Started by upstream project "Trigger" build number 9898Triggerjob/Trigger/STATUSsuccess-onlyMERGE_OPTIONS-vvv --no-ask --reset --comment69654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2master654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2master654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2masterhttps://github.com/ome/jenkins-library-recursivemerge.git6914c447b103ce7b86836b4ed22786915d8fdfc29814c447b103ce7b86836b4ed22786915d8fdfc298refs/remotes/origin/master14c447b103ce7b86836b4ed22786915d8fdfc29814c447b103ce7b86836b4ed22786915d8fdfc298refs/remotes/origin/master14c447b103ce7b86836b4ed22786915d8fdfc29814c447b103ce7b86836b4ed22786915d8fdfc298refs/remotes/origin/masterhttps://github.com/ome/omero-zarr-pixel-buffer.githttps://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/69/artifacthttps://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/changeshttps://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/69/https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/69/testReportfalseversion.tsvversion.tsvbuild/version.tsvfalse#69123444118507OMERO-zarr-pixel-buffer-push #6969false692853SUCCESS1789600473638https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/69/falseStarted by upstream project "Trigger" build number 100100Triggerjob/Trigger/STATUSsuccess-onlyMERGE_OPTIONS-vvv --no-ask --reset --comment70654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2master654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2master654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2masterhttps://github.com/ome/jenkins-library-recursivemerge.git70bcde203d9bbfe64d9fdb111f87ce0c073ecd8d9bbcde203d9bbfe64d9fdb111f87ce0c073ecd8d9brefs/remotes/origin/masterbcde203d9bbfe64d9fdb111f87ce0c073ecd8d9bbcde203d9bbfe64d9fdb111f87ce0c073ecd8d9brefs/remotes/origin/masterbcde203d9bbfe64d9fdb111f87ce0c073ecd8d9bbcde203d9bbfe64d9fdb111f87ce0c073ecd8d9brefs/remotes/origin/masterhttps://github.com/ome/omero-zarr-pixel-buffer.gitversion.tsvversion.tsvbuild/version.tsvfalse#70118500118507OMERO-zarr-pixel-buffer-push #7070false702907SUCCESS1789721211932https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/70/README.mdc30c610bff7f2083d72f9d1d36cd1217193f2f211787334076000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comRemove libblosc as a system requirement of omero-zarr-pixel-buffer Pre-compiled versions of the libblosc library for different operating systems and architectures are shipped as part of the blosc-java dependency 2026-08-21 18:41:16 +0100c30c610bff7f2083d72f9d1d36cd1217193f2f21Remove libblosc as a system requirement of omero-zarr-pixel-buffereditREADME.mdREADME.md71d9ae40c041b79a00ec2d3b1323b58b9f56ae111787334129000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comRemove hardcoded list of dependency The switch from jzarr to zarr-java has changed the dependency tree of this component. As the goal is to include this component natively with OMERO.server in the future, a manual installation should be unnecessary 2026-08-21 18:42:09 +010071d9ae40c041b79a00ec2d3b1323b58b9f56ae11Remove hardcoded list of dependencyeditREADME.mdREADME.mda5ac22e534d353b1ba846d407246c1c103898b801787334291000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comUpdate README to document support for OME-Zarr 0.4 and OME-Zarr 0.5 2026-08-21 18:44:51 +0100a5ac22e534d353b1ba846d407246c1c103898b80Update README to document support for OME-Zarr 0.4 and OME-Zarr 0.5editREADME.mdREADME.md872900833c6a3d0ac7cbb0efb1725618dd0e11761787334311000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comUpdate README to document S3 requirements and entityId 3 vs 4 2026-08-21 18:45:11 +0100872900833c6a3d0ac7cbb0efb1725618dd0e1176Update README to document S3 requirements and entityId 3 vs 4editREADME.mdREADME.mdc8d930af5897b6245d612ea7adc73c833944bf501787592720000https://merge-ci.openmicroscopy.org/jenkins/user/noreplynoreplynoreply@github.comApply suggestions from code review Co-authored-by: Kevin Kozlowski <kevin@glencoesoftware.com> 2026-08-24 18:32:00 +0100c8d930af5897b6245d612ea7adc73c833944bf50Apply suggestions from code revieweditREADME.mdsrc/main/java/com/glencoesoftware/omero/zarr/ZarrStore.javasrc/test/java/com/glencoesoftware/omero/zarr/ZarrStoreTest.javabae2ba4655622ea21c48db921e522e2cc3dffeb61788200947000https://merge-ci.openmicroscopy.org/jenkins/user/kevinkevinkevin@glencoesoftware.comremove trailing slashes 2026-08-31 14:29:07 -0400bae2ba4655622ea21c48db921e522e2cc3dffeb6remove trailing slasheseditsrc/main/java/com/glencoesoftware/omero/zarr/ZarrStore.javaeditsrc/test/java/com/glencoesoftware/omero/zarr/ZarrStoreTest.java.github/workflows/build.yml647ea83584a916bf5eba17abcce701ee3de5b3ca1788270143000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comAdd release workflow to generate GitHub release on tag 2026-09-01 14:42:23 +0100647ea83584a916bf5eba17abcce701ee3de5b3caAdd release workflow to generate GitHub release on tagedit.github/workflows/build.ymlbuild.gradle3871f268c7538788abd3be7e83ef64d3919cd4411788270190000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comRelease omero-zarr-pixel-buffer 0.7.0 2026-09-01 14:43:10 +01003871f268c7538788abd3be7e83ef64d3919cd441Release omero-zarr-pixel-buffer 0.7.0editbuild.gradlebuild.gradle5b8884fe93dc4b9e384eeadd9ccf18364c1ab6951788270227000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comBump version to 0.7.1-SNAPSHOT 2026-09-01 14:43:47 +01005b8884fe93dc4b9e384eeadd9ccf18364c1ab695Bump version to 0.7.1-SNAPSHOTeditbuild.gradlesrc/main/java/com/glencoesoftware/omero/zarr/ZarrPixelBuffer.javae61a3865f58729cb2a00b0f378f671721a3092a61788436856000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comRestore partial compatibility for OME-Zarr 0.2 label images The usage of Utils.castToListOfObjectMap() in ZarrPixelBuffer.getAxesOrder() means an IllegalArgumentException exception is thrown if the axes key is missing from the multiscales metadata. This is not an issue for OME-Zarr 0.4 and 0.5 datasets as this key is mandatory as per the specification but breaks the reading of OME-Zarr 0.2 datasets as this specification was introduced in version 0.3 of the OME-Zarr specification. As omero-zarr-pixel-buffer has been historically used for reading OME-Zarr 0.2 label images, this proposes to restore some form of backwards compatibility by adding a special handling for multiscale groups where the version key is exactly 0.2. 2026-09-03 13:00:56 +0100e61a3865f58729cb2a00b0f378f671721a3092a6Restore partial compatibility for OME-Zarr 0.2 label imageseditsrc/main/java/com/glencoesoftware/omero/zarr/ZarrPixelBuffer.javasrc/main/java/com/glencoesoftware/omero/zarr/ZarrPixelBuffer.java3605c6334f7c43e3ff54a1c81625f0e9e93615a81788508208000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comAdd support for multiscales datasets with no version and axes Only throws an exception if a multiscales group has an explicit version of 0.4 or 0.5 and no axes metadata. 2026-09-04 08:50:08 +01003605c6334f7c43e3ff54a1c81625f0e9e93615a8Add support for multiscales datasets with no version and axeseditsrc/main/java/com/glencoesoftware/omero/zarr/ZarrPixelBuffer.javasrc/main/java/com/glencoesoftware/omero/zarr/ZarrStore.java99bd0515ccbaa5ebc5f3264e95b73e8dea4e72d01788778149000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comRelax .zarr extension requirement Prevent ZarrStore from throwing an IllegalArgumentException on construction when working with an OME-Zarr dataset without a .zarr extension as this is not a requirement of the current specification. Instead, use the extension when available to derive the name of the dataset and use the full path otherwise. 2026-09-07 11:49:09 +010099bd0515ccbaa5ebc5f3264e95b73e8dea4e72d0Relax .zarr extension requirementeditsrc/main/java/com/glencoesoftware/omero/zarr/ZarrStore.javabuild.gradle4b6dbee3741150881c01c9929abd8d1961bd9dc81789030013000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comBump release version to 0.7.1 2026-09-10 09:46:53 +01004b6dbee3741150881c01c9929abd8d1961bd9dc8Bump release version to 0.7.1editbuild.gradlebuild.gradlebcde203d9bbfe64d9fdb111f87ce0c073ecd8d9b1789030049000https://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonsbesson@glencoesoftware.comBump version to 0.7.2-SNAPSHOT 2026-09-10 09:47:29 +0100bcde203d9bbfe64d9fdb111f87ce0c073ecd8d9bBump version to 0.7.2-SNAPSHOTeditbuild.gradlegithttps://merge-ci.openmicroscopy.org/jenkins/user/noreplynoreplyhttps://merge-ci.openmicroscopy.org/jenkins/user/sbessonsbessonhttps://merge-ci.openmicroscopy.org/jenkins/user/kevinkevinfalse71https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/71/69https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/69/Started by upstream project "Trigger" build number 9797Triggerjob/Trigger/STATUSsuccess-onlyMERGE_OPTIONS-vvv --no-ask --reset --comment68654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2master654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2master654fab96d71411fab33e55b79057bcbf94eef8a2654fab96d71411fab33e55b79057bcbf94eef8a2masterhttps://github.com/ome/jenkins-library-recursivemerge.git6814c447b103ce7b86836b4ed22786915d8fdfc29814c447b103ce7b86836b4ed22786915d8fdfc298refs/remotes/origin/master14c447b103ce7b86836b4ed22786915d8fdfc29814c447b103ce7b86836b4ed22786915d8fdfc298refs/remotes/origin/master14c447b103ce7b86836b4ed22786915d8fdfc29814c447b103ce7b86836b4ed22786915d8fdfc298refs/remotes/origin/masterhttps://github.com/ome/omero-zarr-pixel-buffer.gitversion.tsvversion.tsvbuild/version.tsvfalse#68101967118507OMERO-zarr-pixel-buffer-push #6868false682809SUCCESS1789514031158https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/68/false69https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/69/67https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-zarr-pixel-buffer-push/67/