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test_remove_pyramids_little_endian(self, tmpdir, capsys):\u000a \"\"\"Test removepyramids with little endian true\"\"\"\u000a img_id = self.import_pyramid(tmpdir)\u000a \u000a # Find the Pixels ID corresponding to the imported image\u000a query_service = self.client.sf.getQueryService()\u000a rows = unwrap(query_service.projection(\u000a \"select p.id from Image i join i.pixels p where i.id = :id\",\u000a ParametersI().addId(img_id)\u000a ))\u000a pixels_id = rows[0][0]\u000a \u000a # Wait until the pyramid actuall exists on disk\u000a> self.wait_for_pyramid_file(pixels_id)\u000a\u000atest/integration/clitest/test_pyramids.py:173: \u000a_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ \u000a\u000aself = \u000apixels_id = 311, timeout = 120\u000a\u000a def wait_for_pyramid_file(self, pixels_id, timeout=120):\u000a pixels_dir = (\u000a \"/home/omero/workspace/\"\u000a \"OMERO-test-integration/data/Pixels\"\u000a )\u000a expected = f\"{pixels_id}_pyramid\"\u000a \u000a deadline = time.time() + timeout\u000a while time.time() < deadline:\u000a for root, _, files in os.walk(pixels_dir):\u000a if expected in files:\u000a return\u000a time.sleep(1)\u000a \u000a> pytest.fail(\u000a f\"Timed out waiting for pyramid file {expected}\"\u000a )\u000aE Failed: Timed out waiting for pyramid file 311_pyramid\u000a\u000atest/integration/clitest/test_pyramids.py:156: Failed", "failedSince" : 29, "flakyFailures" : [ ], "name" : "test_remove_pyramids_little_endian", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 67.644, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_remove_pyramids_imported_after_future", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 68.305, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_remove_pyramids_limit", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 68.254, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_remove_pyramids_not_valid_limit", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 30, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 0.0, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_remove_pyramids_manual", "properties" : { }, "rerunFailures" : [ ], "skipped" : True, "skippedMessage" : "Run locally only", "status" : "SKIPPED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 68.871, "errorDetails" : "UnboundLocalError: cannot access local variable 'pix_id' where it is not associated with a value", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/test_remove__pre_fs_pyramids0')\u000acapsys = <_pytest.capture.CaptureFixture object at 0x7fe957a43e10>\u000a\u000a def test_remove__pre_fs_pyramids(self, tmpdir, capsys):\u000a \"\"\"Test removepyramids for pre-fs data\"\"\"\u000a> self.import_pyramid_pre_fs(tmpdir)\u000a\u000atest/integration/clitest/test_pyramids.py:232: \u000a_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ \u000a\u000aself = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/test_remove__pre_fs_pyramids0')\u000a\u000a def import_pyramid_pre_fs(self, tmpdir):\u000a name = \"test&sizeX=4000&sizeY=4000.fake\"\u000a fakefile = tmpdir.join(name)\u000a fakefile.write('')\u000a pixels = self.import_image(filename=str(fakefile), skip=\"checksum\")[0]\u000a id = int(float(pixels))\u000a # wait for the pyramid to be generated\u000a self.wait_for_pyramid(id)\u000a query_service = self.client.sf.getQueryService()\u000a pixels_service = self.client.sf.getPixelsService()\u000a orig_pix = query_service.findByQuery(\u000a \"select p from Pixels p where p.id = :id\",\u000a ParametersI().addId(id))\u000a orig_fs = query_service.findByQuery(\u000a \"select f from Image i join i.fileset f where i.id = :id\",\u000a ParametersI().addId(orig_pix.image.id.val))\u000a \u000a try:\u000a new_img = pixels_service.copyAndResizeImage(\u000a orig_pix.image.id.val, rint(4000), rint(4000), rint(1),\u000a rint(1), [0], None, True).val\u000a pix_id = unwrap(query_service.projection(\u000a \"select p.id from Image i join i.pixels p where i.id = :id\",\u000a ParametersI().addId(new_img)))[0][0]\u000a # This won't work but it but we then have a pyramid without fileset\u000a self.copyPixels(orig_pix, PixelsI(pix_id, False))\u000a except omero.InternalException:\u000a print(\"Cannot copy pixels for image %s\" % orig_pix.image.id.val)\u000a finally:\u000a self.delete([orig_fs])\u000a> return pix_id\u000a ^^^^^^\u000aE UnboundLocalError: cannot access local variable 'pix_id' where it is not associated with a value\u000a\u000atest/integration/clitest/test_pyramids.py:127: UnboundLocalError", "failedSince" : 29, "flakyFailures" : [ ], "name" : "test_remove__pre_fs_pyramids", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 188.629, "errorDetails" : "Failed: Timed out waiting for pyramid file 316_pyramid", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/test_remove_pyramids_big_endia0')\u000acapsys = <_pytest.capture.CaptureFixture object at 0x7fe957b9d550>\u000a\u000a def test_remove_pyramids_big_endian(self, tmpdir, capsys):\u000a \"\"\"Test removepyramids with big endian true\"\"\"\u000a \u000a name = \"big&sizeX=3500&sizeY=3500&little=false.fake\"\u000a img_id = self.import_pyramid(tmpdir, name=name, skip=None)\u000a \u000a query_service = self.client.sf.getQueryService()\u000a image = query_service.findByQuery(\u000a \"select i from Image i join fetch i.pixels p where i.id = :id\",\u000a ParametersI().addId(img_id)\u000a )\u000a \u000a pixels_id = next(iter(image.copyPixels())).id.val\u000a # Wait for pyramid to actually be on disk\u000a> self.wait_for_pyramid_file(pixels_id)\u000a\u000atest/integration/clitest/test_pyramids.py:254: \u000a_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ \u000a\u000aself = \u000apixels_id = 316, timeout = 120\u000a\u000a def wait_for_pyramid_file(self, pixels_id, timeout=120):\u000a pixels_dir = (\u000a \"/home/omero/workspace/\"\u000a \"OMERO-test-integration/data/Pixels\"\u000a )\u000a expected = f\"{pixels_id}_pyramid\"\u000a \u000a deadline = time.time() + timeout\u000a while time.time() < deadline:\u000a for root, _, files in os.walk(pixels_dir):\u000a if expected in files:\u000a return\u000a time.sleep(1)\u000a \u000a> pytest.fail(\u000a f\"Timed out waiting for pyramid file {expected}\"\u000a )\u000aE Failed: Timed out waiting for pyramid file 316_pyramid\u000a\u000atest/integration/clitest/test_pyramids.py:156: Failed", "failedSince" : 29, "flakyFailures" : [ ], "name" : "test_remove_pyramids_big_endian", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 188.357, "errorDetails" : "Failed: Timed out waiting for pyramid file 317_pyramid", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/test_remove_pyramids0')\u000acapsys = <_pytest.capture.CaptureFixture object at 0x7fe957b3a350>\u000a\u000a def test_remove_pyramids(self, tmpdir, capsys):\u000a \"\"\"Test removepyramids with litlle endian true\"\"\"\u000a name = \"big&sizeX=3500&sizeY=3500&little=false.fake\"\u000a big_id = self.import_pyramid(tmpdir, name=name, skip=None)\u000a query_service = self.client.sf.getQueryService()\u000a \u000a rows = unwrap(query_service.projection(\u000a \"select p.id from Image i join i.pixels p where i.id = :id\",\u000a ParametersI().addId(big_id)\u000a ))\u000a pixels_id = rows[0][0]\u000a \u000a> self.wait_for_pyramid_file(pixels_id)\u000a\u000atest/integration/clitest/test_pyramids.py:275: \u000a_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ \u000a\u000aself = \u000apixels_id = 317, timeout = 120\u000a\u000a def wait_for_pyramid_file(self, pixels_id, timeout=120):\u000a pixels_dir = (\u000a \"/home/omero/workspace/\"\u000a \"OMERO-test-integration/data/Pixels\"\u000a )\u000a expected = f\"{pixels_id}_pyramid\"\u000a \u000a deadline = time.time() + timeout\u000a while time.time() < deadline:\u000a for root, _, files in os.walk(pixels_dir):\u000a if expected in files:\u000a return\u000a time.sleep(1)\u000a \u000a> pytest.fail(\u000a f\"Timed out waiting for pyramid file {expected}\"\u000a )\u000aE Failed: Timed out waiting for pyramid file 317_pyramid\u000a\u000atest/integration/clitest/test_pyramids.py:156: Failed", "failedSince" : 29, "flakyFailures" : [ ], "name" : "test_remove_pyramids", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.clitest.test_pyramids.TestRemovePyramidsFullAdmin", "duration" : 69.115, "errorDetails" : "AssertionError: assert '5eb87159f8ecb29ae94909082c3288d338985bb2' != '5eb87159f8ecb29ae94909082c3288d338985bb2'", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/test_remove_pyramids_check_thu0')\u000acapsys = <_pytest.capture.CaptureFixture object at 0x7fe9577cff50>\u000a\u000a def test_remove_pyramids_check_thumbnails(self, tmpdir, capsys):\u000a \"\"\"Test check that the thumbnail is correctly created\"\"\"\u000a name = \"big&sizeX=3500&sizeY=3500&little=false.fake\"\u000a img_id = self.import_pyramid(tmpdir, name=name, skip=None)\u000a query_service = self.client.sf.getQueryService()\u000a pix = query_service.findByQuery(\u000a \"select p from Pixels p where p.image.id = :id\",\u000a ParametersI().addId(img_id))\u000a tb = self.client.sf.createThumbnailStore()\u000a id = pix.id.val\u000a thumb_hash = None\u000a try:\u000a thumbs = tb.getThumbnailByLongestSideSet(rint(64), [id],\u000a {'omero.group': '-1'})\u000a assert len(thumbs) == 1\u000a thumb_hash = self.calculate_sha1(thumbs[id])\u000a # remove the pyramid and the thumbnail\u000a self.args += [\"--endian=big\"]\u000a self.cli.invoke(self.args, strict=True)\u000a out, err = capsys.readouterr()\u000a thumbs = tb.getThumbnailByLongestSideSet(rint(64), [id],\u000a {'omero.group': '-1'})\u000a assert len(thumbs) == 1\u000a # The clock should be returned during the pyramid generation\u000a digest = self.calculate_sha1(thumbs[id])\u000a> assert digest != thumb_hash\u000aE AssertionError: assert '5eb87159f8ecb29ae94909082c3288d338985bb2' != '5eb87159f8ecb29ae94909082c3288d338985bb2'\u000a\u000atest/integration/clitest/test_pyramids.py:319: AssertionError", "failedSince" : 29, "flakyFailures" : [ ], "name" : "test_remove_pyramids_check_thumbnails", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_script.TestScript", "duration" : 0.473, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testList", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_script.TestScript", "duration" : 13.505, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testDemo", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_script.TestScript", "duration" : 10.154, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testFullSession", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_script.TestScript", "duration" : 20.241, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testReplace", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_script.TestScript", "duration" : 1.908, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testReplaceOfficial", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 8.345, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_basic", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 5.88, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_wildcard", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 6.002, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_name_field", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 5.989, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_description_field", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 8.997, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_style", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 5.99, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_ids_only", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 6.004, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : 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"testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 5.997, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_other_dates[data1]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 7.025, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_search_other_dates[data2]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.clitest.test_search.TestSearch", "duration" : 5.978, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 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[ ], "age" : 0, "className" : "OmeroPy.test.integration.test_rawpixelsstore.TestRPS", "duration" : 1.859, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testTicket4737WithForEachTile", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_rawpixelsstore.TestRPS", "duration" : 154.268, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testBigPlane", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.test_rawpixelsstore.TestRPS", "duration" : 122.757, "errorDetails" : "assert False", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/testRomioToPyramid0')\u000a\u000a def testRomioToPyramid(self, tmpdir):\u000a \"\"\"\u000a Here we create a pixels that is not big,\u000a then modify its metadata so that it IS big,\u000a in order to trick the service into throwing\u000a us a MissingPyramidException\u000a \"\"\"\u000a from omero.util import concurrency\u000a pix = self.missing_pyramid()\u000a rps = self.sf.createRawPixelsStore()\u000a try:\u000a # First execution should certainly fail\u000a try:\u000a rps.setPixelsId(int(pix), True)\u000a assert False, \"Should throw!