Started by upstream project "Trigger" build number 586
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-zarr-pixel-buffer-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-zarr-pixel-buffer-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision c633258a4f93211e058118422945cc82aab3de47 (refs/remotes/origin/master)
Commit message: "Add include label so it is picked by scc"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-zarr-pixel-buffer-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-zarr-pixel-buffer.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-zarr-pixel-buffer.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-zarr-pixel-buffer.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f c633258a4f93211e058118422945cc82aab3de47 # timeout=10
> git rev-list --no-walk c633258a4f93211e058118422945cc82aab3de47 # timeout=10
Cleaning workspace
[Pipeline] pwd
[Pipeline] sh
+ mkdir -p build
+ echo build
[Pipeline] sh
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
+ pushd build
~/workspace/OMERO-zarr-pixel-buffer-push/build ~/workspace/OMERO-zarr-pixel-buffer-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-zarr-pixel-buffer-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-zarr-pixel-buffer-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-zarr-pixel-buffer-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.7.0-py3-none-any.whl (416 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
Using cached requests-2.32.4-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.8.3-py3-none-any.whl (161 kB)
Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-zarr-pixel-buffer.git
+ BASE_REPO=omero-zarr-pixel-buffer.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-zarr-pixel-buffer-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-zarr-pixel-buffer-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-zarr-pixel-buffer-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-zarr-pixel-buffer-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-14 00:42:37,588 [ scc.config] DEBUG Found github.token
2025-08-14 00:42:37,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:37,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:42:38,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:38,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:42:38,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:38,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-14 00:42:38,670 [ scc.gh] DEBUG 4293 remaining from 5000 (Reset at 01:08
2025-08-14 00:42:38,671 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-14 00:42:38,673 [ scc.git] DEBUG Check current status
2025-08-14 00:42:38,673 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-14 00:42:38,675 [ scc.git] DEBUG c633258 Add include label so it is picked by scc
2025-08-14 00:42:38,675 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-14 00:42:38,719 [ scc.config] DEBUG Found remote.origin.url
2025-08-14 00:42:38,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:39,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer HTTP/1.1" 200 None
2025-08-14 00:42:39,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:39,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-14 00:42:40,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:40,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-14 00:42:40,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:40,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-14 00:42:40,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:41,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-14 00:42:41,224 [ scc.git] DEBUG Resetting...
2025-08-14 00:42:41,224 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-14 00:42:41,229 [ scc.git] DEBUG HEAD is now at c633258 Add include label so it is picked by scc
2025-08-14 00:42:41,229 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-14 00:42:41,270 [ scc.git] DEBUG Check current status
2025-08-14 00:42:41,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-14 00:42:41,272 [ scc.git] DEBUG c633258 Add include label so it is picked by scc
2025-08-14 00:42:41,272 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-14 00:42:41,312 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-14 00:42:41,312 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-14 00:42:41,312 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-14 00:42:41,312 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-14 00:42:41,312 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-14 00:42:41,312 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:42:41,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:41,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/pulls HTTP/1.1" 200 None
2025-08-14 00:42:42,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:42,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/issues/11 HTTP/1.1" 200 None
2025-08-14 00:42:42,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:42,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/issues/10 HTTP/1.1" 200 None
2025-08-14 00:42:43,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:43,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/issues/8 HTTP/1.1" 200 None
2025-08-14 00:42:43,478 [ scc.repo] DEBUG - PR 8 github-actions[bot] 'Merge all feature branches into master'
2025-08-14 00:42:43,479 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:42:43,479 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:42:43,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:43,481 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:42:43,483 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:42:43,484 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:42:43,487 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:42:43,490 [ scc.git] DEBUG Already up to date.
