run(Thread.java:829) 02:14:32 Caused by: Ice.CommunicatorDestroyedException: null 02:14:32 at IceInternal.Instance.proxyFactory(Instance.java:239) 02:14:32 at IceInternal.BasicStream.writeProxy(BasicStream.java:2142) 02:14:32 at omero.api.ServiceInterfacePrxHelper.__write(ServiceInterfacePrxHelper.java:114) 02:14:32 at omero.api.ServiceListHelper.write(ServiceListHelper.java:37) 02:14:32 at omero.api.ServiceFactoryPrxHelper.begin_keepAllAlive(ServiceFactoryPrxHelper.java:5946) 02:14:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5846) 02:14:32 at omero.api.ServiceFactoryPrxHelper.keepAllAlive(ServiceFactoryPrxHelper.java:5833) 02:14:32 at ome.formats.OMEROMetadataStoreClient.ping(OMEROMetadataStoreClient.java:838) 02:14:32 ... 7 common frames omitted 02:14:32 The tests failed. 02:14:32 02:14:32 BUILD SUCCESSFUL 02:14:32 Total time: 65 minutes 20 seconds 02:14:32 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroPy/build.xml integration -Dtestreports.dir=target/reports/integration 02:14:32 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 02:14:32 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/build.xml 02:14:33 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 02:14:33 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 02:14:33 02:14:33 python-integration: 02:14:33 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/integration 02:14:34 ============================= test session starts ============================== 02:14:34 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3 02:14:34 cachedir: .pytest_cache 02:14:34 django: version: 4.2.16, settings: omeroweb.settings (from ini) 02:14:34 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools 02:14:34 configfile: pytest.ini 02:14:34 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0 02:14:38 collecting ... collected 2061 items / 36 deselected / 2025 selected 02:14:46 test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade0 FAILED [ 0%] 02:14:52 test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade1 FAILED [ 0%] 02:14:53 test/integration/clitest/test_admin.py::TestAdmin::test_log PASSED [ 0%] 02:14:56 test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_log PASSED [ 0%] 02:15:02 test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade0 FAILED [ 0%] 02:15:08 test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade1 FAILED [ 0%] 02:15:11 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Image] PASSED [ 0%] 02:15:11 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Dataset] PASSED [ 0%] 02:15:11 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Project] PASSED [ 0%] 02:15:11 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Plate] PASSED [ 0%] 02:15:11 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rw-----Screen] PASSED [ 0%] 02:15:11 test/integration/clitest/test_chgrp.py::TestChgrp::testChgrpMyData[-rwr----Image] PASSED [ 0%] 02:15:11 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test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[True-1] PASSED [ 5%] 02:15:40 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[True-2] PASSED [ 5%] 02:15:41 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[True-3] PASSED [ 5%] 02:15:41 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[False-1] PASSED [ 5%] 02:15:41 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[False-2] PASSED [ 5%] 02:15:41 test/integration/clitest/test_chgrp.py::TestChgrp::testMultipleSkipheadsPlusObjectsInterlaced[False-3] PASSED [ 5%] 02:15:44 test/integration/clitest/test_chgrp.py::TestChgrpRoot::testNonMember PASSED [ 6%] 02:15:47 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Image] PASSED [ 6%] 02:15:49 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Dataset] PASSED [ 6%] 02:15:51 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Project] PASSED [ 6%] 02:15:53 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Plate] PASSED [ 6%] 02:15:55 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[-Screen] PASSED [ 6%] 02:15:56 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Image] PASSED [ 6%] 02:15:58 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Dataset] PASSED [ 6%] 02:16:00 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Project] PASSED [ 6%] 02:16:02 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Plate] PASSED [ 6%] 02:16:03 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[User:-Screen] PASSED [ 6%] 02:16:05 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Image] PASSED [ 6%] 02:16:07 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Dataset] PASSED [ 6%] 02:16:09 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Project] PASSED [ 6%] 02:16:11 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Plate] PASSED [ 6%] 02:16:12 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithId[Experimenter:-Screen] PASSED [ 6%] 02:16:16 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageTargetUser PASSED [ 6%] 02:16:18 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[-] PASSED [ 6%] 02:16:20 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[-/] PASSED [ 6%] 02:16:22 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[I-] PASSED [ 6%] 02:16:24 test/integration/clitest/test_chown.py::TestChown::testChownBasicUsageWithName[I-/] PASSED [ 7%] 02:16:26 test/integration/clitest/test_chown.py::TestChown::testChownDifferentGroup PASSED [ 7%] 02:16:31 test/integration/clitest/test_chown.py::TestChown::testFileset[image-1] PASSED [ 7%] 02:16:37 test/integration/clitest/test_chown.py::TestChown::testFileset[image-2] PASSED [ 7%] 02:16:43 test/integration/clitest/test_chown.py::TestChown::testFileset[fileset-1] PASSED [ 7%] 02:16:48 test/integration/clitest/test_chown.py::TestChown::testFileset[fileset-2] PASSED [ 7%] 02:16:54 test/integration/clitest/test_chown.py::TestChown::testFilesetPartialFailing PASSED [ 7%] 02:17:00 test/integration/clitest/test_chown.py::TestChown::testFilesetAllImagesChownDataset PASSED [ 7%] 02:17:02 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[True-1] PASSED [ 7%] 02:17:03 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[True-2] PASSED [ 7%] 02:17:05 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[True-3] PASSED [ 7%] 02:17:07 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[False-1] PASSED [ 7%] 02:17:09 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[False-2] PASSED [ 7%] 02:17:11 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsSameClass[False-3] PASSED [ 7%] 02:17:13 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[True-1] PASSED [ 7%] 02:17:15 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[True-2] PASSED [ 7%] 02:17:18 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[True-3] PASSED [ 7%] 02:17:19 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[False-1] PASSED [ 7%] 02:17:21 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[False-2] PASSED [ 7%] 02:17:23 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesSeparated[False-3] PASSED [ 7%] 02:17:25 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[True-1] PASSED [ 8%] 02:17:27 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[True-2] PASSED [ 8%] 02:17:30 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[True-3] PASSED [ 8%] 02:17:32 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[False-1] PASSED [ 8%] 02:17:34 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[False-2] PASSED [ 8%] 02:17:36 test/integration/clitest/test_chown.py::TestChown::testMultipleSimpleObjectsTwoClassesInterlaced[False-3] PASSED [ 8%] 02:17:38 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-1-/Dataset] PASSED [ 8%] 02:17:40 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-1-] PASSED [ 8%] 02:17:42 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-2-/Dataset] PASSED [ 8%] 02:17:45 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[True-2-] PASSED [ 8%] 02:17:47 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-1-/Dataset] PASSED [ 8%] 02:17:49 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-1-] PASSED [ 8%] 02:17:51 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-2-/Dataset] PASSED [ 8%] 02:17:53 test/integration/clitest/test_chown.py::TestChown::testBasicSkipheadBothForms[False-2-] PASSED [ 8%] 02:17:56 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[True-1] PASSED [ 8%] 02:17:58 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[True-2] PASSED [ 8%] 02:18:01 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[True-3] PASSED [ 8%] 02:18:03 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[False-1] PASSED [ 8%] 02:18:06 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[False-2] PASSED [ 8%] 02:18:09 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsSeparated[False-3] PASSED [ 8%] 02:18:11 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[True-1] PASSED [ 8%] 02:18:14 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[True-2] PASSED [ 9%] 02:18:16 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[True-3] PASSED [ 9%] 02:18:19 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[False-1] PASSED [ 9%] 02:18:21 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[False-2] PASSED [ 9%] 02:18:24 test/integration/clitest/test_chown.py::TestChown::testMultipleSkipheadsPlusObjectsInterlaced[False-3] PASSED [ 9%] 02:18:26 test/integration/clitest/test_chown.py::TestChown::testDryRun PASSED [ 9%] 02:18:28 test/integration/clitest/test_chown.py::TestChown::testExcludeNone PASSED [ 9%] 02:18:30 test/integration/clitest/test_chown.py::TestChown::testExcludeDataset PASSED [ 9%] 02:18:32 test/integration/clitest/test_chown.py::TestChown::testExcludeImage PASSED [ 9%] 02:18:34 test/integration/clitest/test_chown.py::TestChown::testExcludeOverridesInclude PASSED [ 9%] 02:18:36 test/integration/clitest/test_chown.py::TestChown::testSeparateAnnotationTransfer PASSED [ 9%] 02:18:39 test/integration/clitest/test_chown.py::TestChown::testOutputWithElision PASSED [ 9%] 02:18:43 test/integration/clitest/test_chown.py::TestTagChown::testChownOneTagSetWithUniqueTags PASSED [ 9%] 02:18:47 test/integration/clitest/test_chown.py::TestChownRoot::testChownBasicUsageWithId PASSED [ 9%] 02:18:51 test/integration/clitest/test_chown.py::TestChownNonGroupOwner::testChownBasicUsageWithId PASSED [ 9%] 02:18:53 test/integration/clitest/test_cleanse.py::TestCleanse::testCleanseAdminOnly PASSED [ 9%] 02:19:06 test/integration/clitest/test_cleanse.py::TestCleanseFullAdmin::testCleanseBasic PASSED [ 9%] 02:19:31 test/integration/clitest/test_cleanse.py::TestCleanseFullAdmin::testCleanseNonsenseName PASSED [ 9%] 02:19:33 test/integration/clitest/test_cleanse.py::TestCleanseRestrictedAdmin::test_cleanse_restricted_admin PASSED [ 9%] 02:19:35 test/integration/clitest/test_cleanse.py::TestFixPyramids::test_fixpyramids_admin_only PASSED [ 9%] 02:19:37 test/integration/clitest/test_cleanse.py::TestFixPyramidsRestrictedAdmin::test_fixpyramids_restricted_admin PASSED [ 10%] 02:19:38 test/integration/clitest/test_db.py::TestDatabase::testBadVersionDies PASSED [ 10%] 02:19:38 test/integration/clitest/test_db.py::TestDatabase::testPasswordIsAskedForAgainIfDiffer PASSED [ 10%] 02:19:39 test/integration/clitest/test_db.py::TestDatabase::testPasswordIsAskedForAgainIfEmpty PASSED [ 10%] 02:19:39 test/integration/clitest/test_db.py::TestDatabase::testPassword[--] PASSED [ 10%] 02:19:40 test/integration/clitest/test_db.py::TestDatabase::testPassword[----no-salt] PASSED [ 10%] 02:19:40 test/integration/clitest/test_db.py::TestDatabase::testPassword[-0-] PASSED [ 10%] 02:19:41 test/integration/clitest/test_db.py::TestDatabase::testPassword[-0---no-salt] PASSED [ 10%] 02:19:41 test/integration/clitest/test_db.py::TestDatabase::testPassword[-1-] PASSED [ 10%] 02:19:41 test/integration/clitest/test_db.py::TestDatabase::testPassword[-1---no-salt] PASSED [ 10%] 02:19:42 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome--] PASSED [ 10%] 02:19:42 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome----no-salt] PASSED [ 10%] 02:19:43 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-0-] PASSED [ 10%] 02:19:43 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-0---no-salt] PASSED [ 10%] 02:19:44 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-1-] PASSED [ 10%] 02:19:44 test/integration/clitest/test_db.py::TestDatabase::testPassword[ome-1---no-salt] PASSED [ 10%] 02:19:45 test/integration/clitest/test_db.py::TestDatabase::testScript[--] PASSED [ 10%] 02:19:46 test/integration/clitest/test_db.py::TestDatabase::testScript[---f] PASSED [ 10%] 02:19:47 test/integration/clitest/test_db.py::TestDatabase::testScript[----file] PASSED [ 10%] 02:19:49 test/integration/clitest/test_db.py::TestDatabase::testScript[---no-salt-] PASSED [ 10%] 02:19:50 test/integration/clitest/test_db.py::TestDatabase::testScript[---no-salt--f] PASSED [ 11%] 02:19:51 test/integration/clitest/test_db.py::TestDatabase::testScript[---no-salt---file] PASSED [ 11%] 02:19:52 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome--] PASSED [ 11%] 02:19:53 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---f] PASSED [ 11%] 02:19:54 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome----file] PASSED [ 11%] 02:19:55 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---no-salt-] PASSED [ 11%] 02:19:56 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---no-salt--f] PASSED [ 11%] 02:19:58 test/integration/clitest/test_db.py::TestDatabase::testScript[--password ome---no-salt---file] PASSED [ 11%] 02:19:58 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s--] PASSED [ 11%] 02:19:58 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---f] PASSED [ 11%] 02:19:59 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s----file] PASSED [ 11%] 02:19:59 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---no-salt-] PASSED [ 11%] 02:20:00 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---no-salt--f] PASSED [ 11%] 02:20:00 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[%s %s %s---no-salt---file] PASSED [ 11%] 02:20:01 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s--] PASSED [ 11%] 02:20:01 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---f] PASSED [ 11%] 02:20:02 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s----file] PASSED [ 11%] 02:20:02 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---no-salt-] PASSED [ 11%] 02:20:02 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---no-salt--f] PASSED [ 11%] 02:20:03 test/integration/clitest/test_db.py::TestDatabase::testScriptDeveloperArgs[--version %s --patch %s --password %s---no-salt---file] PASSED [ 11%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Image-] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Image-I] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Dataset-] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Dataset-I] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Project-] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Project-I] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Plate-] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Plate-I] PASSED [ 12%] 02:20:05 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Screen-] PASSED [ 12%] 02:20:06 test/integration/clitest/test_delete.py::TestDelete::testDeleteMyData[Screen-I] PASSED [ 12%] 02:20:10 test/integration/clitest/test_delete.py::TestDelete::testFileset[image-1] PASSED [ 12%] 02:20:14 test/integration/clitest/test_delete.py::TestDelete::testFileset[image-2] PASSED [ 12%] 02:20:17 test/integration/clitest/test_delete.py::TestDelete::testFileset[fileset-1] PASSED [ 12%] 02:20:21 test/integration/clitest/test_delete.py::TestDelete::testFileset[fileset-2] PASSED [ 12%] 02:20:24 test/integration/clitest/test_delete.py::TestDelete::testFilesetPartialFailing PASSED [ 12%] 02:20:28 test/integration/clitest/test_delete.py::TestDelete::testFilesetAllImagesDeleteDataset PASSED [ 12%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[True-1] PASSED [ 12%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[True-2] PASSED [ 12%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[True-3] PASSED [ 12%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[False-1] PASSED [ 12%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[False-2] PASSED [ 12%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsSameClass[False-3] PASSED [ 13%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[True-1] PASSED [ 13%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[True-2] PASSED [ 13%] 02:20:29 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[True-3] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[False-1] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[False-2] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesSeparated[False-3] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[True-1] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[True-2] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[True-3] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[False-1] PASSED [ 13%] 02:20:30 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[False-2] PASSED [ 13%] 02:20:31 test/integration/clitest/test_delete.py::TestDelete::testMultipleSimpleObjectsTwoClassesInterlaced[False-3] PASSED [ 13%] 02:20:31 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-1-/Dataset] PASSED [ 13%] 02:20:31 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-1-] PASSED [ 13%] 02:20:31 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-2-/Dataset] PASSED [ 13%] 02:20:31 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[True-2-] PASSED [ 13%] 02:20:31 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-1-/Dataset] PASSED [ 13%] 02:20:32 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-1-] PASSED [ 13%] 02:20:32 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-2-/Dataset] PASSED [ 13%] 02:20:32 test/integration/clitest/test_delete.py::TestDelete::testBasicSkipheadBothForms[False-2-] PASSED [ 14%] 02:20:32 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[True-1] PASSED [ 14%] 02:20:32 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[True-2] PASSED [ 14%] 02:20:32 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[True-3] PASSED [ 14%] 02:20:33 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[False-1] PASSED [ 14%] 02:20:33 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[False-2] PASSED [ 14%] 02:20:33 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsSameClass[False-3] PASSED [ 14%] 02:20:34 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[True-1] PASSED [ 14%] 02:20:34 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[True-2] PASSED [ 14%] 02:20:34 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[True-3] PASSED [ 14%] 02:20:34 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[False-1] PASSED [ 14%] 02:20:35 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[False-2] PASSED [ 14%] 02:20:35 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsSeparated[False-3] PASSED [ 14%] 02:20:35 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[True-1] PASSED [ 14%] 02:20:36 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[True-2] PASSED [ 14%] 02:20:36 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[True-3] PASSED [ 14%] 02:20:36 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[False-1] PASSED [ 14%] 02:20:36 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[False-2] PASSED [ 14%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testMultipleSkipheadsPlusObjectsInterlaced[False-3] PASSED [ 14%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testDryRun PASSED [ 14%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testExcludeNone PASSED [ 15%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testExcludeDataset PASSED [ 15%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testExcludeImage PASSED [ 15%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testExcludeOverridesInclude PASSED [ 15%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testDefaultExclusion PASSED [ 15%] 02:20:37 test/integration/clitest/test_delete.py::TestDelete::testDefaultExclusionOverride PASSED [ 15%] 02:20:38 test/integration/clitest/test_delete.py::TestDelete::testDefaultExclusionPartialOverride PASSED [ 15%] 02:20:38 test/integration/clitest/test_delete.py::TestDelete::testSeparateAnnotationDelete PASSED [ 15%] 02:20:38 test/integration/clitest/test_delete.py::TestDelete::testLinkedAnnotationDelete PASSED [ 15%] 02:20:38 test/integration/clitest/test_delete.py::TestDelete::testLinkedAnnotationDeleteWithOverride PASSED [ 15%] 02:20:38 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[1] PASSED [ 15%] 02:20:39 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[2] PASSED [ 15%] 02:20:39 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[3] PASSED [ 15%] 02:20:39 test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionForce PASSED [ 15%] 02:20:41 test/integration/clitest/test_delete.py::TestDelete::testElisionDefaultFailForce PASSED [ 15%] 02:21:09 test/integration/clitest/test_delete.py::TestDelete::testOutputWithElision PASSED [ 15%] 02:21:11 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteOneTagSetNotTags PASSED [ 15%] 02:21:11 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteTwoTagSetsNotTags PASSED [ 15%] 02:21:11 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteOneTagSetIncludingTags PASSED [ 15%] 02:21:12 test/integration/clitest/test_delete.py::TestTagDelete::testDeleteTwoTagSetsIncludingTags PASSED [ 15%] 02:21:14 test/integration/clitest/test_download.py::TestDownload::testNonExistingOriginalFile[] PASSED [ 16%] 02:21:14 test/integration/clitest/test_download.py::TestDownload::testNonExistingOriginalFile[OriginalFile:] PASSED [ 16%] 02:21:14 test/integration/clitest/test_download.py::TestDownload::testOriginalFileTmpfile[] PASSED [ 16%] 02:21:14 test/integration/clitest/test_download.py::TestDownload::testOriginalFileTmpfile[OriginalFile:] PASSED [ 16%] 02:21:14 test/integration/clitest/test_download.py::TestDownload::testOriginalFileStdout[] PASSED [ 16%] 02:21:14 test/integration/clitest/test_download.py::TestDownload::testOriginalFileStdout[OriginalFile:] PASSED [ 16%] 02:21:16 test/integration/clitest/test_download.py::TestDownload::testOriginalFileMultipleGroups[] PASSED [ 16%] 02:21:19 test/integration/clitest/test_download.py::TestDownload::testOriginalFileMultipleGroups[OriginalFile:] PASSED [ 16%] 02:21:19 test/integration/clitest/test_download.py::TestDownload::testNonExistingFileAnnotation PASSED [ 16%] 02:21:19 test/integration/clitest/test_download.py::TestDownload::testFileAnnotationTmpfile PASSED [ 16%] 02:21:19 test/integration/clitest/test_download.py::TestDownload::testFileAnnotationStdout PASSED [ 16%] 02:21:21 test/integration/clitest/test_download.py::TestDownload::testFileAnnotationMultipleGroups PASSED [ 16%] 02:21:25 test/integration/clitest/test_download.py::TestDownload::testNonExistingImage PASSED [ 16%] 02:21:29 test/integration/clitest/test_download.py::TestDownload::testImageFileset[True] PASSED [ 16%] 02:21:32 test/integration/clitest/test_download.py::TestDownload::testImageFileset[False] PASSED [ 16%] 02:21:36 test/integration/clitest/test_download.py::TestDownload::testSingleImageWithCompanion PASSED [ 16%] 02:21:40 test/integration/clitest/test_download.py::TestDownload::testMIF PASSED [ 16%] 02:21:40 test/integration/clitest/test_download.py::TestDownload::testImageNoFileset PASSED [ 16%] 02:21:46 test/integration/clitest/test_download.py::TestDownload::testImageMultipleGroups PASSED [ 16%] 02:21:46 test/integration/clitest/test_download.py::TestDownload::testValidPolicy PASSED [ 16%] 02:22:01 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[+read,+write,+image] PASSED [ 16%] 02:22:01 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[-read,-write,-image,-plate] SKIPPED [ 17%] 02:22:01 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[-read,+write,+image,-plate] SKIPPED [ 17%] 02:22:01 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[+read,+write,+image,-plate] SKIPPED [ 17%] 02:22:01 test/integration/clitest/test_download.py::TestDownload::testPolicyGlobalRestriction[+read,+write,+image,+plate] SKIPPED [ 17%] 02:22:15 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[+read,+write,+image] PASSED [ 17%] 02:22:29 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[-read,-write,-image,-plate] PASSED [ 17%] 02:22:44 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[-read,+write,+image,-plate] PASSED [ 17%] 02:22:58 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[+read,+write,+image,-plate] PASSED [ 17%] 02:23:12 test/integration/clitest/test_download.py::TestDownload::testPolicyGroupRestriction[+read,+write,+image,+plate] PASSED [ 17%] 02:23:14 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Image-] PASSED [ 17%] 02:23:14 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Image-I] PASSED [ 17%] 02:23:14 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Dataset-] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Dataset-I] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Project-] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Project-I] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Plate-] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Plate-I] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Screen-] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObject[Screen-I] PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObjectDryRun PASSED [ 17%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObjectReport PASSED [ 18%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testDuplicateSingleObjectDryRunReport PASSED [ 18%] 02:23:15 test/integration/clitest/test_duplicate.py::TestDuplicate::testBasicHierarchyDuplication PASSED [ 18%] 02:23:16 test/integration/clitest/test_duplicate.py::TestDuplicate::testIgnoreLinks PASSED [ 18%] 02:23:16 test/integration/clitest/test_duplicate.py::TestDuplicate::testIgnoreLinksOverridden PASSED [ 18%] 02:23:16 test/integration/clitest/test_duplicate.py::TestDuplicate::testReferencing PASSED [ 18%] 02:23:16 test/integration/clitest/test_duplicate.py::TestDuplicate::testSkipheadDuplication PASSED [ 18%] 02:23:18 test/integration/clitest/test_fs.py::TestFS::testRepos PASSED [ 18%] 02:23:40 test/integration/clitest/test_fs.py::TestFS::testSetsWithTransfer PASSED [ 18%] 02:23:40 test/integration/clitest/test_fs.py::TestFS::testSetsAdminOnly PASSED [ 18%] 02:23:41 test/integration/clitest/test_fs.py::TestFS::testMkdirAdminOnly PASSED [ 18%] 02:23:45 test/integration/clitest/test_fs.py::TestFS::testImportTime[all-True] PASSED [ 18%] 02:23:49 test/integration/clitest/test_fs.py::TestFS::testImportTime[all-False] PASSED [ 18%] 02:24:05 test/integration/clitest/test_fs.py::TestFS::testImportTime[minmax-True] PASSED [ 18%] 02:24:18 test/integration/clitest/test_fs.py::TestFS::testImportTime[minmax-False] PASSED [ 18%] 02:24:33 test/integration/clitest/test_fs.py::TestFS::testImportTime[thumbnails-True] PASSED [ 18%] 02:24:46 test/integration/clitest/test_fs.py::TestFS::testImportTime[thumbnails-False] PASSED [ 18%] 02:24:48 test/integration/clitest/test_fs.py::TestFsRoot::testMkdirAsAdminSimpleDirCreation PASSED [ 18%] 02:24:48 test/integration/clitest/test_fs.py::TestFsRoot::testMkdirAsAdminHierarchyOnlyPreexisting PASSED [ 18%] 02:24:49 test/integration/clitest/test_fs.py::TestFsRoot::testMkdirAsAdminHierarchyParents PASSED [ 18%] 02:24:58 test/integration/clitest/test_group.py::TestGroup::testList[None-None] PASSED [ 19%] 02:25:01 test/integration/clitest/test_group.py::TestGroup::testList[None-id] PASSED [ 19%] 02:25:05 test/integration/clitest/test_group.py::TestGroup::testList[None-name] PASSED [ 19%] 02:25:08 test/integration/clitest/test_group.py::TestGroup::testList[count-None] PASSED [ 19%] 02:25:11 test/integration/clitest/test_group.py::TestGroup::testList[count-id] PASSED [ 19%] 02:25:15 test/integration/clitest/test_group.py::TestGroup::testList[count-name] PASSED [ 19%] 02:25:19 test/integration/clitest/test_group.py::TestGroup::testList[long-None] PASSED [ 19%] 02:25:22 test/integration/clitest/test_group.py::TestGroup::testList[long-id] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testList[long-name] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testAddAdminOnly PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testInfoNoArgument PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[id] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[name] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[--group-id] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testInfoArgument[--group-name] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testInfoInvalidGroup PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testListUsersNoArgument PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[id] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[name] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[--group-id] PASSED [ 19%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testListUsersArgument[--group-name] PASSED [ 20%] 02:25:26 test/integration/clitest/test_group.py::TestGroup::testListUsersInvalidArgument PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddDefaults PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rw----] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rwr---] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rwra--] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--perms-rwrw--] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-private] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-read-only] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-read-annotate] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddPerms[--type-read-write] PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddSameNamefails PASSED [ 20%] 02:25:29 test/integration/clitest/test_group.py::TestGroupRoot::testAddIgnoreExisting PASSED [ 20%] 02:25:30 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rw-------id] PASSED [ 20%] 02:25:30 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rw-------name] PASSED [ 20%] 02:25:31 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwr------id] PASSED [ 20%] 02:25:32 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwr------name] PASSED [ 20%] 02:25:33 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwra-----id] PASSED [ 20%] 02:25:34 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwra-----name] PASSED [ 20%] 02:25:35 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwrw-----id] PASSED [ 20%] 02:25:36 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rw-----rwrw-----name] PASSED [ 20%] 02:25:36 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rw-------id] PASSED [ 21%] 02:25:36 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rw-------name] PASSED [ 21%] 02:25:36 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwr------id] PASSED [ 21%] 02:25:36 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwr------name] PASSED [ 21%] 02:25:37 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwra-----id] PASSED [ 21%] 02:25:37 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwra-----name] PASSED [ 21%] 02:25:37 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwrw-----id] PASSED [ 21%] 02:25:37 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwr----rwrw-----name] PASSED [ 21%] 02:25:37 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rw-------id] PASSED [ 21%] 02:25:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rw-------name] PASSED [ 21%] 02:25:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwr------id] PASSED [ 21%] 02:25:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwr------name] PASSED [ 21%] 02:25:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwra-----id] PASSED [ 21%] 02:25:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwra-----name] PASSED [ 21%] 02:25:38 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwrw-----id] PASSED [ 21%] 02:25:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwra---rwrw-----name] PASSED [ 21%] 02:25:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rw-------id] PASSED [ 21%] 02:25:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rw-------name] PASSED [ 21%] 02:25:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwr------id] PASSED [ 21%] 02:25:39 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwr------name] PASSED [ 21%] 02:25:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwra-----id] PASSED [ 22%] 02:25:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwra-----name] PASSED [ 22%] 02:25:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwrw-----id] PASSED [ 22%] 02:25:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--perms-rwrw---rwrw-----name] PASSED [ 22%] 02:25:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rw-------id] PASSED [ 22%] 02:25:40 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rw-------name] PASSED [ 22%] 02:25:41 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwr------id] PASSED [ 22%] 02:25:42 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwr------name] PASSED [ 22%] 02:25:43 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwra-----id] PASSED [ 22%] 02:25:44 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwra-----name] PASSED [ 22%] 02:25:45 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwrw-----id] PASSED [ 22%] 02:25:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-private-rwrw-----name] PASSED [ 22%] 02:25:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rw-------id] PASSED [ 22%] 02:25:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rw-------name] PASSED [ 22%] 02:25:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwr------id] PASSED [ 22%] 02:25:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwr------name] PASSED [ 22%] 02:25:46 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwra-----id] PASSED [ 22%] 02:25:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwra-----name] PASSED [ 22%] 02:25:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwrw-----id] PASSED [ 22%] 02:25:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-only-rwrw-----name] PASSED [ 22%] 02:25:47 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rw-------id] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rw-------name] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwr------id] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwr------name] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwra-----id] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwra-----name] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwrw-----id] PASSED [ 23%] 02:25:48 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-annotate-rwrw-----name] PASSED [ 23%] 02:25:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rw-------id] PASSED [ 23%] 02:25:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rw-------name] PASSED [ 23%] 02:25:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwr------id] PASSED [ 23%] 02:25:49 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwr------name] PASSED [ 23%] 02:25:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwra-----id] PASSED [ 23%] 02:25:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwra-----name] PASSED [ 23%] 02:25:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwrw-----id] PASSED [ 23%] 02:25:50 test/integration/clitest/test_group.py::TestGroupRoot::testPerms[--type-read-write-rwrw-----name] PASSED [ 23%] 02:25:52 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-id---id] PASSED [ 23%] 02:25:53 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-id---name] PASSED [ 23%] 02:25:55 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-omeName---id] PASSED [ 23%] 02:25:57 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None-omeName---name] PASSED [ 23%] 02:25:59 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-id---id] PASSED [ 24%] 02:26:01 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-id---name] PASSED [ 24%] 02:26:03 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-name---id] PASSED [ 24%] 02:26:05 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[None---user-name---name] PASSED [ 24%] 02:26:07 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-id---id] PASSED [ 24%] 02:26:09 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-id---name] PASSED [ 24%] 02:26:11 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-omeName---id] PASSED [ 24%] 02:26:13 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner-omeName---name] PASSED [ 24%] 02:26:15 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-id---id] PASSED [ 24%] 02:26:17 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-id---name] PASSED [ 24%] 02:26:19 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-name---id] PASSED [ 24%] 02:26:20 test/integration/clitest/test_group.py::TestGroupRoot::testAddUser[--as-owner---user-name---name] PASSED [ 24%] 02:26:22 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-id---id] PASSED [ 24%] 02:26:24 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-id---name] PASSED [ 24%] 02:26:26 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-omeName---id] PASSED [ 24%] 02:26:28 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True-omeName---name] PASSED [ 24%] 02:26:30 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-id---id] PASSED [ 24%] 02:26:32 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-id---name] PASSED [ 24%] 02:26:34 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-name---id] PASSED [ 24%] 02:26:36 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-True---user-name---name] PASSED [ 24%] 02:26:38 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-id---id] PASSED [ 24%] 02:26:40 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-id---name] PASSED [ 25%] 02:26:42 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-omeName---id] PASSED [ 25%] 02:26:44 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False-omeName---name] PASSED [ 25%] 02:26:46 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-id---id] PASSED [ 25%] 02:26:48 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-id---name] PASSED [ 25%] 02:26:50 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-name---id] PASSED [ 25%] 02:26:52 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[None-False---user-name---name] PASSED [ 25%] 02:26:54 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-id---id] PASSED [ 25%] 02:26:56 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-id---name] PASSED [ 25%] 02:26:58 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-omeName---id] PASSED [ 25%] 02:27:00 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True-omeName---name] PASSED [ 25%] 02:27:02 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-id---id] PASSED [ 25%] 02:27:04 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-id---name] PASSED [ 25%] 02:27:06 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-name---id] PASSED [ 25%] 02:27:08 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-True---user-name---name] PASSED [ 25%] 02:27:10 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-id---id] PASSED [ 25%] 02:27:12 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-id---name] PASSED [ 25%] 02:27:14 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-omeName---id] PASSED [ 25%] 02:27:16 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False-omeName---name] PASSED [ 25%] 02:27:17 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-id---id] PASSED [ 25%] 02:27:19 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-id---name] PASSED [ 26%] 02:27:21 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-name---id] PASSED [ 26%] 02:27:23 test/integration/clitest/test_group.py::TestGroupRoot::testRemoveUser[--as-owner-False---user-name---name] PASSED [ 26%] 02:27:31 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-id-id] PASSED [ 26%] 02:27:39 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-id-name] PASSED [ 26%] 02:27:47 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-name-id] PASSED [ 26%] 02:27:55 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[None-name-name] PASSED [ 26%] 02:28:03 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-id-id] PASSED [ 26%] 02:28:11 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-id-name] PASSED [ 26%] 02:28:19 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-name-id] PASSED [ 26%] 02:28:27 test/integration/clitest/test_group.py::TestGroupRoot::testCopyUsers[--as-owner-name-name] PASSED [ 26%] 02:28:42 test/integration/clitest/test_import.py::TestImport::testAutoClose PASSED [ 26%] 02:28:54 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Adler-32-legacy] PASSED [ 26%] 02:29:07 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Adler-32-underscore] PASSED [ 26%] 02:29:19 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[CRC-32-underscore] PASSED [ 26%] 02:29:32 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[File-Size-64-underscore] PASSED [ 26%] 02:29:44 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[MD5-128-underscore] PASSED [ 26%] 02:29:57 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Murmur3-32-underscore] PASSED [ 26%] 02:30:10 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[Murmur3-128-underscore] PASSED [ 26%] 02:30:22 test/integration/clitest/test_import.py::TestImport::testChecksumAlgorithm[SHA1-160-underscore] PASSED [ 26%] 02:30:35 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Official-True] PASSED [ 27%] 02:30:47 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Official-False] PASSED [ 27%] 02:31:00 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Deprecated-True] PASSED [ 27%] 02:31:13 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Python-1-Deprecated-False] PASSED [ 27%] 02:31:25 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Official-True] PASSED [ 27%] 02:31:38 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Official-False] PASSED [ 27%] 02:31:50 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Deprecated-True] PASSED [ 27%] 02:32:03 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-1-Deprecated-False] PASSED [ 27%] 02:32:16 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Official-True] PASSED [ 27%] 02:32:28 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Official-False] PASSED [ 27%] 02:32:41 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Deprecated-True] PASSED [ 27%] 02:32:53 test/integration/clitest/test_import.py::TestImport::testAnnotationText[Java-2-Deprecated-False] PASSED [ 27%] 02:33:06 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Python-1-Official] PASSED [ 27%] 02:33:18 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Python-1-Deprecated] PASSED [ 27%] 02:33:31 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-1-Official] PASSED [ 27%] 02:33:43 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-1-Deprecated] PASSED [ 27%] 02:33:56 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-2-Official] PASSED [ 27%] 02:34:08 test/integration/clitest/test_import.py::TestImport::testAnnotationText_one_ns[Java-2-Deprecated] PASSED [ 27%] 02:34:21 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Python-1-Official] PASSED [ 27%] 02:34:33 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Python-1-Deprecated] PASSED [ 27%] 02:34:45 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-1-Official] PASSED [ 28%] 02:34:58 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-1-Deprecated] PASSED [ 28%] 02:35:10 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-2-Official] PASSED [ 28%] 02:35:23 test/integration/clitest/test_import.py::TestImport::testAnnotationLink[Java-2-Deprecated] PASSED [ 28%] 02:35:49 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source0-True] PASSED [ 28%] 02:36:14 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source0-False] PASSED [ 28%] 02:36:41 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source1-True] PASSED [ 28%] 02:37:06 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source1-False] PASSED [ 28%] 02:37:32 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source2-True] PASSED [ 28%] 02:37:57 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source2-False] PASSED [ 28%] 02:38:24 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source3-True] PASSED [ 28%] 02:38:49 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source3-False] PASSED [ 28%] 02:39:15 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source4-True] PASSED [ 28%] 02:39:40 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source4-False] PASSED [ 28%] 02:40:07 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source5-True] PASSED [ 28%] 02:40:31 test/integration/clitest/test_import.py::TestImport::testTargetArgument[source5-False] PASSED [ 28%] 02:40:58 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[-True] PASSED [ 28%] 02:41:23 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[-False] PASSED [ 28%] 02:41:49 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[+-True] PASSED [ 28%] 02:42:14 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[+-False] PASSED [ 28%] 02:42:41 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[--True] PASSED [ 28%] 02:43:06 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[--False] PASSED [ 29%] 02:43:32 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[%-True] PASSED [ 29%] 02:43:57 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[%-False] PASSED [ 29%] 02:44:23 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[@-True] PASSED [ 29%] 02:44:48 test/integration/clitest/test_import.py::TestImport::testQualifiedNameModelTargetArgument[@-False] PASSED [ 29%] 02:45:13 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[-True] PASSED [ 29%] 02:45:38 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[-False] PASSED [ 29%] 02:46:04 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[+-True] PASSED [ 29%] 02:46:28 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[+-False] PASSED [ 29%] 02:46:54 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[--True] PASSED [ 29%] 02:47:18 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[--False] PASSED [ 29%] 02:47:44 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[%-True] PASSED [ 29%] 02:48:08 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[%-False] PASSED [ 29%] 02:48:33 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[@-True] PASSED [ 29%] 02:48:58 test/integration/clitest/test_import.py::TestImport::testQualifiedNameTemplateTargetArgument[@-False] PASSED [ 29%] 02:49:10 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[-True] PASSED [ 29%] 02:49:23 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[-False] PASSED [ 29%] 02:49:36 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[+-True] PASSED [ 29%] 02:49:49 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[+-False] PASSED [ 29%] 02:50:02 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[--True] PASSED [ 29%] 02:50:14 test/integration/clitest/test_import.py::TestImport::testMultipleNameModelTargets[--False] PASSED [ 30%] 02:50:26 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameModelTargets[True] PASSED [ 30%] 02:50:39 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameModelTargets[False] PASSED [ 30%] 02:50:52 test/integration/clitest/test_import.py::TestImport::testNestedNameTemplateTargetArgument[True] PASSED [ 30%] 02:51:05 test/integration/clitest/test_import.py::TestImport::testNestedNameTemplateTargetArgument[False] PASSED [ 30%] 02:51:19 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[-True] PASSED [ 30%] 02:51:31 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[-False] PASSED [ 30%] 02:51:44 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[+-True] PASSED [ 30%] 02:51:56 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[+-False] PASSED [ 30%] 02:52:10 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[--True] PASSED [ 30%] 02:52:22 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[--False] PASSED [ 30%] 02:52:35 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[@-True] PASSED [ 30%] 02:52:48 test/integration/clitest/test_import.py::TestImport::testMultipleNameTemplateTargetArgument[@-False] PASSED [ 30%] 02:53:01 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameTemplateTargetArgument[True] PASSED [ 30%] 02:53:13 test/integration/clitest/test_import.py::TestImport::testUniqueMultipleNameTemplateTargetArgument[False] PASSED [ 30%] 02:53:30 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[False-False] PASSED [ 30%] 02:53:46 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[False-True] PASSED [ 30%] 02:54:02 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[True-False] PASSED [ 30%] 02:54:19 test/integration/clitest/test_import.py::TestImport::testImportLinkableTarget[True-True] PASSED [ 30%] 02:54:31 test/integration/clitest/test_import.py::TestImport::testBadTargetArgument[Project] PASSED [ 30%] 02:54:43 test/integration/clitest/test_import.py::TestImport::testBadTargetArgument[Plate] PASSED [ 31%] 02:54:55 test/integration/clitest/test_import.py::TestImport::testBadTargetArgument[Image] PASSED [ 31%] 02:55:07 test/integration/clitest/test_import.py::TestImport::testBadModelTargetDiscriminator[Dataset] PASSED [ 31%] 02:55:19 test/integration/clitest/test_import.py::TestImport::testBadModelTargetDiscriminator[Screen] PASSED [ 31%] 02:55:31 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-ALL] PASSED [ 31%] 02:55:43 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-TRACE] PASSED [ 31%] 02:55:56 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-DEBUG] PASSED [ 31%] 02:56:08 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-INFO] PASSED [ 31%] 02:56:20 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-WARN] PASSED [ 31%] 02:56:33 test/integration/clitest/test_import.py::TestImport::testDebugArgument[None-ERROR] PASSED [ 31%] 02:56:45 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---ALL] PASSED [ 31%] 02:56:58 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---TRACE] PASSED [ 31%] 02:57:10 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---DEBUG] PASSED [ 31%] 02:57:22 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---INFO] PASSED [ 31%] 02:57:34 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---WARN] PASSED [ 31%] 02:57:46 test/integration/clitest/test_import.py::TestImport::testDebugArgument[---ERROR] PASSED [ 31%] 02:57:59 test/integration/clitest/test_import.py::TestImport::testImportOutputDefault PASSED [ 31%] 02:58:11 test/integration/clitest/test_import.py::TestImport::testImportOutputYaml PASSED [ 31%] 02:58:23 test/integration/clitest/test_import.py::TestImport::testImportOutputLegacy PASSED [ 31%] 02:58:36 test/integration/clitest/test_import.py::TestImport::testImportOutputDefaultWithScreen[1] PASSED [ 31%] 02:58:49 test/integration/clitest/test_import.py::TestImport::testImportOutputDefaultWithScreen[2] PASSED [ 32%] 02:59:03 test/integration/clitest/test_import.py::TestImport::testImportOutputDefaultWithScreen[3] PASSED [ 32%] 02:59:17 test/integration/clitest/test_import.py::TestImport::testImportAsRoot PASSED [ 32%] 02:59:32 test/integration/clitest/test_import.py::TestImport::testImportMultiGroup PASSED [ 32%] 02:59:46 test/integration/clitest/test_import.py::TestImport::testImportAsRootMultiGroup PASSED [ 32%] 02:59:58 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image] PASSED [ 32%] 03:00:11 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-x] PASSED [ 32%] 03:00:23 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image--description] PASSED [ 32%] 03:00:35 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-n] PASSED [ 32%] 03:00:48 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-n-x] PASSED [ 32%] 03:01:00 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image-n--description] PASSED [ 32%] 03:01:12 test/integration/clitest/test_import.py::TestImport::testNamingArguments[Image--name] PASSED [ 32%] 03:01:25 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test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-True] PASSED [ 38%] 03:15:12 test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-False] PASSED [ 38%] 03:15:20 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rw----] PASSED [ 38%] 03:15:29 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwr---] PASSED [ 38%] 03:15:37 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwra--] PASSED [ 38%] 03:15:46 test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwrw--] PASSED [ 38%] 03:15:48 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-True] PASSED [ 38%] 03:15:50 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-False] PASSED [ 38%] 03:15:52 test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-True] PASSED [ 38%] 03:15:54 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test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_sudo PASSED [ 39%] 03:16:16 test/integration/clitest/test_sessions.py::TestSessions::test_close PASSED [ 39%] 03:16:18 test/integration/clitest/test_tag.py::TestTag::testCreateTag[None-None] PASSED [ 39%] 03:16:18 test/integration/clitest/test_tag.py::TestTag::testCreateTag[None---name] PASSED [ 39%] 03:16:18 test/integration/clitest/test_tag.py::TestTag::testCreateTag[--description-None] PASSED [ 39%] 03:16:18 test/integration/clitest/test_tag.py::TestTag::testCreateTag[--description---name] PASSED [ 39%] 03:16:18 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[None-None] PASSED [ 39%] 03:16:18 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[None---name] PASSED [ 39%] 03:16:19 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[--desc-None] PASSED [ 39%] 03:16:19 test/integration/clitest/test_tag.py::TestTag::testCreateTagset[--desc---name] PASSED [ 39%] 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test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---admin-member] PASSED [ 41%] 03:17:52 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---owner-admin] PASSED [ 41%] 03:17:57 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---owner-owner] PASSED [ 41%] 03:18:01 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---owner-member] PASSED [ 41%] 03:18:05 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---member-admin] PASSED [ 41%] 03:18:09 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---member-owner] PASSED [ 41%] 03:18:13 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwra---member-member] PASSED [ 41%] 03:18:17 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---admin-admin] PASSED [ 41%] 03:18:22 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---admin-owner] PASSED [ 41%] 03:18:26 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---admin-member] PASSED [ 41%] 03:18:30 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---owner-admin] PASSED [ 41%] 03:18:34 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---owner-owner] PASSED [ 41%] 03:18:38 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---owner-member] PASSED [ 41%] 03:18:42 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---member-admin] PASSED [ 41%] 03:18:47 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---member-owner] PASSED [ 41%] 03:18:51 test/integration/clitest/test_tag.py::TestPermissions::testLink[rwrw---member-member] PASSED [ 42%] 