\"\u000a except omero.MissingPyramidException as mpm:\u000a assert int(pix) == mpm.pixelsID\u000a \u000a # Eventually, however, it should be generated\u000a i = 10\u000a success = False\u000a while i > 0 and not success:\u000a try:\u000a rps.setPixelsId(int(pix), True)\u000a success = True\u000a except omero.MissingPyramidException as mpm:\u000a assert int(pix) == mpm.pixelsID\u000a backOff = mpm.backOff / 1000\u000a event = concurrency.get_event(\"testRomio\")\u000a event.wait(backOff) # seconds\u000a i -= 1\u000a> assert success\u000aE assert False\u000a\u000atest/integration/test_rawpixelsstore.py:116: AssertionError", "failedSince" : 29, "flakyFailures" : [ ], "name" : "testRomioToPyramid", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.test_rawpixelsstore.TestRPS", "duration" : 122.596, "errorDetails" : "assert False", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/test2RomioToPyramidWithNegOne0')\u000a\u000a def test2RomioToPyramidWithNegOne(self, tmpdir):\u000a \"\"\"\u000a Here we try the above but pass omero.group:-1\u000a to see if we can cause an exception.\u000a \"\"\"\u000a all_context = {\"omero.group\": \"-1\"}\u000a \u000a from omero.util import concurrency\u000a pix = self.missing_pyramid()\u000a rps = self.sf.createRawPixelsStore(all_context)\u000a try:\u000a # First execution should certainly fail\u000a try:\u000a rps.setPixelsId(int(pix), True, all_context)\u000a assert False, \"Should throw!\"\u000a except omero.MissingPyramidException as mpm:\u000a assert int(pix) == mpm.pixelsID\u000a \u000a # Eventually, however, it should be generated\u000a i = 10\u000a success = False\u000a while i > 0 and not success:\u000a try:\u000a rps.setPixelsId(int(pix), True, all_context)\u000a success = True\u000a except omero.MissingPyramidException as mpm:\u000a assert int(pix) == mpm.pixelsID\u000a backOff = mpm.backOff / 1000\u000a event = concurrency.get_event(\"testRomio\")\u000a event.wait(backOff) # seconds\u000a i -= 1\u000a> assert success\u000aE assert False\u000a\u000atest/integration/test_rawpixelsstore.py:151: AssertionError", "failedSince" : 29, "flakyFailures" : [ ], "name" : "test2RomioToPyramidWithNegOne", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 1, "className" : "OmeroPy.test.integration.test_rawpixelsstore.TestRPS", "duration" : 122.876, "errorDetails" : "assert False", "errorStackTrace" : "self = \u000atmpdir = local('/tmp/pytest-of-omero/pytest-0/testPyramidConcurrentAccess0')\u000a\u000a def testPyramidConcurrentAccess(self, tmpdir):\u000a \"\"\"\u000a See ticket:11709\u000a \"\"\"\u000a all_context = {\"omero.group\": \"-1\"}\u000a \u000a from omero.util import concurrency\u000a pix = self.missing_pyramid()\u000a rps = self.sf.createRawPixelsStore(all_context)\u000a try:\u000a # First execution should certainly fail\u000a try:\u000a rps.setPixelsId(int(pix), True, all_context)\u000a assert False, \"Should throw!\"\u000a except omero.MissingPyramidException as mpm:\u000a assert int(pix) == mpm.pixelsID\u000a \u000a # Eventually, however, it should be generated\u000a i = 10\u000a success = False\u000a while i > 0 and not success:\u000a try:\u000a rps.setPixelsId(int(pix), True, all_context)\u000a success = True\u000a except omero.MissingPyramidException as mpm:\u000a assert int(pix) == mpm.pixelsID\u000a backOff = mpm.backOff / 1000\u000a event = concurrency.get_event(\"testRomio\")\u000a event.wait(backOff) # seconds\u000a i -= 1\u000a> assert success\u000aE assert False\u000a\u000atest/integration/test_rawpixelsstore.py:185: AssertionError", "failedSince" : 29, "flakyFailures" : [ ], "name" : "testPyramidConcurrentAccess", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_rawpixelsstore.TestTiles", "duration" : 101.746, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testTiles", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reimport.TestReimportArchivedFiles", "duration" : 18.31, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testConvertSynthetic", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_render.TestRendering", "duration" : 1.588, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test_render_region", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 1.394, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testCreate", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.092, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testWrite", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.119, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testFailedWrite", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.086, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testWriteRead", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.091, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testAppend", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.086, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testTruncateToZero", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.123, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testClose", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_reporawfilestore.TestRepoRawFileStore", "duration" : 0.05, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testImportLogFilenameSetting", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestRepository", "duration" : 1.241, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testBasicUsage", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestRepository", "duration" : 0.117, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testSanityCheckRepos", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestRepository", "duration" : 0.277, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testManagedRepoAsPubliRepo", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestFileExists", "duration" : 1.165, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testFileExistsForDirectory", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestFileExists", "duration" : 0.153, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testFileExistsForFile", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestManagedRepositoryMultiUser", "duration" : 3.624, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testTopPrivateGroup", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestManagedRepositoryMultiUser", "duration" : 2.56, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testDirPrivateGroup", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestManagedRepositoryMultiUser", "duration" : 2.6, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testDirReadOnlyGroup", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestManagedRepositoryMultiUser", "duration" : 2.823, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testDirReadWriteGroup", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestManagedRepositoryMultiUser", "duration" : 2.969, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" 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"testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestPythonImporter", "duration" : 2.822, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testImportPaths", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestPythonImporter", "duration" : 2.83, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testReopenRawFileStoresPR2542", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestPythonImporter", "duration" : 4.073, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, 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"age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestUserTemplate", "duration" : 0.323, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testUserDirShouldBeGloballyWriteable", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestFilesetQueries", "duration" : 1.078, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testDeleteQuery", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestFilesetQueries", "duration" : 0.044, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testCountFilesetFiles", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestFilesetQueries", "duration" : 0.049, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testImportedImageFiles", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_repository.TestOriginalMetadata", "duration" : 3.884, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testFakeImport", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ 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"properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms", "duration" : 2.405, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test12145ShareSettingsSetRnd[readOnly-admin]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms", "duration" : 2.686, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test12145ShareSettingsSetRnd[readAnnotate-owner]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms", "duration" : 2.78, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test12145ShareSettingsSetRnd[readAnnotate-admin]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms", "duration" : 2.424, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test12145ShareSettingsSetRnd[readWrite-owner]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms", "duration" : 2.714, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "test12145ShareSettingsSetRnd[readWrite-admin]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbnailPerms.TestThumbnailPerms", "duration" : 1.738, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testGetThumbnailSetAfterApplySettings", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 8.394, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testCreateThumbnails", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 5.617, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testCreateThumbnails64x64", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 16.95, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testCreateThumbnailsByLongestSideSet64x64", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 5.026, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testThumbnailExists", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 29, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 26.142, "errorDetails" : "AssertionError: assert False\u000a + where False = setPixelsId(917)\u000a + where setPixelsId = 50b3c488-0d6b-4a57-9d1d-317497751c3e/fd6d318a-2bc2-4a72-a5ce-f6e910630f6aomero.api.ThumbnailStore -t -e 1.1:tcp -h 172.18.0.9 -p 41371 -t 60000.setPixelsId\u000a + and 917 = int('917')", "errorStackTrace" : "self = \u000ameth = 'one'\u000a\u000a @pytest.mark.parametrize(\"meth\", (\"one\", \"set\",))\u000a def testThumbnailVersion(self, meth):\u000a \u000a assert meth in (\"one\", \"set\")\u000a i64 = rint(64)\u000a \u000a pix = self.missing_pyramid()\u000a q = (\"select tb from Thumbnail tb \"\u000a \"where tb.pixels.id = %s \"\u000a \"order by tb.id desc \")\u000a q = q % pix\u000a p = ParametersI().page(0, 1)\u000a \u000a def get():\u000a return self.query.findByQuery(q, p)\u000a \u000a # Before anything has been called, there\u000a # should be no thumbnail\u000a assert not get()\u000a \u000a # At this stage, there should still be no\u000a # thumbnail\u000a tb = self.client.sf.createThumbnailStore()\u000a if meth == \"one\":\u000a tb.setPixelsId(int(pix))\u000a tb.resetDefaults()\u000a assert not tb.thumbnailExists(i64, i64)\u000a assert tb.isInProgress()\u000a \u000a # As soon as it's requested, it should have a -1\u000a # version to mark pyramid creation as ongoing.\u000a if meth == \"one\":\u000a before = tb.getThumbnail(i64, i64)\u000a assert not tb.thumbnailExists(i64, i64)\u000a assert tb.isInProgress()\u000a elif meth == \"set\":\u000a before = tb.getThumbnailSet(i64, i64, [int(pix)])\u000a before = before[int(pix)]\u000a assert get().version.val == -1\u000a \u000a # Now we wait until the pyramid has been created\u000a # and test that a proper version has been set.\u000a event = get_event(\"test_thumbs\")\u000a secs = 20\u000a rps = self.client.sf.createRawPixelsStore()\u000a for x in range(secs):\u000a try:\u000a rps.setPixelsId(int(pix), True)\u000a event = None\u000a break\u000a except MissingPyramidException:\u000a event.wait(1)\u000a if event:\u000a assert \"Pyramid was not generated %ss\" % secs\u000a \u000a if meth == \"one\":\u000a # Re-load the thumbnail store now that\u000a # the pyramid is generated.\u000a tb.close()\u000a tb = self.client.sf.createThumbnailStore()\u000a if not tb.setPixelsId(int(pix)):\u000a tb.resetDefaults()\u000a tb.close()\u000a tb = self.client.sf.createThumbnailStore()\u000a> assert tb.setPixelsId(int(pix))\u000aE AssertionError: assert False\u000aE + where False = setPixelsId(917)\u000aE + where setPixelsId = 50b3c488-0d6b-4a57-9d1d-317497751c3e/fd6d318a-2bc2-4a72-a5ce-f6e910630f6aomero.api.ThumbnailStore -t -e 1.1:tcp -h 172.18.0.9 -p 41371 -t 60000.setPixelsId\u000aE + and 917 = int('917')\u000a\u000atest/integration/test_thumbs.py:153: AssertionError", "failedSince" : 1, "flakyFailures" : [ ], "name" : "testThumbnailVersion[one]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 29, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 26.684, "errorDetails" : "assert -1 >= 0\u000a + where -1 = object #0 (::omero::RInt)\\n{\\n _val = -1\\n}.val\u000a + where object #0 (::omero::RInt)\\n{\\n _val = -1\\n} = object #0 (::omero::model::Thumbnail)\\n{\\n _id = object #1 (::omero::RLong)\\n {\\n _val = 350\\n }\\n _details = object #2 (::omero::model::Details)\\n {\\n _owner = object #3 (::omero::model::Experimenter)\\n {\\n _id = object #4 (::omero::RLong)\\n {\\n _val = 1141\\n }\\n _details = \\n _loaded = False\\n _version = \\n _groupExperimenterMapSeq = \\n {\\n }\\n _groupExperimenterMapLoaded = False\\n _omeName = \\n _firstName = \\n _middleName = \\n _lastName = \\n _institution = \\n _ldap = \\n _email = \\n _config = \\n {\\n }\\n _annotationLinksSeq = \\n {\\n }\\n _annotationLinksLoaded = False\\n _annotationLinksCountPerOwner = \\n {\\n }\\n }\\n _group = object #5 (::omero::model::ExperimenterGroup)\\n {\\n _id = object #6 (::omero::RLong)\\n {\\n _val = 1060\\n }\\n _details = object #7 (::omer...>\\n _image = \\n _relatedTo = \\n _pixelsType = \\n _significantBits = \\n _sizeX = \\n _sizeY = \\n _sizeZ = \\n _sizeC = \\n _sizeT = \\n _sha1 = \\n _dimensionOrder = \\n _physicalSizeX = \\n _physicalSizeY = \\n _physicalSizeZ = \\n _waveStart = \\n _waveIncrement = \\n _timeIncrement = \\n _methodology = \\n _planeInfoSeq = \\n {\\n }\\n _planeInfoLoaded = False\\n _pixelsFileMapsSeq = \\n {\\n }\\n _pixelsFileMapsLoaded = False\\n _pixelsFileMapsCountPerOwner = \\n {\\n }\\n _channelsSeq = \\n {\\n }\\n _channelsLoaded = False\\n _settingsSeq = \\n {\\n }\\n _settingsLoaded = False\\n _thumbnailsSeq = \\n {\\n }\\n _thumbnailsLoaded = False\\n }\\n _mimeType = object #24 (::omero::RString)\\n {\\n _val = image/jpeg\\n }\\n _sizeX = object #25 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _sizeY = object #26 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _ref = \\n}.version\u000a + where object #0 (::omero::model::Thumbnail)\\n{\\n _id = object #1 (::omero::RLong)\\n {\\n _val = 350\\n }\\n _details = object #2 (::omero::model::Details)\\n {\\n _owner = object #3 (::omero::model::Experimenter)\\n {\\n _id = object #4 (::omero::RLong)\\n {\\n _val = 1141\\n }\\n _details = \\n _loaded = False\\n _version = \\n _groupExperimenterMapSeq = \\n {\\n }\\n _groupExperimenterMapLoaded = False\\n _omeName = \\n _firstName = \\n _middleName = \\n _lastName = \\n _institution = \\n _ldap = \\n _email = \\n _config = \\n {\\n }\\n _annotationLinksSeq = \\n {\\n }\\n _annotationLinksLoaded = False\\n _annotationLinksCountPerOwner = \\n {\\n }\\n }\\n _group = object #5 (::omero::model::ExperimenterGroup)\\n {\\n _id = object #6 (::omero::RLong)\\n {\\n _val = 1060\\n }\\n _details = object #7 (::omer...>\\n _image = \\n _relatedTo = \\n _pixelsType = \\n _significantBits = \\n _sizeX = \\n _sizeY = \\n _sizeZ = \\n _sizeC = \\n _sizeT = \\n _sha1 = \\n _dimensionOrder = \\n _physicalSizeX = \\n _physicalSizeY = \\n _physicalSizeZ = \\n _waveStart = \\n _waveIncrement = \\n _timeIncrement = \\n _methodology = \\n _planeInfoSeq = \\n {\\n }\\n _planeInfoLoaded = False\\n _pixelsFileMapsSeq = \\n {\\n }\\n _pixelsFileMapsLoaded = False\\n _pixelsFileMapsCountPerOwner = \\n {\\n }\\n _channelsSeq = \\n {\\n }\\n _channelsLoaded = False\\n _settingsSeq = \\n {\\n }\\n _settingsLoaded = False\\n _thumbnailsSeq = \\n {\\n }\\n _thumbnailsLoaded = False\\n }\\n _mimeType = object #24 (::omero::RString)\\n {\\n _val = image/jpeg\\n }\\n _sizeX = object #25 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _sizeY = object #26 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _ref = \\n} = .get at 0x7fe976e81800>()", "errorStackTrace" : "self = \u000ameth = 'set'\u000a\u000a @pytest.mark.parametrize(\"meth\", (\"one\", \"set\",))\u000a def testThumbnailVersion(self, meth):\u000a \u000a assert meth in (\"one\", \"set\")\u000a i64 = rint(64)\u000a \u000a pix = self.missing_pyramid()\u000a q = (\"select tb from Thumbnail tb \"\u000a \"where tb.pixels.id = %s \"\u000a \"order by tb.id desc \")\u000a q = q % pix\u000a p = ParametersI().page(0, 1)\u000a \u000a def get():\u000a return self.query.findByQuery(q, p)\u000a \u000a # Before anything has been called, there\u000a # should be no thumbnail\u000a assert not get()\u000a \u000a # At this stage, there should still be no\u000a # thumbnail\u000a tb = self.client.sf.createThumbnailStore()\u000a if meth == \"one\":\u000a tb.setPixelsId(int(pix))\u000a tb.resetDefaults()\u000a assert not tb.thumbnailExists(i64, i64)\u000a assert tb.isInProgress()\u000a \u000a # As soon as it's requested, it should have a -1\u000a # version to mark pyramid creation as ongoing.\u000a if meth == \"one\":\u000a before = tb.getThumbnail(i64, i64)\u000a assert not tb.thumbnailExists(i64, i64)\u000a assert tb.isInProgress()\u000a elif meth == \"set\":\u000a before = tb.getThumbnailSet(i64, i64, [int(pix)])\u000a before = before[int(pix)]\u000a assert get().version.val == -1\u000a \u000a # Now we wait until the pyramid has been created\u000a # and test that a proper version has been set.\u000a event = get_event(\"test_thumbs\")\u000a secs = 20\u000a rps = self.client.sf.createRawPixelsStore()\u000a for x in range(secs):\u000a try:\u000a rps.setPixelsId(int(pix), True)\u000a event = None\u000a break\u000a except MissingPyramidException:\u000a event.wait(1)\u000a if event:\u000a assert \"Pyramid was not generated %ss\" % secs\u000a \u000a if meth == \"one\":\u000a # Re-load the thumbnail store now that\u000a # the pyramid is generated.\u000a tb.close()\u000a tb = self.client.sf.createThumbnailStore()\u000a if not tb.setPixelsId(int(pix)):\u000a tb.resetDefaults()\u000a tb.close()\u000a tb = self.client.sf.createThumbnailStore()\u000a assert tb.setPixelsId(int(pix))\u000a after = tb.getThumbnail(i64, i64)\u000a assert before != after\u000a assert tb.thumbnailExists(i64, i64)\u000a assert not tb.isInProgress()\u000a elif meth == \"set\":\u000a tb.getThumbnailSet(i64, i64, [int(pix)])\u000a> assert get().version.val >= 0\u000aE assert -1 >= 0\u000aE + where -1 = object #0 (::omero::RInt)\\n{\\n _val = -1\\n}.val\u000aE + where object #0 (::omero::RInt)\\n{\\n _val = -1\\n} = object #0 (::omero::model::Thumbnail)\\n{\\n _id = object #1 (::omero::RLong)\\n {\\n _val = 350\\n }\\n _details = object #2 (::omero::model::Details)\\n {\\n _owner = object #3 (::omero::model::Experimenter)\\n {\\n _id = object #4 (::omero::RLong)\\n {\\n _val = 1141\\n }\\n _details = \\n _loaded = False\\n _version = \\n _groupExperimenterMapSeq = \\n {\\n }\\n _groupExperimenterMapLoaded = False\\n _omeName = \\n _firstName = \\n _middleName = \\n _lastName = \\n _institution = \\n _ldap = \\n _email = \\n _config = \\n {\\n }\\n _annotationLinksSeq = \\n {\\n }\\n _annotationLinksLoaded = False\\n _annotationLinksCountPerOwner = \\n {\\n }\\n }\\n _group = object #5 (::omero::model::ExperimenterGroup)\\n {\\n _id = object #6 (::omero::RLong)\\n {\\n _val = 1060\\n }\\n _details = object #7 (::omer...>\\n _image = \\n _relatedTo = \\n _pixelsType = \\n _significantBits = \\n _sizeX = \\n _sizeY = \\n _sizeZ = \\n _sizeC = \\n _sizeT = \\n _sha1 = \\n _dimensionOrder = \\n _physicalSizeX = \\n _physicalSizeY = \\n _physicalSizeZ = \\n _waveStart = \\n _waveIncrement = \\n _timeIncrement = \\n _methodology = \\n _planeInfoSeq = \\n {\\n }\\n _planeInfoLoaded = False\\n _pixelsFileMapsSeq = \\n {\\n }\\n _pixelsFileMapsLoaded = False\\n _pixelsFileMapsCountPerOwner = \\n {\\n }\\n _channelsSeq = \\n {\\n }\\n _channelsLoaded = False\\n _settingsSeq = \\n {\\n }\\n _settingsLoaded = False\\n _thumbnailsSeq = \\n {\\n }\\n _thumbnailsLoaded = False\\n }\\n _mimeType = object #24 (::omero::RString)\\n {\\n _val = image/jpeg\\n }\\n _sizeX = object #25 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _sizeY = object #26 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _ref = \\n}.version\u000aE + where object #0 (::omero::model::Thumbnail)\\n{\\n _id = object #1 (::omero::RLong)\\n {\\n _val = 350\\n }\\n _details = object #2 (::omero::model::Details)\\n {\\n _owner = object #3 (::omero::model::Experimenter)\\n {\\n _id = object #4 (::omero::RLong)\\n {\\n _val = 1141\\n }\\n _details = \\n _loaded = False\\n _version = \\n _groupExperimenterMapSeq = \\n {\\n }\\n _groupExperimenterMapLoaded = False\\n _omeName = \\n _firstName = \\n _middleName = \\n _lastName = \\n _institution = \\n _ldap = \\n _email = \\n _config = \\n {\\n }\\n _annotationLinksSeq = \\n {\\n }\\n _annotationLinksLoaded = False\\n _annotationLinksCountPerOwner = \\n {\\n }\\n }\\n _group = object #5 (::omero::model::ExperimenterGroup)\\n {\\n _id = object #6 (::omero::RLong)\\n {\\n _val = 1060\\n }\\n _details = object #7 (::omer...>\\n _image = \\n _relatedTo = \\n _pixelsType = \\n _significantBits = \\n _sizeX = \\n _sizeY = \\n _sizeZ = \\n _sizeC = \\n _sizeT = \\n _sha1 = \\n _dimensionOrder = \\n _physicalSizeX = \\n _physicalSizeY = \\n _physicalSizeZ = \\n _waveStart = \\n _waveIncrement = \\n _timeIncrement = \\n _methodology = \\n _planeInfoSeq = \\n {\\n }\\n _planeInfoLoaded = False\\n _pixelsFileMapsSeq = \\n {\\n }\\n _pixelsFileMapsLoaded = False\\n _pixelsFileMapsCountPerOwner = \\n {\\n }\\n _channelsSeq = \\n {\\n }\\n _channelsLoaded = False\\n _settingsSeq = \\n {\\n }\\n _settingsLoaded = False\\n _thumbnailsSeq = \\n {\\n }\\n _thumbnailsLoaded = False\\n }\\n _mimeType = object #24 (::omero::RString)\\n {\\n _val = image/jpeg\\n }\\n _sizeX = object #25 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _sizeY = object #26 (::omero::RInt)\\n {\\n _val = 64\\n }\\n _ref = \\n} = .get at 0x7fe976e81800>()\u000a\u000atest/integration/test_thumbs.py:160: AssertionError", "failedSince" : 1, "flakyFailures" : [ ], "name" : "testThumbnailVersion[set]", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "FAILED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", "duration" : 5.231, "errorDetails" : None, "errorStackTrace" : None, "failedSince" : 0, "flakyFailures" : [ ], "name" : "testGetThumbnailx64x64", "properties" : { }, "rerunFailures" : [ ], "skipped" : False, "skippedMessage" : None, "status" : "PASSED", "stderr" : None, "stdout" : None }, { "testActions" : [ ], "age" : 0, "className" : "OmeroPy.test.integration.test_thumbs.TestThumbs", 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