2025-08-14 00:42:43,490 [ scc.git] DEBUG Calling 'git fetch origin pull/8/head'
2025-08-14 00:42:43,774 [ scc.git] DEBUG From https://github.com/ome/omero-zarr-pixel-buffer
2025-08-14 00:42:43,775 [ scc.git] DEBUG * branch refs/pull/8/head -> FETCH_HEAD
2025-08-14 00:42:43,779 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:42:43,779 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:42:43,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:43,781 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5e10ffb816b477ea1a10c02df04a5a72e10c6b68'
2025-08-14 00:42:43,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:43,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 8 (Merge all feature branches into master) 5e10ffb816b477ea1a10c02df04a5a72e10c6b68'
2025-08-14 00:42:43,798 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:42:43,803 [ scc.git] DEBUG .github/workflows/build.yml | 4 +-
2025-08-14 00:42:43,803 [ scc.git] DEBUG omero-zarr-pixel-buffer-0.5.1-SNAPSHOT.jar | Bin 0 -> 28941 bytes
2025-08-14 00:42:43,803 [ scc.git] DEBUG .../omero/zarr/OmeroAmazonS3ClientFactory.java | 34 +-
2025-08-14 00:42:43,803 [ scc.git] DEBUG .../omero/zarr/ZarrPixelBuffer.java | 197 ++++++++--
2025-08-14 00:42:43,803 [ scc.git] DEBUG .../com/glencoesoftware/omero/zarr/TestZarr.java | 420 +++++++++++++++++++++
2025-08-14 00:42:43,803 [ scc.git] DEBUG .../omero/zarr/ZarrPixelBufferTest.java | 327 +++++++++++++++-
2025-08-14 00:42:43,803 [ scc.git] DEBUG 6 files changed, 930 insertions(+), 52 deletions(-)
2025-08-14 00:42:43,803 [ scc.git] DEBUG create mode 100644 omero-zarr-pixel-buffer-0.5.1-SNAPSHOT.jar
2025-08-14 00:42:43,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:43,804 [ scc.git] DEBUG create mode 100644 src/test/java/com/glencoesoftware/omero/zarr/TestZarr.java
2025-08-14 00:42:43,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:42:43,992 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:42:44,032 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:42:44,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:44,034 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:42:44,038 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f10e5e62010> has no local changes
2025-08-14 00:42:44,038 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-zarr-pixel-buffer
Excluded PRs:
- PR 11 dominikl 'Support for Zarr v3 (resp NGFF 0.5)' (stage: draft)
- PR 10 Rdornier 'Install jars' (user: Rdornier)
Already up to date.
Merged PRs:
- PR 8 github-actions[bot] 'Merge all feature branches into master'
Generated by OMERO-zarr-pixel-buffer-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/35/)'
2025-08-14 00:42:44,044 [ scc.git] DEBUG [detached HEAD 964d8d3] merge master -Dorg -Snone
2025-08-14 00:42:44,044 [ scc.merge] INFO Repository: ome/omero-zarr-pixel-buffer
2025-08-14 00:42:44,045 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:42:44,045 [ scc.merge] INFO - PR 11 dominikl 'Support for Zarr v3 (resp NGFF 0.5)' (stage: draft)
2025-08-14 00:42:44,045 [ scc.merge] INFO - PR 10 Rdornier 'Install jars' (user: Rdornier)
2025-08-14 00:42:44,045 [ scc.merge] INFO Already up to date.
2025-08-14 00:42:44,045 [ scc.merge] INFO
2025-08-14 00:42:44,045 [ scc.merge] INFO Merged PRs:
2025-08-14 00:42:44,045 [ scc.merge] INFO - PR 8 github-actions[bot] 'Merge all feature branches into master'
2025-08-14 00:42:44,045 [ scc.merge] INFO
2025-08-14 00:42:44,045 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-14 00:42:44,045 [ scc.git] DEBUG Calling 'git remote'
Merge all submodules2025-08-14 00:42:44,495 [ scc.config] DEBUG Found github.token
2025-08-14 00:42:44,496 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:44,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:42:44,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:45,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:42:45,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:45,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-14 00:42:45,574 [ scc.gh] DEBUG 4281 remaining from 5000 (Reset at 01:08
2025-08-14 00:42:45,574 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-14 00:42:45,577 [ scc.git] DEBUG Check current status
2025-08-14 00:42:45,577 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-14 00:42:45,580 [ scc.git] DEBUG 964d8d3 merge master -Dorg -Snone
2025-08-14 00:42:45,580 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-14 00:42:45,622 [ scc.config] DEBUG Found remote.origin.url
2025-08-14 00:42:45,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:46,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer HTTP/1.1" 200 None
2025-08-14 00:42:46,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-14 00:42:46,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:47,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-14 00:42:47,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:47,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-14 00:42:47,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:48,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-14 00:42:48,050 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:42:48,091 [ scc.git] DEBUG Resetting...