03:18:53 test/integration/clitest/test_tag.py::TestTagList::testList[] PASSED [ 42%] 03:18:53 test/integration/clitest/test_tag.py::TestTagList::testList[--nopage] PASSED [ 42%] 03:18:53 test/integration/clitest/test_tag.py::TestTagList::testListSets[] PASSED [ 42%] 03:18:53 test/integration/clitest/test_tag.py::TestTagList::testListSets[--nopage] PASSED [ 42%] 03:18:55 test/integration/clitest/test_upload.py::TestUpload::testUploadSingleFile PASSED [ 42%] 03:18:56 test/integration/clitest/test_upload.py::TestUpload::testUploadMultipleFiles PASSED [ 42%] 03:18:56 test/integration/clitest/test_upload.py::TestUpload::testUploadBadFile PASSED [ 42%] 03:19:11 test/integration/clitest/test_user.py::TestUser::testList[None-None] PASSED [ 42%] 03:19:21 test/integration/clitest/test_user.py::TestUser::testList[None-id] PASSED [ 42%] 03:19:31 test/integration/clitest/test_user.py::TestUser::testList[None-login] PASSED [ 42%] 03:19:41 test/integration/clitest/test_user.py::TestUser::testList[None-first-name] PASSED [ 42%] 03:19:51 test/integration/clitest/test_user.py::TestUser::testList[None-last-name] PASSED [ 42%] 03:20:00 test/integration/clitest/test_user.py::TestUser::testList[None-email] PASSED [ 42%] 03:20:10 test/integration/clitest/test_user.py::TestUser::testList[count-None] PASSED [ 42%] 03:20:20 test/integration/clitest/test_user.py::TestUser::testList[count-id] PASSED [ 42%] 03:20:30 test/integration/clitest/test_user.py::TestUser::testList[count-login] PASSED [ 42%] 03:20:40 test/integration/clitest/test_user.py::TestUser::testList[count-first-name] PASSED [ 42%] 03:20:49 test/integration/clitest/test_user.py::TestUser::testList[count-last-name] PASSED [ 42%] 03:20:59 test/integration/clitest/test_user.py::TestUser::testList[count-email] PASSED [ 42%] 03:21:09 test/integration/clitest/test_user.py::TestUser::testList[long-None] PASSED [ 43%] 03:21:18 test/integration/clitest/test_user.py::TestUser::testList[long-id] PASSED [ 43%] 03:21:29 test/integration/clitest/test_user.py::TestUser::testList[long-login] PASSED [ 43%] 03:21:38 test/integration/clitest/test_user.py::TestUser::testList[long-first-name] PASSED [ 43%] 03:21:49 test/integration/clitest/test_user.py::TestUser::testList[long-last-name] PASSED [ 43%] 03:21:59 test/integration/clitest/test_user.py::TestUser::testList[long-email] PASSED [ 43%] 03:22:02 test/integration/clitest/test_user.py::TestUser::testListWithStyles[None] PASSED [ 43%] 03:22:06 test/integration/clitest/test_user.py::TestUser::testListWithStyles[sql] PASSED [ 43%] 03:22:09 test/integration/clitest/test_user.py::TestUser::testListWithStyles[csv] PASSED [ 43%] 03:22:13 test/integration/clitest/test_user.py::TestUser::testListWithStyles[plain] PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testListWithStyles[json] PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testInfoNoArgument PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testInfoArgument[id] PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testInfoArgument[omeName] PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testInfoArgument[--user-id] PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testInfoArgument[--user-name] PASSED [ 43%] 03:22:16 test/integration/clitest/test_user.py::TestUser::testInfoInvalidUser PASSED [ 43%] 03:22:19 test/integration/clitest/test_user.py::TestUser::testListGroupsNoArgument PASSED [ 43%] 03:22:22 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[id] PASSED [ 43%] 03:22:25 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[omeName] PASSED [ 43%] 03:22:28 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[--user-id] PASSED [ 44%] 03:22:31 test/integration/clitest/test_user.py::TestUser::testListGroupsArgument[--user-name] PASSED [ 44%] 03:22:31 test/integration/clitest/test_user.py::TestUser::testListGroupsInvalidArgument PASSED [ 44%] 03:22:34 test/integration/clitest/test_user.py::TestUser::testEmail[None] PASSED [ 44%] 03:22:37 test/integration/clitest/test_user.py::TestUser::testEmail[-1] PASSED [ 44%] 03:22:41 test/integration/clitest/test_user.py::TestUser::testEmail[--one] PASSED [ 44%] 03:22:47 test/integration/clitest/test_user.py::TestUser::testPassword[True] PASSED [ 44%] 03:22:47 test/integration/clitest/test_user.py::TestUser::testPassword[False] PASSED [ 44%] 03:22:47 test/integration/clitest/test_user.py::TestUser::testAddAdminOnly PASSED [ 44%] 03:22:54 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-id---id] PASSED [ 44%] 03:22:56 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-id---name] PASSED [ 44%] 03:22:58 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-name---id] PASSED [ 44%] 03:23:00 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None-name---name] PASSED [ 44%] 03:23:02 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-id---id] PASSED [ 44%] 03:23:04 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-id---name] PASSED [ 44%] 03:23:06 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-name---id] PASSED [ 44%] 03:23:08 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[None---group-name---name] PASSED [ 44%] 03:23:10 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-id---id] PASSED [ 44%] 03:23:12 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-id---name] PASSED [ 44%] 03:23:14 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-name---id] PASSED [ 44%] 03:23:16 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner-name---name] PASSED [ 44%] 03:23:18 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-id---id] PASSED [ 45%] 03:23:20 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-id---name] PASSED [ 45%] 03:23:22 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-name---id] PASSED [ 45%] 03:23:24 test/integration/clitest/test_user.py::TestUserRoot::testJoinGroup[--as-owner---group-name---name] PASSED [ 45%] 03:23:26 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-id---id] PASSED [ 45%] 03:23:28 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-id---name] PASSED [ 45%] 03:23:30 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-name---id] PASSED [ 45%] 03:23:32 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True-name---name] PASSED [ 45%] 03:23:34 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-id---id] PASSED [ 45%] 03:23:36 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-id---name] PASSED [ 45%] 03:23:38 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-name---id] PASSED [ 45%] 03:23:40 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-True---group-name---name] PASSED [ 45%] 03:23:42 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-id---id] PASSED [ 45%] 03:23:44 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-id---name] PASSED [ 45%] 03:23:46 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-name---id] PASSED [ 45%] 03:23:48 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False-name---name] PASSED [ 45%] 03:23:50 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-id---id] PASSED [ 45%] 03:23:52 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-id---name] PASSED [ 45%] 03:23:54 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-name---id] PASSED [ 45%] 03:23:56 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[None-False---group-name---name] PASSED [ 45%] 03:23:58 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-id---id] PASSED [ 46%] 03:24:00 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-id---name] PASSED [ 46%] 03:24:02 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-name---id] PASSED [ 46%] 03:24:04 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True-name---name] PASSED [ 46%] 03:24:07 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-id---id] PASSED [ 46%] 03:24:08 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-id---name] PASSED [ 46%] 03:24:10 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-name---id] PASSED [ 46%] 03:24:13 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-True---group-name---name] PASSED [ 46%] 03:24:14 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-id---id] PASSED [ 46%] 03:24:17 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-id---name] PASSED [ 46%] 03:24:19 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-name---id] PASSED [ 46%] 03:24:21 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False-name---name] PASSED [ 46%] 03:24:23 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-id---id] PASSED [ 46%] 03:24:25 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-id---name] PASSED [ 46%] 03:24:27 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-name---id] PASSED [ 46%] 03:24:29 test/integration/clitest/test_user.py::TestUserRoot::testLeaveGroup[--as-owner-False---group-name---name] PASSED [ 46%] 03:24:29 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None-None-None] PASSED [ 46%] 03:24:30 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None-None--m] PASSED [ 46%] 03:24:30 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None-None---middlename] PASSED [ 46%] 03:24:30 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None--e-None] PASSED [ 46%] 03:24:30 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None--e--m] PASSED [ 47%] 03:24:31 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None--e---middlename] PASSED [ 47%] 03:24:31 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None---email-None] PASSED [ 47%] 03:24:31 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None---email--m] PASSED [ 47%] 03:24:31 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None-None---email---middlename] PASSED [ 47%] 03:24:32 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i-None-None] PASSED [ 47%] 03:24:32 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i-None--m] PASSED [ 47%] 03:24:32 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i-None---middlename] PASSED [ 47%] 03:24:32 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i--e-None] PASSED [ 47%] 03:24:33 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i--e--m] PASSED [ 47%] 03:24:33 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i--e---middlename] PASSED [ 47%] 03:24:33 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i---email-None] PASSED [ 47%] 03:24:33 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i---email--m] PASSED [ 47%] 03:24:34 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None--i---email---middlename] PASSED [ 47%] 03:24:34 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution-None-None] PASSED [ 47%] 03:24:34 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution-None--m] PASSED [ 47%] 03:24:34 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution-None---middlename] PASSED [ 47%] 03:24:34 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution--e-None] PASSED [ 47%] 03:24:35 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution--e--m] PASSED [ 47%] 03:24:35 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution--e---middlename] PASSED [ 47%] 03:24:35 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution---email-None] PASSED [ 48%] 03:24:35 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution---email--m] PASSED [ 48%] 03:24:36 test/integration/clitest/test_user.py::TestUserRoot::testAdd[None---institution---email---middlename] PASSED [ 48%] 03:24:36 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None-None-None] PASSED [ 48%] 03:24:37 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None-None--m] PASSED [ 48%] 03:24:38 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None-None---middlename] PASSED [ 48%] 03:24:39 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None--e-None] PASSED [ 48%] 03:24:40 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None--e--m] PASSED [ 48%] 03:24:41 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None--e---middlename] PASSED [ 48%] 03:24:41 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None---email-None] PASSED [ 48%] 03:24:42 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None---email--m] PASSED [ 48%] 03:24:43 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a-None---email---middlename] PASSED [ 48%] 03:24:44 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i-None-None] PASSED [ 48%] 03:24:45 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i-None--m] PASSED [ 48%] 03:24:46 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i-None---middlename] PASSED [ 48%] 03:24:47 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i--e-None] PASSED [ 48%] 03:24:48 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i--e--m] PASSED [ 48%] 03:24:48 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i--e---middlename] PASSED [ 48%] 03:24:49 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i---email-None] PASSED [ 48%] 03:24:50 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i---email--m] PASSED [ 48%] 03:24:51 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a--i---email---middlename] PASSED [ 48%] 03:24:52 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution-None-None] PASSED [ 49%] 03:24:53 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution-None--m] PASSED [ 49%] 03:24:54 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution-None---middlename] PASSED [ 49%] 03:24:55 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution--e-None] PASSED [ 49%] 03:24:56 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution--e--m] PASSED [ 49%] 03:24:56 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution--e---middlename] PASSED [ 49%] 03:24:57 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution---email-None] PASSED [ 49%] 03:24:58 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution---email--m] PASSED [ 49%] 03:24:59 test/integration/clitest/test_user.py::TestUserRoot::testAdd[-a---institution---email---middlename] PASSED [ 49%] 03:25:00 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None-None-None] PASSED [ 49%] 03:25:01 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None-None--m] PASSED [ 49%] 03:25:02 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None-None---middlename] PASSED [ 49%] 03:25:03 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None--e-None] PASSED [ 49%] 03:25:04 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None--e--m] PASSED [ 49%] 03:25:05 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None--e---middlename] PASSED [ 49%] 03:25:06 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None---email-None] PASSED [ 49%] 03:25:07 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None---email--m] PASSED [ 49%] 03:25:08 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin-None---email---middlename] PASSED [ 49%] 03:25:09 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i-None-None] PASSED [ 49%] 03:25:10 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i-None--m] PASSED [ 49%] 03:25:11 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i-None---middlename] PASSED [ 50%] 03:25:12 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i--e-None] PASSED [ 50%] 03:25:13 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i--e--m] PASSED [ 50%] 03:25:14 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i--e---middlename] PASSED [ 50%] 03:25:15 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i---email-None] PASSED [ 50%] 03:25:16 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i---email--m] PASSED [ 50%] 03:25:17 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin--i---email---middlename] PASSED [ 50%] 03:25:18 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution-None-None] PASSED [ 50%] 03:25:20 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution-None--m] PASSED [ 50%] 03:25:21 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution-None---middlename] PASSED [ 50%] 03:25:22 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution--e-None] PASSED [ 50%] 03:25:23 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution--e--m] PASSED [ 50%] 03:25:24 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution--e---middlename] PASSED [ 50%] 03:25:25 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution---email-None] PASSED [ 50%] 03:25:26 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution---email--m] PASSED [ 50%] 03:25:27 test/integration/clitest/test_user.py::TestUserRoot::testAdd[--admin---institution---email---middlename] PASSED [ 50%] 03:25:27 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[id] PASSED [ 50%] 03:25:28 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[name] PASSED [ 50%] 03:25:28 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[--group-id] PASSED [ 50%] 03:25:29 test/integration/clitest/test_user.py::TestUserRoot::testAddGroup[--group-name] PASSED [ 50%] 03:25:30 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[True-None] PASSED [ 51%] 03:25:30 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[True--P] PASSED [ 51%] 03:25:31 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[True---userpassword] PASSED [ 51%] 03:25:31 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[False-None] PASSED [ 51%] 03:25:32 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[False--P] PASSED [ 51%] 03:25:32 test/integration/clitest/test_user.py::TestUserRoot::testAddPassword[False---userpassword] PASSED [ 51%] 03:25:32 test/integration/clitest/test_user.py::TestUserRoot::testAddNoPassword PASSED [ 51%] 03:25:41 test/integration/clitest/test_user.py::TestUserRoot::testPassword[True] PASSED [ 51%] 03:25:43 test/integration/clitest/test_user.py::TestUserRoot::testPassword[False] PASSED [ 51%] 03:25:46 test/integration/fstest/test_rename.py::TestRename::test_dir PASSED [ 51%] 03:25:56 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data0] PASSED [ 51%] 03:26:07 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data1] PASSED [ 51%] 03:26:17 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data2] PASSED [ 51%] 03:26:27 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data3] PASSED [ 51%] 03:26:39 test/integration/fstest/test_rename.py::TestRename::test_rename_permissions[data4] PASSED [ 51%] 03:26:44 test/integration/fstest/test_rename.py::TestRename::test_rename_annotation PASSED [ 51%] 03:26:45 test/integration/fstest/test_rename.py::TestRename::test_prep_and_delete PASSED [ 51%] 03:26:50 test/integration/gatewaytest/test_annotation.py::testSameOwner PASSED [ 51%] 03:26:52 test/integration/gatewaytest/test_annotation.py::testCommentAnnotation PASSED [ 51%] 03:26:53 test/integration/gatewaytest/test_annotation.py::testNonDefGroupAnnotation PASSED [ 51%] 03:26:55 test/integration/gatewaytest/test_annotation.py::testTimestampAnnotation PASSED [ 52%] 03:26:56 test/integration/gatewaytest/test_annotation.py::testBooleanAnnotation PASSED [ 52%] 03:26:57 test/integration/gatewaytest/test_annotation.py::testLongAnnotation PASSED [ 52%] 03:26:58 test/integration/gatewaytest/test_annotation.py::testMapAnnotation PASSED [ 52%] 03:27:00 test/integration/gatewaytest/test_annotation.py::testDualLinkedAnnotation PASSED [ 52%] 03:27:01 test/integration/gatewaytest/test_annotation.py::testListAnnotations PASSED [ 52%] 03:27:03 test/integration/gatewaytest/test_annotation.py::testFileAnnotation PASSED [ 52%] 03:27:04 test/integration/gatewaytest/test_annotation.py::testFileAnnotationNoName PASSED [ 52%] 03:27:07 test/integration/gatewaytest/test_annotation.py::testFileAnnotationSpeed PASSED [ 52%] 03:27:08 test/integration/gatewaytest/test_annotation.py::testFileAnnNonDefaultGroup PASSED [ 52%] 03:27:10 test/integration/gatewaytest/test_annotation.py::testUnlinkAnnotation PASSED [ 52%] 03:27:11 test/integration/gatewaytest/test_annotation.py::testAnnotationCount PASSED [ 52%] 03:27:13 test/integration/gatewaytest/test_chgrp.py::testImageChgrp PASSED [ 52%] 03:27:14 test/integration/gatewaytest/test_chgrp.py::testDatasetChgrp PASSED [ 52%] 03:27:16 test/integration/gatewaytest/test_chgrp.py::testPDIChgrp PASSED [ 52%] 03:27:18 test/integration/gatewaytest/test_chgrp.py::testTwoDatasetsChgrpToProject PASSED [ 52%] 03:27:19 test/integration/gatewaytest/test_chgrp.py::testMultiDatasetDoAll PASSED [ 52%] 03:27:22 test/integration/gatewaytest/test_chmod.py::TestChmodGroup::testChmod PASSED [ 52%] 03:27:32 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testReadOnly PASSED [ 52%] 03:27:34 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testReadAnnotate PASSED [ 52%] 03:27:36 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testGroupMinusOne PASSED [ 52%] 03:27:37 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testReadWrite PASSED [ 53%] 03:27:40 test/integration/gatewaytest/test_chmod.py::TestCustomUsers::testDelete8723 PASSED [ 53%] 03:27:43 test/integration/gatewaytest/test_chmod.py::TestManualCreateEdit::testReadOnly PASSED [ 53%] 03:27:44 test/integration/gatewaytest/test_chmod.py::Test8800::testWithBlitzWrappers PASSED [ 53%] 03:27:45 test/integration/gatewaytest/test_chmod.py::Test8800::testWithoutWrappers PASSED [ 53%] 03:27:49 test/integration/gatewaytest/test_chmod.py::TestDefaultSetup::testAuthorCanEdit PASSED [ 53%] 03:27:56 test/integration/gatewaytest/test_chown.py::TestChown::test_chown_project PASSED [ 53%] 03:28:01 test/integration/gatewaytest/test_chown.py::TestChown::test_chown_pdi PASSED [ 53%] 03:28:03 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[foo] PASSED [ 53%] 03:28:05 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[False] PASSED [ 53%] 03:28:07 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[false] PASSED [ 53%] 03:28:10 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[True] PASSED [ 53%] 03:28:12 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[true] PASSED [ 53%] 03:28:14 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[] PASSED [ 53%] 03:28:17 test/integration/gatewaytest/test_config_service.py::testInterpolateSetting[None] PASSED [ 53%] 03:28:24 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testMultiProcessSession PASSED [ 53%] 03:30:34 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testClose ERROR [ 53%] 03:32:45 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testTopLevelObjects ERROR [ 53%] 03:32:45 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testCloseSession PASSED [ 53%] 03:32:45 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testMiscellaneous PASSED [ 53%] 03:32:45 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectUsingClient PASSED [ 54%] 03:32:46 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectUsingClientNoSessionWithIdentity PASSED [ 54%] 03:32:46 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectUsingClientSessionWithoutIdentity PASSED [ 54%] 03:32:47 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSessionId PASSED [ 54%] 03:32:47 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testConnectWithSessionId PASSED [ 54%] 03:32:48 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithSecureClient PASSED [ 54%] 03:32:48 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUnsecureClient PASSED [ 54%] 03:32:48 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUsername[None] PASSED [ 54%] 03:32:48 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUsername[False] PASSED [ 54%] 03:32:48 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureWithUsername[True] PASSED [ 54%] 03:32:48 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testSecureMisMatch PASSED [ 54%] 03:32:49 test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testHost PASSED [ 54%] 03:32:50 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectsUnwrapped PASSED [ 54%] 03:32:50 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjects PASSED [ 54%] 03:32:50 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectsWait PASSED [ 54%] 03:32:50 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectsDryRun PASSED [ 54%] 03:32:50 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteAnnotatedFileAnnotation PASSED [ 54%] 03:32:51 test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectDirect PASSED [ 54%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testCountArchivedFiles PASSED [ 54%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testCountFilesetFiles PASSED [ 54%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testCountImportedImageFiles PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedFilesInfo PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedFilesInfoWithAnnotations PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFiles PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedImageFiles PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFilesInfo PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfo PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfoWithAnnotations PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfoMultiple PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFilesetFilesInfoMultipleWithAnnotations PASSED [ 55%] 03:32:53 test/integration/gatewaytest/test_fs.py::TestFileset::testGetFileset PASSED [ 55%] 03:32:54 test/integration/gatewaytest/test_fs.py::TestFileset::testGetImportedImageFilePaths PASSED [ 55%] 03:32:55 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testCountArchivedFiles PASSED [ 55%] 03:32:55 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testCountFilesetFiles PASSED [ 55%] 03:32:55 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testCountImportedImageFiles PASSED [ 55%] 03:32:55 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetImportedFilesInfo PASSED [ 55%] 03:32:55 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFiles PASSED [ 55%] 03:32:56 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetImportedImageFiles PASSED [ 55%] 03:32:56 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFilesInfo PASSED [ 55%] 03:32:56 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetFilesetFilesInfo PASSED [ 55%] 03:32:56 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetFilesetFilesInfoMultiple PASSED [ 56%] 03:32:56 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetFileset PASSED [ 56%] 03:32:57 test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetImportedImageFilePaths PASSED [ 56%] 03:32:58 test/integration/gatewaytest/test_get_objects.py::TestDeleteObject::testDeleteAnnotation PASSED [ 56%] 03:32:59 test/integration/gatewaytest/test_get_objects.py::TestDeleteObject::testDeleteImage PASSED [ 56%] 03:33:01 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testIllegalObjTypeInt PASSED [ 56%] 03:33:01 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testObjTypeUnicode PASSED [ 56%] 03:33:01 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testObjTypeString PASSED [ 56%] 03:33:01 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindProject PASSED [ 56%] 03:35:12 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindExperimenter ERROR [ 56%] 03:35:13 test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindAnnotation PASSED [ 56%] 03:35:17 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testSearchObjects PASSED [ 56%] 03:35:17 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListProjects PASSED [ 56%] 03:35:17 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testPagination PASSED [ 56%] 03:35:17 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetDatasetsByProject PASSED [ 56%] 03:35:22 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListExperimentersAndGroups[True] PASSED [ 56%] 03:35:24 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListExperimentersAndGroups[False] PASSED [ 56%] 03:35:24 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListColleagues PASSED [ 56%] 03:35:27 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testFindExperimenterWithGroups PASSED [ 56%] 03:35:31 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetExperimentersByGroup[True] PASSED [ 56%] 03:35:36 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetExperimentersByGroup[False] PASSED [ 56%] 03:35:38 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetExperimenter PASSED [ 57%] 03:37:48 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetAnnotations ERROR [ 57%] 03:39:59 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImage ERROR [ 57%] 03:42:10 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-True] ERROR [ 57%] 03:44:21 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-False] ERROR [ 57%] 03:46:32 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-True] ERROR [ 57%] 03:48:43 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-False] ERROR [ 57%] 03:48:43 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetProject PASSED [ 57%] 03:50:54 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testTraversal ERROR [ 57%] 03:50:55 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False0-True] PASSED [ 57%] 03:50:55 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False0-False] PASSED [ 57%] 03:50:56 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False1-True] PASSED [ 57%] 03:50:56 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testListOrphans[False1-False] PASSED [ 57%] 03:50:56 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testOrderById PASSED [ 57%] 03:50:57 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Image] FAILED [ 57%] 03:50:57 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Dataset] FAILED [ 57%] 03:50:57 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Project] FAILED [ 57%] 03:50:57 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Screen] FAILED [ 57%] 03:50:58 test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Plate] FAILED [ 57%] 03:51:01 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGetGroupsLeaderOfAsLeader PASSED [ 57%] 03:51:01 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGetGroupsLeaderOfAsMember PASSED [ 58%] 03:51:04 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGetGroupsMemberOf PASSED [ 58%] 03:51:04 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwner PASSED [ 58%] 03:51:05 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMember PASSED [ 58%] 03:51:05 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwnerDeprecated PASSED [ 58%] 03:51:07 test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMemberDeprecated PASSED [ 58%] 03:51:09 test/integration/gatewaytest/test_get_objects.py::TestListParents::testSupportedObjects PASSED [ 58%] 03:51:11 test/integration/gatewaytest/test_get_objects.py::TestListParents::testListParentsPDI PASSED [ 58%] 03:51:14 test/integration/gatewaytest/test_get_objects.py::TestListParents::testListParentsSPW PASSED [ 58%] 03:51:16 test/integration/gatewaytest/test_get_objects.py::TestListParents::testExperimenterListParents PASSED [ 58%] 03:51:16 test/integration/gatewaytest/test_helpers.py::TestHelperObjects::testColorHolder PASSED [ 58%] 03:51:16 test/integration/gatewaytest/test_helpers.py::TestHelperObjects::testOmeroType PASSED [ 58%] 03:51:16 test/integration/gatewaytest/test_helpers.py::TestHelperObjects::testSplitHTMLColor PASSED [ 58%] 03:53:26 test/integration/gatewaytest/test_image.py::TestImage::testThumbnail ERROR [ 58%] 03:55:37 test/integration/gatewaytest/test_image.py::TestImage::testThumbnailSet ERROR [ 58%] 03:57:48 test/integration/gatewaytest/test_image.py::TestImage::testRenderingModels ERROR [ 58%] 03:59:59 test/integration/gatewaytest/test_image.py::TestImage::testSplitChannel ERROR [ 58%] 04:02:10 test/integration/gatewaytest/test_image.py::TestImage::testLinePlots ERROR [ 58%] 04:04:21 test/integration/gatewaytest/test_image.py::TestImage::testProjections ERROR [ 58%] 04:06:32 test/integration/gatewaytest/test_image.py::TestImage::testProperties ERROR [ 58%] 04:08:43 test/integration/gatewaytest/test_image.py::TestImage::testPixelSizeUnits ERROR [ 59%] 04:10:55 test/integration/gatewaytest/test_image.py::TestImage::testUnitsGetValue ERROR [ 59%] 04:13:05 test/integration/gatewaytest/test_image.py::TestImage::testChannelWavelengthUnits ERROR [ 59%] 04:15:16 test/integration/gatewaytest/test_image.py::TestImage::testExposureTimeUnits ERROR [ 59%] 04:17:27 test/integration/gatewaytest/test_image.py::TestImage::testShortname ERROR [ 59%] 04:19:39 test/integration/gatewaytest/test_image.py::TestImage::testImageDate ERROR [ 59%] 04:21:50 test/integration/gatewaytest/test_image.py::TestImage::testSimpleMarshal ERROR [ 59%] 04:24:01 test/integration/gatewaytest/test_image.py::TestImage::testExport ERROR [ 59%] 04:26:12 test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion ERROR [ 59%] 04:28:23 test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_resolution ERROR [ 59%] 04:30:34 test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_invalid_resolution ERROR [ 59%] 04:32:45 test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView ERROR [ 59%] 04:34:57 test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView_Size ERROR [ 59%] 04:34:58 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testGetDate PASSED [ 59%] 04:34:58 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testGetDateNoAcquisitionDate PASSED [ 59%] 04:34:58 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testSimpleMarshal PASSED [ 59%] 04:35:01 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testChannelLabel PASSED [ 59%] 04:35:01 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testChannelEmissionWaveLabel PASSED [ 59%] 04:35:02 test/integration/gatewaytest/test_image_wrapper.py::TestImageWrapper::testChannelNoLabel PASSED [ 59%] 04:35:03 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testThrowException PASSED [ 59%] 04:35:03 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testPrepareRenderingEngine PASSED [ 60%] 04:35:03 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testGetChannels PASSED [ 60%] 04:35:03 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testGetChannelsNoRe PASSED [ 60%] 04:35:05 test/integration/gatewaytest/test_missing_pyramid.py::TestPyramid::testGetRdefId PASSED [ 60%] 04:35:10 test/integration/gatewaytest/test_permissions.py::TestPrivileges::test_update_admin_privileges PASSED [ 60%] 04:35:14 test/integration/gatewaytest/test_permissions.py::TestPrivileges::test_full_admin_privileges PASSED [ 60%] 04:37:24 test/integration/gatewaytest/test_pixels.py::TestPixels::testReuseRawPixelsStore ERROR [ 60%] 04:39:35 test/integration/gatewaytest/test_pixels.py::TestPixels::testPlaneInfo ERROR [ 60%] 04:41:46 test/integration/gatewaytest/test_pixels.py::TestPixels::testPixelsType ERROR [ 60%] 04:43:57 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetTile ERROR [ 60%] 04:46:08 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlane ERROR [ 60%] 04:48:19 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnGetPlane ERROR [ 60%] 04:50:30 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnClose ERROR [ 60%] 04:52:42 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnBoth ERROR [ 60%] 04:54:53 test/integration/gatewaytest/test_pixels.py::TestPixels::testGetHistogram ERROR [ 60%] 04:54:56 test/integration/gatewaytest/test_plate_wrapper.py::TestPlateWrapper::testGetGridSize PASSED [ 60%] 04:57:07 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testDefault ERROR [ 60%] 04:59:18 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCustomized ERROR [ 60%] 05:01:29 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testChannelWindows ERROR [ 60%] 05:03:40 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testFloatDefaultMinMax ERROR [ 60%] 05:05:52 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testEmissionWave ERROR [ 60%] 05:08:03 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testBatchCopy ERROR [ 61%] 05:10:14 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGroupBasedPermissions ERROR [ 61%] 05:12:25 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetRdefs ERROR [ 61%] 05:14:36 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testResetDefaults ERROR [ 61%] 05:16:47 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettings ERROR [ 61%] 05:18:58 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsInvalid ERROR [ 61%] 05:21:09 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsBulk ERROR [ 61%] 05:23:20 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetChannelsNoRE ERROR [ 61%] 05:25:31 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsNoRE ERROR [ 61%] 05:27:43 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsWithRE ERROR [ 61%] 05:29:53 test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[True] ERROR [ 61%] 05:32:04 test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[False] ERROR [ 61%] 05:34:15 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testUnregisterService ERROR [ 61%] 05:36:27 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testRegisterService ERROR [ 61%] 05:38:38 test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCloseRE ERROR [ 61%] 05:38:41 test/integration/gatewaytest/test_search_objects.py::TestGetObject::testSearchObjects PASSED [ 61%] 05:38:43 test/integration/gatewaytest/test_services.py::TestServices::testDeleteServiceAuthor PASSED [ 61%] 05:38:45 test/integration/gatewaytest/test_services.py::TestServices::testDeleteServiceAdmin PASSED [ 61%] 05:38:49 test/integration/gatewaytest/test_services.py::TestTables::testTableRead PASSED [ 61%] 05:38:54 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpTrue_16 PASSED [ 61%] 05:38:57 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpTrue_96 PASSED [ 62%] 05:38:59 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpFalse_16 PASSED [ 62%] 05:39:02 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirTrue_grpFalse_96 PASSED [ 62%] 05:39:04 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpTrue_16 PASSED [ 62%] 05:39:07 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpTrue_96 PASSED [ 62%] 05:39:10 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpFalse_16 PASSED [ 62%] 05:39:13 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rw_root_dirFalse_grpFalse_96 PASSED [ 62%] 05:39:15 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpTrue_16 PASSED [ 62%] 05:39:18 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpTrue_96 PASSED [ 62%] 05:39:20 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpFalse_16 PASSED [ 62%] 05:39:23 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirTrue_grpFalse_96 PASSED [ 62%] 05:39:26 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpTrue_16 PASSED [ 62%] 05:39:29 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpTrue_96 PASSED [ 62%] 05:39:31 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpFalse_16 PASSED [ 62%] 05:39:34 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_root_dirFalse_grpFalse_96 PASSED [ 62%] 05:39:38 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpTrue_16 PASSED [ 62%] 05:39:43 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpTrue_96 PASSED [ 62%] 05:39:48 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpFalse_16 PASSED [ 62%] 05:39:53 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirTrue_grpFalse_96 PASSED [ 62%] 05:39:58 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpTrue_16 PASSED [ 62%] 05:40:03 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpTrue_96 PASSED [ 63%] 05:40:08 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpFalse_16 PASSED [ 63%] 05:40:12 test/integration/gatewaytest/test_ticket10618.py::Test10618::test_rwr_member_dirFalse_grpFalse_96 PASSED [ 63%] 05:40:14 test/integration/gatewaytest/test_user.py::TestUser::testUsers PASSED [ 63%] 05:42:23 test/integration/gatewaytest/test_user.py::TestUser::testSaveAs FAILED [ 63%] 05:42:26 test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupSave PASSED [ 63%] 05:42:37 test/integration/gatewaytest/test_user.py::TestUser::testGroupOverObjPermissions PASSED [ 63%] 05:44:46 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testAllObjectsWrapped ERROR [ 63%] 05:44:47 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testProjectWrapper PASSED [ 63%] 05:46:57 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDatasetWrapper ERROR [ 63%] 05:46:57 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testExperimenterWrapper PASSED [ 63%] 05:49:08 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDetailsWrapper ERROR [ 63%] 05:49:08 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperGetFileInChunks PASSED [ 63%] 05:49:08 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperAsFileObj PASSED [ 63%] 05:49:09 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperAsFileObjContextManager PASSED [ 63%] 05:49:09 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOriginalFileWrapperAsFileObjMultiple PASSED [ 63%] 05:49:09 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testSetters PASSED [ 63%] 05:49:10 test/integration/gatewaytest/test_wrapper.py::TestWrapper::testOther PASSED [ 63%] 05:49:12 test/integration/metadata/test_metadata_mapannotations.py::TestMapAnnotationManager::test_add_from_namespace_query PASSED [ 63%] 05:49:12 test/integration/metadata/test_metadata_mapannotations.py::TestMapAnnotationManager::test_add_from_namespace_query_duplicate PASSED [ 63%] 05:49:12 test/integration/metadata/test_metadata_mapannotations.py::TestMapAnnotationManager::test_update_existing_mapann PASSED [ 64%] 05:49:14 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigLoad::test_get_config_local PASSED [ 64%] 05:49:14 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigLoad::test_get_config_remote PASSED [ 64%] 05:49:26 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Screen2Plates] PASSED [ 64%] 05:49:31 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Plate2Wells] PASSED [ 64%] 05:49:35 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images] PASSED [ 64%] 05:49:39 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images1Missing] PASSED [ 64%] 05:49:48 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset101Images] PASSED [ 64%] 05:49:56 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Project2Datasets] PASSED [ 64%] 05:50:00 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-GZIP] PASSED [ 64%] 05:50:01 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Screen2Plates] PASSED [ 64%] 05:50:01 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Plate2Wells] PASSED [ 64%] 05:50:02 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images] PASSED [ 64%] 05:50:02 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images1Missing] PASSED [ 64%] 05:50:07 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset101Images] PASSED [ 64%] 05:50:07 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Project2Datasets] PASSED [ 64%] 05:50:08 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-GZIP] PASSED [ 64%] 05:50:08 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Screen2Plates] PASSED [ 64%] 05:50:09 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Plate2Wells] PASSED [ 64%] 05:50:09 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images] PASSED [ 64%] 05:50:10 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images1Missing] PASSED [ 64%] 05:50:12 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset101Images] PASSED [ 65%] 05:50:12 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Project2Datasets] PASSED [ 65%] 05:50:13 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-GZIP] PASSED [ 65%] 05:50:18 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnns[Plate2WellsNs] PASSED [ 65%] 05:50:23 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnns[Plate2WellsNs2] PASSED [ 65%] 05:50:28 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnnsUnavailableHeader PASSED [ 65%] 05:50:32 test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadataNsAnnsFail PASSED [ 65%] 05:50:44 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedup[None] PASSED [ 65%] 05:50:56 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedup[openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%] 05:51:07 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedup[openmicroscopy.org/mapr/gene] PASSED [ 65%] 05:51:19 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedupDelete[None] PASSED [ 65%] 05:51:31 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedupDelete[openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%] 05:51:44 test/integration/metadata/test_populate.py::TestPopulateMetadataDedup::testPopulateMetadataNsAnnsDedupDelete[openmicroscopy.org/mapr/gene] PASSED [ 65%] 05:51:50 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[True-None] PASSED [ 65%] 05:51:57 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[True-openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%] 05:52:04 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[True-openmicroscopy.org/omero/bulk_annotations/config] PASSED [ 65%] 05:52:11 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[False-None] PASSED [ 65%] 05:52:17 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[False-openmicroscopy.org/omero/bulk_annotations] PASSED [ 65%] 05:52:23 test/integration/metadata/test_populate.py::TestPopulateMetadataConfigFiles::test_delete_attach[False-openmicroscopy.org/omero/bulk_annotations/config] PASSED [ 65%] 05:52:30 test/integration/metadata/test_populate.py::TestPopulateRois::testPopulateRoisPlate PASSED [ 65%] 05:52:32 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_yaml[yaml] PASSED [ 66%] 05:52:32 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_yaml[Yml] PASSED [ 66%] 05:52:32 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_json[json] PASSED [ 66%] 05:52:32 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_filename_json[JS] PASSED [ 66%] 05:52:32 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_yaml[format0] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_yaml[format1] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_yaml[format2] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_json[format0] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_json[format1] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_get_format_originalfileid_json[format2] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[json-True] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[json-False] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[yaml-True] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load[yaml-False] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load_fromstring PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_load_invalidtype PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_dump[json] PASSED [ 66%] 05:52:33 test/integration/metadata/test_pydict_text.py::TestPydictTextIo::test_dump[yaml] PASSED [ 66%] 05:52:36 test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testDefinition PASSED [ 66%] 05:52:36 test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testSimpleScript PASSED [ 66%] 05:52:54 test/integration/scriptstest/test_cli.py::TestCLI::testCLI PASSED [ 67%] 05:52:57 test/integration/scriptstest/test_coverage.py::TestCoverage::testGetScriptWithDetails PASSED [ 67%] 05:53:07 test/integration/scriptstest/test_coverage.py::TestCoverage::testUploadAndScript PASSED [ 67%] 05:53:07 test/integration/scriptstest/test_coverage.py::TestCoverage::testUserCantUploadOfficalScript PASSED [ 67%] 05:53:25 test/integration/scriptstest/test_inputs.py::TestInputs::testInputs PASSED [ 67%] 05:53:29 test/integration/scriptstest/test_ping.py::TestPing::testPingViaISCript PASSED [ 67%] 05:53:30 test/integration/scriptstest/test_ping.py::TestPing::testPingParametersViaISCript PASSED [ 67%] 05:53:31 test/integration/scriptstest/test_ping.py::TestPing::testPingStdout PASSED [ 67%] 05:53:38 test/integration/scriptstest/test_ping.py::TestPing::testProcessShutdown PASSED [ 67%] 05:53:39 test/integration/scriptstest/test_ping.py::TestPing::testProcessShutdownOneway PASSED [ 67%] 05:53:41 test/integration/scriptstest/test_ping.py::TestPing::testProcessorGetResultsBeforeFinished PASSED [ 67%] 05:53:41 test/integration/scriptstest/test_ping.py::TestPing::testProcessorExpires PASSED [ 67%] 05:53:42 test/integration/scriptstest/test_ping.py::TestPing::testProcessorGetJob PASSED [ 67%] 05:53:43 test/integration/scriptstest/test_ping.py::TestPing::testProcessorStop PASSED [ 67%] 05:53:44 test/integration/scriptstest/test_ping.py::TestPing::testProcessorDetach PASSED [ 67%] 05:54:02 test/integration/scriptstest/test_rand.py::TestRand::testRand PASSED [ 67%] 05:54:04 test/integration/scriptstest/test_repo.py::TestScriptRepo::testScriptRepo PASSED [ 67%] 05:54:04 test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetOfficialScripts PASSED [ 67%] 05:54:15 test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetUserScripts PASSED [ 67%] 05:54:15 test/integration/scriptstest/test_repo.py::TestScriptRepo::testCantUndulyLoadScriptRepoFromUuid PASSED [ 67%] 05:54:15 test/integration/scriptstest/test_repo.py::TestScriptRepo::testMultipleScriptPathsNotSupported PASSED [ 68%] 05:54:15 test/integration/scriptstest/test_repo.py::TestScriptRepo::testUploadingViaOfficialScriptShowsUpInRepo PASSED [ 68%] 05:54:15 test/integration/scriptstest/test_repo.py::TestScriptRepo::testUploadingViaNonOfficialScriptDoesntShowUpInRepo PASSED [ 68%] 05:54:19 test/integration/scriptstest/test_roi_handling_utils.py::TestRoiHandlingUtils::test_get_line_data PASSED [ 68%] 05:54:24 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_split_image PASSED [ 68%] 05:54:27 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_to_image PASSED [ 68%] 05:54:30 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_convert_numpy_array PASSED [ 68%] 05:54:32 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-tiff] Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7f029a629a60> 05:54:32 Traceback (most recent call last): 05:54:32 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__ 05:54:32 self.close() 05:54:32 File "/usr/lib64/python3.9/tempfile.py", line 457, in close 05:54:32 unlink(self.name) 05:54:32 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpylg79jb8.tiff' 05:54:32 PASSED [ 68%] 05:54:35 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-foo] Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7f029a629a60> 05:54:35 Traceback (most recent call last): 05:54:35 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__ 05:54:35 self.close() 05:54:35 File "/usr/lib64/python3.9/tempfile.py", line 457, in close 05:54:35 unlink(self.name) 05:54:35 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpw_sr2e4p.foo' 05:54:35 PASSED [ 68%] 05:54:38 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[False-tiff] PASSED [ 68%] 05:54:41 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[False-foo] PASSED [ 68%] 05:54:41 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_create_file[] PASSED [ 68%] 05:54:41 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_create_file[text/x-python] PASSED [ 68%] 05:54:41 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_calc_sha1 PASSED [ 68%] 05:54:41 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_upload_file PASSED [ 68%] 05:54:41 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_download_file PASSED [ 68%] 05:54:44 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_get_objects PASSED [ 68%] 05:54:46 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_download_plane PASSED [ 68%] 05:54:48 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_upload_plane_by_row PASSED [ 68%] 05:54:51 test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_upload_plane PASSED [ 68%] 05:54:53 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_4_4_5::testCreateAllColumns_4_4_5 PASSED [ 68%] 05:54:55 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_4_4_5::testAllColumns_4_4_5 PASSED [ 69%] 05:54:56 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_4_4_5::testMetadataException PASSED [ 69%] 05:54:58 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_5_3_4::testCreateAllColumnsAndMetadata_5_3_4 PASSED [ 69%] 05:55:00 test/integration/tablestest/test_backwards_compatibility.py::TestBackwardsCompatibility_5_3_4::testAllColumnsAndMetadata_5_3_4 PASSED [ 69%] 05:55:02 test/integration/tablestest/test_populate_metadata.py::TestPopulateMetadata::testPopulateMetadataPlate PASSED [ 69%] 05:55:05 test/integration/tablestest/test_service.py::TestTables::testBlankTable PASSED [ 69%] 05:55:05 test/integration/tablestest/test_service.py::TestTables::testUpdate PASSED [ 69%] 05:55:05 test/integration/tablestest/test_service.py::TestTables::testTicket2175 PASSED [ 69%] 05:55:05 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test/integration/test_isession.py::TestISession::testCreateUserSessionFromSudo[True] PASSED [ 78%] 06:02:26 test/integration/test_isession.py::TestISession::testCreateUserSessionFromSudo[False] PASSED [ 79%] 06:02:28 test/integration/test_ishare.py::TestIShare::test_that_permissions_are_default_private PASSED [ 79%] 06:02:30 test/integration/test_ishare.py::TestIShare::test_basic_usage PASSED [ 79%] 06:02:33 test/integration/test_ishare.py::TestIShare::test_canDoAction[canEdit] PASSED [ 79%] 06:02:35 test/integration/test_ishare.py::TestIShare::test_canDoAction[canAnnotate] PASSED [ 79%] 06:02:38 test/integration/test_ishare.py::TestIShare::test_canDoAction[canDelete] PASSED [ 79%] 06:02:40 test/integration/test_ishare.py::TestIShare::test_canDoAction[canLink] PASSED [ 79%] 06:02:43 test/integration/test_ishare.py::TestIShare::test8118 PASSED [ 79%] 06:02:47 test/integration/test_ishare.py::TestIShare::test1154 PASSED [ 79%] 06:02:52 test/integration/test_ishare.py::TestIShare::testCanAnnotate PASSED [ 79%] 06:02:57 test/integration/test_ishare.py::TestIShare::test1157 PASSED [ 79%] 06:02:57 test/integration/test_ishare.py::TestIShare::test1179 PASSED [ 79%] 06:03:02 test/integration/test_ishare.py::TestIShare::test1201 PASSED [ 79%] 06:03:04 test/integration/test_ishare.py::TestIShare::test1201b PASSED [ 79%] 06:03:11 test/integration/test_ishare.py::TestIShare::test1207 PASSED [ 79%] 06:03:14 test/integration/test_ishare.py::TestIShare::test1227 PASSED [ 79%] 06:03:19 test/integration/test_ishare.py::TestIShare::test2327 PASSED [ 79%] 06:03:23 test/integration/test_ishare.py::TestIShare::test2733 PASSED [ 79%] 06:03:35 test/integration/test_ishare.py::TestIShare::test2733Access PASSED [ 79%] 06:03:42 test/integration/test_ishare.py::TestIShare::test3214 PASSED [ 79%] 06:03:42 test/integration/test_ishare.py::TestIShare::test5711 PASSED [ 80%] 06:03:45 test/integration/test_ishare.py::TestIShare::test5756Raw PASSED [ 80%] 06:03:47 test/integration/test_ishare.py::TestIShare::test5756Wrapped PASSED [ 80%] 06:03:52 test/integration/test_ishare.py::TestIShare::test5851 PASSED [ 80%] 06:03:52 test/integration/test_ishare.py::TestIShare::test2513 PASSED [ 80%] 06:03:57 test/integration/test_ishare.py::TestIShare::test_OS_regular_user PASSED [ 80%] 06:04:04 test/integration/test_ishare.py::TestIShare::test_OS_non_member PASSED [ 80%] 06:04:09 test/integration/test_ishare.py::TestIShare::test_OS_admin_user PASSED [ 80%] 06:04:09 test/integration/test_ishare.py::TestIShare::test_bad_share PASSED [ 80%] 06:04:13 test/integration/test_ishare.py::TestIShare::test8513 PASSED [ 80%] 06:04:18 test/integration/test_ishare.py::TestIShare::test8704 PASSED [ 80%] 06:04:24 test/integration/test_ishare.py::TestIShare::test13018 PASSED [ 80%] 06:04:27 test/integration/test_itimeline.py::TestITimeline::testGeneral PASSED [ 80%] 06:04:29 test/integration/test_itimeline.py::TestITimeline::testCollaborativeTimeline PASSED [ 80%] 06:04:32 test/integration/test_itimeline.py::TestITimeline::test1173 PASSED [ 80%] 06:04:32 test/integration/test_itimeline.py::TestITimeline::test1175 PASSED [ 80%] 06:04:32 test/integration/test_itimeline.py::TestITimeline::test3234 PASSED [ 80%] 06:04:35 test/integration/test_itypes.py::TestTypes::testGetEnumerationTypes PASSED [ 80%] 06:04:35 test/integration/test_itypes.py::TestTypes::testAllEnumerations PASSED [ 80%] 06:04:35 test/integration/test_itypes.py::TestTypes::testGetEnumerationWithEntries PASSED [ 80%] 06:04:35 test/integration/test_itypes.py::TestTypes::testManageEnumeration PASSED [ 80%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testSaveArray PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testSaveCollection PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoOnCreation PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoAfterCreationTransient PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoAfterCreationManaged PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoNewInstance PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoNullInstance PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testExternalInfoUpdateInstance PASSED [ 81%] 06:04:37 test/integration/test_iupdate.py::TestIUpdate::testCannotSaveDeleted PASSED [ 81%] 06:04:41 test/integration/test_librarytest.py::TestLibrary::test9188 PASSED [ 81%] 06:04:45 test/integration/test_mail.py::TestMail::testEveryone PASSED [ 81%] 06:04:48 test/integration/test_mail.py::TestMail::testUserAdd PASSED [ 81%] 06:04:53 test/integration/test_mail.py::TestMail::testComment PASSED [ 81%] 06:04:55 test/integration/test_mapannotation.py::TestMapAnnotation::testMapStringField PASSED [ 81%] 06:04:55 test/integration/test_mapannotation.py::TestMapAnnotation::testGroupConfigA[data0] PASSED [ 81%] 06:04:55 test/integration/test_mapannotation.py::TestMapAnnotation::testGroupConfigA[data1] PASSED [ 81%] 06:04:55 test/integration/test_mapannotation.py::TestMapAnnotation::testGroupConfigEdit PASSED [ 81%] 06:04:55 test/integration/test_mapannotation.py::TestMapAnnotation::testEmptyItem PASSED [ 81%] 06:04:55 test/integration/test_mapannotation.py::TestMapAnnotation::testBigKeys PASSED [ 81%] 06:04:58 test/integration/test_metadatastore.py::TestMetadataStore::testBasicUsage PASSED [ 81%] 06:04:58 test/integration/test_metadatastore.py::TestMetadataStore::testMetadataService PASSED [ 82%] 06:05:05 test/integration/test_model51.py::TestModel51::testExposureTime PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testPhysicalSize PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[YOTTAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[ZETTAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[EXAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[PETAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[TERAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[GIGAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[MEGAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[KILOMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[HECTOMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[DECAMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[METER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[DECIMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[CENTIMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[MILLIMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[MICROMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[NANOMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[PICOMETER] PASSED [ 82%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[FEMTOMETER] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[ATTOMETER] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[ZEPTOMETER] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[YOCTOMETER] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[ANGSTROM] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[ASTRONOMICALUNIT] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[LIGHTYEAR] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[PARSEC] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[THOU] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[LINE] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[INCH] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[FOOT] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[YARD] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[MILE] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[POINT] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[PIXEL] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAllLengths[REFERENCEFRAME] PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testAsMapMethod PASSED [ 83%] 06:05:08 test/integration/test_model51.py::TestModel51::testMapEagerFetch PASSED [ 83%] 06:05:13 test/integration/test_model51.py::TestModel51::testMapSecurity PASSED [ 83%] 06:05:17 test/integration/test_model51.py::TestModel51::testUnitProjections PASSED [ 84%] 06:05:19 test/integration/test_permissions.py::TestPermissions::testLoginToPublicGroupTicket1940 PASSED [ 84%] 06:05:21 test/integration/test_permissions.py::TestPermissions::testLinkingInPrivateGroup PASSED [ 84%] 06:05:21 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePrivateGroup PASSED [ 84%] 06:05:21 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePublicGroupReadOnly PASSED [ 84%] 06:05:21 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePublicGroupReadAnnotate PASSED [ 84%] 06:05:21 test/integration/test_permissions.py::TestPermissions::testCreatAndUpdatePublicGroup PASSED [ 84%] 06:05:22 test/integration/test_permissions.py::TestPermissions::testCreatGroupAndchangePermissions PASSED [ 84%] 06:05:25 test/integration/test_permissions.py::TestPermissions::testGroupOwners PASSED [ 84%] 06:05:25 test/integration/test_permissions.py::TestPermissions::testSearchAllGroups PASSED [ 84%] 06:05:27 test/integration/test_permissions.py::TestPermissions::testOGContextParameter PASSED [ 84%] 06:05:30 test/integration/test_permissions.py::TestPermissions::testOGSetImplicitContext PASSED [ 84%] 06:05:33 test/integration/test_permissions.py::TestPermissions::testOGSetProxyContext PASSED [ 84%] 06:05:35 test/integration/test_permissions.py::TestPermissions::testOGSetSecurityContext PASSED [ 84%] 06:05:38 test/integration/test_permissions.py::TestPermissions::testOGArg PASSED [ 84%] 06:05:40 test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneNotExplicit PASSED [ 84%] 06:05:45 test/integration/test_permissions.py::TestPermissions::testPrivateGroupCallContext PASSED [ 84%] 06:05:45 test/integration/test_permissions.py::TestPermissions::testAdminCanQueryWithGroupMinusOneTicket9632 PASSED [ 84%] 06:05:50 test/integration/test_permissions.py::TestPermissions::testOmeroUserAsAdmin PASSED [ 84%] 06:05:55 test/integration/test_permissions.py::TestPermissions::testOmeroUserAsNonAdmin PASSED [ 84%] 06:05:55 test/integration/test_permissions.py::TestPermissions::testImmutablePermissions PASSED [ 84%] 06:05:55 test/integration/test_permissions.py::TestPermissions::testDisallow PASSED [ 85%] 06:05:55 test/integration/test_permissions.py::TestPermissions::testClientSet PASSED [ 85%] 06:05:58 test/integration/test_permissions.py::TestPermissions::testAdminUseOfRawPixelsBean PASSED [ 85%] 06:06:01 test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadGroupMinusOne PASSED [ 85%] 06:06:03 test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroup PASSED [ 85%] 06:06:11 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----admin-admin] PASSED [ 85%] 06:06:15 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----admin-owner] PASSED [ 85%] 06:06:20 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----admin-member] PASSED [ 85%] 06:06:25 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----owner-admin] PASSED [ 85%] 06:06:30 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----owner-owner] PASSED [ 85%] 06:06:35 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----owner-member] PASSED [ 85%] 06:06:40 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----member-admin] PASSED [ 85%] 06:06:44 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----member-owner] PASSED [ 85%] 06:06:49 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rw-----member-member] PASSED [ 85%] 06:06:54 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----admin-admin] PASSED [ 85%] 06:06:59 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----admin-owner] PASSED [ 85%] 06:07:04 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----admin-member] PASSED [ 85%] 06:07:09 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----owner-admin] PASSED [ 85%] 06:07:14 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----owner-owner] PASSED [ 85%] 06:07:18 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----owner-member] PASSED [ 85%] 06:07:23 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----member-admin] PASSED [ 86%] 06:07:28 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----member-owner] PASSED [ 86%] 06:07:33 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwr----member-member] PASSED [ 86%] 06:07:38 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---admin-admin] PASSED [ 86%] 06:07:43 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---admin-owner] PASSED [ 86%] 06:07:48 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---admin-member] PASSED [ 86%] 06:07:53 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---owner-admin] PASSED [ 86%] 06:07:58 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---owner-owner] PASSED [ 86%] 06:08:03 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---owner-member] PASSED [ 86%] 06:08:08 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---member-admin] PASSED [ 86%] 06:08:13 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---member-owner] PASSED [ 86%] 06:08:18 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwra---member-member] PASSED [ 86%] 06:08:23 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---admin-admin] PASSED [ 86%] 06:08:28 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---admin-owner] PASSED [ 86%] 06:08:32 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---admin-member] PASSED [ 86%] 06:08:37 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---owner-admin] PASSED [ 86%] 06:08:42 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---owner-owner] PASSED [ 86%] 06:08:47 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---owner-member] PASSED [ 86%] 06:08:52 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---member-admin] PASSED [ 86%] 06:08:57 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---member-owner] PASSED [ 86%] 06:09:02 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissionsWorkaround[rwrw---member-member] PASSED [ 87%] 06:09:07 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----admin-admin] PASSED [ 87%] 06:09:12 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----admin-owner] PASSED [ 87%] 06:09:17 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----admin-member] PASSED [ 87%] 06:09:22 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----owner-admin] PASSED [ 87%] 06:09:27 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----owner-owner] PASSED [ 87%] 06:09:32 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----owner-member] PASSED [ 87%] 06:09:37 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----member-admin] PASSED [ 87%] 06:09:42 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----member-owner] PASSED [ 87%] 06:09:46 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rw-----member-member] PASSED [ 87%] 06:09:51 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----admin-admin] PASSED [ 87%] 06:09:56 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----admin-owner] PASSED [ 87%] 06:10:01 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----admin-member] PASSED [ 87%] 06:10:06 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----owner-admin] PASSED [ 87%] 06:10:11 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----owner-owner] PASSED [ 87%] 06:10:16 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----owner-member] PASSED [ 87%] 06:10:21 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----member-admin] PASSED [ 87%] 06:10:26 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----member-owner] PASSED [ 87%] 06:10:31 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwr----member-member] PASSED [ 87%] 06:10:36 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---admin-admin] PASSED [ 87%] 06:10:41 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---admin-owner] PASSED [ 88%] 06:10:46 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---admin-member] PASSED [ 88%] 06:10:51 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---owner-admin] PASSED [ 88%] 06:10:56 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---owner-owner] PASSED [ 88%] 06:11:01 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---owner-member] PASSED [ 88%] 06:11:06 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---member-admin] PASSED [ 88%] 06:11:11 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---member-owner] PASSED [ 88%] 06:11:16 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwra---member-member] PASSED [ 88%] 06:11:20 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---admin-admin] PASSED [ 88%] 06:11:25 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---admin-owner] PASSED [ 88%] 06:11:30 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---admin-member] PASSED [ 88%] 06:11:35 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---owner-admin] PASSED [ 88%] 06:11:40 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---owner-owner] PASSED [ 88%] 06:11:45 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---owner-member] PASSED [ 88%] 06:11:50 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---member-admin] PASSED [ 88%] 06:11:55 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---member-owner] PASSED [ 88%] 06:12:00 test/integration/test_permissions.py::TestPermissionProjections::testProjectionPermissions[rwrw---member-member] PASSED [ 88%] 06:12:00 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[PlateI] SKIPPED [ 88%] 06:12:00 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[WellI] SKIPPED [ 88%] 06:12:00 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[ImageI] SKIPPED [ 88%] 06:12:00 test/integration/test_permissions.py::TestPermissionProjections::testExtendedRestrictions[FileAnnotationI] SKIPPED [ 88%] 06:12:04 test/integration/test_pixelsService.py::TestPixelsService::test9655 PASSED [ 89%] 06:12:06 test/integration/test_rawfilestore.py::TestRFS::testNullSize11743 PASSED [ 89%] 06:12:06 test/integration/test_rawfilestore.py::TestRFS::testGetFileId PASSED [ 89%] 06:12:11 test/integration/test_rawpixelsstore.py::TestRPS::testTicket4737WithClose PASSED [ 89%] 06:12:14 test/integration/test_rawpixelsstore.py::TestRPS::testTicket4737WithSave PASSED [ 89%] 06:12:17 test/integration/test_rawpixelsstore.py::TestRPS::testTicket4737WithForEachTile PASSED [ 89%] 06:12:21 test/integration/test_rawpixelsstore.py::TestRPS::testBigPlane PASSED [ 89%] 06:12:33 test/integration/test_rawpixelsstore.py::TestRPS::testRomioToPyramid PASSED [ 89%] 06:12:46 test/integration/test_rawpixelsstore.py::TestRPS::test2RomioToPyramidWithNegOne PASSED [ 89%] 06:13:09 test/integration/test_rawpixelsstore.py::TestRPS::testPyramidConcurrentAccess PASSED [ 89%] 06:13:17 test/integration/test_rawpixelsstore.py::TestTiles::testTiles PASSED [ 89%] 06:13:35 test/integration/test_reimport.py::TestReimportArchivedFiles::testConvertSynthetic PASSED [ 89%] 06:13:38 test/integration/test_render.py::TestRendering::test_render_region PASSED [ 89%] 06:13:41 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::test_dir PASSED [ 89%] 06:13:41 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testCreate PASSED [ 89%] 06:13:41 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test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-saveCurrent] PASSED [ 96%] 06:22:30 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-saveAs] PASSED [ 96%] 06:22:35 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-request] PASSED [ 96%] 06:22:41 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-resetDefault] PASSED [ 96%] 06:22:46 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readOnly-resetDefaultNoSave] PASSED [ 96%] 06:22:52 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-saveCurrent] PASSED [ 96%] 06:22:57 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::test12145ShareSettingsRnd[admin-readAnnotate-saveAs] PASSED [ 96%] 06:23:03 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test/integration/test_thumbs.py::TestThumbs::testGetThumbnailByLongestSidex60 PASSED [ 98%] 06:25:55 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailDirectx64x60 PASSED [ 98%] 06:25:58 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailForSectionDirectx0x0x64x60 PASSED [ 98%] 06:26:06 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailSetx64x64 PASSED [ 98%] 06:26:13 test/integration/test_thumbs.py::TestThumbs::testGetThumbnailByLongestSideSetx64 PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test711 PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test843 PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test880 PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test883WithoutClose PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test883WithClose PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test883Upload PASSED [ 98%] 06:26:15 test/integration/test_tickets1000.py::TestTicket1000::test985 PASSED [ 98%] 06:26:19 test/integration/test_tickets2000.py::TestTickets2000::test1064 PASSED [ 99%] 06:26:24 test/integration/test_tickets2000.py::TestTickets2000::test1067 PASSED [ 99%] 06:26:24 test/integration/test_tickets2000.py::TestTickets2000::test1027 PASSED [ 99%] 06:26:26 test/integration/test_tickets2000.py::TestTickets2000::test1069 PASSED [ 99%] 06:26:26 test/integration/test_tickets2000.py::TestTickets2000::test1071 PASSED [ 99%] 06:26:31 test/integration/test_tickets2000.py::TestTickets2000::test1071_1 PASSED [ 99%] 06:26:36 test/integration/test_tickets2000.py::TestTickets2000::test1072 PASSED [ 99%] 06:26:36 test/integration/test_tickets2000.py::TestTickets2000::test1088 PASSED [ 99%] 06:26:42 test/integration/test_tickets2000.py::TestTickets2000::test1109 PASSED [ 99%] 06:26:48 test/integration/test_tickets2000.py::TestTickets2000::test1163 PASSED [ 99%] 06:26:48 test/integration/test_tickets2000.py::TestTickets2000::test1183 PASSED [ 99%] 06:26:51 test/integration/test_tickets3000.py::TestTickets3000::test2396 PASSED [ 99%] 06:27:00 test/integration/test_tickets3000.py::TestTickets3000::test2547 PASSED [ 99%] 06:27:01 test/integration/test_tickets3000.py::TestTickets3000::test2628 PASSED [ 99%] 06:27:04 test/integration/test_tickets3000.py::TestTickets3000::test2952 PASSED [ 99%] 06:27:34 test/integration/test_tickets3000.py::TestTickets3000::test2762 PASSED [ 99%] 06:27:39 test/integration/test_tickets4000.py::TestTickets4000::testChangeActiveGroup PASSED [ 99%] 06:27:42 test/integration/test_tickets4000.py::TestTickets4000::testChangeActiveGroupWhenConnectionLost PASSED [ 99%] 06:27:45 test/integration/test_tickets4000.py::TestTickets4000::test3201 PASSED [ 99%] 06:27:45 test/integration/test_tickets4000.py::TestTickets4000::test3131 PASSED [ 99%] 06:27:51 test/integration/test_util.py::TestUpgradeCheck::testReal FAILED [100%] 06:27:51 ==================================== ERRORS ==================================== 06:27:51 ______________ ERROR at setup of TestConnectionMethods.testClose _______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b2bcd00> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f022025f250> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testClose>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f021b2fc1c0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b2bcd00> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f022025f250> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:28:25,056 INFO [ omero.gateway] (MainThread) created connection (uuid=c0aef918-8bf0-4ace-bb07-9544faee9b16) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c0aef918-8bf0-4ace-bb07-9544faee9b16) 06:27:51 _________ ERROR at setup of TestConnectionMethods.testTopLevelObjects __________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236fa1070> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236fa1250> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testTopLevelObjects>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f021b2fc1c0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236fa1070> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236fa1250> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:30:34,380 INFO [ omero.gateway] (MainThread) created connection (uuid=e280688d-a79f-4cec-8213-9ef307f1e42b) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=e280688d-a79f-4cec-8213-9ef307f1e42b) 06:27:51 ____________ ERROR at setup of TestFindObject.testFindExperimenter _____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236e59c70> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236e3dca0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testFindExperimenter>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0236f2e3a0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236e59c70> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236e3dca0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:33:01,235 INFO [ omero.gateway] (MainThread) created connection (uuid=a2a3234b-09dd-4efe-b798-9452622ebc0d) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=a2a3234b-09dd-4efe-b798-9452622ebc0d) 06:27:51 ______________ ERROR at setup of TestGetObject.testGetAnnotations ______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d1ced90> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d1cee50> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testGetAnnotations>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d1ced90> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d1cee50> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:35:38,675 INFO [ omero.gateway] (MainThread) created connection (uuid=eff95d22-c84a-4f41-8431-b38987a8b34f) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=eff95d22-c84a-4f41-8431-b38987a8b34f) 06:27:51 _________________ ERROR at setup of TestGetObject.testGetImage _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02075aeb20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02075ae580> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testGetImage>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02075aeb20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02075ae580> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:37:48,829 INFO [ omero.gateway] (MainThread) created connection (uuid=6da27b96-1072-4c32-bc59-d4402a26177c) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=6da27b96-1072-4c32-bc59-d4402a26177c) 06:27:51 ______ ERROR at setup of TestGetObject.testGetImageLoadPixels[True-True] _______ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b4694f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d89d30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[True-True]>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b4694f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d89d30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:39:59,338 INFO [ omero.gateway] (MainThread) created connection (uuid=0a3bbbb0-0bc9-41d1-9cc1-0c31bfaade24) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=0a3bbbb0-0bc9-41d1-9cc1-0c31bfaade24) 06:27:51 ______ ERROR at setup of TestGetObject.testGetImageLoadPixels[True-False] ______ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d6468e0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02055165e0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[True-False]>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d6468e0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02055165e0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:42:10,428 INFO [ omero.gateway] (MainThread) created connection (uuid=c7318f46-f96e-4467-a2d3-816abd46473c) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c7318f46-f96e-4467-a2d3-816abd46473c) 06:27:51 ______ ERROR at setup of TestGetObject.testGetImageLoadPixels[False-True] ______ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024aa67790> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02205ad730> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[False-True]>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024aa67790> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02205ad730> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:44:21,478 INFO [ omero.gateway] (MainThread) created connection (uuid=747652cb-2ae8-4d07-82b2-2b55f1f20aa5) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=747652cb-2ae8-4d07-82b2-2b55f1f20aa5) 06:27:51 _____ ERROR at setup of TestGetObject.testGetImageLoadPixels[False-False] ______ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0248755ee0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02079e48b0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testGetImageLoadPixels[False-False]>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0248755ee0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02079e48b0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:46:32,567 INFO [ omero.gateway] (MainThread) created connection (uuid=efc58809-5c94-4bc7-ab11-68e79b0cea9b) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=efc58809-5c94-4bc7-ab11-68e79b0cea9b) 06:27:51 ________________ ERROR at setup of TestGetObject.testTraversal _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207238250> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207238790> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg_tiny' for <Function testTraversal>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0196e8a9d0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg_tiny(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTinyTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:61: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:161: in getTinyTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'tinyimg', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207238250> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207238790> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:48:43,664 INFO [ omero.gateway] (MainThread) created connection (uuid=8a9826e2-9af9-4308-af24-5a264c1e3e59) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=8a9826e2-9af9-4308-af24-5a264c1e3e59) 06:27:51 __________________ ERROR at setup of TestImage.testThumbnail ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021da76a60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021da76eb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testThumbnail>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021da76a60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021da76eb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:51:16,401 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:16,407 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:16,446 INFO [ omero.gateway] (MainThread) created connection (uuid=dd643949-0d17-4e49-87ff-b2c5619e6381) 06:27:51 2024-10-24 04:51:16,904 INFO [ omero.gateway] (MainThread) created connection (uuid=c9b28279-b618-4eb8-a6a4-b1ff778c9b91) 06:27:51 2024-10-24 04:51:16,940 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,007 INFO [ omero.gateway] (MainThread) created connection (uuid=9a70eb72-4065-4736-8f92-cd0ebd992d33) 06:27:51 2024-10-24 04:51:17,043 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,081 INFO [ omero.gateway] (MainThread) created connection (uuid=32f168b7-ed5a-4b55-9548-66752a25798c) 06:27:51 2024-10-24 04:51:17,125 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,164 INFO [ omero.gateway] (MainThread) created connection (uuid=8edab2fc-5554-4109-91b6-ec47155bae61) 06:27:51 2024-10-24 04:51:17,203 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,241 INFO [ omero.gateway] (MainThread) created connection (uuid=7e33b4ec-aec6-4f15-942e-fa61bf426720) 06:27:51 2024-10-24 04:51:17,278 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,316 INFO [ omero.gateway] (MainThread) created connection (uuid=bf3cf60a-4575-4d96-86b2-b6f3c616fd33) 06:27:51 2024-10-24 04:51:17,353 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,392 INFO [ omero.gateway] (MainThread) created connection (uuid=51e3b34c-2d8f-4396-a50e-72554b0a1238) 06:27:51 2024-10-24 04:51:17,439 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,476 INFO [ omero.gateway] (MainThread) created connection (uuid=d2a10ca0-557e-423d-aee4-2b99eb2fc012) 06:27:51 2024-10-24 04:51:17,525 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,562 INFO [ omero.gateway] (MainThread) created connection (uuid=69811a9e-7a7b-4907-a611-679bda706805) 06:27:51 2024-10-24 04:51:17,607 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,611 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:51:17,649 INFO [ omero.gateway] (MainThread) created connection (uuid=cb774f86-4871-4c30-99e0-7103123ed12d) 06:27:51 2024-10-24 04:51:17,717 INFO [ omero.gateway] (MainThread) created connection (uuid=6a45c096-94ca-44ce-8c91-6c11667b1ce8) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=dd643949-0d17-4e49-87ff-b2c5619e6381) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c9b28279-b618-4eb8-a6a4-b1ff778c9b91) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9a70eb72-4065-4736-8f92-cd0ebd992d33) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=32f168b7-ed5a-4b55-9548-66752a25798c) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=8edab2fc-5554-4109-91b6-ec47155bae61) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=7e33b4ec-aec6-4f15-942e-fa61bf426720) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=bf3cf60a-4575-4d96-86b2-b6f3c616fd33) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=51e3b34c-2d8f-4396-a50e-72554b0a1238) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d2a10ca0-557e-423d-aee4-2b99eb2fc012) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=69811a9e-7a7b-4907-a611-679bda706805) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=cb774f86-4871-4c30-99e0-7103123ed12d) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=6a45c096-94ca-44ce-8c91-6c11667b1ce8) 06:27:51 _________________ ERROR at setup of TestImage.testThumbnailSet _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0218e90940> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b3356a0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testThumbnailSet>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0218e90940> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b3356a0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:53:26,738 INFO [ omero.gateway] (MainThread) created connection (uuid=c20a2195-ec3c-491f-9872-28a51cd1671e) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c20a2195-ec3c-491f-9872-28a51cd1671e) 06:27:51 _______________ ERROR at setup of TestImage.testRenderingModels ________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d243c10> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d243ca0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRenderingModels>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d243c10> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d243ca0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:55:37,314 INFO [ omero.gateway] (MainThread) created connection (uuid=9e967b96-ead3-40cd-ae7b-a67df863e1f0) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9e967b96-ead3-40cd-ae7b-a67df863e1f0) 06:27:51 _________________ ERROR at setup of TestImage.testSplitChannel _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f025209e910> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02951a0c10> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testSplitChannel>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f025209e910> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02951a0c10> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:57:48,398 INFO [ omero.gateway] (MainThread) created connection (uuid=f6c0d3e5-9409-45a2-970a-fadf74b044b5) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=f6c0d3e5-9409-45a2-970a-fadf74b044b5) 06:27:51 __________________ ERROR at setup of TestImage.testLinePlots ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b6d5ca0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d16bb20> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testLinePlots>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b6d5ca0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d16bb20> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 04:59:59,459 INFO [ omero.gateway] (MainThread) created connection (uuid=69b98b7b-d463-4623-a765-06548264689d) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=69b98b7b-d463-4623-a765-06548264689d) 06:27:51 _________________ ERROR at setup of TestImage.testProjections __________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02203eb0d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024fdcde80> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testProjections>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02203eb0d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024fdcde80> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:02:10,526 INFO [ omero.gateway] (MainThread) created connection (uuid=ae30536e-8aa3-4e6f-b112-4688057b39d3) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=ae30536e-8aa3-4e6f-b112-4688057b39d3) 06:27:51 __________________ ERROR at setup of TestImage.testProperties __________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0220286550> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0248178850> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testProperties>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0220286550> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0248178850> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:04:21,610 INFO [ omero.gateway] (MainThread) created connection (uuid=e91b1503-f5f8-48fe-a9ec-012de08bf428) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=e91b1503-f5f8-48fe-a9ec-012de08bf428) 06:27:51 ________________ ERROR at setup of TestImage.testPixelSizeUnits ________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236fa11c0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236fa1100> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testPixelSizeUnits>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236fa11c0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236fa1100> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:06:32,746 INFO [ omero.gateway] (MainThread) created connection (uuid=9cb7a4e0-bd49-4417-8c9c-e863ae0ec13c) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9cb7a4e0-bd49-4417-8c9c-e863ae0ec13c) 06:27:51 ________________ ERROR at setup of TestImage.testUnitsGetValue _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f022f50ae50> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f022f50aa90> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testUnitsGetValue>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f022f50ae50> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f022f50aa90> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:08:43,764 INFO [ omero.gateway] (MainThread) created connection (uuid=9dff15a5-62d3-4351-a3cc-5c8d289381bc) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9dff15a5-62d3-4351-a3cc-5c8d289381bc) 06:27:51 ____________ ERROR at setup of TestImage.testChannelWavelengthUnits ____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f022026a2b0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f022026ab50> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testChannelWavelengthUnits>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f022026a2b0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f022026ab50> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:10:55,201 INFO [ omero.gateway] (MainThread) created connection (uuid=7832efeb-0aef-4af1-a528-c1884764e735) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=7832efeb-0aef-4af1-a528-c1884764e735) 06:27:51 ______________ ERROR at setup of TestImage.testExposureTimeUnits _______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02061bb6d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d70340> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testExposureTimeUnits>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02061bb6d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d70340> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:13:05,880 INFO [ omero.gateway] (MainThread) created connection (uuid=542b4009-14e6-4455-9e7b-8a4f367c653c) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=542b4009-14e6-4455-9e7b-8a4f367c653c) 06:27:51 __________________ ERROR at setup of TestImage.testShortname ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d65ba60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d65b3d0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testShortname>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d65ba60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d65b3d0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:15:16,954 INFO [ omero.gateway] (MainThread) created connection (uuid=314967b9-33c8-4371-8cff-b55386d7fe57) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=314967b9-33c8-4371-8cff-b55386d7fe57) 06:27:51 __________________ ERROR at setup of TestImage.testImageDate ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0231e11340> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0231e11430> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testImageDate>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0231e11340> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0231e11430> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:17:28,032 INFO [ omero.gateway] (MainThread) created connection (uuid=4fee3276-8e7c-4975-83ef-a31cf62b0820) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=4fee3276-8e7c-4975-83ef-a31cf62b0820) 06:27:51 ________________ ERROR at setup of TestImage.testSimpleMarshal _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0205fd66a0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0205fd6730> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testSimpleMarshal>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0205fd66a0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0205fd6730> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:19:39,158 INFO [ omero.gateway] (MainThread) created connection (uuid=6afce519-9be3-4941-982e-56b631ec4172) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=6afce519-9be3-4941-982e-56b631ec4172) 06:27:51 ____________________ ERROR at setup of TestImage.testExport ____________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02205b7d60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207ab7100> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testExport>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02205b7d60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207ab7100> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:21:50,171 INFO [ omero.gateway] (MainThread) created connection (uuid=3d2a8a72-46ab-4577-a84a-4c309f303821) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=3d2a8a72-46ab-4577-a84a-4c309f303821) 06:27:51 _______________ ERROR at setup of TestImage.testRenderJpegRegion _______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02053407c0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0243714e50> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRenderJpegRegion>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02053407c0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0243714e50> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:24:01,262 INFO [ omero.gateway] (MainThread) created connection (uuid=c450da2c-0d55-42e0-ac16-bca27421fc42) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c450da2c-0d55-42e0-ac16-bca27421fc42) 06:27:51 _________ ERROR at setup of TestImage.testRenderJpegRegion_resolution __________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f020711a700> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02071d70d0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRenderJpegRegion_resolution>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f020711a700> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02071d70d0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:26:12,317 INFO [ omero.gateway] (MainThread) created connection (uuid=9bf0b736-c53d-46df-8709-fc5d718dcf0b) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9bf0b736-c53d-46df-8709-fc5d718dcf0b) 06:27:51 _____ ERROR at setup of TestImage.testRenderJpegRegion_invalid_resolution ______ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b76dfa0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b76d250> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRenderJpegRegion_invalid_resolution>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b76dfa0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b76d250> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:28:23,736 INFO [ omero.gateway] (MainThread) created connection (uuid=047fa684-029e-43a1-a4bc-a1ef0f31b380) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=047fa684-029e-43a1-a4bc-a1ef0f31b380) 06:27:51 ______________ ERROR at setup of TestImage.testRenderBirdsEyeView ______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236d5cfd0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d5cf70> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRenderBirdsEyeView>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236d5cfd0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d5cf70> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:30:34,475 INFO [ omero.gateway] (MainThread) created connection (uuid=3a9df39a-49de-46c6-badc-45ec9e9e141d) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=3a9df39a-49de-46c6-badc-45ec9e9e141d) 06:27:51 ___________ ERROR at setup of TestImage.testRenderBirdsEyeView_Size ____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02071784f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207178c40> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRenderBirdsEyeView_Size>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f024d30ea60> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02071784f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207178c40> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:32:45,553 INFO [ omero.gateway] (MainThread) created connection (uuid=062bee96-9422-425f-b27c-f0f5b3fb33ea) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=062bee96-9422-425f-b27c-f0f5b3fb33ea) 06:27:51 _____________ ERROR at setup of TestPixels.testReuseRawPixelsStore _____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b184fd0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b184f70> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testReuseRawPixelsStore>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b184fd0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b184f70> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:35:14,387 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:14,393 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:14,432 INFO [ omero.gateway] (MainThread) created connection (uuid=892f4a8c-9732-4477-957c-fc9c91897b90) 06:27:51 2024-10-24 05:35:14,909 INFO [ omero.gateway] (MainThread) created connection (uuid=138ea039-f2b4-43bd-b680-bd6454fe69c0) 06:27:51 2024-10-24 05:35:14,944 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:14,983 INFO [ omero.gateway] (MainThread) created connection (uuid=fbbef218-4b76-48ce-80bf-0fc5e7efedb1) 06:27:51 2024-10-24 05:35:15,019 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,059 INFO [ omero.gateway] (MainThread) created connection (uuid=3a3dc5a8-0d1a-430a-a9f2-fb8b39e2bbad) 06:27:51 2024-10-24 05:35:15,100 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,139 INFO [ omero.gateway] (MainThread) created connection (uuid=4fb34144-437c-49ac-925c-94bd31644285) 06:27:51 2024-10-24 05:35:15,182 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,222 INFO [ omero.gateway] (MainThread) created connection (uuid=56a5392d-79d9-404b-bfb3-042574b25d0e) 06:27:51 2024-10-24 05:35:15,262 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,300 INFO [ omero.gateway] (MainThread) created connection (uuid=61ac66ec-aa45-4bb6-ba62-a430a74a3d2c) 06:27:51 2024-10-24 05:35:15,339 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,377 INFO [ omero.gateway] (MainThread) created connection (uuid=a518dbb2-7086-4997-9412-8bd0509794e6) 06:27:51 2024-10-24 05:35:15,425 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,464 INFO [ omero.gateway] (MainThread) created connection (uuid=d72f543a-59d7-4d51-aaed-fe5929f76bc4) 06:27:51 2024-10-24 05:35:15,514 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,551 INFO [ omero.gateway] (MainThread) created connection (uuid=8f1cdd48-df33-441e-af92-8b519832e6fe) 06:27:51 2024-10-24 05:35:15,595 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,598 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:35:15,635 INFO [ omero.gateway] (MainThread) created connection (uuid=d1f04a2e-6b1c-4dc2-b85f-0d440ed47ba2) 06:27:51 2024-10-24 05:35:15,705 INFO [ omero.gateway] (MainThread) created connection (uuid=c956c467-7396-4be2-8e05-3a59148a1d71) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=892f4a8c-9732-4477-957c-fc9c91897b90) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=138ea039-f2b4-43bd-b680-bd6454fe69c0) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=fbbef218-4b76-48ce-80bf-0fc5e7efedb1) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=3a3dc5a8-0d1a-430a-a9f2-fb8b39e2bbad) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=4fb34144-437c-49ac-925c-94bd31644285) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=56a5392d-79d9-404b-bfb3-042574b25d0e) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=61ac66ec-aa45-4bb6-ba62-a430a74a3d2c) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=a518dbb2-7086-4997-9412-8bd0509794e6) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d72f543a-59d7-4d51-aaed-fe5929f76bc4) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=8f1cdd48-df33-441e-af92-8b519832e6fe) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d1f04a2e-6b1c-4dc2-b85f-0d440ed47ba2) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c956c467-7396-4be2-8e05-3a59148a1d71) 06:27:51 __________________ ERROR at setup of TestPixels.testPlaneInfo __________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0206393310> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0206393940> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testPlaneInfo>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0206393310> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0206393940> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:37:24,669 INFO [ omero.gateway] (MainThread) created connection (uuid=006958ad-cf39-4037-9c8e-3b9cb911de0d) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=006958ad-cf39-4037-9c8e-3b9cb911de0d) 06:27:51 _________________ ERROR at setup of TestPixels.testPixelsType __________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b78f550> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d139eb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testPixelsType>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b78f550> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024d139eb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:39:35,196 INFO [ omero.gateway] (MainThread) created connection (uuid=4c5358c5-c12b-4096-9847-ca81352469d5) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=4c5358c5-c12b-4096-9847-ca81352469d5) 06:27:51 ___________________ ERROR at setup of TestPixels.testGetTile ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207213370> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207213040> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetTile>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207213370> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207213040> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:41:46,309 INFO [ omero.gateway] (MainThread) created connection (uuid=178db830-a5ce-4512-9822-4d6d599f3220) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=178db830-a5ce-4512-9822-4d6d599f3220) 06:27:51 __________________ ERROR at setup of TestPixels.testGetPlane ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02071287f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207128190> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetPlane>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02071287f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207128190> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:43:57,291 INFO [ omero.gateway] (MainThread) created connection (uuid=6f11b22e-dd46-4677-832d-1f9bed169276) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=6f11b22e-dd46-4677-832d-1f9bed169276) 06:27:51 ________ ERROR at setup of TestPixels.testGetPlanesExceptionOnGetPlane _________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0218a48b20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0218a48dc0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetPlanesExceptionOnGetPlane>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0218a48b20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0218a48dc0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:46:08,382 INFO [ omero.gateway] (MainThread) created connection (uuid=903d25d0-5060-42f7-9302-b95e8a058ac3) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=903d25d0-5060-42f7-9302-b95e8a058ac3) 06:27:51 __________ ERROR at setup of TestPixels.testGetPlanesExceptionOnClose __________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236f23ee0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236f23a30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetPlanesExceptionOnClose>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236f23ee0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236f23a30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:48:19,418 INFO [ omero.gateway] (MainThread) created connection (uuid=0e3a6664-f946-4094-a287-4582f31e7c37) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=0e3a6664-f946-4094-a287-4582f31e7c37) 06:27:51 __________ ERROR at setup of TestPixels.testGetPlanesExceptionOnBoth ___________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024fb4f190> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024fb4f9d0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetPlanesExceptionOnBoth>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024fb4f190> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024fb4f9d0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:50:30,515 INFO [ omero.gateway] (MainThread) created connection (uuid=d440c3d6-b9a1-4a22-bcb7-20696560b622) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d440c3d6-b9a1-4a22-bcb7-20696560b622) 06:27:51 ________________ ERROR at setup of TestPixels.testGetHistogram _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0196eaec70> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024aea4e20> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetHistogram>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0220174cd0> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0196eaec70> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024aea4e20> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:52:42,162 INFO [ omero.gateway] (MainThread) created connection (uuid=0bb54872-4eab-4081-a7be-8fa31840bf56) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=0bb54872-4eab-4081-a7be-8fa31840bf56) 06:27:51 ___________________ ERROR at setup of TestRDefs.testDefault ____________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207243e20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207243c70> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testDefault>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207243e20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207243c70> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:54:56,373 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:56,381 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:56,426 INFO [ omero.gateway] (MainThread) created connection (uuid=2f5ce2c1-dcdb-4657-bfce-489bb3c6782e) 06:27:51 2024-10-24 05:54:56,980 INFO [ omero.gateway] (MainThread) created connection (uuid=e6ace603-d3d9-4f17-a039-a56b2872a4a4) 06:27:51 2024-10-24 05:54:57,025 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,070 INFO [ omero.gateway] (MainThread) created connection (uuid=ed3b09d2-c6be-4122-9f15-6febd5d12f1e) 06:27:51 2024-10-24 05:54:57,117 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,161 INFO [ omero.gateway] (MainThread) created connection (uuid=5cd37530-1f62-4e6f-9487-b61e5365ea58) 06:27:51 2024-10-24 05:54:57,210 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,263 INFO [ omero.gateway] (MainThread) created connection (uuid=5257d7bc-81ca-4099-ad90-79c0203f39dc) 06:27:51 2024-10-24 05:54:57,315 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,359 INFO [ omero.gateway] (MainThread) created connection (uuid=6e69565f-d48b-4f6f-82b2-a0abf1717e49) 06:27:51 2024-10-24 05:54:57,406 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,454 INFO [ omero.gateway] (MainThread) created connection (uuid=305133fa-cddc-400f-a0da-c8eacfe065b5) 06:27:51 2024-10-24 05:54:57,691 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,738 INFO [ omero.gateway] (MainThread) created connection (uuid=a9967354-2e4c-40eb-ab73-211b67299164) 06:27:51 2024-10-24 05:54:57,799 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,848 INFO [ omero.gateway] (MainThread) created connection (uuid=3454d4c5-f931-499c-ac78-65769e2d5099) 06:27:51 2024-10-24 05:54:57,914 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:57,962 INFO [ omero.gateway] (MainThread) created connection (uuid=958b2547-35dd-4c8d-b9e7-65682cb4110e) 06:27:51 2024-10-24 05:54:58,024 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:58,030 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 05:54:58,077 INFO [ omero.gateway] (MainThread) created connection (uuid=73e3309f-7f04-4a0a-b99f-e8edd09b8b83) 06:27:51 2024-10-24 05:54:58,167 INFO [ omero.gateway] (MainThread) created connection (uuid=0bf040a7-7eef-4e9f-9e6d-2b7a7b27bb74) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=2f5ce2c1-dcdb-4657-bfce-489bb3c6782e) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=e6ace603-d3d9-4f17-a039-a56b2872a4a4) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=ed3b09d2-c6be-4122-9f15-6febd5d12f1e) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=5cd37530-1f62-4e6f-9487-b61e5365ea58) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=5257d7bc-81ca-4099-ad90-79c0203f39dc) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=6e69565f-d48b-4f6f-82b2-a0abf1717e49) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=305133fa-cddc-400f-a0da-c8eacfe065b5) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=a9967354-2e4c-40eb-ab73-211b67299164) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=3454d4c5-f931-499c-ac78-65769e2d5099) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=958b2547-35dd-4c8d-b9e7-65682cb4110e) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=73e3309f-7f04-4a0a-b99f-e8edd09b8b83) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=0bf040a7-7eef-4e9f-9e6d-2b7a7b27bb74) 06:27:51 __________________ ERROR at setup of TestRDefs.testCustomized __________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02063c2130> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02063c21f0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testCustomized>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02063c2130> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02063c21f0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:57:07,869 INFO [ omero.gateway] (MainThread) created connection (uuid=22168e23-32d2-4e55-acfb-28613a615536) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=22168e23-32d2-4e55-acfb-28613a615536) 06:27:51 ________________ ERROR at setup of TestRDefs.testChannelWindows ________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236de2310> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236de2730> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testChannelWindows>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236de2310> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236de2730> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 05:59:18,889 INFO [ omero.gateway] (MainThread) created connection (uuid=1d5b59c9-fc57-47f5-882f-ce509d9a416a) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=1d5b59c9-fc57-47f5-882f-ce509d9a416a) 06:27:51 ______________ ERROR at setup of TestRDefs.testFloatDefaultMinMax ______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02480748e0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0248074850> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testFloatDefaultMinMax>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02480748e0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0248074850> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:01:29,975 INFO [ omero.gateway] (MainThread) created connection (uuid=43a801fa-e332-4bc4-b0fe-c11ef2b598f0) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=43a801fa-e332-4bc4-b0fe-c11ef2b598f0) 06:27:51 _________________ ERROR at setup of TestRDefs.testEmissionWave _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021da8fc70> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021da8fc10> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testEmissionWave>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021da8fc70> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021da8fc10> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:03:41,021 INFO [ omero.gateway] (MainThread) created connection (uuid=2411a4d0-eb06-41e1-aab5-30afde6b8dad) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=2411a4d0-eb06-41e1-aab5-30afde6b8dad) 06:27:51 __________________ ERROR at setup of TestRDefs.testBatchCopy ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207178bb0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207178c40> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testBatchCopy>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207178bb0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207178c40> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:05:52,112 INFO [ omero.gateway] (MainThread) created connection (uuid=783c2510-48e7-4059-92c1-b1444a6dbe81) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=783c2510-48e7-4059-92c1-b1444a6dbe81) 06:27:51 ____________ ERROR at setup of TestRDefs.testGroupBasedPermissions _____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02063936a0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02063930a0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGroupBasedPermissions>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02063936a0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02063930a0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:08:03,169 INFO [ omero.gateway] (MainThread) created connection (uuid=01b678a4-cb77-4b51-a4ba-10b8dacd5d3a) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=01b678a4-cb77-4b51-a4ba-10b8dacd5d3a) 06:27:51 ___________________ ERROR at setup of TestRDefs.testGetRdefs ___________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02075be640> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02075bed60> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetRdefs>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02075be640> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02075bed60> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:10:14,668 INFO [ omero.gateway] (MainThread) created connection (uuid=6813e06a-0a31-4f8d-bd64-1a23d7605574) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=6813e06a-0a31-4f8d-bd64-1a23d7605574) 06:27:51 ________________ ERROR at setup of TestRDefs.testResetDefaults _________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0218c69ca0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207abb940> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testResetDefaults>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0218c69ca0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207abb940> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:12:25,319 INFO [ omero.gateway] (MainThread) created connection (uuid=9c8910ae-fc5b-4dbe-b777-d9b877933445) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9c8910ae-fc5b-4dbe-b777-d9b877933445) 06:27:51 _____________ ERROR at setup of TestRDefs.testQuantizationSettings _____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207dc89d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207dc8130> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testQuantizationSettings>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207dc89d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207dc8130> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:14:36,400 INFO [ omero.gateway] (MainThread) created connection (uuid=115c1894-0c56-4a94-9887-c6e4acfc62ad) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=115c1894-0c56-4a94-9887-c6e4acfc62ad) 06:27:51 _________ ERROR at setup of TestRDefs.testQuantizationSettingsInvalid __________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207d162e0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207d16d30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testQuantizationSettingsInvalid>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207d162e0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207d16d30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:16:47,462 INFO [ omero.gateway] (MainThread) created connection (uuid=aa0cf633-9051-4f62-82e5-7df7efc44cc5) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=aa0cf633-9051-4f62-82e5-7df7efc44cc5) 06:27:51 ___________ ERROR at setup of TestRDefs.testQuantizationSettingsBulk ___________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b4d0d00> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b4d0d30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testQuantizationSettingsBulk>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b4d0d00> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b4d0d30> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:18:58,531 INFO [ omero.gateway] (MainThread) created connection (uuid=b4858ae8-b55c-4e1f-97e0-568c1be0e108) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=b4858ae8-b55c-4e1f-97e0-568c1be0e108) 06:27:51 _______________ ERROR at setup of TestRDefs.testGetChannelsNoRE ________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02520049d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02487c72e0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testGetChannelsNoRE>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02520049d0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02487c72e0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:21:09,600 INFO [ omero.gateway] (MainThread) created connection (uuid=4348c77a-4fdc-4c81-82c1-2e7cf63457f9) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=4348c77a-4fdc-4c81-82c1-2e7cf63457f9) 06:27:51 ____________ ERROR at setup of TestRDefs.testSetActiveChannelsNoRE _____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02071d74f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02071d7220> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testSetActiveChannelsNoRE>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02071d74f0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02071d7220> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:23:20,679 INFO [ omero.gateway] (MainThread) created connection (uuid=a9bee5fd-cd03-4298-a490-1635b671cf34) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=a9bee5fd-cd03-4298-a490-1635b671cf34) 06:27:51 ___________ ERROR at setup of TestRDefs.testSetActiveChannelsWithRE ____________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b7aceb0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b7aca90> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testSetActiveChannelsWithRE>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f021b7aceb0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f021b7aca90> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:25:31,745 INFO [ omero.gateway] (MainThread) created connection (uuid=d7720781-b929-4cd0-8deb-de566b071082) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d7720781-b929-4cd0-8deb-de566b071082) 06:27:51 ___ ERROR at setup of TestRDefs.test_set_active_channels_set_inactive[True] ____ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207a01a30> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207a01e80> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function test_set_active_channels_set_inactive[True]>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207a01a30> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0207a01e80> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:27:43,248 INFO [ omero.gateway] (MainThread) created connection (uuid=9cc432b6-2123-4912-9456-65bfaf355b9d) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=9cc432b6-2123-4912-9456-65bfaf355b9d) 06:27:51 ___ ERROR at setup of TestRDefs.test_set_active_channels_set_inactive[False] ___ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024aebdd60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024aebdeb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function test_set_active_channels_set_inactive[False]>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024aebdd60> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f024aebdeb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:29:53,886 INFO [ omero.gateway] (MainThread) created connection (uuid=b293ad4e-f852-44a8-8451-ed1c1791ad92) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=b293ad4e-f852-44a8-8451-ed1c1791ad92) 06:27:51 ______________ ERROR at setup of TestRDefs.testUnregisterService _______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f020639a0a0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f020639a5b0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testUnregisterService>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f020639a0a0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f020639a5b0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:32:04,972 INFO [ omero.gateway] (MainThread) created connection (uuid=ea907fa1-4985-4605-a33a-45e35712b383) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=ea907fa1-4985-4605-a33a-45e35712b383) 06:27:51 _______________ ERROR at setup of TestRDefs.testRegisterService ________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f020720ce50> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d82100> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testRegisterService>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f020720ce50> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236d82100> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:34:16,049 INFO [ omero.gateway] (MainThread) created connection (uuid=ff799cf0-9bce-4553-83eb-7dc1520e1427) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=ff799cf0-9bce-4553-83eb-7dc1520e1427) 06:27:51 ___________________ ERROR at setup of TestRDefs.testCloseRE ____________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207d2aa00> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0220767220> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testCloseRE>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f0207243640> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0207d2aa00> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0220767220> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:36:27,100 INFO [ omero.gateway] (MainThread) created connection (uuid=1e34c257-dfce-44a6-8eb1-b4710dc3f7fc) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=1e34c257-dfce-44a6-8eb1-b4710dc3f7fc) 06:27:51 _____________ ERROR at setup of TestWrapper.testAllObjectsWrapped ______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02055fa5b0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02055fa850> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testAllObjectsWrapped>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f02206f7040> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02055fa5b0> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02055fa850> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:42:37,188 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:37,193 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:37,236 INFO [ omero.gateway] (MainThread) created connection (uuid=e72c8115-5c87-4316-bf8c-35d724d9a77a) 06:27:51 2024-10-24 06:42:37,717 INFO [ omero.gateway] (MainThread) created connection (uuid=97632c00-f82f-46f7-ad65-82756e2953e0) 06:27:51 2024-10-24 06:42:37,753 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:37,790 INFO [ omero.gateway] (MainThread) created connection (uuid=7f716f6d-a52c-46cc-be74-21103ca1bc4d) 06:27:51 2024-10-24 06:42:37,825 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:37,864 INFO [ omero.gateway] (MainThread) created connection (uuid=622a2656-c27e-4295-a217-d74cf877910c) 06:27:51 2024-10-24 06:42:37,905 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:37,944 INFO [ omero.gateway] (MainThread) created connection (uuid=a80e5a19-b4db-43a4-a147-b8d3e0ebea65) 06:27:51 2024-10-24 06:42:37,987 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,027 INFO [ omero.gateway] (MainThread) created connection (uuid=0d4079bf-4b34-4fd8-9eb0-043a4591c7bc) 06:27:51 2024-10-24 06:42:38,069 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,107 INFO [ omero.gateway] (MainThread) created connection (uuid=5c9dae8f-fe67-4e45-a3ea-898d23781d76) 06:27:51 2024-10-24 06:42:38,148 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,188 INFO [ omero.gateway] (MainThread) created connection (uuid=a2090aec-190e-44de-babc-bc6a0cc4ec6e) 06:27:51 2024-10-24 06:42:38,240 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,284 INFO [ omero.gateway] (MainThread) created connection (uuid=d6b47a35-fd96-4eb6-a9f0-8c18f021d709) 06:27:51 2024-10-24 06:42:38,339 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,379 INFO [ omero.gateway] (MainThread) created connection (uuid=d5a05f63-00ac-4f95-b6e9-3b5e9f22b3ce) 06:27:51 2024-10-24 06:42:38,430 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,433 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:42:38,472 INFO [ omero.gateway] (MainThread) created connection (uuid=d83be2b2-eebe-4967-9f29-80a73dbff0d9) 06:27:51 2024-10-24 06:42:38,551 INFO [ omero.gateway] (MainThread) created connection (uuid=67345447-5634-4537-afe2-98af81859b4f) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=e72c8115-5c87-4316-bf8c-35d724d9a77a) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=97632c00-f82f-46f7-ad65-82756e2953e0) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=7f716f6d-a52c-46cc-be74-21103ca1bc4d) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=622a2656-c27e-4295-a217-d74cf877910c) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=a80e5a19-b4db-43a4-a147-b8d3e0ebea65) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=0d4079bf-4b34-4fd8-9eb0-043a4591c7bc) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=5c9dae8f-fe67-4e45-a3ea-898d23781d76) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=a2090aec-190e-44de-babc-bc6a0cc4ec6e) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d6b47a35-fd96-4eb6-a9f0-8c18f021d709) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d5a05f63-00ac-4f95-b6e9-3b5e9f22b3ce) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d83be2b2-eebe-4967-9f29-80a73dbff0d9) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=67345447-5634-4537-afe2-98af81859b4f) 06:27:51 _______________ ERROR at setup of TestWrapper.testDatasetWrapper _______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02055d4b50> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02055d45b0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testDatasetWrapper>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f02206f7040> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f02055d4b50> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f02055d45b0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:44:47,573 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:44:47,616 INFO [ omero.gateway] (MainThread) created connection (uuid=411e7536-cdb0-4765-b3b2-cad47a6d3cd0) 06:27:51 2024-10-24 06:44:47,696 INFO [ omero.gateway] (MainThread) created connection (uuid=bdc4ecbe-e5d6-449a-94b4-949540529338) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=411e7536-cdb0-4765-b3b2-cad47a6d3cd0) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=bdc4ecbe-e5d6-449a-94b4-949540529338) 06:27:51 _______________ ERROR at setup of TestWrapper.testDetailsWrapper _______________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d2be250> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0205602190> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 request = <SubRequest 'author_testimg' for <Function testDetailsWrapper>> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f02206f7040> 06:27:51 @pytest.fixture(scope='function') 06:27:51 def author_testimg(request, gatewaywrapper): 06:27:51 """ 06:27:51 logs in as Author and returns the test image, creating it first if needed. 06:27:51 """ 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > rv = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/pytest_fixtures.py:81: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f024d2be250> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0205602190> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ---------------------------- Captured stderr setup ----------------------------- 06:27:51 2024-10-24 06:46:57,898 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:46:57,942 INFO [ omero.gateway] (MainThread) created connection (uuid=80fa94d8-352c-4dca-b550-74b642031e68) 06:27:51 2024-10-24 06:46:58,025 INFO [ omero.gateway] (MainThread) created connection (uuid=10629aa4-b040-41bf-9a0f-e2b670b1144e) 06:27:51 I< 06:27:51 ------------------------------ Captured log setup ------------------------------ 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=80fa94d8-352c-4dca-b550-74b642031e68) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=10629aa4-b040-41bf-9a0f-e2b670b1144e) 06:27:51 =================================== FAILURES =================================== 06:27:51 _________________________ TestAdmin.test_checkupgrade0 _________________________ 06:27:51 self = <test.integration.clitest.test_admin.TestAdmin object at 0x7f0295992730> 06:27:51 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7f02617acfd0> 06:27:51 def test_checkupgrade0(self, monkeypatch): 06:27:51 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck", 06:27:51 createUpgradeCheckClass("999999999.0.0")) 06:27:51 self.args.append("checkupgrade") 06:27:51 > self.go() 06:27:51 test/integration/clitest/test_admin.py:66: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 test/integration/clitest/test_admin.py:60: in go 06:27:51 self.cli.invoke(self.args, strict=True) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke 06:27:51 self.assertRC() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <omero.cli.CLI object at 0x7f029aed3be0> 06:27:51 def assertRC(self): 06:27:51 if self.rv != 0: 06:27:51 > raise NonZeroReturnCode(self.rv, "assert failed") 06:27:51 E omero.cli.NonZeroReturnCode: assert failed 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode 06:27:51 ----------------------------- Captured stdout call ----------------------------- 06:27:51 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f0261782070>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 ----------------------------- Captured stderr call ----------------------------- 06:27:51 Error printing text 06:27:51 ------------------------------ Captured log call ------------------------------- 06:27:51 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f0261782070>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 _________________________ TestAdmin.test_checkupgrade1 _________________________ 06:27:51 self = <test.integration.clitest.test_admin.TestAdmin object at 0x7f0295992a90> 06:27:51 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7f0259ed1670> 06:27:51 def test_checkupgrade1(self, monkeypatch): 06:27:51 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck", 06:27:51 createUpgradeCheckClass("0.0.0")) 06:27:51 self.args.append("checkupgrade") 06:27:51 with pytest.raises(NonZeroReturnCode) as exc: 06:27:51 self.go() 06:27:51 > assert exc.value.rv == 1 06:27:51 E AssertionError: assert 2 == 1 06:27:51 E + where 2 = NonZeroReturnCode('assert failed').rv 06:27:51 E + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=4>.value 06:27:51 test/integration/clitest/test_admin.py:74: AssertionError 06:27:51 ----------------------------- Captured stdout call ----------------------------- 06:27:51 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f0259e29130>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 ----------------------------- Captured stderr call ----------------------------- 06:27:51 Error printing text 06:27:51 ------------------------------ Captured log call ------------------------------- 06:27:51 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f0259e29130>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 _________________ TestAdminRestrictedAdmin.test_checkupgrade0 __________________ 06:27:51 self = <test.integration.clitest.test_admin.TestAdminRestrictedAdmin object at 0x7f029599e940> 06:27:51 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7f026641eb20> 06:27:51 def test_checkupgrade0(self, monkeypatch): 06:27:51 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck", 06:27:51 createUpgradeCheckClass("999999999.0.0")) 06:27:51 self.args.append("checkupgrade") 06:27:51 > self.cli.invoke(self.args, strict=True) 06:27:51 test/integration/clitest/test_admin.py:134: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke 06:27:51 self.assertRC() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <omero.cli.CLI object at 0x7f029552c730> 06:27:51 def assertRC(self): 06:27:51 if self.rv != 0: 06:27:51 > raise NonZeroReturnCode(self.rv, "assert failed") 06:27:51 E omero.cli.NonZeroReturnCode: assert failed 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode 06:27:51 ----------------------------- Captured stdout call ----------------------------- 06:27:51 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f02663c4f70>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 ----------------------------- Captured stderr call ----------------------------- 06:27:51 Error printing text 06:27:51 ------------------------------ Captured log call ------------------------------- 06:27:51 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=999999999.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f02663c4f70>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 _________________ TestAdminRestrictedAdmin.test_checkupgrade1 __________________ 06:27:51 self = <test.integration.clitest.test_admin.TestAdminRestrictedAdmin object at 0x7f029599ed00> 06:27:51 monkeypatch = <_pytest.monkeypatch.MonkeyPatch object at 0x7f02664171c0> 06:27:51 def test_checkupgrade1(self, monkeypatch): 06:27:51 monkeypatch.setattr(omero.plugins.prefs, "UpgradeCheck", 06:27:51 createUpgradeCheckClass("0.0.0")) 06:27:51 self.args.append("checkupgrade") 06:27:51 with pytest.raises(NonZeroReturnCode) as exc: 06:27:51 self.cli.invoke(self.args, strict=True) 06:27:51 > assert exc.value.rv == 1 06:27:51 E AssertionError: assert 2 == 1 06:27:51 E + where 2 = NonZeroReturnCode('assert failed').rv 06:27:51 E + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=3>.value 06:27:51 test/integration/clitest/test_admin.py:142: AssertionError 06:27:51 ----------------------------- Captured stdout call ----------------------------- 06:27:51 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f02663ddd30>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 ----------------------------- Captured stderr call ----------------------------- 06:27:51 Error printing text 06:27:51 ------------------------------ Captured log call ------------------------------- 06:27:51 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=0.0.0&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f02663ddd30>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 _____________ TestGetObject.testGetObjectsByMapAnnotations[Image] ______________ 06:27:51 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7f029524e370> 06:27:51 datatype = 'Image' 06:27:51 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project', 06:27:51 'Screen', 'Plate']) 06:27:51 def testGetObjectsByMapAnnotations(self, datatype): 06:27:51 > client, exp = self.new_client_and_user() 06:27:51 test/integration/gatewaytest/test_get_objects.py:767: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user 06:27:51 user = self.new_user(group, owner=owner, system=system, perms=perms, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user 06:27:51 admin_service = cls.root.getSession().getAdminService() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = session-a7a64e87-1558-47a8-b2c2-820dfc5775a0/6c99c8c6-60ac-4368-bc0a-6d4a4ada2232 -t -e 1.1 @ BlitzAdapters 06:27:51 _ctx = None 06:27:51 def getAdminService(self, _ctx=None): 06:27:51 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx)) 06:27:51 E Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 E recv() returned zero 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException 06:27:51 ____________ TestGetObject.testGetObjectsByMapAnnotations[Dataset] _____________ 06:27:51 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7f02951235b0> 06:27:51 datatype = 'Dataset' 06:27:51 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project', 06:27:51 'Screen', 'Plate']) 06:27:51 def testGetObjectsByMapAnnotations(self, datatype): 06:27:51 > client, exp = self.new_client_and_user() 06:27:51 test/integration/gatewaytest/test_get_objects.py:767: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user 06:27:51 user = self.new_user(group, owner=owner, system=system, perms=perms, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user 06:27:51 admin_service = cls.root.getSession().getAdminService() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = session-a7a64e87-1558-47a8-b2c2-820dfc5775a0/6c99c8c6-60ac-4368-bc0a-6d4a4ada2232 -t -e 1.1 @ BlitzAdapters 06:27:51 _ctx = None 06:27:51 def getAdminService(self, _ctx=None): 06:27:51 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx)) 06:27:51 E Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 E recv() returned zero 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException 06:27:51 ____________ TestGetObject.testGetObjectsByMapAnnotations[Project] _____________ 06:27:51 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7f0294b2f610> 06:27:51 datatype = 'Project' 06:27:51 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project', 06:27:51 'Screen', 'Plate']) 06:27:51 def testGetObjectsByMapAnnotations(self, datatype): 06:27:51 > client, exp = self.new_client_and_user() 06:27:51 test/integration/gatewaytest/test_get_objects.py:767: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user 06:27:51 user = self.new_user(group, owner=owner, system=system, perms=perms, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user 06:27:51 admin_service = cls.root.getSession().getAdminService() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = session-a7a64e87-1558-47a8-b2c2-820dfc5775a0/6c99c8c6-60ac-4368-bc0a-6d4a4ada2232 -t -e 1.1 @ BlitzAdapters 06:27:51 _ctx = None 06:27:51 def getAdminService(self, _ctx=None): 06:27:51 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx)) 06:27:51 E Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 E recv() returned zero 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException 06:27:51 _____________ TestGetObject.testGetObjectsByMapAnnotations[Screen] _____________ 06:27:51 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7f0294b2f850> 06:27:51 datatype = 'Screen' 06:27:51 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project', 06:27:51 'Screen', 'Plate']) 06:27:51 def testGetObjectsByMapAnnotations(self, datatype): 06:27:51 > client, exp = self.new_client_and_user() 06:27:51 test/integration/gatewaytest/test_get_objects.py:767: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user 06:27:51 user = self.new_user(group, owner=owner, system=system, perms=perms, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user 06:27:51 admin_service = cls.root.getSession().getAdminService() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = session-a7a64e87-1558-47a8-b2c2-820dfc5775a0/6c99c8c6-60ac-4368-bc0a-6d4a4ada2232 -t -e 1.1 @ BlitzAdapters 06:27:51 _ctx = None 06:27:51 def getAdminService(self, _ctx=None): 06:27:51 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx)) 06:27:51 E Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 E recv() returned zero 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException 06:27:51 _____________ TestGetObject.testGetObjectsByMapAnnotations[Plate] ______________ 06:27:51 self = <test.integration.gatewaytest.test_get_objects.TestGetObject object at 0x7f0294b2f9d0> 06:27:51 datatype = 'Plate' 06:27:51 @pytest.mark.parametrize("datatype", ['Image', 'Dataset', 'Project', 06:27:51 'Screen', 'Plate']) 06:27:51 def testGetObjectsByMapAnnotations(self, datatype): 06:27:51 > client, exp = self.new_client_and_user() 06:27:51 test/integration/gatewaytest/test_get_objects.py:767: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:604: in new_client_and_user 06:27:51 user = self.new_user(group, owner=owner, system=system, perms=perms, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:526: in new_user 06:27:51 admin_service = cls.root.getSession().getAdminService() 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = session-a7a64e87-1558-47a8-b2c2-820dfc5775a0/6c99c8c6-60ac-4368-bc0a-6d4a4ada2232 -t -e 1.1 @ BlitzAdapters 06:27:51 _ctx = None 06:27:51 def getAdminService(self, _ctx=None): 06:27:51 > return _M_omero.api.ServiceFactory._op_getAdminService.invoke(self, ((), _ctx)) 06:27:51 E Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 E recv() returned zero 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero_API_ice.py:704: ConnectionLostException 06:27:51 --------------------------- Captured stderr teardown --------------------------- 06:27:51 2024-10-24 04:50:57,745 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 *2024-10-24 04:50:57,791 INFO [ omero.gateway] (MainThread) created connection (uuid=82a534de-59a2-4157-985f-2e8e5832cc19) 06:27:51 *2024-10-24 04:50:57,950 INFO [ omero.gateway] (MainThread) created connection (uuid=56cf2dfc-82bb-4d97-ab5f-87171446617e) 06:27:51 *2024-10-24 04:50:58,080 INFO [ omero.gateway] (MainThread) created connection (uuid=32feaf89-b941-4243-8459-e5e13179b62d) 06:27:51 *2024-10-24 04:50:58,161 INFO [ omero.gateway] (MainThread) created connection (uuid=b09ce4aa-4eee-481e-ae85-d9247e6f451a) 06:27:51 *2024-10-24 04:50:58,248 INFO [ omero.gateway] (MainThread) created connection (uuid=d7752107-4369-4722-8ac3-932918687fa5) 06:27:51 *2024-10-24 04:50:58,335 INFO [ omero.gateway] (MainThread) created connection (uuid=1a6fb1a2-a92f-474c-916e-cc524adbfc32) 06:27:51 2024-10-24 04:50:58,378 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:50:58,384 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:50:58,422 INFO [ omero.gateway] (MainThread) created connection (uuid=0b0f5472-390e-4634-b0ed-c6e21dbb70af) 06:27:51 2024-10-24 04:50:58,672 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 04:50:58,676 WARNI [ omero.client] (MainThread) Cannot get session service for killSession. Using closeSession 06:27:51 ---------------------------- Captured log teardown ----------------------------- 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=82a534de-59a2-4157-985f-2e8e5832cc19) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=56cf2dfc-82bb-4d97-ab5f-87171446617e) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=32feaf89-b941-4243-8459-e5e13179b62d) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=b09ce4aa-4eee-481e-ae85-d9247e6f451a) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=d7752107-4369-4722-8ac3-932918687fa5) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=1a6fb1a2-a92f-474c-916e-cc524adbfc32) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=0b0f5472-390e-4634-b0ed-c6e21dbb70af) 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 WARNING omero.client:clients.py:1095 Cannot get session service for killSession. Using closeSession 06:27:51 _____________________________ TestUser.testSaveAs ______________________________ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236b3be20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236b3beb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 > h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1346: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 /usr/lib64/python3.9/http/client.py:1285: in request 06:27:51 self._send_request(method, url, body, headers, encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1331: in _send_request 06:27:51 self.endheaders(body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1280: in endheaders 06:27:51 self._send_output(message_body, encode_chunked=encode_chunked) 06:27:51 /usr/lib64/python3.9/http/client.py:1040: in _send_output 06:27:51 self.send(msg) 06:27:51 /usr/lib64/python3.9/http/client.py:980: in send 06:27:51 self.connect() 06:27:51 /usr/lib64/python3.9/http/client.py:1447: in connect 06:27:51 super().connect() 06:27:51 /usr/lib64/python3.9/http/client.py:946: in connect 06:27:51 self.sock = self._create_connection( 06:27:51 /usr/lib64/python3.9/socket.py:844: in create_connection 06:27:51 raise err 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 address = ('downloads.openmicroscopy.org', 443) 06:27:51 timeout = <object object at 0x7f029a050b40>, source_address = None 06:27:51 def create_connection(address, timeout=_GLOBAL_DEFAULT_TIMEOUT, 06:27:51 source_address=None): 06:27:51 """Connect to *address* and return the socket object. 06:27:51 Convenience function. Connect to *address* (a 2-tuple ``(host, 06:27:51 port)``) and return the socket object. Passing the optional 06:27:51 *timeout* parameter will set the timeout on the socket instance 06:27:51 before attempting to connect. If no *timeout* is supplied, the 06:27:51 global default timeout setting returned by :func:`getdefaulttimeout` 06:27:51 is used. If *source_address* is set it must be a tuple of (host, port) 06:27:51 for the socket to bind as a source address before making the connection. 06:27:51 A host of '' or port 0 tells the OS to use the default. 06:27:51 """ 06:27:51 host, port = address 06:27:51 err = None 06:27:51 for res in getaddrinfo(host, port, 0, SOCK_STREAM): 06:27:51 af, socktype, proto, canonname, sa = res 06:27:51 sock = None 06:27:51 try: 06:27:51 sock = socket(af, socktype, proto) 06:27:51 if timeout is not _GLOBAL_DEFAULT_TIMEOUT: 06:27:51 sock.settimeout(timeout) 06:27:51 if source_address: 06:27:51 sock.bind(source_address) 06:27:51 > sock.connect(sa) 06:27:51 E TimeoutError: [Errno 110] Connection timed out 06:27:51 /usr/lib64/python3.9/socket.py:832: TimeoutError 06:27:51 During handling of the above exception, another exception occurred: 06:27:51 self = <test.integration.gatewaytest.test_user.TestUser object at 0x7f0294c66b80> 06:27:51 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f022c8cf130> 06:27:51 def testSaveAs(self, gatewaywrapper): 06:27:51 for u in (gatewaywrapper.AUTHOR, gatewaywrapper.ADMIN): 06:27:51 # Test image should be owned by author 06:27:51 gatewaywrapper.loginAsAuthor() 06:27:51 > image = gatewaywrapper.getTestImage(autocreate=True) 06:27:51 test/integration/gatewaytest/test_user.py:34: 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/testdb_create.py:150: in getTestImage 06:27:51 return dbhelpers.getImage(self.gateway, 'testimg1', forceds=dataset, 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:501: in getImage 06:27:51 i = IMAGES[alias].create() 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/scripts/dbhelpers.py:419: in create 06:27:51 fin = urllib.request.urlopen(TESTIMG_URL + self.filename) 06:27:51 /usr/lib64/python3.9/urllib/request.py:214: in urlopen 06:27:51 return opener.open(url, data, timeout) 06:27:51 /usr/lib64/python3.9/urllib/request.py:517: in open 06:27:51 response = self._open(req, data) 06:27:51 /usr/lib64/python3.9/urllib/request.py:534: in _open 06:27:51 result = self._call_chain(self.handle_open, protocol, protocol + 06:27:51 /usr/lib64/python3.9/urllib/request.py:494: in _call_chain 06:27:51 result = func(*args) 06:27:51 /usr/lib64/python3.9/urllib/request.py:1389: in https_open 06:27:51 return self.do_open(http.client.HTTPSConnection, req, 06:27:51 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 06:27:51 self = <urllib.request.HTTPSHandler object at 0x7f022025f6d0> 06:27:51 http_class = <class 'http.client.HTTPSConnection'> 06:27:51 req = <urllib.request.Request object at 0x7f0236b3be20> 06:27:51 http_conn_args = {'check_hostname': None, 'context': None} 06:27:51 host = 'downloads.openmicroscopy.org' 06:27:51 h = <http.client.HTTPSConnection object at 0x7f0236b3beb0> 06:27:51 def do_open(self, http_class, req, **http_conn_args): 06:27:51 """Return an HTTPResponse object for the request, using http_class. 06:27:51 http_class must implement the HTTPConnection API from http.client. 06:27:51 """ 06:27:51 host = req.host 06:27:51 if not host: 06:27:51 raise URLError('no host given') 06:27:51 # will parse host:port 06:27:51 h = http_class(host, timeout=req.timeout, **http_conn_args) 06:27:51 h.set_debuglevel(self._debuglevel) 06:27:51 headers = dict(req.unredirected_hdrs) 06:27:51 headers.update({k: v for k, v in req.headers.items() 06:27:51 if k not in headers}) 06:27:51 # TODO(jhylton): Should this be redesigned to handle 06:27:51 # persistent connections? 06:27:51 # We want to make an HTTP/1.1 request, but the addinfourl 06:27:51 # class isn't prepared to deal with a persistent connection. 06:27:51 # It will try to read all remaining data from the socket, 06:27:51 # which will block while the server waits for the next request. 06:27:51 # So make sure the connection gets closed after the (only) 06:27:51 # request. 06:27:51 headers["Connection"] = "close" 06:27:51 headers = {name.title(): val for name, val in headers.items()} 06:27:51 if req._tunnel_host: 06:27:51 tunnel_headers = {} 06:27:51 proxy_auth_hdr = "Proxy-Authorization" 06:27:51 if proxy_auth_hdr in headers: 06:27:51 tunnel_headers[proxy_auth_hdr] = headers[proxy_auth_hdr] 06:27:51 # Proxy-Authorization should not be sent to origin 06:27:51 # server. 06:27:51 del headers[proxy_auth_hdr] 06:27:51 h.set_tunnel(req._tunnel_host, headers=tunnel_headers) 06:27:51 try: 06:27:51 try: 06:27:51 h.request(req.get_method(), req.selector, req.data, headers, 06:27:51 encode_chunked=req.has_header('Transfer-encoding')) 06:27:51 except OSError as err: # timeout error 06:27:51 > raise URLError(err) 06:27:51 E urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 /usr/lib64/python3.9/urllib/request.py:1349: URLError 06:27:51 ----------------------------- Captured stderr call ----------------------------- 06:27:51 2024-10-24 06:40:14,382 INFO [ omero.gateway] (MainThread) closed connection (uuid=None) 06:27:51 2024-10-24 06:40:14,420 INFO [ omero.gateway] (MainThread) created connection (uuid=c60e5076-573b-4fe0-817b-67779e52e9c1) 06:27:51 2024-10-24 06:40:14,499 INFO [ omero.gateway] (MainThread) created connection (uuid=c9dedd32-4fa4-459d-8f8b-0082b7d0fd38) 06:27:51 I< 06:27:51 ------------------------------ Captured log call ------------------------------- 06:27:51 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c60e5076-573b-4fe0-817b-67779e52e9c1) 06:27:51 INFO omero.gateway:__init__.py:2243 created connection (uuid=c9dedd32-4fa4-459d-8f8b-0082b7d0fd38) 06:27:51 __________________________ TestUpgradeCheck.testReal ___________________________ 06:27:51 self = <test.integration.test_util.TestUpgradeCheck object at 0x7f028e33e7f0> 06:27:51 def testReal(self): 06:27:51 uc = UpgradeCheck("test", version="test") 06:27:51 uc.run() 06:27:51 > assert uc.isUpgradeNeeded() is True 06:27:51 E assert False is True 06:27:51 E + where False = isUpgradeNeeded() 06:27:51 E + where isUpgradeNeeded = <omero.util.upgrade_check.UpgradeCheck object at 0x7f009c751d60>.isUpgradeNeeded 06:27:51 test/integration/test_util.py:35: AssertionError 06:27:51 ----------------------------- Captured stderr call ----------------------------- 06:27:51 2024-10-24 07:27:51,555 ERROR [ omero.util.UpgradeCheck] (MainThread) HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=test&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f009c751460>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 ------------------------------ Captured log call ------------------------------- 06:27:51 ERROR omero.util.UpgradeCheck:upgrade_check.py:141 HTTPConnectionPool(host='upgrade.openmicroscopy.org.uk', port=80): Max retries exceeded with url: /?version=test&os.name=Linux&os.arch=x86_64&os.version=Linux-5.14.0-427.40.1.el9_4.x86_64-x86_64-with-glibc2.34&python.version=3.9.18&python.compiler=GCC+11.4.1+20231218+%28Red+Hat+11.4.1-3%29&python.build=main&python.build=Aug+23+2024+00%3A00%3A00 (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f009c751460>, 'Connection to upgrade.openmicroscopy.org.uk timed out. (connect timeout=6.0)')) 06:27:51 =============================== warnings summary =============================== 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses 06:27:51 import sys, string, imp, os, threading, warnings, datetime 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior. 06:27:51 warnings.warn( 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead. 06:27:51 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning) 06:27:51 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 06:27:51 from pkg_resources import DistributionNotFound, get_distribution 06:27:51 OmeroPy/test/integration/clitest/test_admin.py: 2 warnings 06:27:51 OmeroPy/test/integration/clitest/test_chgrp.py: 116 warnings 06:27:51 OmeroPy/test/integration/clitest/test_chown.py: 76 warnings 06:27:51 OmeroPy/test/integration/clitest/test_cleanse.py: 7 warnings 06:27:51 OmeroPy/test/integration/clitest/test_delete.py: 81 warnings 06:27:51 OmeroPy/test/integration/clitest/test_download.py: 91 warnings 06:27:51 OmeroPy/test/integration/clitest/test_duplicate.py: 18 warnings 06:27:51 OmeroPy/test/integration/clitest/test_fs.py: 26 warnings 06:27:51 OmeroPy/test/integration/clitest/test_group.py: 154 warnings 06:27:51 OmeroPy/test/integration/clitest/test_import.py: 189 warnings 06:27:51 OmeroPy/test/integration/clitest/test_import_bulk.py: 1 warning 06:27:51 OmeroPy/test/integration/clitest/test_ldap.py: 5 warnings 06:27:51 OmeroPy/test/integration/clitest/test_metadata.py: 10 warnings 06:27:51 OmeroPy/test/integration/clitest/test_obj.py: 56 warnings 06:27:51 OmeroPy/test/integration/clitest/test_pyramids.py: 10 warnings 06:27:51 OmeroPy/test/integration/clitest/test_script.py: 10 warnings 06:27:51 OmeroPy/test/integration/clitest/test_search.py: 16 warnings 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py: 121 warnings 06:27:51 OmeroPy/test/integration/clitest/test_tag.py: 57 warnings 06:27:51 OmeroPy/test/integration/clitest/test_upload.py: 6 warnings 06:27:51 OmeroPy/test/integration/clitest/test_user.py: 183 warnings 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/plugins/sessions.py:176: DeprecationWarning: OMERO_SESSION_DIR is deprecated. Use OMERO_SESSIONDIR instead. 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[1] 06:27:51 OmeroPy/test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[2] 06:27:51 OmeroPy/test/integration/clitest/test_delete.py::TestDelete::testInputWithElisionDefault[3] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/cli.py:2105: DeprecationWarning: 06:27:51 Using '--dry-run'. Future versions will switch to '--force'. Explicitly set the parameter for portability 06:27:51 warnings.warn("\nUsing '--dry-run'.\ 06:27:51 OmeroPy/test/integration/clitest/test_import_bulk.py::TestImportBulk::testBulk 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_import_bulk.py:131: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testBulk1') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_obj.py::TestObj::test_get_unit_and_value 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_model_PixelsI.py:37: DeprecationWarning: Pixels.relatedTo is deprecated 06:27:51 warnings.warn(item + " is deprecated", DeprecationWarning) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[None-True] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLogin_None_True_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[None-False] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLogin_None_False_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-True] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLogin_300_True_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLogin[300-False] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLogin_300_False_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rw----] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginAs_rw_____0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwr---] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginAs_rwr____0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwra--] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginAs_rwra___0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginAs[rwrw--] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginAs_rwrw___0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-True] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginMultiGroup_True_True_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[True-False] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginMultiGroup_True_False0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-True] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginMultiGroup_False_True0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testLoginMultiGroup[False-False] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testLoginMultiGroup_False_Fals0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testGroup 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testGroup0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testTimeout 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testTimeout0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testFile 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testFile0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testKey 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testKey0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testWho[user] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testWho_user_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::testWho[root] 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/testWho_root_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/test_open0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open_with_id 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/test_open_with_id0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_no_sudo 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/test_open_restricted_admin_no_0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_open_restricted_admin_sudo 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/test_open_restricted_admin_sud0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/clitest/test_sessions.py::TestSessions::test_close 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/clitest/test_sessions.py:36: PytestWarning: Value of environment variable OMERO_SESSIONDIR type should be str, but got local('/tmp/pytest-of-omero/pytest-18/test_close0') (type: LocalPath); converted to str implicitly 06:27:51 monkeypatch.setenv("OMERO_SESSIONDIR", tmpdir) 06:27:51 OmeroPy/test/integration/fstest/test_rename.py::TestRename::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/fstest/test_rename.py::TestRename::test_dir returned '9ac4e97b-3b23-4d9c-b3fb-68e3456e0717_3717/631d7c9a-1b75-42ec-a1f1-ac65290924e0', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/gatewaytest/test_annotation.py: 4 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_chmod.py: 28 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_connection.py: 10 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_get_objects.py: 3 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_image_wrapper.py: 3 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_user.py: 1 warning 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 06:27:51 logger.warn("%s on %s to <%s> %s(%r, %r)", 06:27:51 OmeroPy/test/integration/gatewaytest/test_annotation.py: 13 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_chgrp.py: 4 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_chmod.py: 3 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_get_objects.py: 25 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_missing_pyramid.py: 5 warnings 06:27:51 OmeroPy/test/integration/gatewaytest/test_services.py: 2 warnings 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:3824: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. 06:27:51 convertedPlane = byteSwappedPlane.tostring() 06:27:51 OmeroPy/test/integration/gatewaytest/test_delete.py::TestDelete::testDeleteObjectDirect 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4381: DeprecationWarning: Deprecated. Use deleteObject() or deleteObjects() 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFiles 06:27:51 OmeroPy/test/integration/gatewaytest/test_fs.py::TestFileset::testGetArchivedFiles 06:27:51 OmeroPy/test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFiles 06:27:51 OmeroPy/test/integration/gatewaytest/test_fs.py::TestArchivedOriginalFiles::testGetArchivedFiles 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:10236: DeprecationWarning: Deprecated. Use getImportedImageFiles() 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwnerDeprecated 06:27:51 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsOwnerDeprecated 06:27:51 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMemberDeprecated 06:27:51 OmeroPy/test/integration/gatewaytest/test_get_objects.py::TestLeaderAndMemberOfGroup::testGroupSummaryAsMemberDeprecated 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:3048: DeprecationWarning: Deprecated. Use ExperimenterGroupWrapper.groupSummary() 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/gatewaytest/test_ticket10618.py: 24 warnings 06:27:51 OmeroPy/test/integration/scriptstest/test_roi_handling_utils.py: 1 warning 06:27:51 OmeroPy/test/integration/scriptstest/test_script_utils.py: 150 warnings 06:27:51 OmeroPy/test/integration/test_exporter.py: 1 warning 06:27:51 OmeroPy/test/integration/test_ishare.py: 3 warnings 06:27:51 OmeroPy/test/integration/test_librarytest.py: 31 warnings 06:27:51 OmeroPy/test/integration/test_permissions.py: 2 warnings 06:27:51 OmeroPy/test/integration/test_render.py: 1 warning 06:27:51 OmeroPy/test/integration/test_rois.py: 2 warnings 06:27:51 OmeroPy/test/integration/test_scripts.py: 1 warning 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py: 55 warnings 06:27:51 OmeroPy/test/integration/test_tickets1000.py: 1 warning 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. 06:27:51 converted_plane = byte_swapped_plane.tostring() 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Screen2Plates] 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Screen2Plates] 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Screen2Plates] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/populate_metadata.py:905: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 06:27:51 log.warn("PlateColumn is unimplemented") 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images1Missing] 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images1Missing] 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images1Missing] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/populate_metadata.py:955: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 06:27:51 log.warn( 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[None-Dataset2Images1Missing] 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[1-Dataset2Images1Missing] 06:27:51 OmeroPy/test/integration/metadata/test_populate.py::TestPopulateMetadata::testPopulateMetadata[10-Dataset2Images1Missing] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/populate_metadata.py:1389: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 06:27:51 log.warn("Invalid Id:%d found in row %s", row[n], row) 06:27:51 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testDefinition 06:27:51 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testDefinition 06:27:51 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testSimpleScript 06:27:51 OmeroPy/test/integration/scriptsharness/test_harness.py::TestScriptsViaOmeroCli::testSimpleScript 06:27:51 <string>:77: DeprecationWarning: This plugin is deprecated as of OMERO 5.5.0. Use the upload CLI plugin available from https://pypi.org/project/omero-upload/ instead. 06:27:51 OmeroPy/test/integration/scriptstest/test_coverage.py::TestCoverage::testUploadAndScript 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/scriptstest/test_coverage.py::TestCoverage::testUploadAndScript returned 4958, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-tiff] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7f029a629a60> 06:27:51 Traceback (most recent call last): 06:27:51 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__ 06:27:51 self.close() 06:27:51 File "/usr/lib64/python3.9/tempfile.py", line 457, in close 06:27:51 unlink(self.name) 06:27:51 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmp5b940e8l.tiff' 06:27:51 warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 06:27:51 OmeroPy/test/integration/scriptstest/test_script_utils.py::TestScriptUtils::test_numpy_save_as_image[True-foo] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/unraisableexception.py:85: PytestUnraisableExceptionWarning: Exception ignored in: <function _TemporaryFileCloser.__del__ at 0x7f029a629a60> 06:27:51 Traceback (most recent call last): 06:27:51 File "/usr/lib64/python3.9/tempfile.py", line 461, in __del__ 06:27:51 self.close() 06:27:51 File "/usr/lib64/python3.9/tempfile.py", line 457, in close 06:27:51 unlink(self.name) 06:27:51 FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmp15yacxcm.foo' 06:27:51 warnings.warn(pytest.PytestUnraisableExceptionWarning(msg)) 06:27:51 OmeroPy/test/integration/scriptstest/test_script_utils.py: 200 warnings 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1131: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. 06:27:51 converted_row = row.tostring() 06:27:51 OmeroPy/test/integration/tablestest/test_backwards_compatibility.py: 12 warnings 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/tablestest/test_backwards_compatibility.py:84: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead 06:27:51 return numpy.fromstring(x, count=len(x), dtype=tables.UInt8Atom()) 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testBlankTable 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/tablestest/test_service.py::TestTables::testBlankTable returned object #0 (::omero::model::OriginalFile) 06:27:51 { 06:27:51 _id = object #1 (::omero::RLong) 06:27:51 { 06:27:51 _val = 5014 06:27:51 } 06:27:51 _details = object #2 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = object #3 (::omero::model::Experimenter) 06:27:51 { 06:27:51 _id = object #4 (::omero::RLong) 06:27:51 { 06:27:51 _val = 3847 06:27:51 } 06:27:51 _details = object #5 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = <nil> 06:27:51 _group = <nil> 06:27:51 _creationEvent = <nil> 06:27:51 _updateEvent = <nil> 06:27:51 _permissions = object #6 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = True 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 3cc57eaa-dc1d-4608-a74e-47ea4e5aae8f 06:27:51 key = omero.session.uuid 06:27:51 value = 294224bd-db09-411a-93f2-3c3793f23815 06:27:51 } 06:27:51 _event = object #7 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 8772 06:27:51 sessionUuid = ********* 06:27:51 userId = 3847 06:27:51 userName = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 2824 06:27:51 groupName = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = 80630 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 2824 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #8 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _version = object #9 (::omero::RInt) 06:27:51 { 06:27:51 _val = 0 06:27:51 } 06:27:51 _groupExperimenterMapSeq = 06:27:51 { 06:27:51 } 06:27:51 _groupExperimenterMapLoaded = False 06:27:51 _omeName = object #10 (::omero::RString) 06:27:51 { 06:27:51 _val = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 } 06:27:51 _firstName = object #11 (::omero::RString) 06:27:51 { 06:27:51 _val = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 } 06:27:51 _middleName = <nil> 06:27:51 _lastName = object #12 (::omero::RString) 06:27:51 { 06:27:51 _val = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 } 06:27:51 _institution = <nil> 06:27:51 _ldap = object #13 (::omero::RBool) 06:27:51 { 06:27:51 _val = False 06:27:51 } 06:27:51 _email = object #14 (::omero::RString) 06:27:51 { 06:27:51 _val = 06:27:51 } 06:27:51 _config = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 } 06:27:51 _group = object #15 (::omero::model::ExperimenterGroup) 06:27:51 { 06:27:51 _id = object #16 (::omero::RLong) 06:27:51 { 06:27:51 _val = 2824 06:27:51 } 06:27:51 _details = object #17 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = <nil> 06:27:51 _group = <nil> 06:27:51 _creationEvent = <nil> 06:27:51 _updateEvent = <nil> 06:27:51 _permissions = object #18 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = True 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 3cc57eaa-dc1d-4608-a74e-47ea4e5aae8f 06:27:51 key = omero.session.uuid 06:27:51 value = 294224bd-db09-411a-93f2-3c3793f23815 06:27:51 } 06:27:51 _event = object #19 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 8772 06:27:51 sessionUuid = ********* 06:27:51 userId = 3847 06:27:51 userName = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 2824 06:27:51 groupName = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = 80630 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 2824 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #20 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _version = <object #9> 06:27:51 _name = object #21 (::omero::RString) 06:27:51 { 06:27:51 _val = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 } 06:27:51 _ldap = <object #13> 06:27:51 _groupExperimenterMapSeq = 06:27:51 { 06:27:51 } 06:27:51 _groupExperimenterMapLoaded = False 06:27:51 _config = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _description = <nil> 06:27:51 } 06:27:51 _creationEvent = object #22 (::omero::model::Event) 06:27:51 { 06:27:51 _id = object #23 (::omero::RLong) 06:27:51 { 06:27:51 _val = 80630 06:27:51 } 06:27:51 _details = object #24 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = <nil> 06:27:51 _group = <nil> 06:27:51 _creationEvent = <nil> 06:27:51 _updateEvent = <nil> 06:27:51 _permissions = object #25 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = True 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 3cc57eaa-dc1d-4608-a74e-47ea4e5aae8f 06:27:51 key = omero.session.uuid 06:27:51 value = 294224bd-db09-411a-93f2-3c3793f23815 06:27:51 } 06:27:51 _event = object #26 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 8772 06:27:51 sessionUuid = ********* 06:27:51 userId = 3847 06:27:51 userName = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 2824 06:27:51 groupName = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = 80630 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 2824 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #27 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _status = <nil> 06:27:51 _time = object #28 (::omero::RTime) 06:27:51 { 06:27:51 _val = 1729749305596 06:27:51 } 06:27:51 _experimenter = <object #3> 06:27:51 _experimenterGroup = <object #15> 06:27:51 _type = object #29 (::omero::model::EventType) 06:27:51 { 06:27:51 _id = object #30 (::omero::RLong) 06:27:51 { 06:27:51 _val = 4 06:27:51 } 06:27:51 _details = object #31 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = <nil> 06:27:51 _group = <nil> 06:27:51 _creationEvent = <nil> 06:27:51 _updateEvent = <nil> 06:27:51 _permissions = object #32 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = False 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 3cc57eaa-dc1d-4608-a74e-47ea4e5aae8f 06:27:51 key = omero.session.uuid 06:27:51 value = 294224bd-db09-411a-93f2-3c3793f23815 06:27:51 } 06:27:51 _event = object #33 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 8772 06:27:51 sessionUuid = ********* 06:27:51 userId = 3847 06:27:51 userName = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 2824 06:27:51 groupName = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = 80630 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 2824 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #34 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _value = object #35 (::omero::RString) 06:27:51 { 06:27:51 _val = User 06:27:51 } 06:27:51 } 06:27:51 _containingEvent = <nil> 06:27:51 _logsSeq = 06:27:51 { 06:27:51 } 06:27:51 _logsLoaded = True 06:27:51 _session = object #36 (::omero::model::Session) 06:27:51 { 06:27:51 _id = object #37 (::omero::RLong) 06:27:51 { 06:27:51 _val = 8772 06:27:51 } 06:27:51 _details = object #38 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = <nil> 06:27:51 _group = <nil> 06:27:51 _creationEvent = <nil> 06:27:51 _updateEvent = <nil> 06:27:51 _permissions = object #39 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = False 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 3cc57eaa-dc1d-4608-a74e-47ea4e5aae8f 06:27:51 key = omero.session.uuid 06:27:51 value = 294224bd-db09-411a-93f2-3c3793f23815 06:27:51 } 06:27:51 _event = object #40 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 8772 06:27:51 sessionUuid = ********* 06:27:51 userId = 3847 06:27:51 userName = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 2824 06:27:51 groupName = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = 80630 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 2824 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #41 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _version = <object #9> 06:27:51 _node = object #42 (::omero::model::Node) 06:27:51 { 06:27:51 _id = object #43 (::omero::RLong) 06:27:51 { 06:27:51 _val = 1 06:27:51 } 06:27:51 _details = <nil> 06:27:51 _loaded = False 06:27:51 _version = <nil> 06:27:51 _sessionsSeq = 06:27:51 { 06:27:51 } 06:27:51 _sessionsLoaded = False 06:27:51 _uuid = <nil> 06:27:51 _conn = <nil> 06:27:51 _up = <nil> 06:27:51 _down = <nil> 06:27:51 _scale = <nil> 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 } 06:27:51 _uuid = object #44 (::omero::RString) 06:27:51 { 06:27:51 _val = ******** 06:27:51 } 06:27:51 _owner = <object #3> 06:27:51 _sudoer = <nil> 06:27:51 _timeToIdle = object #45 (::omero::RLong) 06:27:51 { 06:27:51 _val = 600000 06:27:51 } 06:27:51 _timeToLive = object #46 (::omero::RLong) 06:27:51 { 06:27:51 _val = 0 06:27:51 } 06:27:51 _started = object #47 (::omero::RTime) 06:27:51 { 06:27:51 _val = 1729749305546 06:27:51 } 06:27:51 _closed = <nil> 06:27:51 _message = object #48 (::omero::RString) 06:27:51 { 06:27:51 _val = Initial message. 06:27:51 } 06:27:51 _defaultEventType = object #49 (::omero::RString) 06:27:51 { 06:27:51 _val = User 06:27:51 } 06:27:51 _userAgent = object #50 (::omero::RString) 06:27:51 { 06:27:51 _val = OMERO.py.test 06:27:51 } 06:27:51 _userIP = <nil> 06:27:51 _eventsSeq = 06:27:51 { 06:27:51 } 06:27:51 _eventsLoaded = False 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = True 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _updateEvent = <object #22> 06:27:51 _permissions = object #51 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = False 06:27:51 [2] = False 06:27:51 [3] = False 06:27:51 [4] = False 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 3cc57eaa-dc1d-4608-a74e-47ea4e5aae8f 06:27:51 key = omero.session.uuid 06:27:51 value = 294224bd-db09-411a-93f2-3c3793f23815 06:27:51 } 06:27:51 _event = object #52 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 8772 06:27:51 sessionUuid = ********* 06:27:51 userId = 3847 06:27:51 userName = ab798f25-d3b0-4156-886e-fdbee11b3dc2 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 2824 06:27:51 groupName = aaea2363-bca0-4bd0-8f0d-8ec943340202 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = 80630 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 2824 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #53 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _version = <nil> 06:27:51 _pixelsFileMapsSeq = 06:27:51 { 06:27:51 } 06:27:51 _pixelsFileMapsLoaded = True 06:27:51 _pixelsFileMapsCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _path = object #54 (::omero::RString) 06:27:51 { 06:27:51 _val = /test 06:27:51 } 06:27:51 _repo = <nil> 06:27:51 _size = <nil> 06:27:51 _atime = object #55 (::omero::RTime) 06:27:51 { 06:27:51 _val = 1729749305595 06:27:51 } 06:27:51 _mtime = object #56 (::omero::RTime) 06:27:51 { 06:27:51 _val = 1729749305595 06:27:51 } 06:27:51 _ctime = object #57 (::omero::RTime) 06:27:51 { 06:27:51 _val = 1729749305595 06:27:51 } 06:27:51 _hasher = <nil> 06:27:51 _hash = <nil> 06:27:51 _mimetype = object #58 (::omero::RString) 06:27:51 { 06:27:51 _val = OMERO.tables 06:27:51 } 06:27:51 _filesetEntriesSeq = 06:27:51 { 06:27:51 } 06:27:51 _filesetEntriesLoaded = True 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = True 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _name = object #59 (::omero::RString) 06:27:51 { 06:27:51 _val = /test 06:27:51 } 06:27:51 }, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testMask 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testMask 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable 06:27:51 OmeroPy/test/integration/tablestest/test_service.py::TestTables::testAllColumnsSameTable 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/tablestest/test_service.py:54: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead 06:27:51 return numpy.fromstring(x, count=len(x), dtype=tables.UInt8Atom()) 06:27:51 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata 06:27:51 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata 06:27:51 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata 06:27:51 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata 06:27:51 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata 06:27:51 OmeroPy/test/integration/tablestest/test_tables.py::TestTableIntegrity::testAllColumnsAndMetadata 06:27:51 /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/test/integration/tablestest/test_tables.py:55: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead 06:27:51 return numpy.fromstring(x, count=len(x), dtype=tables.UInt8Atom()) 06:27:51 OmeroPy/test/integration/test_isession.py::TestISession::testJoinSession_Helper 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_isession.py::TestISession::testJoinSession_Helper returned '187195e0-35cc-42f6-a6e7-dfc6a92eea78', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_isession.py::TestISession::testSessionWithIP[127.0.0.1] 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_model_SessionI.py:37: DeprecationWarning: Session.userIP is deprecated 06:27:51 warnings.warn(item + " is deprecated", DeprecationWarning) 06:27:51 OmeroPy/test/integration/test_ishare.py::TestIShare::test1201 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_ishare.py::TestIShare::test1201 returned (<omero.clients.BaseClient object at 0x7f0205bd65e0>, 8987, 1729749868553), which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_ishare.py::TestIShare::test_OS_regular_user 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_ishare.py::TestIShare::test_OS_regular_user returned (object #0 (::omero::model::Image) 06:27:51 { 06:27:51 _id = object #1 (::omero::RLong) 06:27:51 { 06:27:51 _val = 6287 06:27:51 } 06:27:51 _details = <nil> 06:27:51 _loaded = False 06:27:51 _version = <nil> 06:27:51 _series = <nil> 06:27:51 _acquisitionDate = <nil> 06:27:51 _archived = <nil> 06:27:51 _partial = <nil> 06:27:51 _format = <nil> 06:27:51 _imagingEnvironment = <nil> 06:27:51 _objectiveSettings = <nil> 06:27:51 _instrument = <nil> 06:27:51 _stageLabel = <nil> 06:27:51 _experiment = <nil> 06:27:51 _pixelsSeq = {} 06:27:51 _pixelsLoaded = False 06:27:51 _wellSamplesSeq = {} 06:27:51 _wellSamplesLoaded = False 06:27:51 _roisSeq = {} 06:27:51 _roisLoaded = False 06:27:51 _datasetLinksSeq = {} 06:27:51 _datasetLinksLoaded = False 06:27:51 _datasetLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _folderLinksSeq = {} 06:27:51 _folderLinksLoaded = False 06:27:51 _folderLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _fileset = <nil> 06:27:51 _annotationLinksSeq = {} 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _name = <nil> 06:27:51 _description = <nil> 06:27:51 }, 9022), which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_reporawfilestore.py::TestRepoRawFileStore::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_reporawfilestore.py::TestRepoRawFileStore::test_dir returned '7dc9c696-7d1f-4a1a-80c1-8dedcc112bcc_4195/588ab604-d342-4612-b6d5-2b397bfc0e40', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestRepository::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestRepository::test_dir returned '0f4c5ef3-1fec-4e23-b27c-7377dcd2800c_4196/9096f5f1-b21b-47c8-8d31-a99752c39060', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestFileExists::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestFileExists::test_dir returned 'a31af40b-6b54-415e-a0c5-ad1c2298204f_4197/b8f8b172-d2cd-4c21-885b-1597a65af41d', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestManagedRepositoryMultiUser::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestManagedRepositoryMultiUser::test_dir returned '725a0a55-da38-4a12-8663-08f84928829a_4198/1863c075-375f-4f57-99c4-5a4add33ab33', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestPythonImporter::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestPythonImporter::test_dir returned '4cffb696-b561-487b-afe3-0cb6092a767e_4210/70c1e38d-bfb8-47de-acef-daf5600a757c', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestRawAccess::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestRawAccess::test_dir returned '71d6cf77-849f-42c7-abfb-92e4abfec114_4215/fa7fa5fd-0652-432d-be3a-0807e2efd089', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestDbSync::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestDbSync::test_dir returned 'f812cfc6-adca-43a8-8365-258078c13047_4216/171d3de9-5891-45f2-b0ba-f0b1af0c0e6c', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestRecursiveDelete::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestRecursiveDelete::test_dir returned '6e8a5a46-d194-49cf-8716-51ff5d8275b2_4217/1428e588-2006-4fd2-bed8-7d895ad08c23', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestDeleteLog::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestDeleteLog::test_dir returned '9fd49165-6c21-4247-bf27-e30a93c70222_4218/3bfb9304-ab5c-4e9e-b5a0-e5a7f594edc9', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestUserTemplate::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestUserTemplate::test_dir returned '6d5396c2-0774-4929-9e9b-61ae2c412836_4219/1ef29036-8dee-467a-acbf-8e24c1237c05', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestFilesetQueries::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestFilesetQueries::test_dir returned 'c40b7891-7815-4fb5-a17a-2aa129670450_4220/6261f7f6-ad70-4b81-b6b8-339be837fb0a', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestOriginalMetadata::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestOriginalMetadata::test_dir returned 'fa661a73-9fdb-4fc6-8614-c65810942b66_4221/75afa949-0f4d-4fdc-a8ca-da4bd08f653d', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_repository.py::TestDeletePerformance::test_dir 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_repository.py::TestDeletePerformance::test_dir returned 'c0c8864a-e46e-4bbb-af9a-73b60a8046f7_4223/e6028bb7-2a73-4ef9-9065-4e31ad0ce1f3', which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_scripts.py::TestScripts::testBasicUsage 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_scripts.py::TestScripts::testBasicUsage returned 3aca1b8a-20a8-4f97-bff8-b7fc921c66e4/7ac0405b-1d0b-49fd-8a28-53b31bf113acomero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_scripts.py::TestScripts::testUpload2562 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but OmeroPy/test/integration/test_scripts.py::TestScripts::testUpload2562 returned (b83246fa-be3c-49bd-8e8e-ce01686844f6/b45446cf-c8ff-43f1-8ac4-1b83ac2466b3omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000, object #0 (::omero::model::OriginalFile) 06:27:51 { 06:27:51 _id = object #1 (::omero::RLong) 06:27:51 { 06:27:51 _val = 5702 06:27:51 } 06:27:51 _details = object #2 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = object #3 (::omero::model::Experimenter) 06:27:51 { 06:27:51 _id = object #4 (::omero::RLong) 06:27:51 { 06:27:51 _val = 0 06:27:51 } 06:27:51 _details = <nil> 06:27:51 _loaded = False 06:27:51 _version = <nil> 06:27:51 _groupExperimenterMapSeq = 06:27:51 { 06:27:51 } 06:27:51 _groupExperimenterMapLoaded = False 06:27:51 _omeName = <nil> 06:27:51 _firstName = <nil> 06:27:51 _middleName = <nil> 06:27:51 _lastName = <nil> 06:27:51 _institution = <nil> 06:27:51 _ldap = <nil> 06:27:51 _email = <nil> 06:27:51 _config = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 } 06:27:51 _group = object #5 (::omero::model::ExperimenterGroup) 06:27:51 { 06:27:51 _id = object #6 (::omero::RLong) 06:27:51 { 06:27:51 _val = 1 06:27:51 } 06:27:51 _details = object #7 (::omero::model::Details) 06:27:51 { 06:27:51 _owner = <nil> 06:27:51 _group = <nil> 06:27:51 _creationEvent = <nil> 06:27:51 _updateEvent = <nil> 06:27:51 _permissions = object #8 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = False 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -52 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 7ac0405b-1d0b-49fd-8a28-53b31bf113ac 06:27:51 key = omero.session.uuid 06:27:51 value = 3aca1b8a-20a8-4f97-bff8-b7fc921c66e4 06:27:51 } 06:27:51 _event = object #9 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 9290 06:27:51 sessionUuid = ********* 06:27:51 userId = 4230 06:27:51 userName = abbc9306-92b6-4bd7-b478-f465a28ea60a 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 3148 06:27:51 groupName = 2e4786af-cac5-484e-99a6-e53b78a45f67 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = -1 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 3148 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #10 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _version = object #11 (::omero::RInt) 06:27:51 { 06:27:51 _val = 0 06:27:51 } 06:27:51 _name = object #12 (::omero::RString) 06:27:51 { 06:27:51 _val = user 06:27:51 } 06:27:51 _ldap = object #13 (::omero::RBool) 06:27:51 { 06:27:51 _val = False 06:27:51 } 06:27:51 _groupExperimenterMapSeq = 06:27:51 { 06:27:51 } 06:27:51 _groupExperimenterMapLoaded = False 06:27:51 _config = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _description = <nil> 06:27:51 } 06:27:51 _creationEvent = object #14 (::omero::model::Event) 06:27:51 { 06:27:51 _id = object #15 (::omero::RLong) 06:27:51 { 06:27:51 _val = 99437 06:27:51 } 06:27:51 _details = <nil> 06:27:51 _loaded = False 06:27:51 _status = <nil> 06:27:51 _time = <nil> 06:27:51 _experimenter = <nil> 06:27:51 _experimenterGroup = <nil> 06:27:51 _type = <nil> 06:27:51 _containingEvent = <nil> 06:27:51 _logsSeq = 06:27:51 { 06:27:51 } 06:27:51 _logsLoaded = False 06:27:51 _session = <nil> 06:27:51 } 06:27:51 _updateEvent = <object #14> 06:27:51 _permissions = object #16 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 [0] = False 06:27:51 [1] = True 06:27:51 [2] = True 06:27:51 [3] = False 06:27:51 [4] = True 06:27:51 [5] = True 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 _externalInfo = <nil> 06:27:51 _call = 06:27:51 { 06:27:51 key = omero.client.uuid 06:27:51 value = 7ac0405b-1d0b-49fd-8a28-53b31bf113ac 06:27:51 key = omero.session.uuid 06:27:51 value = 3aca1b8a-20a8-4f97-bff8-b7fc921c66e4 06:27:51 } 06:27:51 _event = object #17 (::omero::sys::EventContext) 06:27:51 { 06:27:51 shareId = -1 06:27:51 sessionId = 9290 06:27:51 sessionUuid = ********* 06:27:51 userId = 4230 06:27:51 userName = abbc9306-92b6-4bd7-b478-f465a28ea60a 06:27:51 sudoerId = <nil> 06:27:51 sudoerName = <nil> 06:27:51 groupId = 3148 06:27:51 groupName = 2e4786af-cac5-484e-99a6-e53b78a45f67 06:27:51 isAdmin = False 06:27:51 adminPrivileges = 06:27:51 { 06:27:51 } 06:27:51 eventId = -1 06:27:51 eventType = User 06:27:51 memberOfGroups = 06:27:51 { 06:27:51 [0] = 3148 06:27:51 [1] = 1 06:27:51 } 06:27:51 leaderOfGroups = 06:27:51 { 06:27:51 } 06:27:51 groupPermissions = object #18 (::omero::model::Permissions) 06:27:51 { 06:27:51 _restrictions = 06:27:51 { 06:27:51 } 06:27:51 _extendedRestrictions = 06:27:51 { 06:27:51 } 06:27:51 _perm1 = -120 06:27:51 } 06:27:51 } 06:27:51 } 06:27:51 _loaded = True 06:27:51 _version = <object #11> 06:27:51 _pixelsFileMapsSeq = 06:27:51 { 06:27:51 } 06:27:51 _pixelsFileMapsLoaded = False 06:27:51 _pixelsFileMapsCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _path = object #19 (::omero::RString) 06:27:51 { 06:27:51 _val = / 06:27:51 } 06:27:51 _repo = object #20 (::omero::RString) 06:27:51 { 06:27:51 _val = ScriptRepo 06:27:51 } 06:27:51 _size = object #21 (::omero::RLong) 06:27:51 { 06:27:51 _val = 168 06:27:51 } 06:27:51 _atime = <nil> 06:27:51 _mtime = <nil> 06:27:51 _ctime = <nil> 06:27:51 _hasher = object #22 (::omero::model::ChecksumAlgorithm) 06:27:51 { 06:27:51 _id = object #23 (::omero::RLong) 06:27:51 { 06:27:51 _val = 6 06:27:51 } 06:27:51 _details = <nil> 06:27:51 _loaded = False 06:27:51 _value = <nil> 06:27:51 } 06:27:51 _hash = object #24 (::omero::RString) 06:27:51 { 06:27:51 _val = 0232cafa500bc438e2aecf7a78348d70652575a6 06:27:51 } 06:27:51 _mimetype = object #25 (::omero::RString) 06:27:51 { 06:27:51 _val = text/x-python 06:27:51 } 06:27:51 _filesetEntriesSeq = 06:27:51 { 06:27:51 } 06:27:51 _filesetEntriesLoaded = True 06:27:51 _annotationLinksSeq = 06:27:51 { 06:27:51 } 06:27:51 _annotationLinksLoaded = False 06:27:51 _annotationLinksCountPerOwner = 06:27:51 { 06:27:51 } 06:27:51 _name = object #26 (::omero::RString) 06:27:51 { 06:27:51 _val = 124aa599-7496-47b5-99f2-df84ca8870a6.py 06:27:51 } 06:27:51 }), which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_scripts.py::TestScripts::testRunScript 06:27:51 OmeroPy/test/integration/test_scripts.py::TestScripts::testRunScript 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/decorators.py:82: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 06:27:51 log.warn( 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_tickets1000.py::TestTicket1000::test880 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1313: DeprecationWarning: This method is deprecated as of OMERO 5.3.0 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_tickets1000.py::TestTicket1000::test880 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1074: DeprecationWarning: This method is deprecated as of OMERO 5.3.0. Use upload_plane instead 06:27:51 warnings.warn( 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testThumbs 06:27:51 OmeroPy/test/integration/test_tickets1000.py::TestTicket1000::test880 06:27:51 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1259: DeprecationWarning: This method is deprecated as of OMERO 5.3.0. Use reset_rendering_settings 06:27:51 warnings.warn( 06:27:51 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 06:27:51 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/integration/junit-results.xml - 06:27:51 =========================== short test summary info ============================ 06:27:51 FAILED test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade0 - omero.cli.NonZeroReturnCode: assert failed 06:27:51 FAILED test/integration/clitest/test_admin.py::TestAdmin::test_checkupgrade1 - AssertionError: assert 2 == 1 06:27:51 + where 2 = NonZeroReturnCode('assert failed').rv 06:27:51 + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=4>.value 06:27:51 FAILED test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade0 - omero.cli.NonZeroReturnCode: assert failed 06:27:51 FAILED test/integration/clitest/test_admin.py::TestAdminRestrictedAdmin::test_checkupgrade1 - AssertionError: assert 2 == 1 06:27:51 + where 2 = NonZeroReturnCode('assert failed').rv 06:27:51 + where NonZeroReturnCode('assert failed') = <ExceptionInfo NonZeroReturnCode('assert failed') tblen=3>.value 06:27:51 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Image] - Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 recv() returned zero 06:27:51 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Dataset] - Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 recv() returned zero 06:27:51 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Project] - Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 recv() returned zero 06:27:51 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Screen] - Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 recv() returned zero 06:27:51 FAILED test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetObjectsByMapAnnotations[Plate] - Ice.ConnectionLostException: Ice.ConnectionLostException: 06:27:51 recv() returned zero 06:27:51 FAILED test/integration/gatewaytest/test_user.py::TestUser::testSaveAs - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 FAILED test/integration/test_util.py::TestUpgradeCheck::testReal - assert False is True 06:27:51 + where False = isUpgradeNeeded() 06:27:51 + where isUpgradeNeeded = <omero.util.upgrade_check.UpgradeCheck object at 0x7f009c751d60>.isUpgradeNeeded 06:27:51 ERROR test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testClose - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_connection.py::TestConnectionMethods::testTopLevelObjects - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestFindObject::testFindExperimenter - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetAnnotations - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImage - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-True] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[True-False] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-True] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testGetImageLoadPixels[False-False] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_get_objects.py::TestGetObject::testTraversal - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testThumbnail - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testThumbnailSet - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderingModels - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testSplitChannel - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testLinePlots - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testProjections - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testProperties - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testPixelSizeUnits - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testUnitsGetValue - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testChannelWavelengthUnits - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testExposureTimeUnits - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testShortname - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testImageDate - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testSimpleMarshal - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testExport - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_resolution - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderJpegRegion_invalid_resolution - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_image.py::TestImage::testRenderBirdsEyeView_Size - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testReuseRawPixelsStore - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testPlaneInfo - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testPixelsType - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetTile - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlane - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnGetPlane - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnClose - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetPlanesExceptionOnBoth - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_pixels.py::TestPixels::testGetHistogram - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testDefault - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCustomized - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testChannelWindows - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testFloatDefaultMinMax - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testEmissionWave - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testBatchCopy - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGroupBasedPermissions - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetRdefs - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testResetDefaults - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettings - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsInvalid - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testQuantizationSettingsBulk - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testGetChannelsNoRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsNoRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testSetActiveChannelsWithRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[True] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::test_set_active_channels_set_inactive[False] - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testUnregisterService - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testRegisterService - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_rdefs.py::TestRDefs::testCloseRE - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_wrapper.py::TestWrapper::testAllObjectsWrapped - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDatasetWrapper - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 ERROR test/integration/gatewaytest/test_wrapper.py::TestWrapper::testDetailsWrapper - urllib.error.URLError: <urlopen error [Errno 110] Connection timed out> 06:27:51 = 11 failed, 1943 passed, 9 skipped, 36 deselected, 1924 warnings, 62 errors in 15197.33s (4:13:17) = 06:27:54 !! 10/24/24 07:27:53.707 error: 257 communicators not destroyed during global destruction. 06:27:54 Result: 1 06:27:54 06:27:54 BUILD SUCCESSFUL 06:27:54 Total time: 253 minutes 21 seconds 06:27:54 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroFS/build.xml integration -Dtestreports.dir=target/reports/integration 06:27:54 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 06:27:54 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS/build.xml 06:27:54 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS... 06:27:54 06:27:54 python-integration: 06:27:54 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS/target/reports/integration 06:28:01 ============================= test session starts ============================== 06:28:01 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3 06:28:01 cachedir: .pytest_cache 06:28:01 django: version: 4.2.16, settings: omeroweb.settings (from ini) 06:28:01 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools 06:28:01 configfile: pytest.ini 06:28:01 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0 06:28:01 collecting ... collected 1 item 06:28:01 test/integration/test_dbclient.py::TestDropBoxClient::test1 PASSED [100%] 06:28:01 =============================== warnings summary =============================== 06:28:01 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14 06:28:01 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses 06:28:01 import sys, string, imp, os, threading, warnings, datetime 06:28:01 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241 06:28:01 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior. 06:28:01 warnings.warn( 06:28:01 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289 06:28:01 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead. 06:28:01 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning) 06:28:01 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1 06:28:01 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 06:28:01 from pkg_resources import DistributionNotFound, get_distribution 06:28:01 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 06:28:01 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroFS/target/reports/integration/junit-results.xml - 06:28:01 ======================== 1 passed, 4 warnings in 0.21s ========================= 06:28:01 06:28:01 BUILD SUCCESSFUL 06:28:01 Total time: 7 seconds 06:28:01 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroWeb/build.xml integration -Dtestreports.dir=target/reports/integration 06:28:01 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 06:28:01 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb/build.xml 06:28:01 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb... 06:28:02 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb... 06:28:02 06:28:02 python-integration: 06:28:02 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb/target/reports/integration 06:28:02 ============================= test session starts ============================== 06:28:02 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3 06:28:02 cachedir: .pytest_cache 06:28:02 django: version: 4.2.16, settings: omeroweb.settings (from ini) 06:28:02 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools 06:28:02 configfile: pytest.ini 06:28:02 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0 06:28:04 collecting ... collected 430 items 06:28:29 test/integration/test_annotate.py::TestMapAnnotations::test_annotate_map PASSED [ 0%] 06:28:52 test/integration/test_annotate.py::TestTagging::test_create_tag PASSED [ 0%] 06:29:05 test/integration/test_annotate.py::TestTagging::test_annotate_tag PASSED [ 0%] 06:29:29 test/integration/test_annotate.py::TestBatchAnnotate::test_batch_annotate_tag PASSED [ 0%] 06:29:53 test/integration/test_annotate.py::TestFileAnnotations::test_add_fileannotations_form PASSED [ 1%] 06:30:02 test/integration/test_annotate.py::TestFileAnnotations::test_batch_add_fileannotations[1] PASSED [ 1%] 06:30:11 test/integration/test_annotate.py::TestFileAnnotations::test_batch_add_fileannotations[2] PASSED [ 1%] 06:30:35 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Plate] PASSED [ 1%] 06:30:43 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Image] PASSED [ 2%] 06:30:52 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Well] PASSED [ 2%] 06:31:01 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-Channel] PASSED [ 2%] 06:31:10 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method0-foo] PASSED [ 2%] 06:31:18 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Plate] PASSED [ 3%] 06:31:27 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Image] PASSED [ 3%] 06:31:36 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Well] PASSED [ 3%] 06:31:45 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-Channel] PASSED [ 3%] 06:31:54 test/integration/test_api_containers.py::TestContainers::test_create_update_unsupported[method1-foo] PASSED [ 3%] 06:32:03 test/integration/test_api_containers.py::TestContainers::test_delete_unsupported[Plate] PASSED [ 4%] 06:32:11 test/integration/test_api_containers.py::TestContainers::test_delete_unsupported[Image] PASSED [ 4%] 06:32:21 test/integration/test_api_containers.py::TestContainers::test_delete_unsupported[Well] PASSED [ 4%] 06:32:22 test/integration/test_api_containers.py::TestContainers::test_container_crud[Project] PASSED [ 4%] 06:32:23 test/integration/test_api_containers.py::TestContainers::test_container_crud[Dataset] PASSED [ 5%] 06:32:24 test/integration/test_api_containers.py::TestContainers::test_container_crud[Screen] PASSED [ 5%] 06:32:36 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Dataset-True] PASSED [ 5%] 06:32:47 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Dataset-False] PASSED [ 5%] 06:32:59 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Plate-True] PASSED [ 6%] 06:33:10 test/integration/test_api_containers.py::TestContainers::test_datasets_plates[Plate-False] PASSED [ 6%] 06:33:19 test/integration/test_api_containers.py::TestContainers::test_screens PASSED [ 6%] 06:33:28 test/integration/test_api_containers.py::TestContainers::test_screen_plates_update PASSED [ 6%] 06:33:38 test/integration/test_api_containers.py::TestContainers::test_container_tags_update[dtype0] PASSED [ 6%] 06:33:47 test/integration/test_api_containers.py::TestContainers::test_container_tags_update[dtype1] PASSED [ 7%] 06:33:56 test/integration/test_api_containers.py::TestContainers::test_container_tags_update[dtype2] PASSED [ 7%] 06:34:06 test/integration/test_api_containers.py::TestContainers::test_spw_urls PASSED [ 7%] 06:34:16 test/integration/test_api_containers.py::TestContainers::test_spw_parent_urls PASSED [ 7%] 06:34:27 test/integration/test_api_containers.py::TestContainers::test_pdi_urls PASSED [ 8%] 06:34:38 test/integration/test_api_containers.py::TestContainers::test_pdi_parent_urls PASSED [ 8%] 06:34:53 test/integration/test_api_errors.py::TestErrors::test_save_post_no_id PASSED [ 8%] 06:34:53 test/integration/test_api_errors.py::TestErrors::test_save_put_id PASSED [ 8%] 06:34:53 test/integration/test_api_errors.py::TestErrors::test_marshal_type PASSED [ 9%] 06:34:53 test/integration/test_api_errors.py::TestErrors::test_invalid_parameter PASSED [ 9%] 06:34:53 test/integration/test_api_errors.py::TestErrors::test_marshal_validation PASSED [ 9%] 06:35:02 test/integration/test_api_errors.py::TestErrors::test_security_violation PASSED [ 9%] 06:35:11 test/integration/test_api_errors.py::TestErrors::test_validation_exception PASSED [ 10%] 06:35:15 test/integration/test_api_errors.py::TestErrors::test_project_validation PASSED [ 10%] 06:35:39 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method0-Experimenter] PASSED [ 10%] 06:35:48 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method0-ExperimenterGroup] PASSED [ 10%] 06:35:57 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method1-Experimenter] PASSED [ 10%] 06:36:06 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_create_update_unsupported[method1-ExperimenterGroup] PASSED [ 11%] 06:36:15 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_delete_unsupported[Experimenter] PASSED [ 11%] 06:36:24 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_delete_unsupported[ExperimenterGroup] PASSED [ 11%] 06:36:39 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_experimenters_groups PASSED [ 11%] 06:36:49 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_groups_experimenters PASSED [ 12%] 06:36:58 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_filter_groups PASSED [ 12%] 06:37:07 test/integration/test_api_experimenters_groups.py::TestExperimenters::test_filter_experimenters PASSED [ 12%] 06:37:32 test/integration/test_api_images.py::TestImages::test_dataset_images PASSED [ 12%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_versions PASSED [ 13%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_base_url PASSED [ 13%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_base_url_versions_404 PASSED [ 13%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_login_get PASSED [ 13%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_login_csrf PASSED [ 13%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials0] PASSED [ 14%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials1] PASSED [ 14%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials2] PASSED [ 14%] 06:37:47 test/integration/test_api_login.py::TestLogin::test_login_errors[credentials3] PASSED [ 14%] 06:37:57 test/integration/test_api_login.py::TestLogin::test_login_example PASSED [ 15%] 06:38:12 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_not_logged_in PASSED [ 15%] 06:38:21 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_no_results PASSED [ 15%] 06:38:31 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_user PASSED [ 15%] 06:38:43 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_another_user PASSED [ 16%] 06:38:52 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_another_group PASSED [ 16%] 06:39:01 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_all_groups PASSED [ 16%] 06:39:13 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_all_users PASSED [ 16%] 06:39:24 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_pagination PASSED [ 16%] 06:39:36 test/integration/test_api_projects.py::TestProjects::test_marshal_projects_params PASSED [ 17%] 06:39:36 test/integration/test_api_projects.py::TestProjects::test_project_create_read PASSED [ 17%] 06:39:45 test/integration/test_api_projects.py::TestProjects::test_project_create_other_group PASSED [ 17%] 06:39:55 test/integration/test_api_projects.py::TestProjects::test_project_update PASSED [ 17%] 06:40:03 test/integration/test_api_projects.py::TestProjects::test_project_datasets_update[Project] PASSED [ 18%] 06:40:13 test/integration/test_api_projects.py::TestProjects::test_project_datasets_update[Dataset] PASSED [ 18%] 06:40:22 test/integration/test_api_projects.py::TestProjects::test_project_delete PASSED [ 18%] 06:40:46 test/integration/test_api_rois.py::TestContainers::test_image_rois PASSED [ 18%] 06:40:55 test/integration/test_api_rois.py::TestContainers::test_roi_delete PASSED [ 19%] 06:41:04 test/integration/test_api_rois.py::TestContainers::test_shapes PASSED [ 19%] 06:41:30 test/integration/test_api_wells.py::TestWells::test_plate_wells PASSED [ 19%] 06:41:41 test/integration/test_api_wells.py::TestWells::test_plate_index_wells PASSED [ 19%] 06:41:51 test/integration/test_api_wells.py::TestWells::test_well PASSED [ 20%] 06:42:12 test/integration/test_chgrp.py::TestChgrp::test_load_chgrp_groups[user] PASSED [ 20%] 06:42:12 test/integration/test_chgrp.py::TestChgrp::test_load_chgrp_groups[admin] PASSED [ 20%] 06:42:14 test/integration/test_chgrp.py::TestChgrp::test_chgrp_dry_run[user] PASSED [ 20%] 06:42:14 test/integration/test_chgrp.py::TestChgrp::test_chgrp_new_container[user] PASSED [ 20%] 06:42:15 test/integration/test_chgrp.py::TestChgrp::test_chgrp_new_container[admin] PASSED [ 21%] 06:42:16 test/integration/test_chgrp.py::TestChgrp::test_chgrp_old_container[user] PASSED [ 21%] 06:42:17 test/integration/test_chgrp.py::TestChgrp::test_chgrp_old_container[admin] PASSED [ 21%] 06:42:43 test/integration/test_chown.py::TestChown::test_chown_dry_run[admin] PASSED [ 21%] 06:42:43 test/integration/test_config.py::test_flattenProperties PASSED [ 22%] 06:42:48 test/integration/test_config.py::TestConfig::testDefaultConfig PASSED [ 22%] 06:42:51 test/integration/test_config.py::TestConfig::testDefaultConfigConversion PASSED [ 22%] 06:42:54 test/integration/test_config.py::TestConfig::testUpgradeDropdownMenuConfig[foo-colleagues.label] PASSED [ 22%] 06:42:57 test/integration/test_config.py::TestConfig::testUpgradeDropdownMenuConfig[foo-leaders.label] PASSED [ 23%] 06:43:00 test/integration/test_config.py::TestConfig::testUpgradeDropdownMenuConfig[foo-everyone.label] PASSED [ 23%] 06:43:16 test/integration/test_containers.py::TestContainers::test_add_and_rename_container PASSED [ 23%] 06:43:19 test/integration/test_containers.py::TestContainers::test_add_owned_container PASSED [ 23%] 06:43:19 test/integration/test_containers.py::TestContainers::test_paste_move_remove_deletamany_image PASSED [ 23%] 06:43:24 test/integration/test_containers.py::TestContainers::test_edit_share PASSED [ 24%] 06:43:39 test/integration/test_csrf.py::TestCsrf::test_csrf_middleware_enabled PASSED [ 24%] 06:43:39 test/integration/test_csrf.py::TestCsrf::test_forgot_password PASSED [ 24%] 06:43:39 test/integration/test_csrf.py::TestCsrf::test_move_data PASSED [ 24%] 06:43:39 test/integration/test_csrf.py::TestCsrf::test_add_and_remove_comment PASSED [ 25%] 06:43:40 test/integration/test_csrf.py::TestCsrf::test_attach_file PASSED [ 25%] 06:43:40 test/integration/test_csrf.py::TestCsrf::test_edit_channel_names PASSED [ 25%] 06:43:40 test/integration/test_csrf.py::TestCsrf::test_copy_past_rendering_settings PASSED [ 25%] 06:43:40 test/integration/test_csrf.py::TestCsrf::test_reset_rendering_settings PASSED [ 26%] 06:43:40 test/integration/test_csrf.py::TestCsrf::test_apply_owners_rendering_settings PASSED [ 26%] 06:43:42 test/integration/test_csrf.py::TestCsrf::test_ome_tiff_script PASSED [ 26%] 06:43:42 test/integration/test_csrf.py::TestCsrf::test_script PASSED [ 26%] 06:43:42 test/integration/test_csrf.py::TestCsrf::test_myaccount PASSED [ 26%] 06:43:44 test/integration/test_csrf.py::TestCsrf::test_avatar PASSED [ 27%] 06:43:52 test/integration/test_csrf.py::TestCsrf::test_create_group PASSED [ 27%] 06:43:57 test/integration/test_csrf.py::TestCsrf::test_create_user PASSED [ 27%] 06:44:05 test/integration/test_csrf.py::TestCsrf::test_edit_group PASSED [ 27%] 06:44:12 test/integration/test_csrf.py::TestCsrf::test_edit_user PASSED [ 28%] 06:44:19 test/integration/test_csrf.py::TestCsrf::test_edit_group_by_owner PASSED [ 28%] 06:44:22 test/integration/test_csrf.py::TestCsrf::test_change_password PASSED [ 28%] 06:44:26 test/integration/test_csrf.py::TestCsrf::test_su PASSED [ 28%] 06:44:41 test/integration/test_decorators.py::TestShow::test_conn_cleanup PASSED [ 29%] 06:44:56 test/integration/test_download.py::TestDownload::test_spw_download PASSED [ 29%] 06:44:59 test/integration/test_download.py::TestDownload::test_orphaned_image_direct_download PASSED [ 29%] 06:45:03 test/integration/test_download.py::TestDownload::test_orphaned_image_download PASSED [ 29%] 06:45:07 test/integration/test_download.py::TestDownload::test_image_in_dataset_download PASSED [ 30%] 06:45:11 test/integration/test_download.py::TestDownload::test_image_in_dataset_in_project_download PASSED [ 30%] 06:45:11 test/integration/test_download.py::TestDownload::test_well_download PASSED [ 30%] 06:45:15 test/integration/test_download.py::TestDownload::test_attachment_download PASSED [ 30%] 06:45:30 test/integration/test_download.py::TestDownloadAs::test_download_image_as[jpeg] PASSED [ 30%] 06:45:30 test/integration/test_download.py::TestDownloadAs::test_download_image_as[png] PASSED [ 31%] 06:45:32 test/integration/test_download.py::TestDownloadAs::test_download_image_as[tif] PASSED [ 31%] 06:45:32 test/integration/test_download.py::TestDownloadAs::test_download_images_as_zip[jpeg] PASSED [ 31%] 06:45:33 test/integration/test_download.py::TestDownloadAs::test_download_images_as_zip[png] PASSED [ 31%] 06:45:33 test/integration/test_download.py::TestDownloadAs::test_download_images_as_zip[tif] PASSED [ 32%] 06:46:11 test/integration/test_groups_users.py::TestGroupsUsers::test_group_users_menu PASSED [ 32%] 06:46:26 test/integration/test_histogram.py::TestHistogram::test_histogram_bin_count[None] PASSED [ 32%] 06:46:27 test/integration/test_histogram.py::TestHistogram::test_histogram_bin_count[10] PASSED [ 32%] 06:46:45 test/integration/test_history.py::TestHistory::test_history PASSED [ 33%] 06:46:45 test/integration/test_history.py::TestHistory::test_calendar_default PASSED [ 33%] 06:46:45 test/integration/test_history.py::TestHistory::test_calendar_month PASSED [ 33%] 06:47:00 test/integration/test_links.py::TestLinks::test_link_project_datasets PASSED [ 33%] 06:47:01 test/integration/test_links.py::TestLinks::test_link_datasets_images PASSED [ 33%] 06:47:01 test/integration/test_links.py::TestLinks::test_link_unlink_tagset_tags PASSED [ 34%] 06:47:01 test/integration/test_links.py::TestLinks::test_unlink_screen_plate PASSED [ 34%] 06:47:16 test/integration/test_login.py::TestLogin::test_login_errors[credentials0] PASSED [ 34%] 06:47:16 test/integration/test_login.py::TestLogin::test_login_errors[credentials1] PASSED [ 34%] 06:47:16 test/integration/test_login.py::TestLogin::test_login_errors[credentials2] PASSED [ 35%] 06:47:16 test/integration/test_login.py::TestLogin::test_login_errors[credentials3] PASSED [ 35%] 06:47:16 test/integration/test_login.py::TestLogin::test_get_login_page PASSED [ 35%] 06:47:22 test/integration/test_login.py::TestLogin::test_login_redirect[] PASSED [ 35%] 06:47:28 test/integration/test_login.py::TestLogin::test_login_redirect[/webclient/usertags/] PASSED [ 36%] 06:47:35 test/integration/test_login.py::TestLogin::test_login_view PASSED [ 36%] 06:47:54 test/integration/test_marshal.py::TestImgDetail::test_image_detail PASSED [ 36%] 06:48:10 test/integration/test_metadata.py::TestCoreMetadata::test_pixel_size_units PASSED [ 36%] 06:48:10 test/integration/test_metadata.py::TestCoreMetadata::test_none_pixel_size PASSED [ 36%] 06:48:25 test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[True] PASSED [ 37%] 06:48:25 test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[False] PASSED [ 37%] 06:48:26 test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_not_file PASSED [ 37%] 06:48:50 test/integration/test_plategrid.py::TestPlateGrid::test_get_plate_grid_metadata[shrink] PASSED [ 37%] 06:48:59 test/integration/test_plategrid.py::TestPlateGrid::test_get_plate_grid_metadata[trim] PASSED [ 38%] 06:49:08 test/integration/test_plategrid.py::TestPlateGrid::test_get_plate_grid_metadata[expand] PASSED [ 38%] 06:49:17 test/integration/test_plategrid.py::TestPlateGrid::test_well_images PASSED [ 38%] 06:49:20 test/integration/test_plategrid.py::TestPlateGrid::test_instantiation PASSED [ 38%] 06:49:23 test/integration/test_plategrid.py::TestPlateGrid::test_metadata_grid_size PASSED [ 39%] 06:49:26 test/integration/test_plategrid.py::TestPlateGrid::test_metadata_thumbnail_url PASSED [ 39%] 06:49:29 test/integration/test_plategrid.py::TestPlateGrid::test_full_grid PASSED [ 39%] 06:49:32 test/integration/test_plategrid.py::TestPlateGrid::test_acquisition_date PASSED [ 39%] 06:49:35 test/integration/test_plategrid.py::TestPlateGrid::test_creation_date PASSED [ 40%] 06:49:38 test/integration/test_plategrid.py::TestPlateGrid::test_description PASSED [ 40%] 06:49:48 test/integration/test_plategrid.py::TestScreenPlateTables::test_get_plate_table PASSED [ 40%] 06:50:04 test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_image PASSED [ 40%] 06:50:06 test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url PASSED [ 40%] 06:50:06 test/integration/test_rendering.py::TestRendering::test_all_rendering_defs PASSED [ 41%] 06:50:25 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_incomplete_request PASSED [ 41%] 06:50:28 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_malformed_tile_argument PASSED [ 41%] 06:50:31 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_malformed_region_argument PASSED [ 41%] 06:50:39 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params PASSED [ 42%] 06:50:42 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_large_image PASSED [ 42%] 06:50:45 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_negative_resolution PASSED [ 42%] 06:50:49 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_invalid_resolution PASSED [ 42%] 06:51:01 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_tile_params_big_image PASSED [ 43%] 06:51:08 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_region_params PASSED [ 43%] 06:51:22 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_region_params_big_image PASSED [ 43%] 06:51:33 test/integration/test_rendering.py::TestRenderImageRegion::test_render_birds_eye_view_big_image PASSED [ 43%] 06:51:45 test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_big_image_resolution PASSED [ 43%] 06:52:04 test/integration/test_scripts.py::TestScripts::test_script_ui_defaults PASSED [ 44%] 06:52:09 test/integration/test_scripts.py::TestScripts::test_script_inputs_outputs[inputs0] PASSED [ 44%] 06:52:13 test/integration/test_scripts.py::TestScripts::test_script_inputs_outputs[inputs1] PASSED [ 44%] 06:52:18 test/integration/test_scripts.py::TestScripts::test_script_inputs_outputs[inputs2] PASSED [ 44%] 06:52:35 test/integration/test_scripts.py::TestFigureScripts::test_figure_script_dialog[SplitView] PASSED [ 45%] 06:52:35 test/integration/test_scripts.py::TestFigureScripts::test_figure_script_dialog[Thumbnail] PASSED [ 45%] 06:52:36 test/integration/test_scripts.py::TestFigureScripts::test_figure_script_dialog[MakeMovie] PASSED [ 45%] 06:52:52 test/integration/test_show.py::TestShow::test_empty_path PASSED [ 45%] 06:52:52 test/integration/test_show.py::TestShow::test_project_legacy_path PASSED [ 46%] 06:52:52 test/integration/test_show.py::TestShow::test_projects_legacy_show PASSED [ 46%] 06:52:52 test/integration/test_show.py::TestShow::test_project_dataset_legacy_path PASSED [ 46%] 06:52:52 test/integration/test_show.py::TestShow::test_project_dataset_image_legacy_path PASSED [ 46%] 06:52:52 test/integration/test_show.py::TestShow::test_tag_redirect[1] PASSED [ 46%] 06:52:52 test/integration/test_show.py::TestShow::test_tag_redirect[2] PASSED [ 47%] 06:52:52 test/integration/test_show.py::TestShow::test_tagset_redirect[1] PASSED [ 47%] 06:52:52 test/integration/test_show.py::TestShow::test_tagset_redirect[2] PASSED [ 47%] 06:52:52 test/integration/test_show.py::TestShow::test_tag_legacy_path[1] PASSED [ 47%] 06:52:52 test/integration/test_show.py::TestShow::test_tag_legacy_path[2] PASSED [ 48%] 06:52:52 test/integration/test_show.py::TestShow::test_tagset_tag_legacy_path PASSED [ 48%] 06:52:52 test/integration/test_show.py::TestShow::test_image_legacy_path PASSED [ 48%] 06:52:52 test/integration/test_show.py::TestShow::test_screen_legacy_path PASSED [ 48%] 06:52:52 test/integration/test_show.py::TestShow::test_screen_plate_legacy_path PASSED [ 49%] 06:52:52 test/integration/test_show.py::TestShow::test_screen_plate_well_show PASSED [ 49%] 06:52:52 test/integration/test_show.py::TestShow::test_screen_plate_run_well_show[0] PASSED [ 49%] 06:52:52 test/integration/test_show.py::TestShow::test_screen_plate_run_well_show[1] PASSED [ 49%] 06:52:53 test/integration/test_show.py::TestShow::test_project_dataset_image_show PASSED [ 50%] 06:52:53 test/integration/test_show.py::TestShow::test_project_dataset_image_roi_show PASSED [ 50%] 06:52:53 test/integration/test_show.py::TestShow::test_project_by_id PASSED [ 50%] 06:52:53 test/integration/test_show.py::TestShow::test_project_by_name PASSED [ 50%] 06:52:53 test/integration/test_show.py::TestShow::test_tag_by_value[1] PASSED [ 50%] 06:52:53 test/integration/test_show.py::TestShow::test_tag_by_value[2] PASSED [ 51%] 06:52:53 test/integration/test_show.py::TestShow::test_tagset_tag_by_id PASSED [ 51%] 06:52:53 test/integration/test_show.py::TestShow::test_multiple_well_by_id[plate.name=%(plate_name)s|well.name=%(well_name)s-A10] PASSED [ 51%] 06:52:53 test/integration/test_show.py::TestShow::test_multiple_well_by_id[plate.name=%(plate_name)s|well.name=%(well_name)s-1J] PASSED [ 51%] 06:52:53 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[plate.name=%(plate_name)s|well.name=%(well_name)s-A10] PASSED [ 52%] 06:52:53 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[plate.name=%(plate_name)s|well.name=%(well_name)s-1J] PASSED [ 52%] 06:52:53 test/integration/test_show.py::TestShow::test_multiple_well_by_id[run=%(plate_acquisition_id)s|well.name=%(well_name)s-A10] PASSED [ 52%] 06:52:53 test/integration/test_show.py::TestShow::test_multiple_well_by_id[run=%(plate_acquisition_id)s|well.name=%(well_name)s-1J] PASSED [ 52%] 06:52:53 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[run=%(plate_acquisition_id)s|well.name=%(well_name)s-A10] PASSED [ 53%] 06:52:53 test/integration/test_show.py::TestShow::test_screen_plate_run_well_by_name[run=%(plate_acquisition_id)s|well.name=%(well_name)s-1J] PASSED [ 53%] 06:52:53 test/integration/test_show.py::TestShow::test_well_by_name[A10] PASSED [ 53%] 06:52:53 test/integration/test_show.py::TestShow::test_well_by_name[1J] PASSED [ 53%] 06:52:53 test/integration/test_show.py::TestShow::test_screen_plate_run_illegal_run PASSED [ 53%] 06:52:53 test/integration/test_show.py::TestShow::test_path_to_no_objects PASSED [ 54%] 06:52:54 test/integration/test_show.py::TestShow::test_project_dataset_image PASSED [ 54%] 06:52:54 test/integration/test_show.py::TestShow::test_project_dataset_images_pagination PASSED [ 54%] 06:52:54 test/integration/test_show.py::TestShow::test_orphaned_pagination PASSED [ 54%] 06:52:54 test/integration/test_show.py::TestShow::test_get_image_ids_dataset PASSED [ 55%] 06:52:54 test/integration/test_show.py::TestShow::test_image PASSED [ 55%] 06:52:54 test/integration/test_show.py::TestShow::test_roi PASSED [ 55%] 06:52:54 test/integration/test_show.py::TestShow::test_shape PASSED [ 55%] 06:52:54 test/integration/test_show.py::TestShow::test_well_image_shape PASSED [ 56%] 06:52:54 test/integration/test_show.py::TestShow::test_image_orphan PASSED [ 56%] 06:52:54 test/integration/test_show.py::TestShow::test_image_multi_link PASSED [ 56%] 06:52:54 test/integration/test_show.py::TestShow::test_image_multi_link_restrict_dataset PASSED [ 56%] 06:52:54 test/integration/test_show.py::TestShow::test_image_multi_link_restrict_dataset_project PASSED [ 56%] 06:52:54 test/integration/test_show.py::TestShow::test_image_multi_link_restrict_project PASSED [ 57%] 06:52:54 test/integration/test_show.py::TestShow::test_dataset PASSED [ 57%] 06:52:54 test/integration/test_show.py::TestShow::test_dataset_multi_link PASSED [ 57%] 06:52:54 test/integration/test_show.py::TestShow::test_dataset_multi_link_restrict_project PASSED [ 57%] 06:52:54 test/integration/test_show.py::TestShow::test_dataset_orphan PASSED [ 58%] 06:52:54 test/integration/test_show.py::TestShow::test_project PASSED [ 58%] 06:52:54 test/integration/test_show.py::TestShow::test_acquisition PASSED [ 58%] 06:52:55 test/integration/test_show.py::TestShow::test_acquisition_restrict_plate PASSED [ 58%] 06:52:55 test/integration/test_show.py::TestShow::test_acquisition_restrict_screen PASSED [ 59%] 06:52:55 test/integration/test_show.py::TestShow::test_acquisition_restrict_plate_screen PASSED [ 59%] 06:52:55 test/integration/test_show.py::TestShow::test_well PASSED [ 59%] 06:52:55 test/integration/test_show.py::TestShow::test_well_multi PASSED [ 59%] 06:52:55 test/integration/test_show.py::TestShow::test_well_image PASSED [ 60%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_multi PASSED [ 60%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_plate_multi PASSED [ 60%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_screen_multi PASSED [ 60%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_plate_multi PASSED [ 60%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_screen_multi PASSED [ 61%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_acquisition_plate_screen_multi PASSED [ 61%] 06:52:55 test/integration/test_show.py::TestShow::test_well_restrict_plate_screen_multi PASSED [ 61%] 06:52:55 test/integration/test_show.py::TestShow::test_plate PASSED [ 61%] 06:52:55 test/integration/test_show.py::TestShow::test_plate_restrict_screen PASSED [ 62%] 06:52:55 test/integration/test_show.py::TestShow::test_screen PASSED [ 62%] 06:52:58 test/integration/test_simple.py::TestSimple::testCurrentUser PASSED [ 62%] 06:53:02 test/integration/test_simple.py::TestSimple::testImport PASSED [ 62%] 06:53:28 test/integration/test_table.py::TestOmeroTables::test_table_html PASSED [ 63%] 06:53:38 test/integration/test_table.py::TestOmeroTables::test_table_pagination PASSED [ 63%] 06:53:48 test/integration/test_table.py::TestOmeroTables::test_table_query PASSED [ 63%] 06:53:57 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result0] PASSED [ 63%] 06:54:07 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result1] PASSED [ 63%] 06:54:16 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result2] PASSED [ 64%] 06:54:25 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result3] PASSED [ 64%] 06:54:35 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result4] PASSED [ 64%] 06:54:45 test/integration/test_table.py::TestOmeroTables::test_table_bitmask[query_result5] PASSED [ 64%] 06:54:54 test/integration/test_table.py::TestOmeroTables::test_table_metadata PASSED [ 65%] 06:55:03 test/integration/test_table.py::TestOmeroTables::test_table_get_where_list[query_result0] PASSED [ 65%] 06:55:13 test/integration/test_table.py::TestOmeroTables::test_table_get_where_list[query_result1] PASSED [ 65%] 06:55:22 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice[query_result0] PASSED [ 65%] 06:55:32 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice[query_result1] PASSED [ 66%] 06:55:41 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice[query_result2] PASSED [ 66%] 06:55:50 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity0] PASSED [ 66%] 06:56:00 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity1] PASSED [ 66%] 06:56:09 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity2] PASSED [ 66%] 06:56:18 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity3] PASSED [ 67%] 06:56:28 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity4] PASSED [ 67%] 06:56:37 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity5] PASSED [ 67%] 06:56:46 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity6] PASSED [ 67%] 06:56:55 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity7] PASSED [ 68%] 06:57:04 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity8] PASSED [ 68%] 06:57:14 test/integration/test_table.py::TestOmeroTables::test_table_perform_slice_errors[query_validity9] PASSED [ 68%] 06:57:29 test/integration/test_tags.py::TestTags::test_create_tag_and_tagset PASSED [ 68%] 06:57:29 test/integration/test_tags.py::TestTags::test_edit_tag_and_tagset[tagset] PASSED [ 69%] 06:57:29 test/integration/test_tags.py::TestTags::test_edit_tag_and_tagset[tag] PASSED [ 69%] 06:57:29 test/integration/test_tags.py::TestTags::test_add_edit_and_remove_tag PASSED [ 69%] 06:57:45 test/integration/test_tags.py::TestTags::test_add_remove_tags PASSED [ 69%] 06:58:00 test/integration/test_thumbnails.py::TestThumbnails::test_default_thumb_size[None] PASSED [ 70%] 06:58:01 test/integration/test_thumbnails.py::TestThumbnails::test_default_thumb_size[100] PASSED [ 70%] 06:58:01 test/integration/test_thumbnails.py::TestThumbnails::test_base64_thumb[None] PASSED [ 70%] 06:58:01 test/integration/test_thumbnails.py::TestThumbnails::test_base64_thumb[100] PASSED [ 70%] 06:58:02 test/integration/test_thumbnails.py::TestThumbnails::test_base64_thumb_set PASSED [ 70%] 06:58:18 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[0-1] PASSED [ 71%] 06:58:19 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[0-0] PASSED [ 71%] 06:58:19 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[1-1] PASSED [ 71%] 06:58:20 test/integration/test_thumbnails.py::TestRoiThumbnails::test_roi_thumbnail[1-0] PASSED [ 71%] 06:58:31 test/integration/test_tree.py::TestTree::test_marshal_experimenter PASSED [ 72%] 06:58:34 test/integration/test_tree.py::TestTree::test_marshal_projects_no_results PASSED [ 72%] 06:58:37 test/integration/test_tree.py::TestTree::test_marshal_projects_user PASSED [ 72%] 06:58:42 test/integration/test_tree.py::TestTree::test_marshal_projects_another_user PASSED [ 72%] 06:58:45 test/integration/test_tree.py::TestTree::test_marshal_projects_another_group PASSED [ 73%] 06:58:47 test/integration/test_tree.py::TestTree::test_marshal_projects_all_groups PASSED [ 73%] 06:58:53 test/integration/test_tree.py::TestTree::test_marshal_projects_all_users PASSED [ 73%] 06:58:58 test/integration/test_tree.py::TestTree::test_marshal_projects_all_groups_all_users PASSED [ 73%] 06:59:01 test/integration/test_tree.py::TestTree::test_marshal_datasets_no_results PASSED [ 73%] 06:59:04 test/integration/test_tree.py::TestTree::test_marshal_datasets_user PASSED [ 74%] 06:59:09 test/integration/test_tree.py::TestTree::test_marshal_datasets_another_user PASSED [ 74%] 06:59:12 test/integration/test_tree.py::TestTree::test_marshal_datasets_another_group PASSED [ 74%] 06:59:15 test/integration/test_tree.py::TestTree::test_marshal_datasets_all_groups PASSED [ 74%] 06:59:21 test/integration/test_tree.py::TestTree::test_marshal_datasets_all_users PASSED [ 75%] 06:59:26 test/integration/test_tree.py::TestTree::test_marshal_datasets_all_groups_all_users PASSED [ 75%] 06:59:29 test/integration/test_tree.py::TestTree::test_marshal_datasets_project PASSED [ 75%] 06:59:35 test/integration/test_tree.py::TestTree::test_marshal_datasets_project_crosslink PASSED [ 75%] 06:59:38 test/integration/test_tree.py::TestTree::test_marshal_images_no_results PASSED [ 76%] 06:59:41 test/integration/test_tree.py::TestTree::test_marshal_images_user PASSED [ 76%] 06:59:45 test/integration/test_tree.py::TestTree::test_marshal_images_user_pixels PASSED [ 76%] 06:59:48 test/integration/test_tree.py::TestTree::test_marshal_images_thumb_version[thumb0] PASSED [ 76%] 06:59:51 test/integration/test_tree.py::TestTree::test_marshal_images_thumb_version[thumb1] PASSED [ 76%] 06:59:57 test/integration/test_tree.py::TestTree::test_marshal_images_another_user PASSED [ 77%] 07:00:00 test/integration/test_tree.py::TestTree::test_marshal_images_another_group PASSED [ 77%] 07:00:03 test/integration/test_tree.py::TestTree::test_marshal_images_all_groups PASSED [ 77%] 07:00:09 test/integration/test_tree.py::TestTree::test_marshal_images_all_users PASSED [ 77%] 07:00:15 test/integration/test_tree.py::TestTree::test_marshal_images_all_groups_all_users PASSED [ 78%] 07:00:18 test/integration/test_tree.py::TestTree::test_marshal_images_dataset PASSED [ 78%] 07:00:21 test/integration/test_tree.py::TestTree::test_marshal_images_dataset_no_pixels PASSED [ 78%] 07:00:24 test/integration/test_tree.py::TestTree::test_marshal_images_dataset_date PASSED [ 78%] 07:00:30 test/integration/test_tree.py::TestTree::test_marshal_images_dataset_crosslink PASSED [ 79%] 07:00:36 test/integration/test_tree.py::TestTree::test_marshal_images_share PASSED [ 79%] 07:00:39 test/integration/test_tree.py::TestTree::test_marshal_screens_no_results PASSED [ 79%] 07:00:42 test/integration/test_tree.py::TestTree::test_marshal_screens_user PASSED [ 79%] 07:00:48 test/integration/test_tree.py::TestTree::test_marshal_screens_another_user PASSED [ 80%] 07:00:51 test/integration/test_tree.py::TestTree::test_marshal_screens_another_group PASSED [ 80%] 07:00:54 test/integration/test_tree.py::TestTree::test_marshal_screens_all_groups PASSED [ 80%] 07:01:00 test/integration/test_tree.py::TestTree::test_marshal_screens_all_users PASSED [ 80%] 07:01:05 test/integration/test_tree.py::TestTree::test_marshal_screens_all_groups_all_users PASSED [ 80%] 07:01:08 test/integration/test_tree.py::TestTree::test_marshal_plates_no_results PASSED [ 81%] 07:01:11 test/integration/test_tree.py::TestTree::test_marshal_plates_user PASSED [ 81%] 07:01:17 test/integration/test_tree.py::TestTree::test_marshal_plates_another_user PASSED [ 81%] 07:01:20 test/integration/test_tree.py::TestTree::test_marshal_plates_another_group PASSED [ 81%] 07:01:23 test/integration/test_tree.py::TestTree::test_marshal_plates_all_groups PASSED [ 82%] 07:01:29 test/integration/test_tree.py::TestTree::test_marshal_plates_all_users PASSED [ 82%] 07:01:35 test/integration/test_tree.py::TestTree::test_marshal_plates_all_groups_all_users PASSED [ 82%] 07:01:37 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_no_results PASSED [ 82%] 07:01:40 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_user PASSED [ 83%] 07:01:46 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_another_user PASSED [ 83%] 07:01:49 test/integration/test_tree.py::TestTree::test_marshal_plate_acquisitions_another_group PASSED [ 83%] 07:01:52 test/integration/test_tree.py::TestTree::test_marshal_orphaned_no_results PASSED [ 83%] 07:01:55 test/integration/test_tree.py::TestTree::test_marshal_orphaned PASSED [ 83%] 07:02:01 test/integration/test_tree.py::TestTree::test_marshal_orphaned_another_user PASSED [ 84%] 07:02:04 test/integration/test_tree.py::TestTree::test_marshal_orphaned_another_group PASSED [ 84%] 07:02:07 test/integration/test_tree.py::TestTree::test_marshal_orphaned_all_groups PASSED [ 84%] 07:02:10 test/integration/test_tree.py::TestTree::test_marshal_tags_no_results PASSED [ 84%] 07:02:16 test/integration/test_tree.py::TestTree::test_marshal_tags_user PASSED [ 85%] 07:02:22 test/integration/test_tree.py::TestTree::test_marshal_tags_another_user PASSED [ 85%] 07:02:25 test/integration/test_tree.py::TestTree::test_marshal_tags_another_group PASSED [ 85%] 07:02:31 test/integration/test_tree.py::TestTree::test_marshal_tags_all_groups PASSED [ 85%] 07:02:37 test/integration/test_tree.py::TestTree::test_marshal_tags_all_users PASSED [ 86%] 07:02:43 test/integration/test_tree.py::TestTree::test_marshal_tags_all_groups_all_users PASSED [ 86%] 07:02:49 test/integration/test_tree.py::TestTree::test_marshal_tags_orphaned PASSED [ 86%] 07:02:55 test/integration/test_tree.py::TestTree::test_marshal_tags_tagset PASSED [ 86%] 07:02:58 test/integration/test_tree.py::TestTree::test_marshal_tagged_no_results PASSED [ 86%] 07:03:04 test/integration/test_tree.py::TestTree::test_marshal_tagged_user PASSED [ 87%] 07:03:10 test/integration/test_tree.py::TestTree::test_marshal_tagged_perms PASSED [ 87%] 07:03:13 test/integration/test_tree.py::TestTree::test_marshal_tagged_image_pixels PASSED [ 87%] 07:03:19 test/integration/test_tree.py::TestTree::test_marshal_shares_user PASSED [ 87%] 07:03:25 test/integration/test_tree.py::TestTree::test_marshal_shares_another_user PASSED [ 88%] 07:03:31 test/integration/test_tree.py::TestTree::test_marshal_shares_user_owned PASSED [ 88%] 07:03:36 test/integration/test_tree.py::TestTree::test_marshal_shares_another_user_owned PASSED [ 88%] 07:03:42 test/integration/test_tree.py::TestTree::test_marshal_discussions_user PASSED [ 88%] 07:03:48 test/integration/test_tree.py::TestTree::test_marshal_discussions_another_user PASSED [ 89%] 07:03:53 test/integration/test_tree.py::TestTree::test_marshal_discussions_user_owned PASSED [ 89%] 07:03:59 test/integration/test_tree.py::TestTree::test_marshal_discussions_another_user_owned PASSED [ 89%] 07:04:07 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_single_tag PASSED [ 89%] 07:04:13 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_single_tag_userB PASSED [ 90%] 07:04:18 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_twin_tags_userA_userB PASSED [ 90%] 07:04:24 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_twin_tags_projects PASSED [ 90%] 07:04:30 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_tags_comments_project PASSED [ 90%] 07:04:33 test/integration/test_tree_annotations.py::TestTreeAnnotations::test_filter_by_namespace PASSED [ 90%] 07:05:01 test/integration/test_webadmin.py::TestUserSettings::test_user_settings_page PASSED [ 91%] 07:05:10 test/integration/test_webadmin.py::TestUserSettings::test_edit_settings PASSED [ 91%] 07:05:31 test/integration/test_webadmin.py::TestExperimenters::test_create_experimenter_roles[user] PASSED [ 91%] 07:05:37 test/integration/test_webadmin.py::TestExperimenters::test_create_experimenter_roles[restricted_administrator] PASSED [ 91%] 07:05:41 test/integration/test_webadmin.py::TestExperimenters::test_create_experimenter_roles[administrator] PASSED [ 92%] 07:05:47 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field0] PASSED [ 92%] 07:05:52 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field1] PASSED [ 92%] 07:05:59 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field2] PASSED [ 92%] 07:06:04 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field3] PASSED [ 93%] 07:06:11 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field4] PASSED [ 93%] 07:06:17 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field5] PASSED [ 93%] 07:06:23 test/integration/test_webadmin.py::TestExperimenters::test_required_fields[required_field6] PASSED [ 93%] 07:06:29 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege0] PASSED [ 93%] 07:06:34 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege1] PASSED [ 94%] 07:06:38 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege2] PASSED [ 94%] 07:06:43 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege3] PASSED [ 94%] 07:06:48 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege4] PASSED [ 94%] 07:06:54 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege5] PASSED [ 95%] 07:06:59 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege6] PASSED [ 95%] 07:07:03 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege7] PASSED [ 95%] 07:07:08 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege8] PASSED [ 95%] 07:07:13 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin[privilege9] PASSED [ 96%] 07:07:28 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges0] PASSED [ 96%] 07:07:42 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges1] PASSED [ 96%] 07:07:57 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges2] PASSED [ 96%] 07:08:11 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges3] PASSED [ 96%] 07:08:26 test/integration/test_webadmin.py::TestExperimenters::test_create_restricted_admin_form[privileges4] PASSED [ 97%] 07:08:47 test/integration/test_webadmin.py::TestExperimenters::test_restricted_admin_create_edit_user PASSED [ 97%] 07:09:20 test/integration/test_webadmin.py::TestGroups::test_new_group_form[privileges0] PASSED [ 97%] 07:09:39 test/integration/test_webadmin.py::TestGroups::test_new_group_form[privileges1] PASSED [ 97%] 07:09:58 test/integration/test_webadmin.py::TestGroups::test_new_group_form[privileges2] PASSED [ 98%] 07:10:07 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions0] PASSED [ 98%] 07:10:16 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions1] PASSED [ 98%] 07:10:25 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions2] PASSED [ 98%] 07:10:33 test/integration/test_webadmin.py::TestGroups::test_create_group_permissions[permissions3] PASSED [ 99%] 07:10:40 test/integration/test_webadmin.py::TestGroups::test_required_fields[required_field0] PASSED [ 99%] 07:10:47 test/integration/test_webadmin.py::TestGroups::test_required_fields[required_field1] PASSED [ 99%] 07:11:45 test/integration/test_webadmin.py::TestGroups::test_validation_errors PASSED [ 99%] 07:11:58 test/integration/test_webadmin.py::TestGroups::test_save_experimenter PASSED [100%] 07:11:58 =============================== warnings summary =============================== 07:11:58 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses 07:11:58 import sys, string, imp, os, threading, warnings, datetime 07:11:58 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior. 07:11:58 warnings.warn( 07:11:58 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead. 07:11:58 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning) 07:11:58 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 07:11:58 from pkg_resources import DistributionNotFound, get_distribution 07:11:58 OmeroWeb/test/integration/test_annotate.py: 69 warnings 07:11:58 OmeroWeb/test/integration/test_api_containers.py: 177 warnings 07:11:58 OmeroWeb/test/integration/test_api_errors.py: 19 warnings 07:11:58 OmeroWeb/test/integration/test_api_experimenters_groups.py: 57 warnings 07:11:58 OmeroWeb/test/integration/test_api_images.py: 13 warnings 07:11:58 OmeroWeb/test/integration/test_api_login.py: 8 warnings 07:11:58 OmeroWeb/test/integration/test_api_projects.py: 87 warnings 07:11:58 OmeroWeb/test/integration/test_api_rois.py: 25 warnings 07:11:58 OmeroWeb/test/integration/test_api_wells.py: 20 warnings 07:11:58 OmeroWeb/test/integration/test_chgrp.py: 43 warnings 07:11:58 OmeroWeb/test/integration/test_chown.py: 16 warnings 07:11:58 OmeroWeb/test/integration/test_config.py: 5 warnings 07:11:58 OmeroWeb/test/integration/test_containers.py: 19 warnings 07:11:58 OmeroWeb/test/integration/test_csrf.py: 38 warnings 07:11:58 OmeroWeb/test/integration/test_decorators.py: 5 warnings 07:11:58 OmeroWeb/test/integration/test_download.py: 28 warnings 07:11:58 OmeroWeb/test/integration/test_groups_users.py: 10 warnings 07:11:58 OmeroWeb/test/integration/test_histogram.py: 7 warnings 07:11:58 OmeroWeb/test/integration/test_history.py: 12 warnings 07:11:58 OmeroWeb/test/integration/test_links.py: 20 warnings 07:11:58 OmeroWeb/test/integration/test_login.py: 13 warnings 07:11:58 OmeroWeb/test/integration/test_marshal.py: 6 warnings 07:11:58 OmeroWeb/test/integration/test_metadata.py: 16 warnings 07:11:58 OmeroWeb/test/integration/test_plategrid.py: 29 warnings 07:11:58 OmeroWeb/test/integration/test_rendering.py: 66 warnings 07:11:58 OmeroWeb/test/integration/test_scripts.py: 38 warnings 07:11:58 OmeroWeb/test/integration/test_show.py: 4 warnings 07:11:58 OmeroWeb/test/integration/test_table.py: 110 warnings 07:11:58 OmeroWeb/test/integration/test_tags.py: 26 warnings 07:11:58 OmeroWeb/test/integration/test_thumbnails.py: 68 warnings 07:11:58 OmeroWeb/test/integration/test_webadmin.py: 104 warnings 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/core/serializers/base.py:22: RemovedInDjango50Warning: PickleSerializer is deprecated due to its security risk. Use JSONSerializer instead. 07:11:58 warnings.warn( 07:11:58 OmeroWeb/test/integration/test_api_containers.py: 67 warnings 07:11:58 OmeroWeb/test/integration/test_api_images.py: 6 warnings 07:11:58 OmeroWeb/test/integration/test_api_wells.py: 24 warnings 07:11:58 OmeroWeb/test/integration/test_containers.py: 2 warnings 07:11:58 OmeroWeb/test/integration/test_csrf.py: 5 warnings 07:11:58 OmeroWeb/test/integration/test_download.py: 9 warnings 07:11:58 OmeroWeb/test/integration/test_histogram.py: 2 warnings 07:11:58 OmeroWeb/test/integration/test_metadata.py: 2 warnings 07:11:58 OmeroWeb/test/integration/test_rendering.py: 17 warnings 07:11:58 OmeroWeb/test/integration/test_scripts.py: 30 warnings 07:11:58 OmeroWeb/test/integration/test_thumbnails.py: 23 warnings 07:11:58 OmeroWeb/test/integration/test_tree.py: 20 warnings 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. 07:11:58 converted_plane = byte_swapped_plane.tostring() 07:11:58 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_marshal_type 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_marshal/__init__.py:44: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 07:11:58 logger.warn('Requested unknown decoder %s' % t, exc_info=True) 07:11:58 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_marshal_validation 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_marshal/__init__.py:97: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 07:11:58 logger.warn('Requested unknown decoder %s' % t, exc_info=True) 07:11:58 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_security_violation 07:11:58 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_validation_exception 07:11:58 OmeroWeb/test/integration/test_api_errors.py::TestErrors::test_project_validation 07:11:58 OmeroWeb/test/integration/test_api_projects.py::TestProjects::test_project_delete 07:11:58 OmeroWeb/test/integration/test_api_rois.py::TestContainers::test_roi_delete 07:11:58 OmeroWeb/test/integration/test_links.py::TestLinks::test_link_datasets_images 07:11:58 OmeroWeb/test/integration/test_links.py::TestLinks::test_link_datasets_images 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 07:11:58 logger.warn("%s on %s to <%s> %s(%r, %r)", 07:11:58 OmeroWeb/test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[True] 07:11:58 OmeroWeb/test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_file[False] 07:11:58 OmeroWeb/test/integration/test_metadata.py::TestBulkAnnotations::test_nsbulkannotations_not_file 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omeroweb/testlib/__init__.py:478: DeprecationWarning: This method is deprecated as of OMERO 5.4.0. Use get 07:11:58 warnings.warn( 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRenderImageRegion::test_render_image_region_incomplete_request 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:8856: DeprecationWarning: setActiveChannels() is deprecated in OMERO 5.4.0.Use set_active_channels 07:11:58 warnings.warn("setActiveChannels() is deprecated in OMERO 5.4.0." 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 OmeroWeb/test/integration/test_rendering.py::TestRendering::test_copy_past_rendering_settings_from_url 07:11:58 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:9118: DeprecationWarning: Deprecated in 5.4.0. Use setChannelInverted() 07:11:58 warnings.warn("Deprecated in 5.4.0. Use setChannelInverted()", 07:11:58 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 07:11:58 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroWeb/target/reports/integration/junit-results.xml - 07:11:58 =============== 430 passed, 1389 warnings in 2636.08s (0:43:56) ================ 07:12:00 !! 10/24/24 08:12:00.012 error: 8 communicators not destroyed during global destruction. 07:12:00 07:12:00 BUILD SUCCESSFUL 07:12:00 Total time: 43 minutes 59 seconds 07:12:00 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroPy/build.xml integration -DMARK=broken -Dtestreports.dir=target/reports/broken 07:12:00 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 07:12:01 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/build.xml 07:12:02 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 07:12:02 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy... 07:12:02 07:12:02 python-integration: 07:12:02 Created dir: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/broken 07:12:07 ============================= test session starts ============================== 07:12:07 platform linux -- Python 3.9.18, pytest-8.3.3, pluggy-1.5.0 -- /home/omero/workspace/OMERO-test-integration/.venv3/bin/python3 07:12:07 cachedir: .pytest_cache 07:12:07 django: version: 4.2.16, settings: omeroweb.settings (from ini) 07:12:07 rootdir: /home/omero/workspace/OMERO-test-integration/src/components/tools 07:12:07 configfile: pytest.ini 07:12:07 plugins: xdist-3.6.1, mock-3.14.0, django-4.9.0 07:12:15 collecting ... collected 2061 items / 2025 deselected / 36 selected 07:12:20 test/integration/clitest/test_fs.py::TestFS::testRenameAdminOnly FAILED [ 2%] 07:12:37 test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] FAILED [ 5%] 07:12:49 test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] FAILED [ 8%] 07:12:51 test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory FAILED [ 11%] 07:13:09 test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript FAILED [ 13%] 07:13:14 test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations FAILED [ 16%] 07:13:15 test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead FAILED [ 19%] 07:13:19 test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback FAILED [ 22%] 07:13:34 test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetGroupScripts FAILED [ 25%] 07:13:37 test/integration/tablestest/test_service.py::TestTables::test2098 FAILED [ 27%] 07:13:37 test/integration/tablestest/test_service.py::TestTables::testReadOnlyFile FAILED [ 30%] 07:13:38 test/integration/tablestest/test_service.py::TestTables::testReadEqual FAILED [ 33%] 07:13:38 test/integration/tablestest/test_service.py::TestTables::testReadOutOfRange FAILED [ 36%] 07:13:44 test/integration/test_admin.py::TestAdmin::testChangePasswordWhenUnset FAILED [ 38%] 07:13:46 test/integration/test_admin.py::TestAdmin::test9193 FAILED [ 41%] 07:13:50 test/integration/test_files.py::TestFiles::testUploadDifferentSizeTicket2337 FAILED [ 44%] 07:13:56 test/integration/test_ishare.py::TestIShare::test1172 FAILED [ 47%] 07:14:00 test/integration/test_itimeline.py::TestITimeline::test1225 FAILED [ 50%] 07:14:03 test/integration/test_permissions.py::TestPermissions::test3136 FAILED [ 52%] 07:14:06 test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneExplicit FAILED [ 55%] 07:14:09 test/integration/test_permissions.py::TestPermissions::testSaveWithNegBadLink FAILED [ 58%] 07:14:12 test/integration/test_permissions.py::TestPermissions::testSaveBadLink FAILED [ 61%] 07:14:16 test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroupAndUser FAILED [ 63%] 07:14:19 test/integration/test_rawfilestore.py::TestRFS::testTicket1961Basic FAILED [ 66%] 07:14:19 test/integration/test_rawfilestore.py::TestRFS::testTicket1961WithKillSession FAILED [ 69%] 07:14:19 test/integration/test_rawfilestore.py::TestRFS::testTicket2161Save FAILED [ 72%] 07:14:25 test/integration/test_rawfilestore.py::TestRFS::testNoWrite FAILED [ 75%] 07:14:28 test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWriteNoFile FAILED [ 77%] 07:14:41 test/integration/test_scripts.py::TestScripts::testParseErrorTicket2185 PASSED [ 80%] 07:14:56 test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326 FAILED [ 83%] 07:15:00 test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285 FAILED [ 86%] 07:15:15 test/integration/test_scripts.py::TestScripts::test3527 FAILED [ 88%] 07:15:22 test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx FAILED [ 91%] 07:15:44 test/integration/test_tickets2000.py::TestTickets2000::test1184 FAILED [ 94%] 07:15:57 test/integration/test_tickets4000.py::TestTickets4000::test3138 PASSED [ 97%] 07:16:03 test/integration/test_tickets6000.py::TestTickets6000::test5684 PASSED [100%] 07:16:03 =================================== FAILURES =================================== 07:16:03 __________________________ TestFS.testRenameAdminOnly __________________________ 07:16:03 self = <test.integration.clitest.test_fs.TestFS object at 0x7f7a40b4b2e0> 07:16:03 capsys = <_pytest.capture.CaptureFixture object at 0x7f7a0cfd76d0> 07:16:03 @pytest.mark.broken(reason="fs rename is temporarily disabled") 07:16:03 def testRenameAdminOnly(self, capsys): 07:16:03 """Test fs rename is admin-only""" 07:16:03 self.args += ["rename", "Fileset:1"] 07:16:03 with pytest.raises(NonZeroReturnCode): 07:16:03 self.cli.invoke(self.args, strict=True) 07:16:03 out, err = capsys.readouterr() 07:16:03 > assert err.endswith("SecurityViolation: Admins only!\n") 07:16:03 E AssertionError: assert False 07:16:03 E + where False = <built-in method endswith of str object at 0x7f7a0cfc5260>('SecurityViolation: Admins only!\n') 07:16:03 E + where <built-in method endswith of str object at 0x7f7a0cfc5260> = 'disabled since OMERO 5.4.7 due to Pixels.path bug\n'.endswith 07:16:03 test/integration/clitest/test_fs.py:118: AssertionError 07:16:03 _________ TestImport.testTargetInDifferentGroup[Dataset-test.fake--d] __________ 07:16:03 self = <test.integration.clitest.test_import.TestImport object at 0x7f7a40920940> 07:16:03 container = 'Dataset', filename = 'test.fake', arg = '-d' 07:16:03 tmpdir = local('/tmp/pytest-of-omero/pytest-20/testTargetInDifferentGroup_Dat0') 07:16:03 capfd = <_pytest.capture.CaptureFixture object at 0x7f7a0c9901f0> 07:16:03 @pytest.mark.broken(reason="needs omero.group setting") 07:16:03 @pytest.mark.parametrize("container,filename,arg", target_fixtures) 07:16:03 def testTargetInDifferentGroup(self, container, filename, arg, 07:16:03 tmpdir, capfd): 07:16:03 new_group = self.new_group(experimenters=[self.user]) 07:16:03 self.sf.getAdminService().getEventContext() # Refresh 07:16:03 target = eval("omero.model."+container+"I")() 07:16:03 target.name = rstring('testTargetInDifferentGroup') 07:16:03 target = self.update.saveAndReturnObject( 07:16:03 target, {"omero.group": str(new_group.id.val)}) 07:16:03 assert target.details.group.id.val == new_group.id.val 07:16:03 fakefile = tmpdir.join(filename) 07:16:03 fakefile.write('') 07:16:03 self.args += [str(fakefile)] 07:16:03 self.args += [arg, '%s' % target.id.val] 07:16:03 # Invoke CLI import command and retrieve stdout/stderr 07:16:03 > o, e = self.do_import(capfd) 07:16:03 test/integration/clitest/test_import.py:1216: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 test/integration/clitest/test_import.py:150: in do_import 07:16:03 self.cli.invoke(self.args, strict=True) 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke 07:16:03 self.assertRC() 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <omero.cli.CLI object at 0x7f7a00424d90> 07:16:03 def assertRC(self): 07:16:03 if self.rv != 0: 07:16:03 > raise NonZeroReturnCode(self.rv, "assert failed") 07:16:03 E omero.cli.NonZeroReturnCode: assert failed 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode 07:16:03 ----------------------------- Captured stdout call ----------------------------- 07:16:03 OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOO 07:16:03 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 07:16:03 2024-10-24 08:12:24,802 280 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.7.5-SNAPSHOT 07:16:03 2024-10-24 08:12:24,820 298 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.0.0-SNAPSHOT revision: 62d359b4bc191e66a0e75fbc407c2b440d35be57 date: 24 October 2024 07:16:03 2024-10-24 08:12:24,877 355 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 07:16:03 2024-10-24 08:12:25,431 909 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 07:16:03 2024-10-24 08:12:25,509 987 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 75ms. (78ms total) [0 unknowns] 07:16:03 2024-10-24 08:12:25,551 1029 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:14064 07:16:03 2024-10-24 08:12:26,290 1768 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back 07:16:03 2024-10-24 08:12:26,530 2008 [ main] INFO ome.formats.OMEROMetadataStoreClient - Pinging session every 300s. 07:16:03 2024-10-24 08:12:26,538 2016 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.6.3 07:16:03 2024-10-24 08:12:26,538 2016 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.7.5-SNAPSHOT 07:16:03 2024-10-24 08:12:26,538 2016 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 11.0.24 07:16:03 2024-10-24 08:12:26,538 2016 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux 07:16:03 2024-10-24 08:12:26,538 2016 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64 07:16:03 2024-10-24 08:12:26,538 2016 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 5.14.0-427.40.1.el9_4.x86_64 07:16:03 2024-10-24 08:12:36,837 12315 [ main] ERROR ome.system.UpgradeCheck - Error reading from url: http://upgrade.openmicroscopy.org.uk?version=5.7.5-SNAPSHOT;os.name=Linux;os.arch=amd64;os.version=5.14.0-427.40.1.el9_4.x86_64;java.runtime.version=11.0.24%2B8-LTS;java.vm.vendor=Red+Hat%2C+Inc. "connect timed out" 07:16:03 2024-10-24 08:12:37,073 12551 [ main] INFO ome.formats.importer.ImportConfig - Using import target: Dataset:1346 07:16:03 2024-10-24 08:12:37,084 12562 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Could not load target: ome.formats.importer.targets.ModelImportTarget@136c4438 07:16:03 2024-10-24 08:12:37,084 12562 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Error on import 07:16:03 java.lang.RuntimeException: Failed to load target 07:16:03 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:351) 07:16:03 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:328) 07:16:03 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 07:16:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 07:16:03 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 07:16:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 07:16:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 Caused by: omero.SecurityViolation: null 07:16:03 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) 07:16:03 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) 07:16:03 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) 07:16:03 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490) 07:16:03 at java.base/java.lang.Class.newInstance(Class.java:584) 07:16:03 at IceInternal.BasicStream.createUserException(BasicStream.java:2785) 07:16:03 at IceInternal.BasicStream.access$300(BasicStream.java:14) 07:16:03 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620) 07:16:03 at IceInternal.BasicStream.throwException(BasicStream.java:2291) 07:16:03 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399) 07:16:03 at omero.api.IQueryPrxHelper.end_get(IQueryPrxHelper.java:2000) 07:16:03 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1872) 07:16:03 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1859) 07:16:03 at ome.formats.importer.targets.ModelImportTarget.load(ModelImportTarget.java:219) 07:16:03 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:334) 07:16:03 ... 7 common frames omitted 07:16:03 2024-10-24 08:12:37,086 12564 [2-thread-1] INFO ome.formats.importer.ImportLibrary - Exiting on error 07:16:03 ==> Summary 07:16:03 0 files uploaded, 0 filesets created, 0 images imported, 0 errors in 0:00:00.248 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.util.Resources:__init__.py:652 Starting 07:16:03 INFO omero.util.Resources:__init__.py:669 Halted 07:16:03 _ TestImport.testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] _ 07:16:03 self = <test.integration.clitest.test_import.TestImport object at 0x7f7a40920ac0> 07:16:03 container = 'Screen' 07:16:03 filename = 'SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake' 07:16:03 arg = '-r' 07:16:03 tmpdir = local('/tmp/pytest-of-omero/pytest-20/testTargetInDifferentGroup_Scr0') 07:16:03 capfd = <_pytest.capture.CaptureFixture object at 0x7f7a0c9ab5b0> 07:16:03 @pytest.mark.broken(reason="needs omero.group setting") 07:16:03 @pytest.mark.parametrize("container,filename,arg", target_fixtures) 07:16:03 def testTargetInDifferentGroup(self, container, filename, arg, 07:16:03 tmpdir, capfd): 07:16:03 new_group = self.new_group(experimenters=[self.user]) 07:16:03 self.sf.getAdminService().getEventContext() # Refresh 07:16:03 target = eval("omero.model."+container+"I")() 07:16:03 target.name = rstring('testTargetInDifferentGroup') 07:16:03 target = self.update.saveAndReturnObject( 07:16:03 target, {"omero.group": str(new_group.id.val)}) 07:16:03 assert target.details.group.id.val == new_group.id.val 07:16:03 fakefile = tmpdir.join(filename) 07:16:03 fakefile.write('') 07:16:03 self.args += [str(fakefile)] 07:16:03 self.args += [arg, '%s' % target.id.val] 07:16:03 # Invoke CLI import command and retrieve stdout/stderr 07:16:03 > o, e = self.do_import(capfd) 07:16:03 test/integration/clitest/test_import.py:1216: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 test/integration/clitest/test_import.py:150: in do_import 07:16:03 self.cli.invoke(self.args, strict=True) 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1211: in invoke 07:16:03 self.assertRC() 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <omero.cli.CLI object at 0x7f7a00424d90> 07:16:03 def assertRC(self): 07:16:03 if self.rv != 0: 07:16:03 > raise NonZeroReturnCode(self.rv, "assert failed") 07:16:03 E omero.cli.NonZeroReturnCode: assert failed 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/cli.py:1200: NonZeroReturnCode 07:16:03 ----------------------------- Captured stdout call ----------------------------- 07:16:03 OOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOOO 07:16:03 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 07:16:03 2024-10-24 08:12:37,896 254 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.7.5-SNAPSHOT 07:16:03 2024-10-24 08:12:37,912 270 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.0.0-SNAPSHOT revision: 62d359b4bc191e66a0e75fbc407c2b440d35be57 date: 24 October 2024 07:16:03 2024-10-24 08:12:37,963 321 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 07:16:03 2024-10-24 08:12:38,266 624 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 07:16:03 2024-10-24 08:12:38,584 942 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 315ms. (318ms total) [0 unknowns] 07:16:03 2024-10-24 08:12:38,619 977 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:14064 07:16:03 2024-10-24 08:12:39,049 1407 [ main] INFO ome.formats.OMEROMetadataStoreClient - Insecure connection requested, falling back 07:16:03 2024-10-24 08:12:39,282 1640 [ main] INFO ome.formats.OMEROMetadataStoreClient - Pinging session every 300s. 07:16:03 2024-10-24 08:12:39,289 1647 [ main] INFO ome.formats.OMEROMetadataStoreClient - Server: 5.6.3 07:16:03 2024-10-24 08:12:39,289 1647 [ main] INFO ome.formats.OMEROMetadataStoreClient - Client: 5.7.5-SNAPSHOT 07:16:03 2024-10-24 08:12:39,289 1647 [ main] INFO ome.formats.OMEROMetadataStoreClient - Java Version: 11.0.24 07:16:03 2024-10-24 08:12:39,289 1647 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Name: Linux 07:16:03 2024-10-24 08:12:39,290 1648 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Arch: amd64 07:16:03 2024-10-24 08:12:39,290 1648 [ main] INFO ome.formats.OMEROMetadataStoreClient - OS Version: 5.14.0-427.40.1.el9_4.x86_64 07:16:03 2024-10-24 08:12:49,366 11724 [ main] ERROR ome.system.UpgradeCheck - Error reading from url: http://upgrade.openmicroscopy.org.uk?version=5.7.5-SNAPSHOT;os.name=Linux;os.arch=amd64;os.version=5.14.0-427.40.1.el9_4.x86_64;java.runtime.version=11.0.24%2B8-LTS;java.vm.vendor=Red+Hat%2C+Inc. "connect timed out" 07:16:03 2024-10-24 08:12:49,615 11973 [ main] INFO ome.formats.importer.ImportConfig - Using import target: Screen:232 07:16:03 2024-10-24 08:12:49,631 11989 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Could not load target: ome.formats.importer.targets.ModelImportTarget@21e5a652 07:16:03 2024-10-24 08:12:49,631 11989 [2-thread-1] ERROR ome.formats.importer.ImportLibrary - Error on import 07:16:03 java.lang.RuntimeException: Failed to load target 07:16:03 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:351) 07:16:03 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:328) 07:16:03 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 07:16:03 at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515) 07:16:03 at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) 07:16:03 at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) 07:16:03 at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 Caused by: omero.SecurityViolation: null 07:16:03 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) 07:16:03 at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) 07:16:03 at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) 07:16:03 at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490) 07:16:03 at java.base/java.lang.Class.newInstance(Class.java:584) 07:16:03 at IceInternal.BasicStream.createUserException(BasicStream.java:2785) 07:16:03 at IceInternal.BasicStream.access$300(BasicStream.java:14) 07:16:03 at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620) 07:16:03 at IceInternal.BasicStream.throwException(BasicStream.java:2291) 07:16:03 at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399) 07:16:03 at omero.api.IQueryPrxHelper.end_get(IQueryPrxHelper.java:2000) 07:16:03 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1872) 07:16:03 at omero.api.IQueryPrxHelper.get(IQueryPrxHelper.java:1859) 07:16:03 at ome.formats.importer.targets.ModelImportTarget.load(ModelImportTarget.java:219) 07:16:03 at ome.formats.importer.ImportLibrary$1.call(ImportLibrary.java:334) 07:16:03 ... 7 common frames omitted 07:16:03 2024-10-24 08:12:49,633 11991 [2-thread-1] INFO ome.formats.importer.ImportLibrary - Exiting on error 07:16:03 ==> Summary 07:16:03 0 files uploaded, 0 filesets created, 0 images imported, 0 errors in 0:00:00.267 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.util.Resources:__init__.py:652 Starting 07:16:03 INFO omero.util.Resources:__init__.py:669 Halted 07:16:03 ________________________ TestHistory.testCreateHistory _________________________ 07:16:03 self = <test.integration.gatewaytest.test_multi_group.TestHistory object at 0x7f7a404cc130> 07:16:03 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f7a0c970a30> 07:16:03 @pytest.mark.broken(ticket="11494") 07:16:03 def testCreateHistory(self, gatewaywrapper): 07:16:03 # Login as user... 07:16:03 gatewaywrapper.doLogin(dbhelpers.USERS['history_test_user']) 07:16:03 userId = gatewaywrapper.gateway.getEventContext().userId 07:16:03 uuid = gatewaywrapper.gateway.getEventContext().sessionUuid 07:16:03 default_groupId = gatewaywrapper.gateway.getEventContext().groupId 07:16:03 start = int(round(time.time() * 1000)) - 1000 07:16:03 # Create Dataset in 'default' group 07:16:03 update = gatewaywrapper.gateway.getUpdateService() 07:16:03 new_ds = omero.model.DatasetI() 07:16:03 dataset_name = "history_test_%s" % uuid 07:16:03 new_ds.name = rstring(dataset_name) 07:16:03 new_ds = update.saveAndReturnObject(new_ds) 07:16:03 new_ds_Id = new_ds.id.val 07:16:03 # As Admin, create a second group with this user & upload script 07:16:03 gatewaywrapper.loginAsAdmin() 07:16:03 gid = gatewaywrapper.gateway.createGroup( 07:16:03 "history-test-%s" % uuid, member_Ids=[userId], perms=READWRITE) 07:16:03 # login as User 07:16:03 gatewaywrapper.doLogin(dbhelpers.USERS['history_test_user']) 07:16:03 end = int(round(time.time() * 1000)) + 1000 07:16:03 self.searchHistory(gatewaywrapper.gateway, start, end) 07:16:03 # switch user into new group 07:16:03 switched = gatewaywrapper.gateway.c.sf.setSecurityContext( 07:16:03 omero.model.ExperimenterGroupI(gid, False)) 07:16:03 assert switched, "Failed to switch into new group" 07:16:03 # Shouldn't be able to access Dataset... 07:16:03 > self.searchHistory(gatewaywrapper.gateway, start, end) 07:16:03 test/integration/gatewaytest/test_multi_group.py:96: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <test.integration.gatewaytest.test_multi_group.TestHistory object at 0x7f7a404cc130> 07:16:03 gateway = <omero.gateway._BlitzGateway object at 0x7f7a0a6829a0> 07:16:03 start = 1729753970253, end = 1729753972398, dtype = 'Dataset' 07:16:03 def searchHistory(self, gateway, start, end, dtype="Dataset"): 07:16:03 tm = gateway.getTimelineService() 07:16:03 count = tm.countByPeriod([dtype], rtime(int(start)), 07:16:03 rtime(int(end)), None, gateway.SERVICE_OPTS) 07:16:03 data = tm.getByPeriod([dtype], rtime(int(start)), rtime(int(end)), 07:16:03 None, True, gateway.SERVICE_OPTS) 07:16:03 logs = tm.getEventLogsByPeriod(rtime(start), rtime(end), None, 07:16:03 gateway.SERVICE_OPTS) 07:16:03 entityType = 'ome.model.containers.%s' % dtype 07:16:03 filteredLogs = [{'id': i.entityId.val, 'action': i.action.val} 07:16:03 for i in logs if i.entityType.val == entityType] 07:16:03 typeCount = count[dtype] 07:16:03 dataCount = len(data[dtype]) 07:16:03 logCount = len(filteredLogs) 07:16:03 assert typeCount == dataCount, \ 07:16:03 "Period count should match number of objects" 07:16:03 > assert logCount == dataCount, \ 07:16:03 "Logs count should match number of objects" 07:16:03 E AssertionError: Logs count should match number of objects 07:16:03 E assert 1 == 0 07:16:03 test/integration/gatewaytest/test_multi_group.py:58: AssertionError 07:16:03 ------------------------------ Captured log setup ------------------------------ 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=98a47330-3fa8-4ac3-9cbf-cc26e12186af) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=b17acd38-84c6-44b2-95b2-5258b7b48949) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=5515b245-90df-4cc1-9c9d-4d73ec48f267) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=77cde3e0-b738-41c8-a0e9-49463c9e5b32) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=4c991a9f-de40-4c15-90f6-43d0ed3235b2) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=502fdaab-d285-4f9b-af38-aa505f51f31a) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=74b6c69a-6399-4e0e-97c7-963e2af0802a) 07:16:03 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <5045a391-3c49-45a9-b761-63ed336f87fbomero.api.IAdmin> lookupExperimenter(('history_test_user',), {}) 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__ 07:16:03 return self.f(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 824, in lookupExperimenter 07:16:03 return _M_omero.api.IAdmin._op_lookupExperimenter.invoke(self, ((name, ), _ctx)) 07:16:03 omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ApiUsageException: No such experimenter: history_test_user 07:16:03 at ome.logic.AdminImpl.lookupExperimenter(AdminImpl.java:325) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor631.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupExperimenter(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor631.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupExperimenter(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3372.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.AdminI.lookupExperimenter_async(AdminI.java:256) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3371.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy97.lookupExperimenter_async(Unknown Source) 07:16:03 at omero.api._IAdminTie.lookupExperimenter_async(_IAdminTie.java:264) 07:16:03 at omero.api._IAdminDisp.___lookupExperimenter(_IAdminDisp.java:924) 07:16:03 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2345) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 message = No such experimenter: history_test_user 07:16:03 } 07:16:03 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <5045a391-3c49-45a9-b761-63ed336f87fbomero.api.IAdmin> lookupGroup(('rw_history',), {}) 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__ 07:16:03 return self.f(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 937, in lookupGroup 07:16:03 return _M_omero.api.IAdmin._op_lookupGroup.invoke(self, ((name, ), _ctx)) 07:16:03 omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ApiUsageException: No such group: rw_history 07:16:03 at ome.logic.AdminImpl.lookupGroup(AdminImpl.java:366) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor563.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupGroup(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor563.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupGroup(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor589.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.AdminI.lookupGroup_async(AdminI.java:266) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor588.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy97.lookupGroup_async(Unknown Source) 07:16:03 at omero.api._IAdminTie.lookupGroup_async(_IAdminTie.java:276) 07:16:03 at omero.api._IAdminDisp.___lookupGroup(_IAdminDisp.java:990) 07:16:03 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2353) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 message = No such group: rw_history 07:16:03 } 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=2a7be226-a1f2-4431-8f5e-7b2a84350c33) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=4ebfe81c-612c-4d9d-b068-e4233fb32224) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=908d1fd1-06b9-4bca-b5d3-752a12d2ca42) 07:16:03 --------------------------- Captured stderr teardown --------------------------- 07:16:03 ** 07:16:03 ---------------------------- Captured log teardown ----------------------------- 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=d43895cb-589e-4f85-a9c7-ff1ca648a0c4) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=7cef1681-e9ff-421b-ad8e-3770132fa09a) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=a6ecd770-0988-4d19-837a-4a88cc6cadb3) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 ___________________________ TestScript.testRunScript ___________________________ 07:16:03 self = <test.integration.gatewaytest.test_multi_group.TestScript object at 0x7f7a404d5fa0> 07:16:03 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f7a0c84a340> 07:16:03 @pytest.mark.broken(ticket="11610") 07:16:03 def testRunScript(self, gatewaywrapper): 07:16:03 # Login as user... 07:16:03 gatewaywrapper.doLogin(dbhelpers.USERS['script_test_user']) 07:16:03 userId = gatewaywrapper.gateway.getEventContext().userId 07:16:03 uuid = gatewaywrapper.gateway.getEventContext().sessionUuid 07:16:03 default_groupId = gatewaywrapper.gateway.getEventContext().groupId 07:16:03 # Create Dataset in 'default' group 07:16:03 update = gatewaywrapper.gateway.getUpdateService() 07:16:03 new_ds = omero.model.DatasetI() 07:16:03 dataset_name = "script_test_%s" % uuid 07:16:03 new_ds.name = rstring(dataset_name) 07:16:03 new_ds = update.saveAndReturnObject(new_ds) 07:16:03 new_ds_Id = new_ds.id.val 07:16:03 # As Admin, create a second group with this user & upload script 07:16:03 gatewaywrapper.loginAsAdmin() 07:16:03 gid = gatewaywrapper.gateway.createGroup( 07:16:03 "script-test-%s" % uuid, member_Ids=[userId], perms=READWRITE) 07:16:03 SCRIPT = """if True: 07:16:03 import omero.scripts 07:16:03 import omero.rtypes 07:16:03 client = omero.scripts.client("ticket8573", \ 07:16:03 omero.scripts.Long("datasetId"), \ 07:16:03 omero.scripts.String("datasetName", out=True)) 07:16:03 ec = client.sf.getAdminService().getEventContext() 07:16:03 gid = ec.groupId 07:16:03 qs = client.sf.getQueryService() 07:16:03 ds_Id = client.getInput("datasetId").getValue() 07:16:03 print("Running test...") # generate stdout 07:16:03 try: 07:16:03 dataset = qs.find("Dataset", ds_Id) 07:16:03 ds_Name = dataset.name.val 07:16:03 print(ds_Name) 07:16:03 except Exception: 07:16:03 ds_Name = "Not Found" 07:16:03 client.setOutput("gid", omero.rtypes.rlong(gid)) 07:16:03 client.setOutput("datasetName", omero.rtypes.rstring(ds_Name)) 07:16:03 """ 07:16:03 svc = gatewaywrapper.gateway.getScriptService() 07:16:03 scriptID = svc.uploadOfficialScript( 07:16:03 "/test/ticket8573/%s" % uuid, SCRIPT) 07:16:03 # switch user into new group 07:16:03 gatewaywrapper.doLogin(dbhelpers.USERS['script_test_user']) 07:16:03 switched = gatewaywrapper.gateway.c.sf.setSecurityContext( 07:16:03 omero.model.ExperimenterGroupI(gid, False)) 07:16:03 assert switched, "Failed to switch into new group" 07:16:03 # Shouldn't be able to access Dataset... 07:16:03 value = gatewaywrapper.gateway.getObject("Dataset", new_ds_Id) 07:16:03 assert value is None 07:16:03 gatewaywrapper.gateway.SERVICE_OPTS.setOmeroGroup( 07:16:03 str(default_groupId)) 07:16:03 value = gatewaywrapper.gateway.getObject("Dataset", new_ds_Id) 07:16:03 assert value is not None 07:16:03 # run script 07:16:03 svc = gatewaywrapper.gateway.getScriptService() 07:16:03 > process = svc.runScript(scriptID, {"datasetId": rlong(new_ds_Id)}, 07:16:03 None, gatewaywrapper.gateway.SERVICE_OPTS) 07:16:03 test/integration/gatewaytest/test_multi_group.py:188: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4833: in __call__ 07:16:03 return self.handle_exception(e, *args, **kwargs) 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4830: in __call__ 07:16:03 return self.f(*args, **kwargs) 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = 5dc53f01-284c-437d-9b7e-caec06d5f787/93fc0a43-9c40-4dcd-a1cb-35d0024d4a4comero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 scriptID = 5945 07:16:03 inputs = {'datasetId': object #0 (::omero::RLong) 07:16:03 { 07:16:03 _val = 1354 07:16:03 }} 07:16:03 waitSecs = None 07:16:03 _ctx = <ServiceOptsDict: {'omero.client.uuid': '93fc0a43-9c40-4dcd-a1cb-35d0024d4a4c', 'omero.session.uuid': '5dc53f01-284c-437d-9b7e-caec06d5f787', 'omero.group': '3660'}> 07:16:03 def runScript(self, scriptID, inputs, waitSecs, _ctx=None): 07:16:03 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx)) 07:16:03 E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 E { 07:16:03 E serverStackTrace = 07:16:03 E serverExceptionClass = 07:16:03 E message = No processor available! [0 response(s)] 07:16:03 E processorCount = 0 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable 07:16:03 ------------------------------ Captured log setup ------------------------------ 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=8f99b03c-c1c8-43e8-b70b-2f5adcd87464) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=4a31222b-4ff7-453b-9a7d-d5d52f9880bb) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=b5c5d1a2-185a-4fbd-859b-f2d2ca649429) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=9b390c56-cb0b-4356-a88a-395e4476aef6) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=a1b96777-00e8-4dcc-8f2d-5a928d1aa2fc) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=2e8539a0-9873-4561-a746-46cc53b5601d) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=3fefa7db-be61-4b8c-bc87-1c590331370b) 07:16:03 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <5f326e87-9143-4773-bb48-c3b6ca8b5c16omero.api.IAdmin> lookupExperimenter(('script_test_user',), {}) 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__ 07:16:03 return self.f(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 824, in lookupExperimenter 07:16:03 return _M_omero.api.IAdmin._op_lookupExperimenter.invoke(self, ((name, ), _ctx)) 07:16:03 omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ApiUsageException: No such experimenter: script_test_user 07:16:03 at ome.logic.AdminImpl.lookupExperimenter(AdminImpl.java:325) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor631.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupExperimenter(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor631.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupExperimenter(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3372.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.AdminI.lookupExperimenter_async(AdminI.java:256) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3371.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy97.lookupExperimenter_async(Unknown Source) 07:16:03 at omero.api._IAdminTie.lookupExperimenter_async(_IAdminTie.java:264) 07:16:03 at omero.api._IAdminDisp.___lookupExperimenter(_IAdminDisp.java:924) 07:16:03 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2345) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 message = No such experimenter: script_test_user 07:16:03 } 07:16:03 WARNING omero.gateway:__init__.py:4810 ApiUsageException on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <5f326e87-9143-4773-bb48-c3b6ca8b5c16omero.api.IAdmin> lookupGroup(('rw_script',), {}) 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__ 07:16:03 return self.f(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py", line 937, in lookupGroup 07:16:03 return _M_omero.api.IAdmin._op_lookupGroup.invoke(self, ((name, ), _ctx)) 07:16:03 omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ApiUsageException: No such group: rw_script 07:16:03 at ome.logic.AdminImpl.lookupGroup(AdminImpl.java:366) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor563.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupGroup(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor563.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.lookupGroup(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor589.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.AdminI.lookupGroup_async(AdminI.java:266) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor588.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy97.lookupGroup_async(Unknown Source) 07:16:03 at omero.api._IAdminTie.lookupGroup_async(_IAdminTie.java:276) 07:16:03 at omero.api._IAdminDisp.___lookupGroup(_IAdminDisp.java:990) 07:16:03 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2353) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 message = No such group: rw_script 07:16:03 } 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=65a18050-5f8f-4537-92bc-e799d39c5547) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=12330792-083f-425c-93e9-b943119e99b2) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=5dc53f01-284c-437d-9b7e-caec06d5f787) 07:16:03 WARNING omero.gateway:__init__.py:4810 NoProcessorAvailable on <class 'omero.gateway.OmeroGatewaySafeCallWrapper'> to <93fc0a43-9c40-4dcd-a1cb-35d0024d4a4comero.api.IScript> runScript((5945, {'datasetId': object #0 (::omero::RLong) 07:16:03 { 07:16:03 _val = 1354 07:16:03 }}, None, <ServiceOptsDict: {'omero.client.uuid': '93fc0a43-9c40-4dcd-a1cb-35d0024d4a4c', 'omero.session.uuid': '5dc53f01-284c-437d-9b7e-caec06d5f787', 'omero.group': '3660'}>), {}) 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py", line 4830, in __call__ 07:16:03 return self.f(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 935, in runScript 07:16:03 return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx)) 07:16:03 omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 { 07:16:03 serverStackTrace = 07:16:03 serverExceptionClass = 07:16:03 message = No processor available! [0 response(s)] 07:16:03 processorCount = 0 07:16:03 } 07:16:03 --------------------------- Captured stderr teardown --------------------------- 07:16:03 ** 07:16:03 ---------------------------- Captured log teardown ----------------------------- 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=5f4247a9-6d67-4c93-847a-74bd9530cb2a) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=8817ea2c-602b-4e6c-a160-b1f1b036314d) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=7d6ab483-eb1c-42d5-87f2-96e3d47439c7) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 ___________________ TestPerformance.testListFileAnnotations ____________________ 07:16:03 self = <test.integration.gatewaytest.test_performance.TestPerformance object at 0x7f7a404dd6a0> 07:16:03 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f7a0c86feb0> 07:16:03 @pytest.mark.broken(ticket="11494") 07:16:03 def testListFileAnnotations(self, gatewaywrapper): 07:16:03 """ 07:16:03 testListFileAnnotations: test speed of getObjects('FileAnnotation') vv 07:16:03 listFileAnnotations() 07:16:03 """ 07:16:03 gatewaywrapper.loginAsAuthor() 07:16:03 updateService = gatewaywrapper.gateway.getUpdateService() 07:16:03 def createFileAnnotation(name, ns): 07:16:03 originalFile = omero.model.OriginalFileI() 07:16:03 originalFile.setName(rstring(name)) 07:16:03 originalFile.setPath(rstring(name)) 07:16:03 originalFile.setSize(rlong(0)) 07:16:03 originalFile.setHash(rstring("Foo")) 07:16:03 originalFile = updateService.saveAndReturnObject(originalFile) 07:16:03 fa = omero.model.FileAnnotationI() 07:16:03 fa.setFile(originalFile) 07:16:03 fa.setNs(rstring(ns)) 07:16:03 fa = updateService.saveAndReturnObject(fa) 07:16:03 return fa.id.val 07:16:03 ns = "omero.gatewaytest.PerformanceTest.testListFileAnnotations" 07:16:03 fileCount = 250 07:16:03 fileAnnIds = [createFileAnnotation("testListFileAnnotations%s" % i, 07:16:03 ns) for i in range(fileCount)] 07:16:03 # test speed of listFileAnnotations 07:16:03 startTime = time.time() 07:16:03 fileCount = 0 07:16:03 fileAnns = gatewaywrapper.gateway.listFileAnnotations(toInclude=[ns]) 07:16:03 for fa in fileAnns: 07:16:03 fa.getFileName() 07:16:03 fileCount += 1 07:16:03 t1 = time.time() - startTime 07:16:03 print("listFileAnnotations for %d files = %s secs" % (fileCount, t1)) 07:16:03 # Typically 1.4 secs 07:16:03 # test speed of getOjbects("Annotation") - lazy loading file names 07:16:03 startTime = time.time() 07:16:03 fileCount = 0 07:16:03 fileAnns = gatewaywrapper.gateway.getObjects( 07:16:03 "FileAnnotation", attributes={'ns': ns}) 07:16:03 for fa in fileAnns: 07:16:03 fa.getFileName() 07:16:03 fileCount += 1 07:16:03 t2 = time.time() - startTime 07:16:03 print("getObjects, lazy loading file names for %d files = %s secs" 07:16:03 % (fileCount, t2)) # Typically 2.8 secs 07:16:03 # test speed of getOjbects("Annotation") - NO loading file names 07:16:03 startTime = time.time() 07:16:03 fileCount = 0 07:16:03 fileAnns = gatewaywrapper.gateway.getObjects( 07:16:03 "FileAnnotation", attributes={'ns': ns}) 07:16:03 for fa in fileAnns: 07:16:03 fa.getId() 07:16:03 fileCount += 1 07:16:03 t3 = time.time() - startTime 07:16:03 print("getObjects, NO file names for %d files = %s secs" 07:16:03 % (fileCount, t3)) # Typically 0.4 secs 07:16:03 > assert t1 < t2, "Blitz listFileAnnotations() should be faster " \ 07:16:03 "than getObjects('FileAnnotation')" 07:16:03 E AssertionError: Blitz listFileAnnotations() should be faster than getObjects('FileAnnotation') 07:16:03 E assert 0.3212752342224121 < 0.16168785095214844 07:16:03 test/integration/gatewaytest/test_performance.py:91: AssertionError 07:16:03 ------------------------------ Captured log setup ------------------------------ 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=404e6440-3a07-4469-8b04-b6460ee21443) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=b63f6848-ede2-4bc6-b227-3155aa7ae572) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=a6a17da0-a37f-4ac2-b2e1-7f1e9ea652ad) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=8293dbfb-c51f-414b-b96e-5225ef0a3217) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=e6c7a033-2df8-4819-842f-bd6191e8e0bf) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=9f2394fb-dcd0-405c-841e-08aacf0177ff) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 ----------------------------- Captured stdout call ----------------------------- 07:16:03 listFileAnnotations for 250 files = 0.3212752342224121 secs 07:16:03 getObjects, lazy loading file names for 250 files = 0.16168785095214844 secs 07:16:03 getObjects, NO file names for 250 files = 0.15201234817504883 secs 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=15a7cb8d-9491-4f70-b8fa-1118f5ba9e67) 07:16:03 --------------------------- Captured stderr teardown --------------------------- 07:16:03 ** 07:16:03 ---------------------------- Captured log teardown ----------------------------- 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=a8327c10-befa-4902-a47c-56b3c1723446) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=59075075-2813-42f4-93f9-301d94cada2b) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=3f9810e5-d36d-4d01-8e35-74745cc91ba4) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 _________________________ TestUser.testCrossGroupRead __________________________ 07:16:03 self = <test.integration.gatewaytest.test_user.TestUser object at 0x7f7a404b5fa0> 07:16:03 gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f7a0c9a12e0> 07:16:03 @pytest.mark.broken(ticket="11545") 07:16:03 def testCrossGroupRead(self, gatewaywrapper): 07:16:03 gatewaywrapper.loginAsAuthor() 07:16:03 p = gatewaywrapper.getTestProject() 07:16:03 assert str(p.getDetails().permissions)[4] == '-' 07:16:03 d = p.getDetails() 07:16:03 g = d.getGroup() 07:16:03 gatewaywrapper.loginAsUser() 07:16:03 gatewaywrapper.gateway.SERVICE_OPTS.setOmeroGroup('-1') 07:16:03 > assert not g.getId() in \ 07:16:03 gatewaywrapper.gateway.getEventContext().memberOfGroups 07:16:03 E assert not 2719 in [2718, 1, 2730, 2719, 2780] 07:16:03 E + where 2719 = getId() 07:16:03 E + where getId = <_ExperimenterGroupWrapper id=2719>.getId 07:16:03 E + and [2718, 1, 2730, 2719, 2780] = object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 9b756529-dc91-4678-b52c-11c942c2d2aa\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n}.memberOfGroups 07:16:03 E + where object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 9b756529-dc91-4678-b52c-11c942c2d2aa\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n} = getEventContext() 07:16:03 E + where getEventContext = <omero.gateway._BlitzGateway object at 0x7f7a0a5e3a90>.getEventContext 07:16:03 E + where <omero.gateway._BlitzGateway object at 0x7f7a0a5e3a90> = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f7a0c9a12e0>.gateway 07:16:03 test/integration/gatewaytest/test_user.py:127: AssertionError 07:16:03 ------------------------------ Captured log setup ------------------------------ 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=a03f1047-adbd-4607-92a9-e06c17902217) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=1a5adfda-827c-415e-9194-0d0dc132906b) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=98bb1b98-aa7d-42c8-81ec-0783646c5825) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=60f25801-3dc5-4b60-abec-e3081f8163f7) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=1b4ebd6b-d3c1-47c5-ac4d-2338352150ee) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=0e16902f-b999-4013-a672-b3d201f1089a) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=dd421369-3a2b-4f13-8f62-3d38ee852803) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=9b756529-dc91-4678-b52c-11c942c2d2aa) 07:16:03 --------------------------- Captured stderr teardown --------------------------- 07:16:03 ** 07:16:03 ---------------------------- Captured log teardown ----------------------------- 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=fd26e80f-20dc-4ea4-b5f7-4a385b1c1f86) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=8dae1d58-0a0b-4088-9996-d11e9c0d5a74) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 INFO omero.gateway:__init__.py:2243 created connection (uuid=e0d8ad95-95da-4516-bea2-b13e1b871fe6) 07:16:03 INFO omero.gateway:__init__.py:1940 closed connection (uuid=None) 07:16:03 _________________________ TestPing.testProcessCallback _________________________ 07:16:03 self = <test.integration.scriptstest.test_ping.TestPing object at 0x7f7a403f03a0> 07:16:03 @pytest.mark.broken(ticket="11494") 07:16:03 def testProcessCallback(self): 07:16:03 callback = CallbackI() 07:16:03 id = self.client.getCommunicator().stringToIdentity(str(uuid.uuid4())) 07:16:03 cb = self.client.getAdapter().add(callback, id) 07:16:03 cb = omero.grid.ProcessCallbackPrx.uncheckedCast(cb) 07:16:03 p = self._getProcessor() 07:16:03 params = p.params() 07:16:03 assert params.stdoutFormat 07:16:03 process = p.execute(rmap({})) 07:16:03 process.registerCallback(cb) 07:16:03 self.assertSuccess(p, process) 07:16:03 > assert len(callback.finish) > 0 07:16:03 E assert 0 > 0 07:16:03 E + where 0 = len([]) 07:16:03 E + where [] = object #0 (::omero::grid::ProcessCallback)\n{\n}.finish 07:16:03 test/integration/scriptstest/test_ping.py:214: AssertionError 07:16:03 ______________________ TestScriptRepo.testGetGroupScripts ______________________ 07:16:03 self = <test.integration.scriptstest.test_repo.TestScriptRepo object at 0x7f7a403f9e80> 07:16:03 @pytest.mark.broken(ticket="11494") 07:16:03 def testGetGroupScripts(self): 07:16:03 scriptService = self.sf.getScriptService() 07:16:03 client = self.new_client(self.group) 07:16:03 sid = client.sf.getScriptService().uploadScript( 07:16:03 "/test/otheruser.py", 07:16:03 """if True: 07:16:03 import omero, omero.scripts as OS 07:16:03 OS.client("testGetGroupScripts") 07:16:03 """) 07:16:03 myGroupScripts = scriptService.getUserScripts( 07:16:03 [omero.model.ExperimenterGroupI(self.group.id.val, False)]) 07:16:03 > assert sid in [x.id.val for x in myGroupScripts] 07:16:03 E assert 6201 in [] 07:16:03 test/integration/scriptstest/test_repo.py:78: AssertionError 07:16:03 _____________________________ TestTables.test2098 ______________________________ 07:16:03 self = <test_service.TestTables object at 0x7f7a3ba1d310> 07:16:03 @pytest.mark.broken(ticket="11534") 07:16:03 def test2098(self): 07:16:03 """ 07:16:03 Creates and downloads an HDF file and checks 07:16:03 that its size and hash match whats in the db 07:16:03 """ 07:16:03 grid = self.client.sf.sharedResources() 07:16:03 table = grid.newTable(1, "/test") 07:16:03 assert table 07:16:03 lc = columns.LongColumnI('lc', 'desc', [1]) 07:16:03 file = None 07:16:03 try: 07:16:03 file = table.getOriginalFile() 07:16:03 assert file 07:16:03 table.initialize([lc]) 07:16:03 table.addData([lc]) 07:16:03 finally: 07:16:03 # Not deleting since queried 07:16:03 table.close() 07:16:03 # Reload the file 07:16:03 file = self.client.sf.getQueryService().get( 07:16:03 "OriginalFile", file.id.val) 07:16:03 # Check values 07:16:03 > p = path.path(self.tmpfile()) 07:16:03 E AttributeError: type object 'path' has no attribute 'path' 07:16:03 test/integration/tablestest/test_service.py:154: AttributeError 07:16:03 _________________________ TestTables.testReadOnlyFile __________________________ 07:16:03 self = <test_service.TestTables object at 0x7f7a3b9aa3a0> 07:16:03 @pytest.mark.broken(ticket="unimplemented") 07:16:03 def testReadOnlyFile(self): 07:16:03 """ 07:16:03 Create an HDF5 file on the server, and then mark it read-only. 07:16:03 The server should still allow you to load & read that file. 07:16:03 """ 07:16:03 self.testBlankTable() # ofile 07:16:03 > filename = self.unique_dir + "/file.txt" 07:16:03 E AttributeError: 'TestTables' object has no attribute 'unique_dir' 07:16:03 test/integration/tablestest/test_service.py:661: AttributeError 07:16:03 ___________________________ TestTables.testReadEqual ___________________________ 07:16:03 self = <test_service.TestTables object at 0x7f7a3b9b5580> 07:16:03 twoColumnFiveRowTable = 473bca6c-804b-4ae8-a75f-67988e0b80b1/Table-16c40e25-786d-4b28-a12e-e5e2b1128d6a -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 @pytest.mark.broken(reason="start=0,end=0 to be reviewed") 07:16:03 def testReadEqual(self, twoColumnFiveRowTable): 07:16:03 # start=0, end=0 has a special contract 07:16:03 data = twoColumnFiveRowTable.read([0], 0, 0) 07:16:03 assert 1 == len(data.columns) 07:16:03 > assert [1] == data.columns[0].values 07:16:03 E assert [1] == [1, 2, 3, 4, 5] 07:16:03 E 07:16:03 E Right contains 4 more items, first extra item: 2 07:16:03 E 07:16:03 E Full diff: 07:16:03 E [ 07:16:03 E 1, 07:16:03 E - 2, 07:16:03 E - 3, 07:16:03 E - 4, 07:16:03 E - 5, 07:16:03 E ] 07:16:03 test/integration/tablestest/test_service.py:967: AssertionError 07:16:03 ________________________ TestTables.testReadOutOfRange _________________________ 07:16:03 self = <test_service.TestTables object at 0x7f7a3b9b5d00> 07:16:03 twoColumnFiveRowTable = 473bca6c-804b-4ae8-a75f-67988e0b80b1/Table-22b94011-4a69-4b54-b389-94030e173e1d -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 @pytest.mark.broken(reason="need to be reviewed") 07:16:03 def testReadOutOfRange(self, twoColumnFiveRowTable): 07:16:03 # [1, 2, 3, 4, 5][-1:5] = [5] 07:16:03 data = twoColumnFiveRowTable.read([0], -1, 5) 07:16:03 assert 1 == len(data.columns) 07:16:03 assert [5] == data.columns[0].values 07:16:03 > assert [4] == data.rowNumbers 07:16:03 E assert [4] == [-1, 0, 1, 2, 3, 4] 07:16:03 E 07:16:03 E At index 0 diff: 4 != -1 07:16:03 E Right contains 5 more items, first extra item: 0 07:16:03 E 07:16:03 E Full diff: 07:16:03 E [ 07:16:03 E - -1, 07:16:03 E - 0, 07:16:03 E - 1, 07:16:03 E - 2, 07:16:03 E - 3, 07:16:03 E 4, 07:16:03 E ] 07:16:03 test/integration/tablestest/test_service.py:1015: AssertionError 07:16:03 ____________________ TestAdmin.testChangePasswordWhenUnset _____________________ 07:16:03 self = <test.integration.test_admin.TestAdmin object at 0x7f7a3b9c8850> 07:16:03 @pytest.mark.broken(reason="Empty password disabled by config", 07:16:03 ticket="3201") 07:16:03 def testChangePasswordWhenUnset(self): 07:16:03 """ 07:16:03 Shows that it's possible to use the 07:16:03 changePasswordWithOldPassword when 07:16:03 previously no password was set. 07:16:03 See ticket:3201 07:16:03 """ 07:16:03 client = self.new_client() 07:16:03 admin = client.sf.getAdminService() 07:16:03 # By setting the user's password to the empty string 07:16:03 # any password will be allowed as the old password 07:16:03 admin.changePassword(rstring("")) 07:16:03 > admin.changePasswordWithOldPassword(rstring("IGNORED"), rstring("ome")) 07:16:03 test/integration/test_admin.py:118: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = 64797a2a-2e21-402c-82bc-1fa24e24cc2a/ef79ab4b-3c80-415a-8d92-dfdf99a84758omero.api.IAdmin -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 oldPassword = object #0 (::omero::RString) 07:16:03 { 07:16:03 _val = IGNORED 07:16:03 } 07:16:03 newPassword = object #0 (::omero::RString) 07:16:03 { 07:16:03 _val = ome 07:16:03 }, _ctx = None 07:16:03 def changePasswordWithOldPassword(self, oldPassword, newPassword, _ctx=None): 07:16:03 > return _M_omero.api.IAdmin._op_changePasswordWithOldPassword.invoke(self, ((oldPassword, newPassword), _ctx)) 07:16:03 E omero.SecurityViolation: exception ::omero::SecurityViolation 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.SecurityViolation: Old password is invalid 07:16:03 E at ome.logic.AdminImpl.changePasswordWithOldPassword(AdminImpl.java:1253) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy96.changePasswordWithOldPassword(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy96.changePasswordWithOldPassword(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.AdminI.changePasswordWithOldPassword_async(AdminI.java:144) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 E at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy97.changePasswordWithOldPassword_async(Unknown Source) 07:16:03 E at omero.api._IAdminTie.changePasswordWithOldPassword_async(_IAdminTie.java:112) 07:16:03 E at omero.api._IAdminDisp.___changePasswordWithOldPassword(_IAdminDisp.java:1977) 07:16:03 E at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2229) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.SecurityViolation 07:16:03 E message = Old password is invalid 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py:2460: SecurityViolation 07:16:03 ______________________________ TestAdmin.test9193 ______________________________ 07:16:03 self = <test.integration.test_admin.TestAdmin object at 0x7f7a3b9cb790> 07:16:03 @pytest.mark.broken(reason="Is this test still valid?", ticket="11465") 07:16:03 def test9193(self): 07:16:03 # Test the removal of removing users 07:16:03 # from a group when the group in question 07:16:03 # may be their last (i.e. default) group 07:16:03 g = self.new_group() 07:16:03 u = self.new_user(group=g) 07:16:03 # Test removing the default group 07:16:03 > self.remove_experimenters(g, [u]) 07:16:03 test/integration/test_admin.py:240: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:247: in remove_experimenters 07:16:03 admin.removeGroups(user, [group]) 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = 0e3eb9dc-a60a-41d0-8750-790a16d403fb/03052890-9845-4570-9952-7276a2e3275eomero.api.IAdmin -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 user = object #0 (::omero::model::Experimenter) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 4726 07:16:03 } 07:16:03 _d...annotationLinksSeq = 07:16:03 { 07:16:03 } 07:16:03 _annotationLinksLoaded = False 07:16:03 _annotationLinksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 } 07:16:03 groups = [object #0 (::omero::model::ExperimenterGroup) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 3667 07:16:03 } 07:16:03 ...{ 07:16:03 } 07:16:03 _annotationLinksLoaded = False 07:16:03 _annotationLinksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 _description = <nil> 07:16:03 }] 07:16:03 _ctx = None 07:16:03 def removeGroups(self, user, groups, _ctx=None): 07:16:03 > return _M_omero.api.IAdmin._op_removeGroups.invoke(self, ((user, groups), _ctx)) 07:16:03 E omero.ValidationException: exception ::omero::ValidationException 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.ValidationException: experimenter cannot be a member of only the 'user' group, a different default group is also required 07:16:03 E at ome.logic.AdminImpl.removeGroups(AdminImpl.java:813) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor627.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy96.removeGroups(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor627.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy96.removeGroups(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor3269.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.AdminI.removeGroups_async(AdminI.java:318) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor3268.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy97.removeGroups_async(Unknown Source) 07:16:03 E at omero.api._IAdminTie.removeGroups_async(_IAdminTie.java:312) 07:16:03 E at omero.api._IAdminDisp.___removeGroups(_IAdminDisp.java:1621) 07:16:03 E at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2377) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.ValidationException 07:16:03 E message = experimenter cannot be a member of only the 'user' group, a different default group is also required 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IAdmin_ice.py:2011: ValidationException 07:16:03 _________________ TestFiles.testUploadDifferentSizeTicket2337 __________________ 07:16:03 self = <test.integration.test_files.TestFiles object at 0x7f7a3b960c70> 07:16:03 @pytest.mark.broken(ticket="11610") 07:16:03 def testUploadDifferentSizeTicket2337(self): 07:16:03 uploaded = tmpfile() 07:16:03 ofile = self.client.upload(str(uploaded), type="text/plain") 07:16:03 uploaded.write_lines(["abc", "def"]) # Shorten 07:16:03 > ofile = self.client.upload( 07:16:03 str(uploaded), type="text/plain", ofile=ofile) 07:16:03 test/integration/test_files.py:62: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/clients.py:878: in upload 07:16:03 ofile = up.saveAndReturnObject(ofile) 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = d07b75ee-9e98-4477-a1f4-bcd645352499/9c40b43c-4950-4032-af4f-df3170afb9b3omero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 obj = object #0 (::omero::model::OriginalFile) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 6206 07:16:03 } 07:16:03 _d...ksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 _name = object #60 (::omero::RString) 07:16:03 { 07:16:03 _val = omerok2jfbmsa.tmp 07:16:03 } 07:16:03 } 07:16:03 _ctx = None 07:16:03 def saveAndReturnObject(self, obj, _ctx=None): 07:16:03 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx)) 07:16:03 E omero.OptimisticLockException: exception ::omero::OptimisticLockException 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.OptimisticLockException: You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6206 from ome.model.meta.Event:Id_124677 to ome.model.meta.Event:Id_124676 07:16:03 E You may need to reload the object before continuing. 07:16:03 E at ome.security.basic.OmeroInterceptor.managedEvent(OmeroInterceptor.java:1201) 07:16:03 E at ome.security.basic.OmeroInterceptor.checkManagedDetails(OmeroInterceptor.java:963) 07:16:03 E at ome.security.basic.OmeroInterceptor.resetDetails(OmeroInterceptor.java:465) 07:16:03 E at ome.security.basic.OmeroInterceptor.onFlushDirty(OmeroInterceptor.java:239) 07:16:03 E at org.hibernate.event.def.DefaultFlushEntityEventListener.invokeInterceptor(DefaultFlushEntityEventListener.java:372) 07:16:03 E at org.hibernate.event.def.DefaultFlushEntityEventListener.handleInterception(DefaultFlushEntityEventListener.java:349) 07:16:03 E at org.hibernate.event.def.DefaultFlushEntityEventListener.scheduleUpdate(DefaultFlushEntityEventListener.java:287) 07:16:03 E at org.hibernate.event.def.DefaultFlushEntityEventListener.onFlushEntity(DefaultFlushEntityEventListener.java:155) 07:16:03 E at org.hibernate.event.def.AbstractFlushingEventListener.flushEntities(AbstractFlushingEventListener.java:219) 07:16:03 E at org.hibernate.event.def.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:99) 07:16:03 E at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50) 07:16:03 E at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1216) 07:16:03 E at ome.logic.UpdateImpl.afterUpdate(UpdateImpl.java:342) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:358) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.OptimisticLockException 07:16:03 E message = You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6206 from ome.model.meta.Event:Id_124677 to ome.model.meta.Event:Id_124676 07:16:03 E You may need to reload the object before continuing. 07:16:03 E backOff = 0 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: OptimisticLockException 07:16:03 _____________________________ TestIShare.test1172 ______________________________ 07:16:03 self = <test.integration.test_ishare.TestIShare object at 0x7f7a3b8bc4c0> 07:16:03 @pytest.mark.broken(reason="shares are image-centric for now") 07:16:03 def test1172(self): 07:16:03 uuid = self.root.sf.getAdminService().getEventContext().sessionUuid 07:16:03 share = self.root.sf.getShareService() 07:16:03 query = self.root.sf.getQueryService() 07:16:03 # create user 07:16:03 client_share1, user1 = self.new_client_and_user() 07:16:03 # create dataset with image 07:16:03 ds = self.make_dataset(name="dataset-%s" % uuid, client=self.root) 07:16:03 img = self.new_image(name='test-img in dataset-%s' % uuid) 07:16:03 self.link(ds, img, client=self.root) 07:16:03 items = list() 07:16:03 p = omero.sys.Parameters() 07:16:03 p.map = {"oid": ds.id} 07:16:03 sql = ( 07:16:03 "select ds from Dataset ds " 07:16:03 "join fetch ds.details.owner " 07:16:03 "join fetch ds.details.group " 07:16:03 "left outer join fetch ds.imageLinks dil " 07:16:03 "left outer join fetch dil.child i " 07:16:03 "where ds.id=:oid") 07:16:03 items.extend(query.findAllByQuery(sql, p)) 07:16:03 assert 1 == len(items) 07:16:03 # members 07:16:03 p.map["eid"] = rlong(user1.id.val) 07:16:03 sql = ("select e from Experimenter e " 07:16:03 "where e.id =:eid order by e.omeName") 07:16:03 ms = query.findAllByQuery(sql, p) 07:16:03 sid = share.createShare(("test-share-%s" % uuid), 07:16:03 rtime(int(time.time() * 1000 + 86400)), 07:16:03 items, ms, [], True) 07:16:03 # USER RETRIEVAL 07:16:03 # login as user1 07:16:03 share1 = client_share1.sf.getShareService() 07:16:03 query1 = client_share1.sf.getQueryService() 07:16:03 content = share1.getContents(sid) 07:16:03 # Content now contains just the dataset with nothing loaded 07:16:03 assert 1 == len(content) 07:16:03 # get shared dataset and image when share is activated 07:16:03 share1.activate(sid) 07:16:03 # retrieve dataset 07:16:03 p = omero.sys.Parameters() 07:16:03 p.map = {"ids": rlist([ds.id])} 07:16:03 sql = ( 07:16:03 "select ds from Dataset ds " 07:16:03 "join fetch ds.details.owner " 07:16:03 "join fetch ds.details.group " 07:16:03 "left outer join fetch ds.imageLinks dil " 07:16:03 "left outer join fetch dil.child i " 07:16:03 "where ds.id in (:ids) order by ds.name") 07:16:03 try: 07:16:03 res1 = query1.findAllByQuery(sql, p) 07:16:03 assert False, "This should throw an exception" 07:16:03 except Exception: 07:16:03 pass 07:16:03 # Now we add all the other elements to the share to prevent 07:16:03 # the security violation 07:16:03 # 07:16:03 # Not working imgs = cntar.getImages("Dataset",[ds.id.val], None) 07:16:03 img = query.findByQuery( 07:16:03 "select i from Image i join fetch i.datasetLinks dil " 07:16:03 "join dil.parent d where d.id = %s " % ds.id.val, None) 07:16:03 assert img 07:16:03 share.addObject(sid, img) 07:16:03 share.addObjects(sid, img.copyDatasetLinks()) 07:16:03 assert 3 == len(share.getContents(sid)) 07:16:03 # And try again to load them 07:16:03 share1.activate(sid) 07:16:03 res1 = query1.findAllByQuery(sql, p) 07:16:03 > assert len(res1) == 1 07:16:03 E assert 0 == 1 07:16:03 E + where 0 = len([]) 07:16:03 test/integration/test_ishare.py:381: AssertionError 07:16:03 ____________________________ TestITimeline.test1225 ____________________________ 07:16:03 self = <test.integration.test_itimeline.TestITimeline object at 0x7f7a3b8d2ac0> 07:16:03 @pytest.mark.broken(ticket="1225") 07:16:03 def test1225(self): 07:16:03 uuid = self.root.sf.getAdminService().getEventContext().sessionUuid 07:16:03 update = self.root.sf.getUpdateService() 07:16:03 timeline = self.root.sf.getTimelineService() 07:16:03 query = self.root.sf.getQueryService() 07:16:03 # create dataset 07:16:03 to_save = list() 07:16:03 for i in range(0, 10): 07:16:03 to_save.append(self.new_dataset(name="ds-%i-%s" % (i, uuid))) 07:16:03 dss = update.saveAndReturnArray(to_save) 07:16:03 # create tag 07:16:03 for i in range(0, 10): 07:16:03 ds1 = query.get("Dataset", dss[i].id.val) 07:16:03 ann = omero.model.TagAnnotationI() 07:16:03 ann.textValue = rstring('tag-%i-%s' % (i, uuid)) 07:16:03 ann.setDescription(rstring('desc-%i-%s' % (i, uuid))) 07:16:03 t_ann = omero.model.DatasetAnnotationLinkI() 07:16:03 t_ann.setParent(ds1) 07:16:03 t_ann.setChild(ann) 07:16:03 update.saveObject(t_ann) 07:16:03 p = omero.sys.Parameters() 07:16:03 p.map = {} 07:16:03 f = omero.sys.Filter() 07:16:03 f.ownerId = rlong(0) 07:16:03 f.limit = rint(10) 07:16:03 p.theFilter = f 07:16:03 M = timeline.getMostRecentAnnotationLinks 07:16:03 tagids = set([e.child.id.val for e in 07:16:03 M(None, ['TagAnnotation'], None, p)]) 07:16:03 assert len(tagids) == 10 07:16:03 # And under #9609 07:16:03 tagids = set([e.child.id.val for e in 07:16:03 M(None, ['TagAnnotation'], None, p, 07:16:03 {"omero.group": "-1"})]) 07:16:03 > assert len(tagids) == 10 07:16:03 E assert 6 == 10 07:16:03 E + where 6 = len({1908, 1944, 1995, 9450, 13072, 41480}) 07:16:03 test/integration/test_itimeline.py:244: AssertionError 07:16:03 ___________________________ TestPermissions.test3136 ___________________________ 07:16:03 self = <test.integration.test_permissions.TestPermissions object at 0x7f7a197b0a00> 07:16:03 @pytest.mark.broken(ticket="11494") 07:16:03 def test3136(self): 07:16:03 """ 07:16:03 Calls to updateGroup were taking too long 07:16:03 because the default value of permissions 07:16:03 returned by the server was triggering a 07:16:03 full changePermissions event. 07:16:03 """ 07:16:03 admin = self.root.sf.getAdminService() 07:16:03 group = self.new_group(perms="rw----") 07:16:03 # Change the name but not the permissions 07:16:03 group.name = rstring(self.uuid()) 07:16:03 elapsed1, rv = self.timeit(admin.updateGroup, group) 07:16:03 # Now change the name and the permissions 07:16:03 group.name = rstring(self.uuid()) 07:16:03 group.details.permissions = omero.model.PermissionsI("rwr---") 07:16:03 elapsed2, rv = self.timeit(admin.updateGroup, group) 07:16:03 # Locally this test always fails as the two times are 07:16:03 # the same order of magnitude. This may be an indication that 07:16:03 # the relevant ticket: 07:16:03 # https://trac.openmicroscopy.org/ome/ticket/3136 07:16:03 # is still valid. Does the ticket need re-opening 07:16:03 # or does the test condition need relaxing? 07:16:03 > assert elapsed1 < (0.1 * elapsed2), \ 07:16:03 "elapsed1=%s, elapsed2=%s" % (elapsed1, elapsed2) 07:16:03 E AssertionError: elapsed1=0.03419137001037598, elapsed2=0.01781940460205078 07:16:03 E assert 0.03419137001037598 < (0.1 * 0.01781940460205078) 07:16:03 test/integration/test_permissions.py:488: AssertionError 07:16:03 __________________ TestPermissions.testSaveWithNegOneExplicit __________________ 07:16:03 self = <test.integration.test_permissions.TestPermissions object at 0x7f7a1973b100> 07:16:03 @pytest.mark.broken(ticket="11374") 07:16:03 def testSaveWithNegOneExplicit(self): 07:16:03 # Get a user and services 07:16:03 client, user = self.new_client_and_user() 07:16:03 # Create a new object with an explicit group 07:16:03 admin = client.sf.getAdminService() 07:16:03 ec = admin.getEventContext() 07:16:03 grp = omero.model.ExperimenterGroupI(ec.groupId, False) 07:16:03 tag = omero.model.TagAnnotationI() 07:16:03 tag.details.group = grp 07:16:03 # Now try to save it in the -1 context 07:16:03 update = client.sf.getUpdateService() 07:16:03 all_context = {"omero.group": "-1"} 07:16:03 > update.saveAndReturnObject(tag, all_context) 07:16:03 test/integration/test_permissions.py:586: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = c4ae7add-91bd-41f8-81e8-c73cb3cc9fb5/9659cfad-c197-4483-99ce-c967234fa61bomero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 obj = object #0 (::omero::model::TagAnnotation) 07:16:03 { 07:16:03 _id = <nil> 07:16:03 _details = object #1 (::omero::model::Details) 07:16:03 { 07:16:03 ...nksSeq = 07:16:03 { 07:16:03 } 07:16:03 _annotationLinksLoaded = True 07:16:03 _annotationLinksCountPerOwner = {} 07:16:03 _textValue = <nil> 07:16:03 } 07:16:03 _ctx = {'omero.group': '-1'} 07:16:03 def saveAndReturnObject(self, obj, _ctx=None): 07:16:03 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx)) 07:16:03 E omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 E at ome.model.internal.Permissions.<init>(Permissions.java:164) 07:16:03 E at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439) 07:16:03 E at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700) 07:16:03 E at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73) 07:16:03 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855) 07:16:03 E at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313) 07:16:03 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138) 07:16:03 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 E message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: ApiUsageException 07:16:03 ____________________ TestPermissions.testSaveWithNegBadLink ____________________ 07:16:03 self = <test.integration.test_permissions.TestPermissions object at 0x7f7a197b0af0> 07:16:03 @pytest.mark.broken(ticket="11374") 07:16:03 def testSaveWithNegBadLink(self): # ticket:8194 07:16:03 # Get a user and services 07:16:03 client, user = self.new_client_and_user() 07:16:03 admin = client.sf.getAdminService() 07:16:03 group1 = admin.getGroup(admin.getEventContext().groupId) 07:16:03 group2 = self.new_group(experimenters=[user]) 07:16:03 for x in (group1, group2): 07:16:03 x.unload() 07:16:03 admin.getEventContext() # Refresh 07:16:03 # Create a new object with a bad link 07:16:03 image = self.new_image() 07:16:03 image.details.group = group1 07:16:03 tag = omero.model.TagAnnotationI() 07:16:03 tag.details.group = group2 07:16:03 link = image.linkAnnotation(tag) 07:16:03 link.details.group = group2 07:16:03 # Now try to save it in the -1 context 07:16:03 update = client.sf.getUpdateService() 07:16:03 all_context = {"omero.group": "-1"} 07:16:03 # Bad links should be detected and 07:16:03 # a security violation raised. 07:16:03 with pytest.raises(omero.GroupSecurityViolation): 07:16:03 > update.saveAndReturnObject(image, all_context) 07:16:03 test/integration/test_permissions.py:635: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = a57b0b50-8d9c-41c8-9c35-bff42ea83138/1c288436-cc49-4604-9bbe-cafc6daed01eomero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 obj = object #0 (::omero::model::Image) 07:16:03 { 07:16:03 _id = <nil> 07:16:03 _details = object #1 (::omero::model::Details) 07:16:03 { 07:16:03 _...bb6100-4aab-4b18-bc2d-b9dbf2ce12d2 07:16:03 } 07:16:03 _description = object #14 (::omero::RString) 07:16:03 { 07:16:03 _val = 07:16:03 } 07:16:03 } 07:16:03 _ctx = {'omero.group': '-1'} 07:16:03 def saveAndReturnObject(self, obj, _ctx=None): 07:16:03 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx)) 07:16:03 E omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 E at ome.model.internal.Permissions.<init>(Permissions.java:164) 07:16:03 E at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439) 07:16:03 E at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700) 07:16:03 E at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73) 07:16:03 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855) 07:16:03 E at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313) 07:16:03 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138) 07:16:03 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 E message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: ApiUsageException 07:16:03 _______________________ TestPermissions.testSaveBadLink ________________________ 07:16:03 self = <test.integration.test_permissions.TestPermissions object at 0x7f7a197a16d0> 07:16:03 @pytest.mark.broken(ticket="11375") 07:16:03 def testSaveBadLink(self): 07:16:03 # Get a user and services 07:16:03 client, user = self.new_client_and_user() 07:16:03 admin = client.sf.getAdminService() 07:16:03 group1 = admin.getGroup(admin.getEventContext().groupId) 07:16:03 group2 = self.new_group(experimenters=[user]) 07:16:03 for x in (group1, group2): 07:16:03 x.unload() 07:16:03 admin.getEventContext() # Refresh 07:16:03 # Create a new object with a bad link 07:16:03 image = self.new_image() 07:16:03 image.details.group = group1 07:16:03 tag = omero.model.TagAnnotationI() 07:16:03 tag.details.group = group2 07:16:03 link = image.linkAnnotation(tag) 07:16:03 link.details.group = group2 07:16:03 # Now try to save it 07:16:03 update = client.sf.getUpdateService() 07:16:03 # Bad links should be detected and 07:16:03 # a security violation raised. 07:16:03 with pytest.raises(omero.GroupSecurityViolation): 07:16:03 > update.saveAndReturnObject(image) 07:16:03 test/integration/test_permissions.py:664: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = 2954c7cd-6edf-4fdc-afbf-2c148f070228/b03756b4-2c51-4a20-909d-50b2d7477d58omero.api.IUpdate -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 obj = object #0 (::omero::model::Image) 07:16:03 { 07:16:03 _id = <nil> 07:16:03 _details = object #1 (::omero::model::Details) 07:16:03 { 07:16:03 _...5d1f37-7d75-41dd-8fae-ef642b461aa0 07:16:03 } 07:16:03 _description = object #14 (::omero::RString) 07:16:03 { 07:16:03 _val = 07:16:03 } 07:16:03 } 07:16:03 _ctx = None 07:16:03 def saveAndReturnObject(self, obj, _ctx=None): 07:16:03 > return _M_omero.api.IUpdate._op_saveAndReturnObject.invoke(self, ((obj, ), _ctx)) 07:16:03 E omero.SecurityViolation: exception ::omero::SecurityViolation 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.SecurityViolation: You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678 07:16:03 E at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:785) 07:16:03 E at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859) 07:16:03 E at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279) 07:16:03 E at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392) 07:16:03 E at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335) 07:16:03 E at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204) 07:16:03 E at org.hibernate.engine.Cascade.cascade(Cascade.java:161) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.cascadeBeforeSave(AbstractSaveEventListener.java:450) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:336) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859) 07:16:03 E at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279) 07:16:03 E at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392) 07:16:03 E at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335) 07:16:03 E at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204) 07:16:03 E at org.hibernate.engine.Cascade.cascadeCollectionElements(Cascade.java:425) 07:16:03 E at org.hibernate.engine.Cascade.cascadeCollection(Cascade.java:362) 07:16:03 E at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:338) 07:16:03 E at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204) 07:16:03 E at org.hibernate.engine.Cascade.cascade(Cascade.java:161) 07:16:03 E at org.hibernate.event.def.AbstractSaveEventListener.cascadeAfterSave(AbstractSaveEventListener.java:475) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:388) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 E at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 E at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 E at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84) 07:16:03 E at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73) 07:16:03 E at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851) 07:16:03 E at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855) 07:16:03 E at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313) 07:16:03 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138) 07:16:03 E at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357) 07:16:03 E at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 E at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 E at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 E at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 E at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.SecurityViolation 07:16:03 E message = You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IUpdate_ice.py:163: SecurityViolation 07:16:03 ______ TestPermissions.testUseOfRawFileBeanScriptReadCorrectGroupAndUser _______ 07:16:03 self = <test.integration.test_permissions.TestPermissions object at 0x7f7a1973eac0> 07:16:03 @pytest.mark.broken(ticket="11539") 07:16:03 def testUseOfRawFileBeanScriptReadCorrectGroupAndUser(self): 07:16:03 > self.assertValidScript(lambda v: { 07:16:03 'omero.group': str(v.details.group.id.val), 07:16:03 'omero.user': str(v.details.owner.id.val) 07:16:03 }) 07:16:03 test/integration/test_permissions.py:831: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 test/integration/test_permissions.py:813: in assertValidScript 07:16:03 store.setFileId(script.id.val, ctx) 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = 0427e68d-3256-48b1-a35c-d872b24ee0e2/d1f4ca97-56e3-45d5-9fca-3d2656e1ca4domero.api.RawFileStore -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 fileId = 1 07:16:03 _ctx = {'omero.client.uuid': '158203bf-98d9-43e1-94cd-3b07935f302d', 'omero.group': '1', 'omero.session.uuid': '0427e68d-3256-48b1-a35c-d872b24ee0e2', 'omero.user': '0'} 07:16:03 def setFileId(self, fileId, _ctx=None): 07:16:03 > return _M_omero.api.RawFileStore._op_setFileId.invoke(self, ((fileId, ), _ctx)) 07:16:03 E Ice.UnknownException: exception ::Ice::UnknownException 07:16:03 E { 07:16:03 E unknown = ome.conditions.SecurityViolation: User 4735 is not an admin and so cannot set uid to 0 07:16:03 E at ome.security.basic.BasicEventContext.checkAndInitialize(BasicEventContext.java:141) 07:16:03 E at ome.security.basic.CurrentDetails.checkAndInitialize(CurrentDetails.java:317) 07:16:03 E at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:449) 07:16:03 E at ome.security.basic.EventHandler.doLogin(EventHandler.java:210) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:146) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 E at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 E at ome.services.blitz.repo.RepositoryDaoImpl.getFile(RepositoryDaoImpl.java:866) 07:16:03 E at ome.services.blitz.repo.PublicRepositoryI.checkId(PublicRepositoryI.java:823) 07:16:03 E at ome.services.blitz.repo.PublicRepositoryI.fileById(PublicRepositoryI.java:367) 07:16:03 E at omero.grid._RepositoryTie.fileById(_RepositoryTie.java:78) 07:16:03 E at omero.grid._RepositoryDisp.___fileById(_RepositoryDisp.java:393) 07:16:03 E at omero.grid._RepositoryDisp.__dispatch(_RepositoryDisp.java:538) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_RawFileStore_ice.py:200: UnknownException 07:16:03 _________________________ TestRFS.testTicket1961Basic __________________________ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fd400> 07:16:03 @pytest.mark.broken(ticket="11534") 07:16:03 def testTicket1961Basic(self): 07:16:03 ofile = self.file() 07:16:03 rfs = self.client.sf.createRawFileStore() 07:16:03 rfs.setFileId(ofile.id.val) 07:16:03 rfs.write([0, 1, 2, 3], 0, 4) 07:16:03 rfs.close() 07:16:03 > self.check_file(ofile) 07:16:03 test/integration/test_rawfilestore.py:49: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fd400> 07:16:03 ofile = object #0 (::omero::model::OriginalFile) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 6207 07:16:03 } 07:16:03 _d...annotationLinksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 _name = object #26 (::omero::RString) 07:16:03 { 07:16:03 _val = test 07:16:03 } 07:16:03 } 07:16:03 client = <omero.clients.BaseClient object at 0x7f7a07e51250> 07:16:03 def check_file(self, ofile, client=None): 07:16:03 if client is None: 07:16:03 client = self.client 07:16:03 query = client.sf.getQueryService() 07:16:03 ofile = query.get("OriginalFile", ofile.id.val) 07:16:03 assert ofile.size.val != -1 07:16:03 > assert ofile.hash.val != "" 07:16:03 E AssertionError: assert '' != '' 07:16:03 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6207\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754059632\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 test/integration/test_rawfilestore.py:40: AssertionError 07:16:03 ____________________ TestRFS.testTicket1961WithKillSession _____________________ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fd7c0> 07:16:03 @pytest.mark.broken(ticket="11534") 07:16:03 def testTicket1961WithKillSession(self): 07:16:03 ofile = self.file() 07:16:03 grp = self.ctx.groupName 07:16:03 session = self.client.sf.getSessionService().createUserSession( 07:16:03 1 * 1000, 10000, grp) 07:16:03 properties = self.client.getPropertyMap() 07:16:03 c = omero.client(properties) 07:16:03 s = c.joinSession(session.uuid.val) 07:16:03 rfs = s.createRawFileStore() 07:16:03 rfs.setFileId(ofile.id.val) 07:16:03 rfs.write([0, 1, 2, 3], 0, 4) 07:16:03 c.killSession() 07:16:03 > self.check_file(ofile) 07:16:03 test/integration/test_rawfilestore.py:67: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fd7c0> 07:16:03 ofile = object #0 (::omero::model::OriginalFile) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 6208 07:16:03 } 07:16:03 _d...annotationLinksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 _name = object #26 (::omero::RString) 07:16:03 { 07:16:03 _val = test 07:16:03 } 07:16:03 } 07:16:03 client = <omero.clients.BaseClient object at 0x7f7a07e51250> 07:16:03 def check_file(self, ofile, client=None): 07:16:03 if client is None: 07:16:03 client = self.client 07:16:03 query = client.sf.getQueryService() 07:16:03 ofile = query.get("OriginalFile", ofile.id.val) 07:16:03 assert ofile.size.val != -1 07:16:03 > assert ofile.hash.val != "" 07:16:03 E AssertionError: assert '' != '' 07:16:03 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6208\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754059714\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 test/integration/test_rawfilestore.py:40: AssertionError 07:16:03 __________________________ TestRFS.testTicket2161Save __________________________ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fdb80> 07:16:03 @pytest.mark.broken(ticket="11534") 07:16:03 def testTicket2161Save(self): 07:16:03 ofile = self.file() 07:16:03 rfs = self.client.sf.createRawFileStore() 07:16:03 rfs.setFileId(ofile.id.val) 07:16:03 rfs.write([0, 1, 2, 3], 0, 4) 07:16:03 ofile = rfs.save() 07:16:03 > self.check_file(ofile) 07:16:03 test/integration/test_rawfilestore.py:76: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fdb80> 07:16:03 ofile = object #0 (::omero::model::OriginalFile) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 6209 07:16:03 } 07:16:03 _d...annotationLinksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 _name = object #26 (::omero::RString) 07:16:03 { 07:16:03 _val = test 07:16:03 } 07:16:03 } 07:16:03 client = <omero.clients.BaseClient object at 0x7f7a07e51250> 07:16:03 def check_file(self, ofile, client=None): 07:16:03 if client is None: 07:16:03 client = self.client 07:16:03 query = client.sf.getQueryService() 07:16:03 ofile = query.get("OriginalFile", ofile.id.val) 07:16:03 assert ofile.size.val != -1 07:16:03 > assert ofile.hash.val != "" 07:16:03 E AssertionError: assert '' != '' 07:16:03 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6209\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754059760\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 test/integration/test_rawfilestore.py:40: AssertionError 07:16:03 _____________________________ TestRFS.testNoWrite ______________________________ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fdf40> 07:16:03 @pytest.mark.broken(ticket="11534") 07:16:03 def testNoWrite(self): 07:16:03 group = self.new_group(perms="rwr---") 07:16:03 client1 = self.new_client(group=group) 07:16:03 client2 = self.new_client(group=group) 07:16:03 ofile = self.file(client=client1) 07:16:03 rfs = client1.sf.createRawFileStore() 07:16:03 rfs.setFileId(ofile.id.val) 07:16:03 rfs.write(b"0123", 0, 4) 07:16:03 rfs.close() 07:16:03 > self.check_file(ofile, client=client1) 07:16:03 test/integration/test_rawfilestore.py:94: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = <test.integration.test_rawfilestore.TestRFS object at 0x7f7a196fdf40> 07:16:03 ofile = object #0 (::omero::model::OriginalFile) 07:16:03 { 07:16:03 _id = object #1 (::omero::RLong) 07:16:03 { 07:16:03 _val = 6210 07:16:03 } 07:16:03 _d...annotationLinksCountPerOwner = 07:16:03 { 07:16:03 } 07:16:03 _name = object #26 (::omero::RString) 07:16:03 { 07:16:03 _val = test 07:16:03 } 07:16:03 } 07:16:03 client = <omero.clients.BaseClient object at 0x7f7a0f3a3460> 07:16:03 def check_file(self, ofile, client=None): 07:16:03 if client is None: 07:16:03 client = self.client 07:16:03 query = client.sf.getQueryService() 07:16:03 ofile = query.get("OriginalFile", ofile.id.val) 07:16:03 assert ofile.size.val != -1 07:16:03 > assert ofile.hash.val != "" 07:16:03 E AssertionError: assert '' != '' 07:16:03 E + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 E + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6210\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4737\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3681\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754065593\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 test/integration/test_rawfilestore.py:40: AssertionError 07:16:03 __________________ TestRepoRawFileStore.testFailedWriteNoFile __________________ 07:16:03 self = <test.integration.test_reporawfilestore.TestRepoRawFileStore object at 0x7f7a19724400> 07:16:03 @pytest.mark.broken(ticket="11610") 07:16:03 def testFailedWriteNoFile(self): 07:16:03 # Without a single write, no file is produced 07:16:03 rfs = self.repoPrx.file(self.repo_filename, "rw") # create empty file 07:16:03 rfs.close() 07:16:03 rfs = self.repoPrx.file(self.repo_filename, "r") 07:16:03 with pytest.raises(omero.ResourceError): 07:16:03 > rfs.size() 07:16:03 E Failed: DID NOT RAISE <class 'omero.ResourceError'> 07:16:03 test/integration/test_reporawfilestore.py:68: Failed 07:16:03 ______________________ TestScripts.testAutoFillTicket2326 ______________________ 07:16:03 self = <test.integration.test_scripts.TestScripts object at 0x7f7a19691af0> 07:16:03 @pytest.mark.broken(ticket="11539") 07:16:03 def testAutoFillTicket2326(self): 07:16:03 SCRIPT = """if True: 07:16:03 import omero.scripts 07:16:03 import omero.rtypes 07:16:03 client = omero.scripts.client( 07:16:03 "ticket2326", omero.scripts.Long("width", optional=True)) 07:16:03 width = client.getInput("width") 07:16:03 print(width) 07:16:03 client.setOutput( 07:16:03 "noWidthKey", 07:16:03 omero.rtypes.rbool("width" not in client.getInputKeys())) 07:16:03 client.setOutput("widthIsNull", omero.rtypes.rbool(width is None)) 07:16:03 """ 07:16:03 impl = omero.processor.usermode_processor(self.client) 07:16:03 svc = self.client.sf.getScriptService() 07:16:03 try: 07:16:03 scriptID = svc.uploadScript("/test/testAutoFillTicket2326", SCRIPT) 07:16:03 > process = svc.runScript(scriptID, {}, None) 07:16:03 test/integration/test_scripts.py:378: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = b436a087-6105-440c-b1a9-a841e3186003/c8dc2414-6967-46e6-b946-25e3b022bdb1omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 scriptID = 6215, inputs = {}, waitSecs = None, _ctx = None 07:16:03 def runScript(self, scriptID, inputs, waitSecs, _ctx=None): 07:16:03 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx)) 07:16:03 E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 E { 07:16:03 E serverStackTrace = 07:16:03 E serverExceptionClass = 07:16:03 E message = No processor available! [0 response(s)] 07:16:03 E processorCount = 0 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.util.Resources:__init__.py:652 Starting 07:16:03 INFO omero.processor.ProcessorI:processor.py:814 Registering processor "4?!*d)kT%7RTBV@EBZhS/UsermodeProcessor-44947f69-a654-4e8c-970d-dbccea9497df" -t -e 1.1:tcp -h 127.0.0.1 -p 39915 -t 60000 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4954 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4954 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4955 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4955 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up 07:16:03 INFO omero.processor.ProcessorI:__init__.py:599 Done 07:16:03 ______________ TestScripts.testParamLoadingPerformanceTicket2285 _______________ 07:16:03 self = <test.integration.test_scripts.TestScripts object at 0x7f7a19691eb0> 07:16:03 @pytest.mark.broken(reason="Minor performance failure", ticket="11539") 07:16:03 def testParamLoadingPerformanceTicket2285(self): 07:16:03 root_client = self.new_client(system=True) 07:16:03 svc = root_client.sf.getScriptService() 07:16:03 SCRIPT = """if True: 07:16:03 import omero.model as OM 07:16:03 import omero.rtypes as OR 07:16:03 import omero.scripts as OS 07:16:03 c = OS.client("perf test", 07:16:03 OS.Long("a", min=0, max=5), 07:16:03 OS.String("b", values=("a","b","c")), 07:16:03 OS.List("c").ofType(OM.ImageI)) 07:16:03 """ 07:16:03 upload_time, scriptID = self.timeit( 07:16:03 svc.uploadOfficialScript, "/test/perf%s.py" % self.uuid(), SCRIPT) 07:16:03 impl = omero.processor.usermode_processor(root_client) 07:16:03 try: 07:16:03 params_time, params = self.timeit(svc.getParams, scriptID) 07:16:03 assert params_time < (upload_time / 10), \ 07:16:03 "upload_time(%s) <= 10 * params_time(%s)!" % \ 07:16:03 (upload_time, params_time) 07:16:03 assert params_time < 0.1, "params_time(%s) >= 0.01 !" % params_time 07:16:03 > run_time, process = self.timeit( 07:16:03 svc.runScript, scriptID, wrap({"a": int(5)}).val, None) 07:16:03 test/integration/test_scripts.py:417: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero/testlib/__init__.py:612: in timeit 07:16:03 rv = func(*args, **kwargs) 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = a03e0bf2-270e-4fda-8cbe-d819f2e448db/1c5b6717-5e25-405b-8727-afca2b3ff2f2omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 scriptID = 6216, inputs = {'a': object #0 (::omero::RInt) 07:16:03 { 07:16:03 _val = 5 07:16:03 }} 07:16:03 waitSecs = None, _ctx = None 07:16:03 def runScript(self, scriptID, inputs, waitSecs, _ctx=None): 07:16:03 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx)) 07:16:03 E omero.ValidationException: exception ::omero::ValidationException 07:16:03 E { 07:16:03 E serverStackTrace = 07:16:03 E serverExceptionClass = 07:16:03 E message = Invalid parameters: 07:16:03 E WRONG TYPE for "a": <class 'omero.rtypes.RIntI'> != <class 'omero.rtypes.RLongI'> 07:16:03 E 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: ValidationException 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4741, group=3684, script=4956 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 858, in willAccept 07:16:03 handle.close() 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_ServicesF_ice.py", line 287, in close 07:16:03 return _M_omero.api.StatefulServiceInterface._op_close.invoke(self, ((), _ctx)) 07:16:03 omero.SecurityViolation: exception ::omero::SecurityViolation 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.SecurityViolation: User 4740 is not a member of group 3684 and cannot login 07:16:03 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:514) 07:16:03 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:146) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216) 07:16:03 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy92.close(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor527.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy92.close(Unknown Source) 07:16:03 at ome.services.blitz.impl.AbstractCloseableAmdServant.close_async(AbstractCloseableAmdServant.java:90) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor558.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy93.close_async(Unknown Source) 07:16:03 at omero.api._JobHandleTie.close_async(_JobHandleTie.java:144) 07:16:03 at omero.api._StatefulServiceInterfaceDisp.___close(_StatefulServiceInterfaceDisp.java:185) 07:16:03 at omero.api._JobHandleDisp.__dispatch(_JobHandleDisp.java:597) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.SecurityViolation 07:16:03 message = User 4740 is not a member of group 3684 and cannot login 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'bool'> 07:16:03 INFO omero.util.Resources:__init__.py:652 Starting 07:16:03 INFO omero.processor.ProcessorI:processor.py:814 Registering processor jrHWfd;[]\"]IZu$)Ck1M/UsermodeProcessor-3ae098f0-ddab-4fe3-8067-85c5ba120190 -t -e 1.1:tcp -h 127.0.0.1 -p 39915 -t 60000 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4741, group=3684, script=4957 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 858, in willAccept 07:16:03 handle.close() 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_ServicesF_ice.py", line 287, in close 07:16:03 return _M_omero.api.StatefulServiceInterface._op_close.invoke(self, ((), _ctx)) 07:16:03 omero.SecurityViolation: exception ::omero::SecurityViolation 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.SecurityViolation: User 4740 is not a member of group 3684 and cannot login 07:16:03 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:514) 07:16:03 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:146) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216) 07:16:03 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy92.close(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor527.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy92.close(Unknown Source) 07:16:03 at ome.services.blitz.impl.AbstractCloseableAmdServant.close_async(AbstractCloseableAmdServant.java:90) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor558.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy93.close_async(Unknown Source) 07:16:03 at omero.api._JobHandleTie.close_async(_JobHandleTie.java:144) 07:16:03 at omero.api._StatefulServiceInterfaceDisp.___close(_StatefulServiceInterfaceDisp.java:185) 07:16:03 at omero.api._JobHandleDisp.__dispatch(_JobHandleDisp.java:597) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.SecurityViolation 07:16:03 message = User 4740 is not a member of group 3684 and cannot login 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4741, group=3684, script=4957 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'bool'> 07:16:03 INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up 07:16:03 INFO omero.processor.ProcessorI:__init__.py:599 Done 07:16:03 _____________________________ TestScripts.test3527 _____________________________ 07:16:03 self = <test.integration.test_scripts.TestScripts object at 0x7f7a196fd190> 07:16:03 @pytest.mark.broken(ticket="11610") 07:16:03 def test3527(self): 07:16:03 SCRIPT = """if True: 07:16:03 import omero.scripts 07:16:03 import omero.rtypes 07:16:03 client = omero.scripts.client("ticket3527", \ 07:16:03 omero.scripts.Long("gid", out=True)) 07:16:03 ec = client.sf.getAdminService().getEventContext() 07:16:03 gid = ec.groupId 07:16:03 client.setOutput("gid", omero.rtypes.rlong(gid)) 07:16:03 """ 07:16:03 impl = omero.processor.usermode_processor(self.client) 07:16:03 svc = self.client.sf.getScriptService() 07:16:03 try: 07:16:03 scriptID = svc.uploadScript("/test/test3527", SCRIPT) 07:16:03 > process = svc.runScript(scriptID, {}, None) 07:16:03 test/integration/test_scripts.py:521: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = b436a087-6105-440c-b1a9-a841e3186003/c8dc2414-6967-46e6-b946-25e3b022bdb1omero.api.IScript -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 scriptID = 6218, inputs = {}, waitSecs = None, _ctx = None 07:16:03 def runScript(self, scriptID, inputs, waitSecs, _ctx=None): 07:16:03 > return _M_omero.api.IScript._op_runScript.invoke(self, ((scriptID, inputs, waitSecs), _ctx)) 07:16:03 E omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 E { 07:16:03 E serverStackTrace = 07:16:03 E serverExceptionClass = 07:16:03 E message = No processor available! [0 response(s)] 07:16:03 E processorCount = 0 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py:935: NoProcessorAvailable 07:16:03 ------------------------------ Captured log call ------------------------------- 07:16:03 INFO omero.util.Resources:__init__.py:652 Starting 07:16:03 INFO omero.processor.ProcessorI:processor.py:814 Registering processor "4?!*d)kT%7RTBV@EBZhS/UsermodeProcessor-9ce8d19a-594a-4539-a705-5687053b1e34" -t -e 1.1:tcp -h 127.0.0.1 -p 39915 -t 60000 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4958 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 INFO omero.remote:decorators.py:70 Meth: ProcessorI.willAccept 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 ERROR omero.processor.ProcessorI:processor.py:861 File lookup failed: user=4740, group=3683, script=4959 07:16:03 Traceback (most recent call last): 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 857, in willAccept 07:16:03 file, handle = self.lookup(scriptContext) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 829, in lookup 07:16:03 file = prx.validateScript(job, self.accepts_list) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/processor.py", line 40, in handler 07:16:03 return func(*args, **kwargs) 07:16:03 File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero_api_IScript_ice.py", line 1065, in validateScript 07:16:03 return _M_omero.api.IScript._op_validateScript.invoke(self, ((j, acceptsList), _ctx)) 07:16:03 omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: Found wrong number of files: [] 07:16:03 at ome.services.blitz.impl.ScriptI$15$1.doWork(ScriptI.java:577) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor267.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.services.util.Executor$Impl$Interceptor.invoke(Executor.java:568) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.impl.ScriptI$15.call(ScriptI.java:570) 07:16:03 at ome.services.throttling.Callback2.run(Callback2.java:43) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.safeRunnableCall(InThreadThrottlingStrategy.java:80) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.safeRunnableCall(AbstractAmdServant.java:159) 07:16:03 at ome.services.blitz.impl.ScriptI.validateScript_async(ScriptI.java:553) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor597.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy94.validateScript_async(Unknown Source) 07:16:03 at omero.api._IScriptTie.validateScript_async(_IScriptTie.java:144) 07:16:03 at omero.api._IScriptDisp.___validateScript(_IScriptDisp.java:704) 07:16:03 at omero.api._IScriptDisp.__dispatch(_IScriptDisp.java:819) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = Found wrong number of files: [] 07:16:03 } 07:16:03 INFO omero.remote:decorators.py:75 Rslt: <class 'NoneType'> 07:16:03 INFO omero.processor.ProcessorI:__init__.py:597 Cleaning up 07:16:03 INFO omero.processor.ProcessorI:__init__.py:599 Done 07:16:03 _______________ TestThumbnailPerms.testPrivate10618RootWithNoCtx _______________ 07:16:03 self = <test.integration.test_thumbnailPerms.TestThumbnailPerms object at 0x7f7a196473d0> 07:16:03 @pytest.mark.broken(reason="requires thumbnail work") 07:16:03 def testPrivate10618RootWithNoCtx(self): 07:16:03 """ 07:16:03 This would require the server to try omero.group=-1 07:16:03 for the user. 07:16:03 """ 07:16:03 group = self.new_group(perms="rw----") 07:16:03 > self.assert10618(group, self.root, True) 07:16:03 test/integration/test_thumbnailPerms.py:256: 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 test/integration/test_thumbnailPerms.py:217: in assert10618 07:16:03 s = tb_prx.getThumbnailByLongestSideSet(rint(16), [pId], *ctx) 07:16:03 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 07:16:03 self = 53fad1a3-6864-402b-8e17-7dc9c63f272b/5635ebfa-a5f1-4f55-8bb3-15cf85bac0bbomero.api.ThumbnailStore -t -e 1.1:tcp -h 172.18.0.10 -p 45809 -t 60000 07:16:03 size = object #0 (::omero::RInt) 07:16:03 { 07:16:03 _val = 16 07:16:03 }, pixelsIds = [2901] 07:16:03 _ctx = None 07:16:03 def getThumbnailByLongestSideSet(self, size, pixelsIds, _ctx=None): 07:16:03 > return _M_omero.api.ThumbnailStore._op_getThumbnailByLongestSideSet.invoke(self, ((size, pixelsIds), _ctx)) 07:16:03 E omero.ResourceError: exception ::omero::ResourceError 07:16:03 E { 07:16:03 E serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it. 07:16:03 E at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749) 07:16:03 E at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388) 07:16:03 E at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor3879.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216) 07:16:03 E at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 E at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 E at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor3879.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor3884.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 E at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 E at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 E at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 E at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83) 07:16:03 E at jdk.internal.reflect.GeneratedMethodAccessor3883.invoke(Unknown Source) 07:16:03 E at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 E at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 E at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 E at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 E at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 E at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 E at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source) 07:16:03 E at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132) 07:16:03 E at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743) 07:16:03 E at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088) 07:16:03 E at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 E at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 E at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 E at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 E at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 E at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 E at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 E at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 E 07:16:03 E serverExceptionClass = ome.conditions.ResourceError 07:16:03 E message = Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it. 07:16:03 E } 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/omero_api_ThumbnailStore_ice.py:730: ResourceError 07:16:03 ___________________________ TestTickets2000.test1184 ___________________________ 07:16:03 self = <test.integration.test_tickets2000.TestTickets2000 object at 0x7f7a1961a0a0> 07:16:03 @pytest.mark.broken(ticket="11543") 07:16:03 def test1184(self): 07:16:03 uuid = self.uuid() 07:16:03 client = self.new_client(perms="rw----") 07:16:03 query = client.sf.getQueryService() 07:16:03 update = client.sf.getUpdateService() 07:16:03 admin = client.sf.getAdminService() 07:16:03 cont = client.sf.getContainerService() 07:16:03 ds = self.new_dataset(name='test1184-ds-%s' % (uuid)) 07:16:03 for i in range(1, 2001): 07:16:03 img = self.new_image(name='img1184-%s' % (uuid)) 07:16:03 ds.linkImage(img) 07:16:03 ds = update.saveAndReturnObject(ds) 07:16:03 c = cont.getCollectionCount( 07:16:03 ds.__class__.__name__, ("imageLinks"), [ds.id.val], None) 07:16:03 assert c[ds.id.val] == 2000 07:16:03 page = 1 07:16:03 p = omero.sys.Parameters() 07:16:03 p.map = {} 07:16:03 p.map["eid"] = rlong(admin.getEventContext().userId) 07:16:03 p.map["oid"] = rlong(ds.id.val) 07:16:03 if page is not None: 07:16:03 f = omero.sys.Filter() 07:16:03 f.limit = rint(24) 07:16:03 f.offset = rint((int(page) - 1) * 24) 07:16:03 p.theFilter = f 07:16:03 sql = "select im from Image im join fetch im.details.owner " \ 07:16:03 "join fetch im.details.group left outer join fetch " \ 07:16:03 "im.datasetLinks dil left outer join fetch dil.parent d " \ 07:16:03 "where d.id = :oid and im.details.owner.id=:eid " \ 07:16:03 "order by im.id asc" 07:16:03 start = time.time() 07:16:03 res = query.findAllByQuery(sql, p) 07:16:03 assert 24 == len(res) 07:16:03 end = time.time() 07:16:03 elapsed = end - start 07:16:03 > assert elapsed < 3.0, \ 07:16:03 "Expected the test to complete in < 3 seconds, took: %f" % elapsed 07:16:03 E AssertionError: Expected the test to complete in < 3 seconds, took: 11.561142 07:16:03 E assert 11.561142206192017 < 3.0 07:16:03 test/integration/test_tickets2000.py:370: AssertionError 07:16:03 =============================== warnings summary =============================== 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/Ice.py:14 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/Ice.py:14: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses 07:16:03 import sys, string, imp, os, threading, warnings, datetime 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:241: RemovedInDjango50Warning: The default value of USE_TZ will change from False to True in Django 5.0. Set USE_TZ to False in your project settings if you want to keep the current default behavior. 07:16:03 warnings.warn( 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/django/conf/__init__.py:289: RemovedInDjango51Warning: The STATICFILES_STORAGE setting is deprecated. Use STORAGES instead. 07:16:03 warnings.warn(STATICFILES_STORAGE_DEPRECATED_MSG, RemovedInDjango51Warning) 07:16:03 ../../../../.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/pipeline/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 07:16:03 from pkg_resources import DistributionNotFound, get_distribution 07:16:03 OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] 07:16:03 OmeroPy/test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/plugins/sessions.py:176: DeprecationWarning: OMERO_SESSION_DIR is deprecated. Use OMERO_SESSIONDIR instead. 07:16:03 warnings.warn( 07:16:03 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory 07:16:03 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory 07:16:03 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript 07:16:03 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript 07:16:03 OmeroPy/test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/gateway/__init__.py:4810: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead 07:16:03 logger.warn("%s on %s to <%s> %s(%r, %r)", 07:16:03 OmeroPy/test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx 07:16:03 /home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.9/site-packages/omero/util/script_utils.py:1093: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. 07:16:03 converted_plane = byte_swapped_plane.tostring() 07:16:03 -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 07:16:03 - generated xml file: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroPy/target/reports/broken/junit-results.xml - 07:16:03 =========================== short test summary info ============================ 07:16:03 FAILED test/integration/clitest/test_fs.py::TestFS::testRenameAdminOnly - AssertionError: assert False 07:16:03 + where False = <built-in method endswith of str object at 0x7f7a0cfc5260>('SecurityViolation: Admins only!\n') 07:16:03 + where <built-in method endswith of str object at 0x7f7a0cfc5260> = 'disabled since OMERO 5.4.7 due to Pixels.path bug\n'.endswith 07:16:03 FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Dataset-test.fake--d] - omero.cli.NonZeroReturnCode: assert failed 07:16:03 FAILED test/integration/clitest/test_import.py::TestImport::testTargetInDifferentGroup[Screen-SPW&plates=1&plateRows=1&plateCols=1&fields=1&plateAcqs=1.fake--r] - omero.cli.NonZeroReturnCode: assert failed 07:16:03 FAILED test/integration/gatewaytest/test_multi_group.py::TestHistory::testCreateHistory - AssertionError: Logs count should match number of objects 07:16:03 assert 1 == 0 07:16:03 FAILED test/integration/gatewaytest/test_multi_group.py::TestScript::testRunScript - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 { 07:16:03 serverStackTrace = 07:16:03 serverExceptionClass = 07:16:03 message = No processor available! [0 response(s)] 07:16:03 processorCount = 0 07:16:03 } 07:16:03 FAILED test/integration/gatewaytest/test_performance.py::TestPerformance::testListFileAnnotations - AssertionError: Blitz listFileAnnotations() should be faster than getObjects('FileAnnotation') 07:16:03 assert 0.3212752342224121 < 0.16168785095214844 07:16:03 FAILED test/integration/gatewaytest/test_user.py::TestUser::testCrossGroupRead - assert not 2719 in [2718, 1, 2730, 2719, 2780] 07:16:03 + where 2719 = getId() 07:16:03 + where getId = <_ExperimenterGroupWrapper id=2719>.getId 07:16:03 + and [2718, 1, 2730, 2719, 2780] = object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 9b756529-dc91-4678-b52c-11c942c2d2aa\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n}.memberOfGroups 07:16:03 + where object #0 (::omero::sys::EventContext)\n{\n shareId = -1\n sessionId = 10312\n sessionUuid = 9b756529-dc91-4678-b52c-11c942c2d2aa\n userId = 3728\n userName = weblitz_test_user\n sudoerId = <nil>\n sudoerName = <nil>\n groupId = 2718\n groupName = weblitz_test_user_group\n isAdmin = False\n adminPrivileges = \n {\n }\n eventId = -1\n eventType = Internal\n memberOfGroups = \n {\n [0] = 2718\n [1] = 1\n [2] = 2730\n [3] = 2719\n [4] = 2780\n }\n leaderOfGroups = \n {\n }\n groupPermissions = object #1 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n} = getEventContext() 07:16:03 + where getEventContext = <omero.gateway._BlitzGateway object at 0x7f7a0a5e3a90>.getEventContext 07:16:03 + where <omero.gateway._BlitzGateway object at 0x7f7a0a5e3a90> = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7f7a0c9a12e0>.gateway 07:16:03 FAILED test/integration/scriptstest/test_ping.py::TestPing::testProcessCallback - assert 0 > 0 07:16:03 + where 0 = len([]) 07:16:03 + where [] = object #0 (::omero::grid::ProcessCallback)\n{\n}.finish 07:16:03 FAILED test/integration/scriptstest/test_repo.py::TestScriptRepo::testGetGroupScripts - assert 6201 in [] 07:16:03 FAILED test/integration/tablestest/test_service.py::TestTables::test2098 - AttributeError: type object 'path' has no attribute 'path' 07:16:03 FAILED test/integration/tablestest/test_service.py::TestTables::testReadOnlyFile - AttributeError: 'TestTables' object has no attribute 'unique_dir' 07:16:03 FAILED test/integration/tablestest/test_service.py::TestTables::testReadEqual - assert [1] == [1, 2, 3, 4, 5] 07:16:03 Right contains 4 more items, first extra item: 2 07:16:03 Full diff: 07:16:03 [ 07:16:03 1, 07:16:03 - 2, 07:16:03 - 3, 07:16:03 - 4, 07:16:03 - 5, 07:16:03 ] 07:16:03 FAILED test/integration/tablestest/test_service.py::TestTables::testReadOutOfRange - assert [4] == [-1, 0, 1, 2, 3, 4] 07:16:03 At index 0 diff: 4 != -1 07:16:03 Right contains 5 more items, first extra item: 0 07:16:03 Full diff: 07:16:03 [ 07:16:03 - -1, 07:16:03 - 0, 07:16:03 - 1, 07:16:03 - 2, 07:16:03 - 3, 07:16:03 4, 07:16:03 ] 07:16:03 FAILED test/integration/test_admin.py::TestAdmin::testChangePasswordWhenUnset - omero.SecurityViolation: exception ::omero::SecurityViolation 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.SecurityViolation: Old password is invalid 07:16:03 at ome.logic.AdminImpl.changePasswordWithOldPassword(AdminImpl.java:1253) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.changePasswordWithOldPassword(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.changePasswordWithOldPassword(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.AdminI.changePasswordWithOldPassword_async(AdminI.java:144) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 07:16:03 at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy97.changePasswordWithOldPassword_async(Unknown Source) 07:16:03 at omero.api._IAdminTie.changePasswordWithOldPassword_async(_IAdminTie.java:112) 07:16:03 at omero.api._IAdminDisp.___changePasswordWithOldPassword(_IAdminDisp.java:1977) 07:16:03 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2229) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.SecurityViolation 07:16:03 message = Old password is invalid 07:16:03 } 07:16:03 FAILED test/integration/test_admin.py::TestAdmin::test9193 - omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ValidationException: experimenter cannot be a member of only the 'user' group, a different default group is also required 07:16:03 at ome.logic.AdminImpl.removeGroups(AdminImpl.java:813) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor627.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.removeGroups(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor627.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy96.removeGroups(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3269.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.AdminI.removeGroups_async(AdminI.java:318) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3268.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy97.removeGroups_async(Unknown Source) 07:16:03 at omero.api._IAdminTie.removeGroups_async(_IAdminTie.java:312) 07:16:03 at omero.api._IAdminDisp.___removeGroups(_IAdminDisp.java:1621) 07:16:03 at omero.api._IAdminDisp.__dispatch(_IAdminDisp.java:2377) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ValidationException 07:16:03 message = experimenter cannot be a member of only the 'user' group, a different default group is also required 07:16:03 } 07:16:03 FAILED test/integration/test_files.py::TestFiles::testUploadDifferentSizeTicket2337 - omero.OptimisticLockException: exception ::omero::OptimisticLockException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.OptimisticLockException: You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6206 from ome.model.meta.Event:Id_124677 to ome.model.meta.Event:Id_124676 07:16:03 You may need to reload the object before continuing. 07:16:03 at ome.security.basic.OmeroInterceptor.managedEvent(OmeroInterceptor.java:1201) 07:16:03 at ome.security.basic.OmeroInterceptor.checkManagedDetails(OmeroInterceptor.java:963) 07:16:03 at ome.security.basic.OmeroInterceptor.resetDetails(OmeroInterceptor.java:465) 07:16:03 at ome.security.basic.OmeroInterceptor.onFlushDirty(OmeroInterceptor.java:239) 07:16:03 at org.hibernate.event.def.DefaultFlushEntityEventListener.invokeInterceptor(DefaultFlushEntityEventListener.java:372) 07:16:03 at org.hibernate.event.def.DefaultFlushEntityEventListener.handleInterception(DefaultFlushEntityEventListener.java:349) 07:16:03 at org.hibernate.event.def.DefaultFlushEntityEventListener.scheduleUpdate(DefaultFlushEntityEventListener.java:287) 07:16:03 at org.hibernate.event.def.DefaultFlushEntityEventListener.onFlushEntity(DefaultFlushEntityEventListener.java:155) 07:16:03 at org.hibernate.event.def.AbstractFlushingEventListener.flushEntities(AbstractFlushingEventListener.java:219) 07:16:03 at org.hibernate.event.def.AbstractFlushingEventListener.flushEverythingToExecutions(AbstractFlushingEventListener.java:99) 07:16:03 at org.hibernate.event.def.DefaultFlushEventListener.onFlush(DefaultFlushEventListener.java:50) 07:16:03 at org.hibernate.impl.SessionImpl.flush(SessionImpl.java:1216) 07:16:03 at ome.logic.UpdateImpl.afterUpdate(UpdateImpl.java:342) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:358) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.OptimisticLockException 07:16:03 message = You are not authorized to change the update event for ome.model.core.OriginalFile:Id_6206 from ome.model.meta.Event:Id_124677 to ome.model.meta.Event:Id_124676 07:16:03 You may need to reload the object before continuing. 07:16:03 backOff = 0 07:16:03 } 07:16:03 FAILED test/integration/test_ishare.py::TestIShare::test1172 - assert 0 == 1 07:16:03 + where 0 = len([]) 07:16:03 FAILED test/integration/test_itimeline.py::TestITimeline::test1225 - assert 6 == 10 07:16:03 + where 6 = len({1908, 1944, 1995, 9450, 13072, 41480}) 07:16:03 FAILED test/integration/test_permissions.py::TestPermissions::test3136 - AssertionError: elapsed1=0.03419137001037598, elapsed2=0.01781940460205078 07:16:03 assert 0.03419137001037598 < (0.1 * 0.01781940460205078) 07:16:03 FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegOneExplicit - omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 at ome.model.internal.Permissions.<init>(Permissions.java:164) 07:16:03 at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439) 07:16:03 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700) 07:16:03 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73) 07:16:03 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855) 07:16:03 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313) 07:16:03 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138) 07:16:03 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 } 07:16:03 FAILED test/integration/test_permissions.py::TestPermissions::testSaveWithNegBadLink - omero.ApiUsageException: exception ::omero::ApiUsageException 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ApiUsageException: No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 at ome.model.internal.Permissions.<init>(Permissions.java:164) 07:16:03 at ome.security.basic.CurrentDetails.createDetails(CurrentDetails.java:439) 07:16:03 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:700) 07:16:03 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73) 07:16:03 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855) 07:16:03 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313) 07:16:03 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138) 07:16:03 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ApiUsageException 07:16:03 message = No valid permissions available! DUMMY permissions are not intended for copying. Make sure that you have not passed omero.group=-1 for a save without context 07:16:03 } 07:16:03 FAILED test/integration/test_permissions.py::TestPermissions::testSaveBadLink - omero.SecurityViolation: exception ::omero::SecurityViolation 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.SecurityViolation: You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678 07:16:03 at ome.security.basic.OmeroInterceptor.newTransientDetails(OmeroInterceptor.java:785) 07:16:03 at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:187) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:413) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:292) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:203) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:143) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.saveTransientEntity(DefaultMergeEventListener.java:415) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:341) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859) 07:16:03 at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279) 07:16:03 at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392) 07:16:03 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335) 07:16:03 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204) 07:16:03 at org.hibernate.engine.Cascade.cascade(Cascade.java:161) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.cascadeBeforeSave(AbstractSaveEventListener.java:450) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:336) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:877) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:859) 07:16:03 at org.hibernate.engine.CascadingAction$6.cascade(CascadingAction.java:279) 07:16:03 at org.hibernate.engine.Cascade.cascadeToOne(Cascade.java:392) 07:16:03 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:335) 07:16:03 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204) 07:16:03 at org.hibernate.engine.Cascade.cascadeCollectionElements(Cascade.java:425) 07:16:03 at org.hibernate.engine.Cascade.cascadeCollection(Cascade.java:362) 07:16:03 at org.hibernate.engine.Cascade.cascadeAssociation(Cascade.java:338) 07:16:03 at org.hibernate.engine.Cascade.cascadeProperty(Cascade.java:204) 07:16:03 at org.hibernate.engine.Cascade.cascade(Cascade.java:161) 07:16:03 at org.hibernate.event.def.AbstractSaveEventListener.cascadeAfterSave(AbstractSaveEventListener.java:475) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:388) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:303) 07:16:03 at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:62) 07:16:03 at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:154) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:258) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:87) 07:16:03 at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84) 07:16:03 at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:73) 07:16:03 at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:867) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:851) 07:16:03 at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:855) 07:16:03 at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:313) 07:16:03 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:138) 07:16:03 at ome.logic.UpdateImpl$2.run(UpdateImpl.java:135) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:357) 07:16:03 at ome.logic.UpdateImpl.doAction(UpdateImpl.java:349) 07:16:03 at ome.logic.UpdateImpl.saveAndReturnObject(UpdateImpl.java:135) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor609.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy101.saveAndReturnObject(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor683.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.UpdateI.saveAndReturnObject_async(UpdateI.java:62) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor682.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy102.saveAndReturnObject_async(Unknown Source) 07:16:03 at omero.api._IUpdateTie.saveAndReturnObject_async(_IUpdateTie.java:92) 07:16:03 at omero.api._IUpdateDisp.___saveAndReturnObject(_IUpdateDisp.java:229) 07:16:03 at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:423) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.SecurityViolation 07:16:03 message = You are not authorized to set the ExperimenterGroup for ome.model.annotations.TagAnnotation:Id_41635 to ome.model.meta.ExperimenterGroup:Id_3678 07:16:03 } 07:16:03 FAILED test/integration/test_permissions.py::TestPermissions::testUseOfRawFileBeanScriptReadCorrectGroupAndUser - Ice.UnknownException: exception ::Ice::UnknownException 07:16:03 { 07:16:03 unknown = ome.conditions.SecurityViolation: User 4735 is not an admin and so cannot set uid to 0 07:16:03 at ome.security.basic.BasicEventContext.checkAndInitialize(BasicEventContext.java:141) 07:16:03 at ome.security.basic.CurrentDetails.checkAndInitialize(CurrentDetails.java:317) 07:16:03 at ome.security.basic.BasicSecuritySystem.loadEventContext(BasicSecuritySystem.java:449) 07:16:03 at ome.security.basic.EventHandler.doLogin(EventHandler.java:210) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:146) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:119) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy74.doWork(Unknown Source) 07:16:03 at ome.services.util.Executor$Impl.execute(Executor.java:447) 07:16:03 at ome.services.blitz.repo.RepositoryDaoImpl.getFile(RepositoryDaoImpl.java:866) 07:16:03 at ome.services.blitz.repo.PublicRepositoryI.checkId(PublicRepositoryI.java:823) 07:16:03 at ome.services.blitz.repo.PublicRepositoryI.fileById(PublicRepositoryI.java:367) 07:16:03 at omero.grid._RepositoryTie.fileById(_RepositoryTie.java:78) 07:16:03 at omero.grid._RepositoryDisp.___fileById(_RepositoryDisp.java:393) 07:16:03 at omero.grid._RepositoryDisp.__dispatch(_RepositoryDisp.java:538) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 } 07:16:03 FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961Basic - AssertionError: assert '' != '' 07:16:03 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6207\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754059632\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket1961WithKillSession - AssertionError: assert '' != '' 07:16:03 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6208\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754059714\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 FAILED test/integration/test_rawfilestore.py::TestRFS::testTicket2161Save - AssertionError: assert '' != '' 07:16:03 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6209\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4736\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3680\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -120\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754059760\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 FAILED test/integration/test_rawfilestore.py::TestRFS::testNoWrite - AssertionError: assert '' != '' 07:16:03 + where '' = object #0 (::omero::RString)\n{\n _val = \n}.val 07:16:03 + where object #0 (::omero::RString)\n{\n _val = \n} = object #0 (::omero::model::OriginalFile)\n{\n _id = object #1 (::omero::RLong)\n {\n _val = 6210\n }\n _details = object #2 (::omero::model::Details)\n {\n _owner = object #3 (::omero::model::Experimenter)\n {\n _id = object #4 (::omero::RLong)\n {\n _val = 4737\n }\n _details = <nil>\n _loaded = False\n _version = <nil>\n _groupExperimenterMapSeq = \n {\n }\n _groupExperimenterMapLoaded = False\n _omeName = <nil>\n _firstName = <nil>\n _middleName = <nil>\n _lastName = <nil>\n _institution = <nil>\n _ldap = <nil>\n _email = <nil>\n _config = \n {\n }\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n }\n _group = object #5 (::omero::model::ExperimenterGroup)\n {\n _id = object #6 (::omero::RLong)\n {\n _val = 3681\n }\n _details = object #7 (::... }\n groupPermissions = object #20 (::omero::model::Permissions)\n {\n _restrictions = \n {\n }\n _extendedRestrictions = \n {\n }\n _perm1 = -56\n }\n }\n }\n _loaded = True\n _version = <nil>\n _pixelsFileMapsSeq = \n {\n }\n _pixelsFileMapsLoaded = False\n _pixelsFileMapsCountPerOwner = \n {\n }\n _path = object #21 (::omero::RString)\n {\n _val = /tmp/test\n }\n _repo = <nil>\n _size = object #22 (::omero::RLong)\n {\n _val = 4\n }\n _atime = <nil>\n _mtime = object #23 (::omero::RTime)\n {\n _val = 1729754065593\n }\n _ctime = <nil>\n _hasher = <nil>\n _hash = object #24 (::omero::RString)\n {\n _val = \n }\n _mimetype = object #25 (::omero::RString)\n {\n _val = application/octet-stream\n }\n _filesetEntriesSeq = \n {\n }\n _filesetEntriesLoaded = True\n _annotationLinksSeq = \n {\n }\n _annotationLinksLoaded = False\n _annotationLinksCountPerOwner = \n {\n }\n _name = object #26 (::omero::RString)\n {\n _val = test\n }\n}.hash 07:16:03 FAILED test/integration/test_reporawfilestore.py::TestRepoRawFileStore::testFailedWriteNoFile - Failed: DID NOT RAISE <class 'omero.ResourceError'> 07:16:03 FAILED test/integration/test_scripts.py::TestScripts::testAutoFillTicket2326 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 { 07:16:03 serverStackTrace = 07:16:03 serverExceptionClass = 07:16:03 message = No processor available! [0 response(s)] 07:16:03 processorCount = 0 07:16:03 } 07:16:03 FAILED test/integration/test_scripts.py::TestScripts::testParamLoadingPerformanceTicket2285 - omero.ValidationException: exception ::omero::ValidationException 07:16:03 { 07:16:03 serverStackTrace = 07:16:03 serverExceptionClass = 07:16:03 message = Invalid parameters: 07:16:03 WRONG TYPE for "a": <class 'omero.rtypes.RIntI'> != <class 'omero.rtypes.RLongI'> 07:16:03 } 07:16:03 FAILED test/integration/test_scripts.py::TestScripts::test3527 - omero.NoProcessorAvailable: exception ::omero::NoProcessorAvailable 07:16:03 { 07:16:03 serverStackTrace = 07:16:03 serverExceptionClass = 07:16:03 message = No processor available! [0 response(s)] 07:16:03 processorCount = 0 07:16:03 } 07:16:03 FAILED test/integration/test_thumbnailPerms.py::TestThumbnailPerms::testPrivate10618RootWithNoCtx - omero.ResourceError: exception ::omero::ResourceError 07:16:03 { 07:16:03 serverStackTrace = ome.conditions.ResourceError: Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it. 07:16:03 at ome.services.ThumbnailCtx.isExtendedGraphCritical(ThumbnailCtx.java:749) 07:16:03 at ome.services.ThumbnailCtx.createAndPrepareMissingRenderingSettings(ThumbnailCtx.java:388) 07:16:03 at ome.services.ThumbnailBean.getThumbnailByLongestSideSet(ThumbnailBean.java:1003) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3879.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.EventHandler.invoke(EventHandler.java:154) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.SessionHandler.doStateful(SessionHandler.java:216) 07:16:03 at ome.tools.hibernate.SessionHandler.invoke(SessionHandler.java:200) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99) 07:16:03 at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:282) 07:16:03 at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:249) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:121) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3879.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:93) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy113.getThumbnailByLongestSideSet(Unknown Source) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3884.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:172) 07:16:03 at ome.services.throttling.Callback.run(Callback.java:56) 07:16:03 at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) 07:16:03 at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:140) 07:16:03 at ome.services.blitz.impl.ThumbnailStoreI.getThumbnailByLongestSideSet_async(ThumbnailStoreI.java:83) 07:16:03 at jdk.internal.reflect.GeneratedMethodAccessor3883.invoke(Unknown Source) 07:16:03 at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 07:16:03 at java.base/java.lang.reflect.Method.invoke(Method.java:566) 07:16:03 at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:333) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157) 07:16:03 at omero.cmd.CallContext.invoke(CallContext.java:85) 07:16:03 at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179) 07:16:03 at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:213) 07:16:03 at com.sun.proxy.$Proxy114.getThumbnailByLongestSideSet_async(Unknown Source) 07:16:03 at omero.api._ThumbnailStoreTie.getThumbnailByLongestSideSet_async(_ThumbnailStoreTie.java:132) 07:16:03 at omero.api._ThumbnailStoreDisp.___getThumbnailByLongestSideSet(_ThumbnailStoreDisp.java:743) 07:16:03 at omero.api._ThumbnailStoreDisp.__dispatch(_ThumbnailStoreDisp.java:1088) 07:16:03 at IceInternal.Incoming.invoke(Incoming.java:221) 07:16:03 at Ice.ConnectionI.invokeAll(ConnectionI.java:2536) 07:16:03 at Ice.ConnectionI.dispatch(ConnectionI.java:1145) 07:16:03 at Ice.ConnectionI.message(ConnectionI.java:1056) 07:16:03 at IceInternal.ThreadPool.run(ThreadPool.java:395) 07:16:03 at IceInternal.ThreadPool.access$300(ThreadPool.java:12) 07:16:03 at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:832) 07:16:03 at java.base/java.lang.Thread.run(Thread.java:829) 07:16:03 serverExceptionClass = ome.conditions.ResourceError 07:16:03 message = Error retrieving Pixels id:2901. Pixels set does not exist or the user id:0 has insufficient permissions to retrieve it. 07:16:03 } 07:16:03 FAILED test/integration/test_tickets2000.py::TestTickets2000::test1184 - AssertionError: Expected the test to complete in < 3 seconds, took: 11.561142 07:16:03 assert 11.561142206192017 < 3.0 07:16:03 ==== 33 failed, 3 passed, 2025 deselected, 12 warnings in 236.22s (0:03:56) ==== 07:16:03 !! 10/24/24 08:16:03.777 error: 4 communicators not destroyed during global destruction. 07:16:03 Result: 1 07:16:03 07:16:03 BUILD SUCCESSFUL 07:16:03 Total time: 4 minutes 2 seconds 07:16:03 + /home/omero/workspace/OMERO-test-integration/src/build.py -f components/tools/OmeroJava/build.xml -Dtestng.useDefaultListeners=true -Dtestreports.dir=target/reports/broken broken 07:16:03 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 07:16:03 Buildfile: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/build.xml 07:16:04 Entering /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava... 07:16:04 07:16:04 testng-init: 07:16:04 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ :: 07:16:04 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 07:16:37 07:16:37,446 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 07:16:37 07:16:37,449 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - No custom configurators were discovered as a service. 07:16:37 07:16:37,449 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator 07:16:37 07:16:37,453 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator 07:16:37 07:16:37,453 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] 07:16:37 07:16:37,454 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] 07:16:37 07:16:37,455 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY 07:16:37 07:16:37,455 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator 07:16:37 07:16:37,457 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator 07:16:37 07:16:37,457 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] 07:16:37 07:16:37,458 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 07:16:37 07:16:37,459 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@6d5f4900 - Resource [logback.xml] occurs multiple times on the classpath. 07:16:37 07:16:37,459 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@6d5f4900 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 07:16:37 07:16:37,459 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@6d5f4900 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml] 07:16:37 07:16:37,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr] 07:16:37 07:16:37,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] 07:16:37 07:16:37,820 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property 07:16:37 07:16:37,822 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@1e40fbb3 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender. 07:16:37 07:16:37,822 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@1e40fbb3 - Please move "immediateFlush" property into the enclosing appender. 07:16:37 07:16:37,886 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@1e40fbb3 - Setting the "immediateFlush" property of the enclosing appender to true 07:16:37 07:16:37,887 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR 07:16:37 07:16:37,887 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR 07:16:37 07:16:37,887 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR 07:16:37 07:16:37,887 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR 07:16:37 07:16:37,887 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN 07:16:37 07:16:37,888 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT] 07:16:37 07:16:37,889 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1b560eb0 - End of configuration. 07:16:37 07:16:37,891 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@9e02f84 - Registering current configuration as safe fallback point 07:16:37 07:16:37,891 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2416c658 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 434 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY 07:16:37 07:16:37 lifecycle.test-compile: 07:16:37 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/_omero_build_771177678.tmp 07:16:38 Deleting: /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml 07:16:38 :: loading settings :: file = /home/omero/workspace/OMERO-test-integration/src/etc/ivysettings.xml 07:16:38 :: delivering :: omero#OmeroJava-test;working@bdaf9f08f5d1 :: 5.6.3-513-75ed6e6d79-ice36-ice36 :: integration :: Thu Oct 24 07:16:04 UTC 2024 07:16:38 delivering ivy file to /home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/OmeroJava-test.xml 07:16:38 :: publishing :: omero#OmeroJava-test 07:16:38 published OmeroJava-test to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-75ed6e6d79-ice36-ice36.jar 07:16:38 published ivy to /home/omero/workspace/OMERO-test-integration/src/target/test-repository/OmeroJava-test-5.6.3-513-75ed6e6d79-ice36-ice36.xml 07:16:38 07:16:38 broken: 07:16:38 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0 07:16:39 07:16:38,781 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 07:16:39 07:16:38,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - No custom configurators were discovered as a service. 07:16:39 07:16:38,785 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator 07:16:39 07:16:38,786 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator 07:16:39 07:16:38,787 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] 07:16:39 07:16:38,788 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] 07:16:39 07:16:38,789 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 3 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY 07:16:39 07:16:38,789 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator 07:16:39 07:16:38,789 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator 07:16:39 07:16:38,790 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] 07:16:39 07:16:38,791 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 07:16:39 07:16:38,792 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs multiple times on the classpath. 07:16:39 07:16:38,792 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/classes/logback.xml] 07:16:39 07:16:38,792 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@10e31a9a - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-test-integration/src/components/tools/OmeroJava/target/generated/resources/logback.xml] 07:16:39 07:16:39,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr] 07:16:39 07:16:39,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] 07:16:39 07:16:39,725 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property 07:16:39 07:16:39,726 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender. 07:16:39 07:16:39,726 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Please move "immediateFlush" property into the enclosing appender. 07:16:39 07:16:39,756 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@131774fe - Setting the "immediateFlush" property of the enclosing appender to true 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT] 07:16:39 07:16:39,757 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@158d2680 - End of configuration. 07:16:39 07:16:39,758 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@77847718 - Registering current configuration as safe fallback point 07:16:39 07:16:39,758 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3febb011 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 969 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY 07:16:45 Oct 24, 2024 7:16:45 AM ome.system.OmeroContext prepareRefresh 07:16:45 INFO: Refreshing ome.system.OmeroContext@9fec931: startup date [Thu Oct 24 07:16:45 UTC 2024]; root of context hierarchy 07:16:45 Oct 24, 2024 7:16:45 AM org.springframework.beans.factory.xml.XmlBeanDefinitionReader loadBeanDefinitions 07:16:45 INFO: Loading XML bean definitions from class path resource [ome/config.xml] 07:18:41 =============================================== 07:18:41 OmeroJava.integration 07:18:41 Total tests run: 43, Passes: 2, Failures: 41, Skips: 0 07:18:41 =============================================== 07:18:42 The tests failed. 07:18:42 07:18:42 BUILD SUCCESSFUL 07:18:42 Total time: 2 minutes 38 seconds 07:18:42 + deactivate 07:18:42 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']' 07:18:42 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 07:18:42 + export PATH 07:18:42 + unset _OLD_VIRTUAL_PATH 07:18:42 + '[' -n '' ']' 07:18:42 + '[' -n /bin/bash -o -n '' ']' 07:18:42 + hash -r 07:18:42 + '[' -n '' ']' 07:18:42 + unset VIRTUAL_ENV 07:18:42 + '[' '!' '' = nondestructive ']' 07:18:42 + unset -f deactivate 07:18:42 Recording test results 07:18:43 [Checks API] No suitable checks publisher found. 07:18:43 Build step 'Publish JUnit test result report' changed build result to UNSTABLE 07:18:43 TestNG Reports Processing: START 07:18:43 Looking for TestNG results report in workspace using pattern: **/OmeroJava/target/reports/integration/*.xml 07:18:44 Saving reports... 07:18:45 Processing '/var/jenkins_home/jobs/OMERO-test-integration/builds/206/testng/testng-results-1.xml' 07:18:45 Processing '/var/jenkins_home/jobs/OMERO-test-integration/builds/206/testng/testng-results.xml' 07:18:45 0.038625% of tests failed, which exceeded threshold of 0%. Marking build as UNSTABLE 07:18:45 TestNG Reports Processing: FINISH 07:18:45 Finished: UNSTABLE