2025-08-14 00:42:48,091 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-14 00:42:48,095 [ scc.git] DEBUG HEAD is now at 964d8d3 merge master -Dorg -Snone
2025-08-14 00:42:48,095 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-14 00:42:48,134 [ scc.git] DEBUG Check current status
2025-08-14 00:42:48,134 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-14 00:42:48,137 [ scc.git] DEBUG 964d8d3 merge master -Dorg -Snone
2025-08-14 00:42:48,137 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-14 00:42:48,176 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-14 00:42:48,176 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-14 00:42:48,176 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-14 00:42:48,176 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-14 00:42:48,176 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-14 00:42:48,176 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-08-14 00:42:48,176 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:42:48,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:48,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/pulls HTTP/1.1" 200 None
2025-08-14 00:42:48,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:49,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/issues/11 HTTP/1.1" 200 None
2025-08-14 00:42:49,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:49,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/issues/10 HTTP/1.1" 200 None
2025-08-14 00:42:49,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:50,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/issues/8 HTTP/1.1" 200 None
2025-08-14 00:42:50,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:50,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/commits/5e10ffb816b477ea1a10c02df04a5a72e10c6b68 HTTP/1.1" 200 None
2025-08-14 00:42:51,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:51,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/commits/5e10ffb816b477ea1a10c02df04a5a72e10c6b68/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:42:51,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:51,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/commits/5e10ffb816b477ea1a10c02df04a5a72e10c6b68 HTTP/1.1" 200 None
2025-08-14 00:42:52,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:52,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-zarr-pixel-buffer/statuses/5e10ffb816b477ea1a10c02df04a5a72e10c6b68?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:42:52,243 [ scc.repo] DEBUG - PR 8 github-actions[bot] 'Merge all feature branches into master'
2025-08-14 00:42:52,243 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:42:52,243 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:42:52,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:52,246 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:42:52,248 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:42:52,248 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:42:52,251 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:42:52,255 [ scc.git] DEBUG Already up to date.
2025-08-14 00:42:52,255 [ scc.git] DEBUG Calling 'git fetch origin pull/8/head'
2025-08-14 00:42:52,558 [ scc.git] DEBUG From https://github.com/ome/omero-zarr-pixel-buffer
2025-08-14 00:42:52,558 [ scc.git] DEBUG * branch refs/pull/8/head -> FETCH_HEAD
2025-08-14 00:42:52,563 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:42:52,563 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:42:52,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:52,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5e10ffb816b477ea1a10c02df04a5a72e10c6b68'
2025-08-14 00:42:52,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:52,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 8 (Merge all feature branches into master) 5e10ffb816b477ea1a10c02df04a5a72e10c6b68'
2025-08-14 00:42:52,572 [ scc.git] DEBUG Already up to date.
2025-08-14 00:42:52,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:42:52,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:42:52,765 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:42:52,805 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:42:52,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:42:52,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:42:52,846 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:42:52,850 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc5145f9290> has no local changes
2025-08-14 00:42:52,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-zarr-pixel-buffer
Excluded PRs:
- PR 11 dominikl 'Support for Zarr v3 (resp NGFF 0.5)' (stage: draft)
- PR 10 Rdornier 'Install jars' (user: Rdornier)
Already up to date.
Merged PRs:
- PR 8 github-actions[bot] 'Merge all feature branches into master'
Generated by OMERO-zarr-pixel-buffer-push#35 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/35/)'
2025-08-14 00:42:52,856 [ scc.git] DEBUG [detached HEAD e4c20d6] merge master -Dorg -Ssuccess-only
2025-08-14 00:42:52,857 [ scc.merge] INFO Repository: ome/omero-zarr-pixel-buffer
2025-08-14 00:42:52,857 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:42:52,857 [ scc.merge] INFO - PR 11 dominikl 'Support for Zarr v3 (resp NGFF 0.5)' (stage: draft)
2025-08-14 00:42:52,857 [ scc.merge] INFO - PR 10 Rdornier 'Install jars' (user: Rdornier)
2025-08-14 00:42:52,857 [ scc.merge] INFO Already up to date.
2025-08-14 00:42:52,857 [ scc.merge] INFO
2025-08-14 00:42:52,857 [ scc.merge] INFO Merged PRs:
2025-08-14 00:42:52,857 [ scc.merge] INFO - PR 8 github-actions[bot] 'Merge all feature branches into master'
2025-08-14 00:42:52,857 [ scc.merge] INFO
2025-08-14 00:42:52,857 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-14 00:42:52,857 [ scc.git] DEBUG Calling 'git remote'
Update component versions
grep: settings.gradle: No such file or directory
Commit all component version changes
HEAD detached from c633258
nothing to commit, working tree clean
2025-08-14 00:42:59,326 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-zarr-pixel-buffer/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS