Started by upstream project "Trigger" build number 92
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-linkcheck
[BIOFORMATS-linkcheck] $ /bin/bash -xe /tmp/jenkins3057205986636605619.sh
+ TAG=snoopycrimecop/bioformats:merge_ci
+ sudo docker run --rm -w /bio-formats-build/bio-formats-documentation --entrypoint mvn snoopycrimecop/bioformats:merge_ci test -DskipSphinxTests=false -Dome-model.uri=/bio-formats-build/ome-model/docs/sphinx/target/sphinx/html
[[1;34mINFO[m] Scanning for projects...
[[1;33mWARNING[m]
[[1;33mWARNING[m] Some problems were encountered while building the effective model for ome:bio-formats-documentation:jar:8.0.0-SNAPSHOT
[[1;33mWARNING[m] 'build.plugins.plugin.(groupId:artifactId)' must be unique but found duplicate declaration of plugin org.codehaus.mojo:exec-maven-plugin @ line 369, column 15
[[1;33mWARNING[m]
[[1;33mWARNING[m] It is highly recommended to fix these problems because they threaten the stability of your build.
[[1;33mWARNING[m]
[[1;33mWARNING[m] For this reason, future Maven versions might no longer support building such malformed projects.
[[1;33mWARNING[m]
[[1;33mWARNING[m] The project ome:bio-formats-documentation:jar:8.0.0-SNAPSHOT uses prerequisites which is only intended for maven-plugin projects but not for non maven-plugin projects. For such purposes you should use the maven-enforcer-plugin. See https://maven.apache.org/enforcer/enforcer-rules/requireMavenVersion.html
[[1;34mINFO[m]
[[1;34mINFO[m] [1m-------------------< [0;36mome:bio-formats-documentation[0;1m >--------------------[m
[[1;34mINFO[m] [1mBuilding Bio-Formats documentation 8.0.0-SNAPSHOT[m
[[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:copy-resources[m [1m(copy-configuration)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
[[1;34mINFO[m] Copying 1 resource
[[1;34mINFO[m] Copying 114 resources
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mbuild-helper-maven-plugin:3.0.0:parse-version[m [1m(parse-version)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-dependency-plugin:3.1.1:unpack[m [1m(unpack-ome-xml)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] Configured Artifact: org.openmicroscopy:ome-xml:6.3.7-SNAPSHOT:jar
[[1;34mINFO[m] Configured Artifact: ome:formats-api:sources:8.0.0-SNAPSHOT:jar
[[1;34mINFO[m] Configured Artifact: ome:formats-bsd:sources:8.0.0-SNAPSHOT:jar
[[1;34mINFO[m] Configured Artifact: ome:formats-gpl:sources:8.0.0-SNAPSHOT:jar
[[1;34mINFO[m] Configured Artifact: ome:bio-formats-examples:sources:8.0.0-SNAPSHOT:jar
[[1;34mINFO[m] Unpacking /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/ome-xml with includes "" and excludes ""
[[1;34mINFO[m] Unpacking /home/build/.m2/repository/ome/formats-api/8.0.0-SNAPSHOT/formats-api-8.0.0-SNAPSHOT-sources.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/source/formats-api with includes "" and excludes ""
[[1;34mINFO[m] Unpacking /home/build/.m2/repository/ome/formats-bsd/8.0.0-SNAPSHOT/formats-bsd-8.0.0-SNAPSHOT-sources.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/source/formats-bsd with includes "" and excludes ""
[[1;34mINFO[m] Unpacking /home/build/.m2/repository/ome/formats-gpl/8.0.0-SNAPSHOT/formats-gpl-8.0.0-SNAPSHOT-sources.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/source/formats-gpl with includes "" and excludes ""
[[1;34mINFO[m] Unpacking /home/build/.m2/repository/ome/bio-formats-examples/8.0.0-SNAPSHOT/bio-formats-examples-8.0.0-SNAPSHOT-sources.jar to /bio-formats-build/bio-formats-documentation/target/sphinx/developers/examples with includes "" and excludes ""
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
[[1;34mINFO[m] Copying 10 resources
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:compile[m [1m(default-compile)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] Nothing to compile - all classes are up to date
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mexec-maven-plugin:1.6.0:exec[m [1m(gen-meta-support)[m @ [36mbio-formats-documentation[0;1m ---[m
Parsing AFIReader
Parsing AIMReader
Parsing AliconaReader
Parsing AmiraReader
Parsing AnalyzeReader
Parsing APLReader
Parsing ARFReader
Parsing BaseZeissReader
Parsing BDReader
Parsing BioRadGelReader
Parsing BioRadReader
Parsing BioRadSCNReader
Parsing BrukerReader
Parsing BurleighReader
Parsing CanonRawReader
Parsing CellomicsReader
Parsing CellSensReader
Parsing CellVoyagerReader
Parsing CellWorxReader
Parsing ColumbusReader
Parsing CV7000Reader
Parsing DeltavisionReader
Parsing DNGReader
Parsing Ecat7Reader
Parsing FEIReader
Parsing FEITiffReader
Parsing FlexReader
Parsing FluoviewReader
Parsing FujiReader
Parsing FV1000Reader
Parsing GatanDM2Reader
Parsing GatanReader
Parsing GelReader
Parsing HamamatsuVMSReader
Parsing HISReader
Parsing HitachiReader
Parsing HRDGDFReader
Parsing I2IReader
Parsing ImaconReader
Parsing ImagicReader
Parsing ImarisHDFReader
Parsing ImarisReader
Parsing ImarisTiffReader
Parsing IMODReader
Parsing ImprovisionTiffReader
Parsing ImspectorReader
Parsing InCell3000Reader
Parsing InCellReader
Parsing INRReader
Parsing InveonReader
Parsing IonpathMIBITiffReader
Parsing IPLabReader
Parsing IPWReader
Parsing IvisionReader
Parsing JEOLReader
Parsing JPKReader
Parsing JPXReader
Parsing KhorosReader
Parsing KodakReader
Parsing L2DReader
Parsing LeicaReader
Parsing LeicaSCNReader
Parsing LEOReader
Parsing LiFlimReader
Parsing LIFReader
Parsing LIMReader
Parsing LOFReader
Parsing MetamorphReader
Parsing MetamorphTiffReader
Parsing MetaxpressTiffReader
Parsing MIASReader
Parsing MicroCTReader
Parsing MikroscanTiffReader
Parsing MINCReader
Parsing MolecularImagingReader
Parsing MRCReader
Parsing MRWReader
Parsing NAFReader
Parsing ND2Reader
Parsing NDPIReader
Parsing NDPISReader
Parsing NiftiReader
Parsing NikonElementsTiffReader
Parsing NikonReader
Parsing NikonTiffReader
Parsing OIRReader
Parsing OlympusTileReader
Parsing OpenlabRawReader
Parsing OpenlabReader
Parsing OperettaReader
Parsing OxfordInstrumentsReader
Parsing PCIReader
Parsing PCORAWReader
Parsing PDSReader
Parsing PerkinElmerReader
Parsing PhotoshopTiffReader
Parsing PovrayReader
Parsing PQBinReader
Parsing PrairieReader
Parsing PSDReader
Parsing PyramidTiffReader
Parsing QuesantReader
Parsing RCPNLReader
Parsing RHKReader
Parsing SBIGReader
Parsing ScanrReader
Parsing SDTReader
Parsing SeikoReader
Parsing SEQReader
Parsing SIFReader
Parsing SimplePCITiffReader
Parsing SISReader
Parsing SlidebookReader
Parsing SlidebookTiffReader
Parsing SMCameraReader
Parsing SPCReader
Parsing SPEReader
Parsing SpiderReader
Parsing SVSReader
Parsing TargaReader
Parsing TCSReader
Parsing TecanReader
Parsing TillVisionReader
Parsing TopometrixReader
Parsing TrestleReader
Parsing UBMReader
Parsing UnisokuReader
Parsing VarianFDFReader
Parsing VectraReader
Parsing VeecoReader
Parsing VentanaReader
Parsing VGSAMReader
Parsing VisitechReader
Parsing VolocityClippingReader
Parsing VolocityReader
Parsing WATOPReader
Parsing XLEFReader
Parsing ZeissCZIReader
Parsing ZeissLMSReader
Parsing ZeissLSMReader
Parsing ZeissTIFFReader
Parsing ZeissZVIReader
Parsing APNGReader
Parsing AVIReader
Parsing BaseTiffReader
Parsing BDVReader
Parsing BIFormatReader
Parsing BMPReader
Parsing CellH5Reader
Parsing DicomReader
Parsing EPSReader
Parsing FakeReader
Parsing FilePatternReader
Parsing FitsReader
Parsing FlowSightReader
Parsing GIFReader
Parsing ICSReader
Parsing IM3Reader
Parsing ImageIOReader
Parsing JPEG2000Reader
Parsing JPEGReader
Parsing KLBReader
Parsing MicromanagerReader
Parsing MinimalTiffReader
Parsing MNGReader
Parsing NRRDReader
Parsing OBFReader
Parsing OMETiffReader
Parsing OMEXMLReader
Parsing PCXReader
Parsing PGMReader
Parsing PictReader
Parsing QTReader
Parsing SlideBook7Reader
Parsing TextReader
Parsing TiffDelegateReader
Parsing TiffJAIReader
Parsing TiffReader
Parsing TileJPEGReader
Parsing ZipReader
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mexec-maven-plugin:1.6.0:java[m [1m(gen-structure-table)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mexec-maven-plugin:1.6.0:java[m [1m(gen-metadata-ratings)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mexec-maven-plugin:1.6.0:java[m [1m(gen-format-pages)[m @ [36mbio-formats-documentation[0;1m ---[m
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/3i-slidebook.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/3i-slidebook-7.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/photoshop-psd.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/aim.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/alicona-3d.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/amnis-flowsight.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/amersham-biosciences-gel.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/amira-mesh.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/analyze-75.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/abd-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/andor-sif.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/animated-png.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/aperio-afi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/aperio-svs-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/applied-precision-cellworx.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/avi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/axon-raw-format.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/bd-pathway.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/becker-hickl-fifo.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/becker-hickl-spcimage.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/big-data-viewer.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/bio-rad-gel.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/bio-rad-pic.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/bio-rad-scn.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/bitplane-imaris.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/bruker-mri.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/burleigh.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/canon-dng.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/cellh5.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/cellomics.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/cellsens-vsi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/cellvoyager.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/cv7000.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/deltavision.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/dicom.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ecat7.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/eps.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/evotecperkinelmer-opera-flex.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/fei-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/fei.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/fits.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/gatan-digital-micrograph-2.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/gatan-digital-micrograph.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ge-microct.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/gif.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/hamamatsu-aquacosmos-naf.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/hamamatsu-his.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/hamamatsu-ndpi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/hamamatsu-vms.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/hitachi-s-4800.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/i2i.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ics.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/imacon.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/imagepro-sequence.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/imagepro-workspace.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/imagic.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/imod.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/improvision-openlab-liff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/improvision-openlab-raw.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/improvision-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/imspector-obf.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/incell-1000.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/incell-3000.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/inr.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/inveon.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ionpath-mibi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/iplab-mac.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/iplab.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/jeol.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/jpeg-2000.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/jpeg.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/jpk.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/jpx.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/keller-lab-block.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/khoros-viff-bitmap.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/kodak-bip.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/lambert-instruments-flim.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/leica-lif.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/leica-lof.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/leica-xlef.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/lavision-imspector.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/leica-lcs-lei.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/leica-scn.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/leo.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/li-cor-l2d.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/lim.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/metamorph-75-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/metamorph-stack-stk.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/metaxpress.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/mias-maia-scientific.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/micro-manager.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/mikroscan-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/minc-mri.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/minolta-mrw.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/mng.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/molecular-imaging.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/mrc.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/nef.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/nifti.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/nikon-elements-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/nikon-ez-c1-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/nikon-nis-elements-nd2.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/nrrd.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-cellrapl.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-fluoview-fv1000.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-fluoview-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-oir.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-omp2info.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-scanr.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/olympus-sis-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/omero-pyramid.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ome-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ome-xml.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/oxford-instruments.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/pcx-pc-paintbrush.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/pcoraw.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/picoquant-bin.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/perkinelmer-columbus.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/perkin-elmer-densitometer.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/perkinelmer-nuance.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/perkinelmer-operetta.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/perkinelmer-ultraview.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/pgm.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/photoshop-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/pict-macintosh-picture.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/png.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/prairie-tech-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/princeton-instruments-spe.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/quesant.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/quicktime-movie.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/rhk.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/sbig.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/seiko.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/simplepci-hcimage-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/simplepci-hcimage.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/sm-camera.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/spider.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/targa.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/tecan-spark-cyto-workspace.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/text.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/tillphotonics-tillvision.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/topometrix.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/trestle.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ubm.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/unisoku.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/varian-fdf.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/vectra-qptiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/veeco-afm.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/ventana-bif.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/vg-sam.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/visitech-xys.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/volocity-library-clipping.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/volocity.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/wa-top.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/windows-bitmap.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/zeiss-axio-csm.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/zeiss-axiovision-tiff.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/zeiss-axiovision-zvi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/zeiss-czi.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/formats/zeiss-lsm.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/supported-formats.rst: done.
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mexec-maven-plugin:1.6.0:java[m [1m(gen-metadata-summary)[m @ [36mbio-formats-documentation[0;1m ---[m
Parsing configuration data
Arc
BooleanAnnotation
Channel
CommentAnnotation
Dataset
Detector
DetectorSettings
Dichroic
DoubleAnnotation
Ellipse
Experiment
Experimenter
ExperimenterGroup
Filament
FileAnnotation
Filter
FilterSet
Folder
Image
ImagingEnvironment
Instrument
Label
Laser
LightEmittingDiode
LightPath
Line
ListAnnotation
LongAnnotation
Mask
MicrobeamManipulation
MicrobeamManipulationLightSourceSettings
Microscope
Objective
ObjectiveSettings
Pixels
Plane
Plate
PlateAcquisition
Point
Polygon
Polyline
Project
ROI
Reagent
Rectangle
Screen
StageLabel
TagAnnotation
TermAnnotation
TiffData
TimestampAnnotation
TransmittanceRange
UUID
Well
WellSample
XMLAnnotation
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata-summary.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/AFIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/AIMReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/APLReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/APNGReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ARFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/AVIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/AliconaReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/AmiraReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/AnalyzeReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BDReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BDVReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BIFormatReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BMPReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BaseTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BaseZeissReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BioRadGelReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BioRadReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BioRadSCNReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BrukerReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/BurleighReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CV7000Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CanonRawReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CellH5Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CellSensReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CellVoyagerReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CellWorxReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/CellomicsReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ColumbusReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/DNGReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/DeltavisionReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/DicomReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/EPSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/Ecat7Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FEIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FEITiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FV1000Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FakeReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FilePatternReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FitsReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FlexReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FlowSightReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FluoviewReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/FujiReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/GIFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/GatanDM2Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/GatanReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/GelReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/HISReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/HRDGDFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/HamamatsuVMSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/HitachiReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/I2IReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ICSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/IM3Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/IMODReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/INRReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/IPLabReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/IPWReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImaconReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImageIOReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImagicReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImarisHDFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImarisReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImarisTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImprovisionTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ImspectorReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/InCell3000Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/InCellReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/InveonReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/IonpathMIBITiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/IvisionReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/JEOLReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/JPEG2000Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/JPEGReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/JPKReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/JPXReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/KLBReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/KhorosReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/KodakReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/L2DReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LEOReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LIFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LIMReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LOFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LeicaReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LeicaSCNReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/LiFlimReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MIASReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MINCReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MNGReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MRCReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MRWReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MetamorphReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MetamorphTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MetaxpressTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MicroCTReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MicromanagerReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MikroscanTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MinimalTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/MolecularImagingReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NAFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ND2Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NDPIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NDPISReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NRRDReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NiftiReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NikonElementsTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NikonReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NikonTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OBFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OIRReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OMETiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OMEXMLReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OlympusTileReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OpenlabRawReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OpenlabReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OperettaReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OxfordInstrumentsReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PCIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PCORAWReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PCXReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PDSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PGMReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PQBinReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PSDReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PerkinElmerReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PhotoshopTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PictReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PovrayReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PrairieReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PyramidTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/QTReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/QuesantReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/RCPNLReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/RHKReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SBIGReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SDTReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SEQReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SIFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SISReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SMCameraReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SPCReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SPEReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SVSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ScanrReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SeikoReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SimplePCITiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SlideBook7Reader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SlidebookReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SlidebookTiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SpiderReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TCSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TargaReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TecanReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TextReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TiffDelegateReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TiffJAIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TiffReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TileJPEGReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TillVisionReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TopometrixReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TrestleReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/UBMReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/UnisokuReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VGSAMReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VarianFDFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VectraReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VeecoReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VentanaReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VisitechReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VolocityClippingReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VolocityReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/WATOPReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/XLEFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissCZIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissLMSReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissLSMReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissTIFFReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissZVIReader.rst: done.
Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZipReader.rst: done.
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
[[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bio-formats-documentation/src/test/resources
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] No sources to compile
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-documentation[0;1m ---[m
[[1;34mINFO[m] No tests to run.
[[1;34mINFO[m]
[[1;34mINFO[m] [1m--- [0;32mexec-maven-plugin:1.6.0:exec[m [1m(sphinx-linkcheck)[m @ [36mbio-formats-documentation[0;1m ---[m
Running Sphinx v7.3.7
making output directory... done
loading pickled environment... done
/bio-formats-build/venv/lib/python3.9/site-packages/sphinx/builders/linkcheck.py:86: RemovedInSphinx80Warning: The default value for 'linkcheck_report_timeouts_as_broken' will change to False in Sphinx 8, meaning that request timeouts will be reported with a new 'timeout' status, instead of as 'broken'. This is intended to provide more detail as to the failure mode. See https://github.com/sphinx-doc/sphinx/issues/11868 for details.
warnings.warn(deprecation_msg, RemovedInSphinx80Warning, stacklevel=1)
building [mo]: targets for 0 po files that are out of date
writing output...
building [linkcheck]: targets for 423 source files that are out of date
updating environment: 0 added, 344 changed, 0 removed
reading sources... [ 0%] formats/3i-slidebook
reading sources... [ 1%] formats/3i-slidebook-7
reading sources... [ 1%] formats/abd-tiff
reading sources... [ 1%] formats/aim
reading sources... [ 1%] formats/alicona-3d
reading sources... [ 2%] formats/amersham-biosciences-gel
reading sources... [ 2%] formats/amira-mesh
reading sources... [ 2%] formats/amnis-flowsight
reading sources... [ 3%] formats/analyze-75
reading sources... [ 3%] formats/andor-sif
reading sources... [ 3%] formats/animated-png
reading sources... [ 3%] formats/aperio-afi
reading sources... [ 4%] formats/aperio-svs-tiff
reading sources... [ 4%] formats/applied-precision-cellworx
reading sources... [ 4%] formats/avi
reading sources... [ 5%] formats/axon-raw-format
reading sources... [ 5%] formats/bd-pathway
reading sources... [ 5%] formats/becker-hickl-fifo
reading sources... [ 6%] formats/becker-hickl-spcimage
reading sources... [ 6%] formats/big-data-viewer
reading sources... [ 6%] formats/bio-rad-gel
reading sources... [ 6%] formats/bio-rad-pic
reading sources... [ 7%] formats/bio-rad-scn
reading sources... [ 7%] formats/bitplane-imaris
reading sources... [ 7%] formats/bruker-mri
reading sources... [ 8%] formats/burleigh
reading sources... [ 8%] formats/canon-dng
reading sources... [ 8%] formats/cellh5
reading sources... [ 8%] formats/cellomics
reading sources... [ 9%] formats/cellsens-vsi
reading sources... [ 9%] formats/cellvoyager
reading sources... [ 9%] formats/cv7000
reading sources... [ 10%] formats/dataset-table
reading sources... [ 10%] formats/deltavision
reading sources... [ 10%] formats/dicom
reading sources... [ 10%] formats/ecat7
reading sources... [ 11%] formats/eps
reading sources... [ 11%] formats/evotecperkinelmer-opera-flex
reading sources... [ 11%] formats/fei
reading sources... [ 12%] formats/fei-tiff
reading sources... [ 12%] formats/fits
reading sources... [ 12%] formats/gatan-digital-micrograph
reading sources... [ 12%] formats/gatan-digital-micrograph-2
reading sources... [ 13%] formats/ge-microct
reading sources... [ 13%] formats/gif
reading sources... [ 13%] formats/hamamatsu-aquacosmos-naf
reading sources... [ 14%] formats/hamamatsu-his
reading sources... [ 14%] formats/hamamatsu-ndpi
reading sources... [ 14%] formats/hamamatsu-vms
reading sources... [ 15%] formats/hitachi-s-4800
reading sources... [ 15%] formats/i2i
reading sources... [ 15%] formats/ics
reading sources... [ 15%] formats/imacon
reading sources... [ 16%] formats/imagepro-sequence
reading sources... [ 16%] formats/imagepro-workspace
reading sources... [ 16%] formats/imagic
reading sources... [ 17%] formats/imod
reading sources... [ 17%] formats/improvision-openlab-liff
reading sources... [ 17%] formats/improvision-openlab-raw
reading sources... [ 17%] formats/improvision-tiff
reading sources... [ 18%] formats/imspector-obf
reading sources... [ 18%] formats/incell-1000
reading sources... [ 18%] formats/incell-3000
reading sources... [ 19%] formats/inr
reading sources... [ 19%] formats/inveon
reading sources... [ 19%] formats/ionpath-mibi
reading sources... [ 19%] formats/iplab
reading sources... [ 20%] formats/iplab-mac
reading sources... [ 20%] formats/jeol
reading sources... [ 20%] formats/jpeg
reading sources... [ 21%] formats/jpeg-2000
reading sources... [ 21%] formats/jpk
reading sources... [ 21%] formats/jpx
reading sources... [ 22%] formats/keller-lab-block
reading sources... [ 22%] formats/khoros-viff-bitmap
reading sources... [ 22%] formats/kodak-bip
reading sources... [ 22%] formats/lambert-instruments-flim
reading sources... [ 23%] formats/lavision-imspector
reading sources... [ 23%] formats/leica-lcs-lei
reading sources... [ 23%] formats/leica-lif
reading sources... [ 24%] formats/leica-lof
reading sources... [ 24%] formats/leica-scn
reading sources... [ 24%] formats/leica-xlef
reading sources... [ 24%] formats/leo
reading sources... [ 25%] formats/li-cor-l2d
reading sources... [ 25%] formats/lim
reading sources... [ 25%] formats/metamorph-75-tiff
reading sources... [ 26%] formats/metamorph-stack-stk
reading sources... [ 26%] formats/metaxpress
reading sources... [ 26%] formats/mias-maia-scientific
reading sources... [ 26%] formats/micro-manager
reading sources... [ 27%] formats/mikroscan-tiff
reading sources... [ 27%] formats/minc-mri
reading sources... [ 27%] formats/minolta-mrw
reading sources... [ 28%] formats/mng
reading sources... [ 28%] formats/molecular-imaging
reading sources... [ 28%] formats/mrc
reading sources... [ 28%] formats/nef
reading sources... [ 29%] formats/nifti
reading sources... [ 29%] formats/nikon-elements-tiff
reading sources... [ 29%] formats/nikon-ez-c1-tiff
reading sources... [ 30%] formats/nikon-nis-elements-nd2
reading sources... [ 30%] formats/nrrd
reading sources... [ 30%] formats/olympus-cellrapl
reading sources... [ 31%] formats/olympus-fluoview-fv1000
reading sources... [ 31%] formats/olympus-fluoview-tiff
reading sources... [ 31%] formats/olympus-oir
reading sources... [ 31%] formats/olympus-omp2info
reading sources... [ 32%] formats/olympus-scanr
reading sources... [ 32%] formats/olympus-sis-tiff
reading sources... [ 32%] formats/ome-tiff
reading sources... [ 33%] formats/ome-xml
reading sources... [ 33%] formats/omero-pyramid
reading sources... [ 33%] formats/oxford-instruments
reading sources... [ 33%] formats/pcoraw
reading sources... [ 34%] formats/pcx-pc-paintbrush
reading sources... [ 34%] formats/perkin-elmer-densitometer
reading sources... [ 34%] formats/perkinelmer-columbus
reading sources... [ 35%] formats/perkinelmer-nuance
reading sources... [ 35%] formats/perkinelmer-operetta
reading sources... [ 35%] formats/perkinelmer-ultraview
reading sources... [ 35%] formats/pgm
reading sources... [ 36%] formats/photoshop-psd
reading sources... [ 36%] formats/photoshop-tiff
reading sources... [ 36%] formats/picoquant-bin
reading sources... [ 37%] formats/pict-macintosh-picture
reading sources... [ 37%] formats/png
reading sources... [ 37%] formats/prairie-tech-tiff
reading sources... [ 38%] formats/princeton-instruments-spe
reading sources... [ 38%] formats/quesant
reading sources... [ 38%] formats/quicktime-movie
reading sources... [ 38%] formats/rhk
reading sources... [ 39%] formats/sbig
reading sources... [ 39%] formats/seiko
reading sources... [ 39%] formats/simplepci-hcimage
reading sources... [ 40%] formats/simplepci-hcimage-tiff
reading sources... [ 40%] formats/sm-camera
reading sources... [ 40%] formats/spider
reading sources... [ 40%] formats/targa
reading sources... [ 41%] formats/tecan-spark-cyto-workspace
reading sources... [ 41%] formats/text
reading sources... [ 41%] formats/tiff
reading sources... [ 42%] formats/tillphotonics-tillvision
reading sources... [ 42%] formats/topometrix
reading sources... [ 42%] formats/trestle
reading sources... [ 42%] formats/ubm
reading sources... [ 43%] formats/unisoku
reading sources... [ 43%] formats/varian-fdf
reading sources... [ 43%] formats/vectra-qptiff
reading sources... [ 44%] formats/veeco-afm
reading sources... [ 44%] formats/ventana-bif
reading sources... [ 44%] formats/vg-sam
reading sources... [ 44%] formats/visitech-xys
reading sources... [ 45%] formats/volocity
reading sources... [ 45%] formats/volocity-library-clipping
reading sources... [ 45%] formats/wa-top
reading sources... [ 46%] formats/windows-bitmap
reading sources... [ 46%] formats/zeiss-axio-csm
reading sources... [ 46%] formats/zeiss-axiovision-tiff
reading sources... [ 47%] formats/zeiss-axiovision-zvi
reading sources... [ 47%] formats/zeiss-czi
reading sources... [ 47%] formats/zeiss-lsm
reading sources... [ 47%] metadata-summary
reading sources... [ 48%] metadata/AFIReader
reading sources... [ 48%] metadata/AIMReader
reading sources... [ 48%] metadata/APLReader
reading sources... [ 49%] metadata/APNGReader
reading sources... [ 49%] metadata/ARFReader
reading sources... [ 49%] metadata/AVIReader
reading sources... [ 49%] metadata/AliconaReader
reading sources... [ 50%] metadata/AmiraReader
reading sources... [ 50%] metadata/AnalyzeReader
reading sources... [ 50%] metadata/BDReader
reading sources... [ 51%] metadata/BDVReader
reading sources... [ 51%] metadata/BIFormatReader
reading sources... [ 51%] metadata/BMPReader
reading sources... [ 51%] metadata/BaseTiffReader
reading sources... [ 52%] metadata/BaseZeissReader
reading sources... [ 52%] metadata/BioRadGelReader
reading sources... [ 52%] metadata/BioRadReader
reading sources... [ 53%] metadata/BioRadSCNReader
reading sources... [ 53%] metadata/BrukerReader
reading sources... [ 53%] metadata/BurleighReader
reading sources... [ 53%] metadata/CV7000Reader
reading sources... [ 54%] metadata/CanonRawReader
reading sources... [ 54%] metadata/CellH5Reader
reading sources... [ 54%] metadata/CellSensReader
reading sources... [ 55%] metadata/CellVoyagerReader
reading sources... [ 55%] metadata/CellWorxReader
reading sources... [ 55%] metadata/CellomicsReader
reading sources... [ 56%] metadata/ColumbusReader
reading sources... [ 56%] metadata/DNGReader
reading sources... [ 56%] metadata/DeltavisionReader
reading sources... [ 56%] metadata/DicomReader
reading sources... [ 57%] metadata/EPSReader
reading sources... [ 57%] metadata/Ecat7Reader
reading sources... [ 57%] metadata/FEIReader
reading sources... [ 58%] metadata/FEITiffReader
reading sources... [ 58%] metadata/FV1000Reader
reading sources... [ 58%] metadata/FakeReader
reading sources... [ 58%] metadata/FilePatternReader
reading sources... [ 59%] metadata/FitsReader
reading sources... [ 59%] metadata/FlexReader
reading sources... [ 59%] metadata/FlowSightReader
reading sources... [ 60%] metadata/FluoviewReader
reading sources... [ 60%] metadata/FujiReader
reading sources... [ 60%] metadata/GIFReader
reading sources... [ 60%] metadata/GatanDM2Reader
reading sources... [ 61%] metadata/GatanReader
reading sources... [ 61%] metadata/GelReader
reading sources... [ 61%] metadata/HISReader
reading sources... [ 62%] metadata/HRDGDFReader
reading sources... [ 62%] metadata/HamamatsuVMSReader
reading sources... [ 62%] metadata/HitachiReader
reading sources... [ 62%] metadata/I2IReader
reading sources... [ 63%] metadata/ICSReader
reading sources... [ 63%] metadata/IM3Reader
reading sources... [ 63%] metadata/IMODReader
reading sources... [ 64%] metadata/INRReader
reading sources... [ 64%] metadata/IPLabReader
reading sources... [ 64%] metadata/IPWReader
reading sources... [ 65%] metadata/ImaconReader
reading sources... [ 65%] metadata/ImageIOReader
reading sources... [ 65%] metadata/ImagicReader
reading sources... [ 65%] metadata/ImarisHDFReader
reading sources... [ 66%] metadata/ImarisReader
reading sources... [ 66%] metadata/ImarisTiffReader
reading sources... [ 66%] metadata/ImprovisionTiffReader
reading sources... [ 67%] metadata/ImspectorReader
reading sources... [ 67%] metadata/InCell3000Reader
reading sources... [ 67%] metadata/InCellReader
reading sources... [ 67%] metadata/InveonReader
reading sources... [ 68%] metadata/IonpathMIBITiffReader
reading sources... [ 68%] metadata/IvisionReader
reading sources... [ 68%] metadata/JEOLReader
reading sources... [ 69%] metadata/JPEG2000Reader
reading sources... [ 69%] metadata/JPEGReader
reading sources... [ 69%] metadata/JPKReader
reading sources... [ 69%] metadata/JPXReader
reading sources... [ 70%] metadata/KLBReader
reading sources... [ 70%] metadata/KhorosReader
reading sources... [ 70%] metadata/KodakReader
reading sources... [ 71%] metadata/L2DReader
reading sources... [ 71%] metadata/LEOReader
reading sources... [ 71%] metadata/LIFReader
reading sources... [ 72%] metadata/LIMReader
reading sources... [ 72%] metadata/LOFReader
reading sources... [ 72%] metadata/LeicaReader
reading sources... [ 72%] metadata/LeicaSCNReader
reading sources... [ 73%] metadata/LiFlimReader
reading sources... [ 73%] metadata/MIASReader
reading sources... [ 73%] metadata/MINCReader
reading sources... [ 74%] metadata/MNGReader
reading sources... [ 74%] metadata/MRCReader
reading sources... [ 74%] metadata/MRWReader
reading sources... [ 74%] metadata/MetamorphReader
reading sources... [ 75%] metadata/MetamorphTiffReader
reading sources... [ 75%] metadata/MetaxpressTiffReader
reading sources... [ 75%] metadata/MicroCTReader
reading sources... [ 76%] metadata/MicromanagerReader
reading sources... [ 76%] metadata/MikroscanTiffReader
reading sources... [ 76%] metadata/MinimalTiffReader
reading sources... [ 76%] metadata/MolecularImagingReader
reading sources... [ 77%] metadata/NAFReader
reading sources... [ 77%] metadata/ND2Reader
reading sources... [ 77%] metadata/NDPIReader
reading sources... [ 78%] metadata/NDPISReader
reading sources... [ 78%] metadata/NRRDReader
reading sources... [ 78%] metadata/NiftiReader
reading sources... [ 78%] metadata/NikonElementsTiffReader
reading sources... [ 79%] metadata/NikonReader
reading sources... [ 79%] metadata/NikonTiffReader
reading sources... [ 79%] metadata/OBFReader
reading sources... [ 80%] metadata/OIRReader
reading sources... [ 80%] metadata/OMETiffReader
reading sources... [ 80%] metadata/OMEXMLReader
reading sources... [ 81%] metadata/OlympusTileReader
reading sources... [ 81%] metadata/OpenlabRawReader
reading sources... [ 81%] metadata/OpenlabReader
reading sources... [ 81%] metadata/OperettaReader
reading sources... [ 82%] metadata/OxfordInstrumentsReader
reading sources... [ 82%] metadata/PCIReader
reading sources... [ 82%] metadata/PCORAWReader
reading sources... [ 83%] metadata/PCXReader
reading sources... [ 83%] metadata/PDSReader
reading sources... [ 83%] metadata/PGMReader
reading sources... [ 83%] metadata/PQBinReader
reading sources... [ 84%] metadata/PSDReader
reading sources... [ 84%] metadata/PerkinElmerReader
reading sources... [ 84%] metadata/PhotoshopTiffReader
reading sources... [ 85%] metadata/PictReader
reading sources... [ 85%] metadata/PovrayReader
reading sources... [ 85%] metadata/PrairieReader
reading sources... [ 85%] metadata/PyramidTiffReader
reading sources... [ 86%] metadata/QTReader
reading sources... [ 86%] metadata/QuesantReader
reading sources... [ 86%] metadata/RCPNLReader
reading sources... [ 87%] metadata/RHKReader
reading sources... [ 87%] metadata/SBIGReader
reading sources... [ 87%] metadata/SDTReader
reading sources... [ 88%] metadata/SEQReader
reading sources... [ 88%] metadata/SIFReader
reading sources... [ 88%] metadata/SISReader
reading sources... [ 88%] metadata/SMCameraReader
reading sources... [ 89%] metadata/SPCReader
reading sources... [ 89%] metadata/SPEReader
reading sources... [ 89%] metadata/SVSReader
reading sources... [ 90%] metadata/ScanrReader
reading sources... [ 90%] metadata/SeikoReader
reading sources... [ 90%] metadata/SimplePCITiffReader
reading sources... [ 90%] metadata/SlideBook7Reader
reading sources... [ 91%] metadata/SlidebookReader
reading sources... [ 91%] metadata/SlidebookTiffReader
reading sources... [ 91%] metadata/SpiderReader
reading sources... [ 92%] metadata/TCSReader
reading sources... [ 92%] metadata/TargaReader
reading sources... [ 92%] metadata/TecanReader
reading sources... [ 92%] metadata/TextReader
reading sources... [ 93%] metadata/TiffDelegateReader
reading sources... [ 93%] metadata/TiffJAIReader
reading sources... [ 93%] metadata/TiffReader
reading sources... [ 94%] metadata/TileJPEGReader
reading sources... [ 94%] metadata/TillVisionReader
reading sources... [ 94%] metadata/TopometrixReader
reading sources... [ 94%] metadata/TrestleReader
reading sources... [ 95%] metadata/UBMReader
reading sources... [ 95%] metadata/UnisokuReader
reading sources... [ 95%] metadata/VGSAMReader
reading sources... [ 96%] metadata/VarianFDFReader
reading sources... [ 96%] metadata/VectraReader
reading sources... [ 96%] metadata/VeecoReader
reading sources... [ 97%] metadata/VentanaReader
reading sources... [ 97%] metadata/VisitechReader
reading sources... [ 97%] metadata/VolocityClippingReader
reading sources... [ 97%] metadata/VolocityReader
reading sources... [ 98%] metadata/WATOPReader
reading sources... [ 98%] metadata/XLEFReader
reading sources... [ 98%] metadata/ZeissCZIReader
reading sources... [ 99%] metadata/ZeissLMSReader
reading sources... [ 99%] metadata/ZeissLSMReader
reading sources... [ 99%] metadata/ZeissTIFFReader
reading sources... [ 99%] metadata/ZeissZVIReader
reading sources... [100%] metadata/ZipReader
reading sources... [100%] supported-formats
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets... done
writing output... [ 0%] about/bug-reporting
writing output... [ 0%] about/index
writing output... [ 1%] about/whats-new
writing output... [ 1%] developers/building-bioformats
writing output... [ 1%] developers/code-formatting
writing output... [ 1%] developers/commit-testing
writing output... [ 2%] developers/components
writing output... [ 2%] developers/conversion
writing output... [ 2%] developers/dotnet-dev
writing output... [ 2%] developers/export
writing output... [ 3%] developers/export2
writing output... [ 3%] developers/file-reader
writing output... [ 3%] developers/file-writer
writing output... [ 3%] developers/format-documentation
writing output... [ 4%] developers/generating-test-images
writing output... [ 4%] developers/in-memory
writing output... [ 4%] developers/index
writing output... [ 4%] developers/java-library
writing output... [ 4%] developers/logging
writing output... [ 5%] developers/matlab-dev
writing output... [ 5%] developers/non-java-code
writing output... [ 5%] developers/overview
writing output... [ 5%] developers/python-dev
writing output... [ 6%] developers/r-dev
writing output... [ 6%] developers/reader-guide
writing output... [ 6%] developers/service
writing output... [ 6%] developers/tiling
writing output... [ 7%] developers/units
writing output... [ 7%] developers/useful-scripts
writing output... [ 7%] developers/wsi
writing output... [ 7%] formats/3i-slidebook
writing output... [ 8%] formats/3i-slidebook-7
writing output... [ 8%] formats/abd-tiff
writing output... [ 8%] formats/aim
writing output... [ 8%] formats/alicona-3d
writing output... [ 9%] formats/amersham-biosciences-gel
writing output... [ 9%] formats/amira-mesh
writing output... [ 9%] formats/amnis-flowsight
writing output... [ 9%] formats/analyze-75
writing output... [ 9%] formats/andor-sif
writing output... [ 10%] formats/animated-png
writing output... [ 10%] formats/aperio-afi
writing output... [ 10%] formats/aperio-svs-tiff
writing output... [ 10%] formats/applied-precision-cellworx
writing output... [ 11%] formats/avi
writing output... [ 11%] formats/axon-raw-format
writing output... [ 11%] formats/bd-pathway
writing output... [ 11%] formats/becker-hickl-fifo
writing output... [ 12%] formats/becker-hickl-spcimage
writing output... [ 12%] formats/big-data-viewer
writing output... [ 12%] formats/bio-rad-gel
writing output... [ 12%] formats/bio-rad-pic
writing output... [ 13%] formats/bio-rad-scn
writing output... [ 13%] formats/bitplane-imaris
writing output... [ 13%] formats/bruker-mri
writing output... [ 13%] formats/burleigh
writing output... [ 13%] formats/canon-dng
writing output... [ 14%] formats/cellh5
writing output... [ 14%] formats/cellomics
writing output... [ 14%] formats/cellsens-vsi
writing output... [ 14%] formats/cellvoyager
writing output... [ 15%] formats/cv7000
writing output... [ 15%] formats/dataset-table
writing output... [ 15%] formats/deltavision
writing output... [ 15%] formats/dicom
writing output... [ 16%] formats/ecat7
writing output... [ 16%] formats/eps
writing output... [ 16%] formats/evotecperkinelmer-opera-flex
writing output... [ 16%] formats/fei
writing output... [ 17%] formats/fei-tiff
writing output... [ 17%] formats/fits
writing output... [ 17%] formats/gatan-digital-micrograph
writing output... [ 17%] formats/gatan-digital-micrograph-2
writing output... [ 17%] formats/ge-microct
writing output... [ 18%] formats/gif
writing output... [ 18%] formats/hamamatsu-aquacosmos-naf
writing output... [ 18%] formats/hamamatsu-his
writing output... [ 18%] formats/hamamatsu-ndpi
writing output... [ 19%] formats/hamamatsu-vms
writing output... [ 19%] formats/hitachi-s-4800
writing output... [ 19%] formats/i2i
writing output... [ 19%] formats/ics
writing output... [ 20%] formats/imacon
writing output... [ 20%] formats/imagepro-sequence
writing output... [ 20%] formats/imagepro-workspace
writing output... [ 20%] formats/imagic
writing output... [ 21%] formats/imod
writing output... [ 21%] formats/improvision-openlab-liff
writing output... [ 21%] formats/improvision-openlab-raw
writing output... [ 21%] formats/improvision-tiff
writing output... [ 22%] formats/imspector-obf
writing output... [ 22%] formats/incell-1000
writing output... [ 22%] formats/incell-3000
writing output... [ 22%] formats/index
writing output... [ 22%] formats/inr
writing output... [ 23%] formats/inveon
writing output... [ 23%] formats/ionpath-mibi
writing output... [ 23%] formats/iplab
writing output... [ 23%] formats/iplab-mac
writing output... [ 24%] formats/jeol
writing output... [ 24%] formats/jpeg
writing output... [ 24%] formats/jpeg-2000
writing output... [ 24%] formats/jpk
writing output... [ 25%] formats/jpx
writing output... [ 25%] formats/keller-lab-block
writing output... [ 25%] formats/khoros-viff-bitmap
writing output... [ 25%] formats/kodak-bip
writing output... [ 26%] formats/lambert-instruments-flim
writing output... [ 26%] formats/lavision-imspector
writing output... [ 26%] formats/leica-lcs-lei
writing output... [ 26%] formats/leica-lif
writing output... [ 26%] formats/leica-lof
writing output... [ 27%] formats/leica-scn
writing output... [ 27%] formats/leica-xlef
writing output... [ 27%] formats/leo
writing output... [ 27%] formats/li-cor-l2d
writing output... [ 28%] formats/lim
writing output... [ 28%] formats/metamorph-75-tiff
writing output... [ 28%] formats/metamorph-stack-stk
writing output... [ 28%] formats/metaxpress
writing output... [ 29%] formats/mias-maia-scientific
writing output... [ 29%] formats/micro-manager
writing output... [ 29%] formats/mikroscan-tiff
writing output... [ 29%] formats/minc-mri
writing output... [ 30%] formats/minolta-mrw
writing output... [ 30%] formats/mng
writing output... [ 30%] formats/molecular-imaging
writing output... [ 30%] formats/mrc
writing output... [ 30%] formats/nef
writing output... [ 31%] formats/nifti
writing output... [ 31%] formats/nikon-elements-tiff
writing output... [ 31%] formats/nikon-ez-c1-tiff
writing output... [ 31%] formats/nikon-nis-elements-nd2
writing output... [ 32%] formats/nrrd
writing output... [ 32%] formats/olympus-cellrapl
writing output... [ 32%] formats/olympus-fluoview-fv1000
writing output... [ 32%] formats/olympus-fluoview-tiff
writing output... [ 33%] formats/olympus-oir
writing output... [ 33%] formats/olympus-omp2info
writing output... [ 33%] formats/olympus-scanr
writing output... [ 33%] formats/olympus-sis-tiff
writing output... [ 34%] formats/ome-tiff
writing output... [ 34%] formats/ome-xml
writing output... [ 34%] formats/omero-pyramid
writing output... [ 34%] formats/options
writing output... [ 35%] formats/oxford-instruments
writing output... [ 35%] formats/pattern-file
writing output... [ 35%] formats/pcoraw
writing output... [ 35%] formats/pcx-pc-paintbrush
writing output... [ 35%] formats/perkin-elmer-densitometer
writing output... [ 36%] formats/perkinelmer-columbus
writing output... [ 36%] formats/perkinelmer-nuance
writing output... [ 36%] formats/perkinelmer-operetta
writing output... [ 36%] formats/perkinelmer-ultraview
writing output... [ 37%] formats/pgm
writing output... [ 37%] formats/photoshop-psd
writing output... [ 37%] formats/photoshop-tiff
writing output... [ 37%] formats/picoquant-bin
writing output... [ 38%] formats/pict-macintosh-picture
writing output... [ 38%] formats/png
writing output... [ 38%] formats/prairie-tech-tiff
writing output... [ 38%] formats/princeton-instruments-spe
writing output... [ 39%] formats/quesant
writing output... [ 39%] formats/quicktime-movie
writing output... [ 39%] formats/rhk
writing output... [ 39%] formats/sbig
writing output... [ 39%] formats/seiko
writing output... [ 40%] formats/simplepci-hcimage
writing output... [ 40%] formats/simplepci-hcimage-tiff
writing output... [ 40%] formats/sm-camera
writing output... [ 40%] formats/spider
writing output... [ 41%] formats/targa
writing output... [ 41%] formats/tecan-spark-cyto-workspace
writing output... [ 41%] formats/text
writing output... [ 41%] formats/tiff
writing output... [ 42%] formats/tillphotonics-tillvision
writing output... [ 42%] formats/topometrix
writing output... [ 42%] formats/trestle
writing output... [ 42%] formats/ubm
writing output... [ 43%] formats/unisoku
writing output... [ 43%] formats/varian-fdf
writing output... [ 43%] formats/vectra-qptiff
writing output... [ 43%] formats/veeco-afm
writing output... [ 43%] formats/ventana-bif
writing output... [ 44%] formats/vg-sam
writing output... [ 44%] formats/visitech-xys
writing output... [ 44%] formats/volocity
writing output... [ 44%] formats/volocity-library-clipping
writing output... [ 45%] formats/wa-top
writing output... [ 45%] formats/windows-bitmap
writing output... [ 45%] formats/zeiss-axio-csm
writing output... [ 45%] formats/zeiss-axiovision-tiff
writing output... [ 46%] formats/zeiss-axiovision-zvi
writing output... [ 46%] formats/zeiss-czi
writing output... [ 46%] formats/zeiss-lsm
writing output... [ 46%] index
writing output... [ 47%] metadata-summary
writing output... [ 47%] metadata/AFIReader
writing output... [ 47%] metadata/AIMReader
writing output... [ 47%] metadata/APLReader
writing output... [ 48%] metadata/APNGReader
writing output... [ 48%] metadata/ARFReader
writing output... [ 48%] metadata/AVIReader
writing output... [ 48%] metadata/AliconaReader
writing output... [ 48%] metadata/AmiraReader
writing output... [ 49%] metadata/AnalyzeReader
writing output... [ 49%] metadata/BDReader
writing output... [ 49%] metadata/BDVReader
writing output... [ 49%] metadata/BIFormatReader
writing output... [ 50%] metadata/BMPReader
writing output... [ 50%] metadata/BaseTiffReader
writing output... [ 50%] metadata/BaseZeissReader
writing output... [ 50%] metadata/BioRadGelReader
writing output... [ 51%] metadata/BioRadReader
writing output... [ 51%] metadata/BioRadSCNReader
writing output... [ 51%] metadata/BrukerReader
writing output... [ 51%] metadata/BurleighReader
writing output... [ 52%] metadata/CV7000Reader
writing output... [ 52%] metadata/CanonRawReader
writing output... [ 52%] metadata/CellH5Reader
writing output... [ 52%] metadata/CellSensReader
writing output... [ 52%] metadata/CellVoyagerReader
writing output... [ 53%] metadata/CellWorxReader
writing output... [ 53%] metadata/CellomicsReader
writing output... [ 53%] metadata/ColumbusReader
writing output... [ 53%] metadata/DNGReader
writing output... [ 54%] metadata/DeltavisionReader
writing output... [ 54%] metadata/DicomReader
writing output... [ 54%] metadata/EPSReader
writing output... [ 54%] metadata/Ecat7Reader
writing output... [ 55%] metadata/FEIReader
writing output... [ 55%] metadata/FEITiffReader
writing output... [ 55%] metadata/FV1000Reader
writing output... [ 55%] metadata/FakeReader
writing output... [ 56%] metadata/FilePatternReader
writing output... [ 56%] metadata/FitsReader
writing output... [ 56%] metadata/FlexReader
writing output... [ 56%] metadata/FlowSightReader
writing output... [ 57%] metadata/FluoviewReader
writing output... [ 57%] metadata/FujiReader
writing output... [ 57%] metadata/GIFReader
writing output... [ 57%] metadata/GatanDM2Reader
writing output... [ 57%] metadata/GatanReader
writing output... [ 58%] metadata/GelReader
writing output... [ 58%] metadata/HISReader
writing output... [ 58%] metadata/HRDGDFReader
writing output... [ 58%] metadata/HamamatsuVMSReader
writing output... [ 59%] metadata/HitachiReader
writing output... [ 59%] metadata/I2IReader
writing output... [ 59%] metadata/ICSReader
writing output... [ 59%] metadata/IM3Reader
writing output... [ 60%] metadata/IMODReader
writing output... [ 60%] metadata/INRReader
writing output... [ 60%] metadata/IPLabReader
writing output... [ 60%] metadata/IPWReader
writing output... [ 61%] metadata/ImaconReader
writing output... [ 61%] metadata/ImageIOReader
writing output... [ 61%] metadata/ImagicReader
writing output... [ 61%] metadata/ImarisHDFReader
writing output... [ 61%] metadata/ImarisReader
writing output... [ 62%] metadata/ImarisTiffReader
writing output... [ 62%] metadata/ImprovisionTiffReader
writing output... [ 62%] metadata/ImspectorReader
writing output... [ 62%] metadata/InCell3000Reader
writing output... [ 63%] metadata/InCellReader
writing output... [ 63%] metadata/InveonReader
writing output... [ 63%] metadata/IonpathMIBITiffReader
writing output... [ 63%] metadata/IvisionReader
writing output... [ 64%] metadata/JEOLReader
writing output... [ 64%] metadata/JPEG2000Reader
writing output... [ 64%] metadata/JPEGReader
writing output... [ 64%] metadata/JPKReader
writing output... [ 65%] metadata/JPXReader
writing output... [ 65%] metadata/KLBReader
writing output... [ 65%] metadata/KhorosReader
writing output... [ 65%] metadata/KodakReader
writing output... [ 65%] metadata/L2DReader
writing output... [ 66%] metadata/LEOReader
writing output... [ 66%] metadata/LIFReader
writing output... [ 66%] metadata/LIMReader
writing output... [ 66%] metadata/LOFReader
writing output... [ 67%] metadata/LeicaReader
writing output... [ 67%] metadata/LeicaSCNReader
writing output... [ 67%] metadata/LiFlimReader
writing output... [ 67%] metadata/MIASReader
writing output... [ 68%] metadata/MINCReader
writing output... [ 68%] metadata/MNGReader
writing output... [ 68%] metadata/MRCReader
writing output... [ 68%] metadata/MRWReader
writing output... [ 69%] metadata/MetamorphReader
writing output... [ 69%] metadata/MetamorphTiffReader
writing output... [ 69%] metadata/MetaxpressTiffReader
writing output... [ 69%] metadata/MicroCTReader
writing output... [ 70%] metadata/MicromanagerReader
writing output... [ 70%] metadata/MikroscanTiffReader
writing output... [ 70%] metadata/MinimalTiffReader
writing output... [ 70%] metadata/MolecularImagingReader
writing output... [ 70%] metadata/NAFReader
writing output... [ 71%] metadata/ND2Reader
writing output... [ 71%] metadata/NDPIReader
writing output... [ 71%] metadata/NDPISReader
writing output... [ 71%] metadata/NRRDReader
writing output... [ 72%] metadata/NiftiReader
writing output... [ 72%] metadata/NikonElementsTiffReader
writing output... [ 72%] metadata/NikonReader
writing output... [ 72%] metadata/NikonTiffReader
writing output... [ 73%] metadata/OBFReader
writing output... [ 73%] metadata/OIRReader
writing output... [ 73%] metadata/OMETiffReader
writing output... [ 73%] metadata/OMEXMLReader
writing output... [ 74%] metadata/OlympusTileReader
writing output... [ 74%] metadata/OpenlabRawReader
writing output... [ 74%] metadata/OpenlabReader
writing output... [ 74%] metadata/OperettaReader
writing output... [ 74%] metadata/OxfordInstrumentsReader
writing output... [ 75%] metadata/PCIReader
writing output... [ 75%] metadata/PCORAWReader
writing output... [ 75%] metadata/PCXReader
writing output... [ 75%] metadata/PDSReader
writing output... [ 76%] metadata/PGMReader
writing output... [ 76%] metadata/PQBinReader
writing output... [ 76%] metadata/PSDReader
writing output... [ 76%] metadata/PerkinElmerReader
writing output... [ 77%] metadata/PhotoshopTiffReader
writing output... [ 77%] metadata/PictReader
writing output... [ 77%] metadata/PovrayReader
writing output... [ 77%] metadata/PrairieReader
writing output... [ 78%] metadata/PyramidTiffReader
writing output... [ 78%] metadata/QTReader
writing output... [ 78%] metadata/QuesantReader
writing output... [ 78%] metadata/RCPNLReader
writing output... [ 78%] metadata/RHKReader
writing output... [ 79%] metadata/SBIGReader
writing output... [ 79%] metadata/SDTReader
writing output... [ 79%] metadata/SEQReader
writing output... [ 79%] metadata/SIFReader
writing output... [ 80%] metadata/SISReader
writing output... [ 80%] metadata/SMCameraReader
writing output... [ 80%] metadata/SPCReader
writing output... [ 80%] metadata/SPEReader
writing output... [ 81%] metadata/SVSReader
writing output... [ 81%] metadata/ScanrReader
writing output... [ 81%] metadata/SeikoReader
writing output... [ 81%] metadata/SimplePCITiffReader
writing output... [ 82%] metadata/SlideBook7Reader
writing output... [ 82%] metadata/SlidebookReader
writing output... [ 82%] metadata/SlidebookTiffReader
writing output... [ 82%] metadata/SpiderReader
writing output... [ 83%] metadata/TCSReader
writing output... [ 83%] metadata/TargaReader
writing output... [ 83%] metadata/TecanReader
writing output... [ 83%] metadata/TextReader
writing output... [ 83%] metadata/TiffDelegateReader
writing output... [ 84%] metadata/TiffJAIReader
writing output... [ 84%] metadata/TiffReader
writing output... [ 84%] metadata/TileJPEGReader
writing output... [ 84%] metadata/TillVisionReader
writing output... [ 85%] metadata/TopometrixReader
writing output... [ 85%] metadata/TrestleReader
writing output... [ 85%] metadata/UBMReader
writing output... [ 85%] metadata/UnisokuReader
writing output... [ 86%] metadata/VGSAMReader
writing output... [ 86%] metadata/VarianFDFReader
writing output... [ 86%] metadata/VectraReader
writing output... [ 86%] metadata/VeecoReader
writing output... [ 87%] metadata/VentanaReader
writing output... [ 87%] metadata/VisitechReader
writing output... [ 87%] metadata/VolocityClippingReader
writing output... [ 87%] metadata/VolocityReader
writing output... [ 87%] metadata/WATOPReader
writing output... [ 88%] metadata/XLEFReader
writing output... [ 88%] metadata/ZeissCZIReader
writing output... [ 88%] metadata/ZeissLMSReader
writing output... [ 88%] metadata/ZeissLSMReader
writing output... [ 89%] metadata/ZeissTIFFReader
writing output... [ 89%] metadata/ZeissZVIReader
writing output... [ 89%] metadata/ZipReader
writing output... [ 89%] supported-formats
writing output... [ 90%] users/bisque/index
writing output... [ 90%] users/cellprofiler/index
writing output... [ 90%] users/comlinetools/conversion
writing output... [ 90%] users/comlinetools/display
writing output... [ 91%] users/comlinetools/domainlist
writing output... [ 91%] users/comlinetools/edit
writing output... [ 91%] users/comlinetools/formatlist
writing output... [ 91%] users/comlinetools/ijview
writing output... [ 91%] users/comlinetools/index
writing output... [ 92%] users/comlinetools/mkfake
writing output... [ 92%] users/comlinetools/xml-validation
writing output... [ 92%] users/comlinetools/xmlindent
writing output... [ 92%] users/comstat2/index
writing output... [ 93%] users/endrov/index
writing output... [ 93%] users/farsight/index
writing output... [ 93%] users/fiji/index
writing output... [ 93%] users/focalpoint/index
writing output... [ 94%] users/graphic-con/index
writing output... [ 94%] users/i3dcore/index
writing output... [ 94%] users/icy/index
writing output... [ 94%] users/idl/index
writing output... [ 95%] users/imagej/features
writing output... [ 95%] users/imagej/index
writing output... [ 95%] users/imagej/installing
writing output... [ 95%] users/imagej/load-images
writing output... [ 96%] users/imagej/managing-memory
writing output... [ 96%] users/imagej/options
writing output... [ 96%] users/imaris/index
writing output... [ 96%] users/imglib/index
writing output... [ 96%] users/index
writing output... [ 97%] users/iqm/index
writing output... [ 97%] users/itk/index
writing output... [ 97%] users/knime/index
writing output... [ 97%] users/matlab/index
writing output... [ 98%] users/micromanager/index
writing output... [ 98%] users/mipav/index
writing output... [ 98%] users/octave/index
writing output... [ 98%] users/ome-server/index
writing output... [ 99%] users/qu-matlab/index
writing output... [ 99%] users/qupath/index
writing output... [ 99%] users/r/index
writing output... [ 99%] users/vaa3d/index
writing output... [100%] users/visad/index
writing output... [100%] users/visbio/index
writing output... [100%] users/xuvtools/index
( about/index: line 124) -ignored- https://github.com/ome/design/issues/55
( about/whats-new: line 1906) -ignored- https://github.com/ome/bio-formats-documentation
( about/whats-new: line 2030) -ignored- https://github.com/ome/bioformats/blob/develop/SUPPORT.md
( about/whats-new: line 2181) -ignored- https://github.com/ome/ome-codecs
( about/whats-new: line 2184) -ignored- https://github.com/ome/ome-jai
( about/whats-new: line 2435) -ignored- https://github.com/ome/ome-model
( about/whats-new: line 2585) -ignored- https://github.com/ome/ome-common-java
( about/whats-new: line 2589) -ignored- https://github.com/ome/ome-poi
( about/whats-new: line 2596) -ignored- https://github.com/ome/ome-mdbtools
( about/whats-new: line 2600) -ignored- https://github.com/ome/ome-stubs
( about/whats-new: line 2604) -ignored- https://github.com/ome/ome-metakit
( about/whats-new: line 2823) -ignored- https://github.com/ome/design/issues/42
( about/whats-new: line 2836) -ignored- https://github.com/ome/bio-formats-jace
(developers/building-bioformats: line 21) -ignored- https://github.com/ome/bioformats
(developers/building-bioformats: line 44) -ignored- https://github.com/ome/bioformats/tree/develop/components/
(developers/building-bioformats: line 44) -ignored- https://github.com/ome/bioformats/tree/develop/components/forks/
(developers/commit-testing: line 7) -ignored- https://github.com/ome/bioformats/blob/develop/components/test-suite
(developers/commit-testing: line 133) -ignored- https://github.com/ome/bioformats/tree/develop/components/formats-gpl/test/matlab
(developers/components: line 42) -ignored- https://github.com/ome/bioformats/tree/develop/components/bio-formats-plugins
(developers/components: line 53) -ignored- https://github.com/ome/bioformats/tree/develop/components/bio-formats-tools
(developers/components: line 65) -ignored- https://github.com/ome/bioformats/tree/develop/components/bundles
(developers/components: line 92) -ignored- https://github.com/ome/bioformats/tree/develop/components/forks/turbojpeg
(developers/components: line 105) -ignored- https://github.com/ome/bioformats/tree/develop/components/formats-api
(developers/components: line 119) -ignored- https://github.com/ome/bioformats/tree/develop/components/formats-bsd
(developers/components: line 128) -ignored- https://github.com/ome/bioformats/tree/develop/components/formats-gpl
(developers/components: line 141) -ignored- https://github.com/ome/bioformats/tree/develop/components/test-suite
(developers/components: line 172) -ignored- https://github.com/ome/bio-formats-examples
(developers/components: line 184) -ignored- https://github.com/ome/ome-files-cpp
(developers/components: line 229) -ignored- https://github.com/ome/ome-metakit/tree/master
(developers/components: line 239) -ignored- https://github.com/ome/ome-model/tree/master/ome-xml
(developers/components: line 250) -ignored- https://github.com/ome/ome-model/tree/master/specification
(developers/components: line 259) -ignored- https://github.com/ome/ome-stubs/tree/master
(developers/file-reader: line 104) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-api/src/loci/formats/IFormatReader.java
(developers/file-writer: line 32) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-api/src/loci/formats/IFormatWriter.java
(developers/file-writer: line 35) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-tools/src/loci/formats/tools/ImageConverter.java
(developers/format-documentation: line 13) -ignored- https://github.com/ome/bio-formats-documentation/blob/master/src/main/resources/format-pages.txt
(developers/generating-test-images: line 328) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/FakeReader.java
(developers/index: line 15) -ignored- https://github.com/ome/bioformats/tree/develop/components/formats-gpl/utils
(developers/index: line 15) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/
(developers/java-library: line 18) -ignored- https://github.com/ome/openmicroscopy
(developers/java-library: line 24) -ignored- https://github.com/ome/bio-formats-examples/blob/master/pom.xml
(developers/java-library: line 24) -ignored- https://github.com/ome/bio-formats-examples/blob/master/build.gradle
(developers/java-library: line 32) -ignored- http://www.slf4j.org/
(developers/java-library: line 62) -ignored- https://www.adobe.com/devnet/xmp.html
(developers/java-library: line 262) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/MultiFileExample.java
(developers/java-library: line 265) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/ParallelRead.java
(developers/java-library: line 271) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/OrthogonalReader.java
(developers/java-library: line 277) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/MinimumWriter.java
(developers/java-library: line 281) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/FileExport.java
(developers/java-library: line 284) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/TiledExportExample.java
(developers/java-library: line 287) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/FileExportSPW.java
(developers/java-library: line 293) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/MakeLZW.java
(developers/java-library: line 299) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/GetPhysicalMetadata.java
(developers/java-library: line 302) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/ReadPhysicalSize.java
(developers/java-library: line 305) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-tools/src/loci/formats/tools/ImageInfo.java
(developers/java-library: line 310) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/PrintTimestamps.java
(developers/java-library: line 313) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/PrintLensNA.java
(developers/java-library: line 316) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/PrintROIs.java
(developers/java-library: line 319) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/SubResolutionExample.java
(developers/java-library: line 325) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/EditImageName.java
(developers/java-library: line 328) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/EditTiffComment.java
(developers/java-library: line 331) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/writeMapAnnotationsExample.java
(developers/java-library: line 334) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/CommentSurgery.java
(developers/java-library: line 343) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/FileConvert.java
(developers/java-library: line 346) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/ConvertToOmeTiff.java
(developers/java-library: line 349) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/WritePrecompressedPlanes.java
(developers/java-library: line 353) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/GeneratePyramidResolutions.java
(developers/java-library: line 356) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/TiledReaderWriter.java
(developers/java-library: line 359) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/OverlappedTiledWriter.java
(developers/java-library: line 362) -ignored- https://github.com/ome/bio-formats-examples/blob/master/src/main/java/SimpleTiledWriter.java
(developers/java-library: line 368) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/Simple_Read.java
(developers/java-library: line 372) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/Read_Image.java
(developers/java-library: line 376) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/Mass_Importer.java
(developers/java-library: line 384) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/SewTiffs.java
(developers/java-library: line 387) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/utils/SumPlanes.java
(developers/logging: line 14) -ignored- http://logback.qos.ch/
(developers/logging: line 38) -ignored- http://logback.qos.ch/manual/configuration.html
(developers/matlab-dev: line 85) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/matlab/bfopen.m
(developers/matlab-dev: line 233) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/matlab/bfGetReader.m
(developers/matlab-dev: line 248) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/matlab/bfGetPlane.m
(developers/matlab-dev: line 271) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/matlab/bfsave.m
(developers/matlab-dev: line 290) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/matlab/createMinimalOMEXMLMetadata.m
(developers/overview: line 62) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-api/src/loci/formats/readers.txt
(developers/reader-guide: line 38) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PerkinElmerReader.java
(developers/reader-guide: line 303) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImarisReader.java
(developers/reader-guide: line 303) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LIFReader.java
(developers/reader-guide: line 303) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/InCellReader.java
(formats/3i-slidebook: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SlidebookReader.java
(formats/3i-slidebook-7: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java
(formats/abd-tiff: line 11) -ignored- https://andor.oxinst.com/
(formats/abd-tiff: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/FluoviewReader.java
( formats/aim: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/AIMReader.java
(formats/alicona-3d: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/AliconaReader.java
(formats/amersham-biosciences-gel: line 11) -ignored- https://www.cytivalifesciences.com/en/us/shop/protein-analysis/molecular-imaging-for-proteins/imaging-systems
(formats/amersham-biosciences-gel: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/GelReader.java
(formats/amira-mesh: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/AmiraReader.java
(formats/amnis-flowsight: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/FlowSightReader.java
(formats/analyze-75: line 9) -ignored- https://www.mayo.edu/research/core-resources/biomedical-imaging-resource-core/overview
(formats/analyze-75: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/AnalyzeReader.java
(formats/andor-sif: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SIFReader.java
(formats/animated-png: line 9) -ignored- https://animatedpngs.com/
(formats/animated-png: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/APNGReader.java
(formats/animated-png: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/APNGWriter.java
(formats/aperio-afi: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/AFIReader.java
(formats/aperio-svs-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SVSReader.java
(formats/applied-precision-cellworx: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/CellWorxReader.java
( formats/avi: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/AVIReader.java
( formats/avi: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/AVIWriter.java
(formats/axon-raw-format: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ARFReader.java
(formats/bd-pathway: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BDReader.java
(formats/becker-hickl-fifo: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SPCReader.java
(formats/becker-hickl-spcimage: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SDTReader.java
(formats/big-data-viewer: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/BDVReader.java
(formats/bio-rad-gel: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BioRadGelReader.java
(formats/bio-rad-pic: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BioRadReader.java
(formats/bio-rad-pic: line 59) -ignored- http://www.bitplane.com/
(formats/bio-rad-scn: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BioRadSCNReader.java
(formats/bitplane-imaris: line 10) -ignored- https://imaris.oxinst.com/
(formats/bitplane-imaris: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java
(formats/bitplane-imaris: line 24) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImarisTiffReader.java
(formats/bitplane-imaris: line 36) -ignored- https://imaris.oxinst.com/support/imaris-file-format
(formats/bruker-mri: line 19) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BrukerReader.java
(formats/burleigh: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/BurleighReader.java
(formats/canon-dng: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/DNGReader.java
( formats/cellh5: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/CellH5Reader.java
( formats/cellh5: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/CellH5Writer.java
(formats/cellomics: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/CellomicsReader.java
(formats/cellsens-vsi: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/CellSensReader.java
(formats/cellvoyager: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/CellVoyagerReader.java
( formats/cv7000: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/CV7000Reader.java
(formats/deltavision: line 10) -ignored- https://www.cytivalifesciences.com/en/us/solutions/cellular-analysis/products-and-technology/microscopy
(formats/deltavision: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/DeltavisionReader.java
(formats/deltavision: line 24) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/RCPNLReader.java
( formats/dicom: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/DicomReader.java
( formats/dicom: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/DicomWriter.java
( formats/ecat7: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/Ecat7Reader.java
( formats/eps: line 9) -ignored- https://www.adobe.com/
( formats/eps: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/EPSReader.java
( formats/eps: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/EPSWriter.java
(formats/evotecperkinelmer-opera-flex: line 9) -ignored- https://www.perkinelmer.com/
(formats/evotecperkinelmer-opera-flex: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/FlexReader.java
( formats/fei: line 9) -ignored- https://www.fei.com/home/
( formats/fei: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/FEIReader.java
(formats/fei-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/FEITiffReader.java
( formats/fits: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/FitsReader.java
(formats/gatan-digital-micrograph: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/GatanReader.java
(formats/gatan-digital-micrograph-2: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/GatanDM2Reader.java
(formats/ge-microct: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MicroCTReader.java
( formats/gif: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/GIFReader.java
(formats/hamamatsu-aquacosmos-naf: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NAFReader.java
(formats/hamamatsu-his: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/HISReader.java
(formats/hamamatsu-ndpi: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NDPIReader.java
(formats/hamamatsu-ndpi: line 24) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NDPISReader.java
(formats/hamamatsu-vms: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/HamamatsuVMSReader.java
(formats/hitachi-s-4800: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/HitachiReader.java
( formats/i2i: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/I2IReader.java
( formats/ics: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/ICSReader.java
( formats/ics: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/ICSWriter.java
( formats/ics: line 28) -ignored- https://valelab4.ucsf.edu/~nstuurman/IJplugins/Ics_Opener.html
( formats/imacon: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImaconReader.java
(formats/imagepro-sequence: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SEQReader.java
(formats/imagepro-workspace: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/IPWReader.java
( formats/imagic: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImagicReader.java
( formats/imod: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/IMODReader.java
(formats/improvision-openlab-liff: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/OpenlabReader.java
(formats/improvision-openlab-raw: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/OpenlabRawReader.java
(formats/improvision-tiff: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImprovisionTiffReader.java
(formats/imspector-obf: line 9) -ignored- https://imspector.mpibpc.mpg.de
(formats/imspector-obf: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/OBFReader.java
(formats/incell-1000: line 11) -ignored- https://www.cytivalifesciences.com/en/us/solutions/cellular-analysis/products-and-technology/high-content-analysis
(formats/incell-3000: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/InCell3000Reader.java
( formats/inr: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/INRReader.java
( formats/inveon: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/InveonReader.java
(formats/ionpath-mibi: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/IonpathMIBITiffReader.java
( formats/iplab: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/IPLabReader.java
(formats/iplab-mac: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/IvisionReader.java
( formats/jeol: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/JEOLReader.java
( formats/jpeg: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/JPEGReader.java
( formats/jpeg: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/JPEGWriter.java
(formats/jpeg-2000: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/JPEG2000Reader.java
(formats/jpeg-2000: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/JPEG2000Writer.java
( formats/jpk: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/JPKReader.java
( formats/jpx: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/JPXReader.java
(formats/keller-lab-block: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/KLBReader.java
(formats/khoros-viff-bitmap: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/KhorosReader.java
(formats/kodak-bip: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/KodakReader.java
(formats/lambert-instruments-flim: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LiFlimReader.java
(formats/lavision-imspector: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ImspectorReader.java
(formats/leica-lcs-lei: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LeicaReader.java
(formats/leica-lif: line 68) -ignored- https://www.fei.com/software/amira-avizo/
(formats/leica-lof: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LOFReader.java
(formats/leica-scn: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LeicaSCNReader.java
(formats/leica-xlef: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/XLEFReader.java
( formats/leo: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LEOReader.java
(formats/li-cor-l2d: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/L2DReader.java
( formats/lim: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/LIMReader.java
( formats/lim: line 55) -ignored- https://www.nis-elements.com/
(formats/metamorph-75-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MetamorphTiffReader.java
(formats/metamorph-stack-stk: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MetamorphReader.java
(formats/mias-maia-scientific: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MIASReader.java
(formats/micro-manager: line 9) -ignored- https://valelab.ucsf.edu/
(formats/micro-manager: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/MicromanagerReader.java
(formats/mikroscan-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MikroscanTiffReader.java
(formats/minc-mri: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MINCReader.java
(formats/minolta-mrw: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MRWReader.java
( formats/mng: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/MNGReader.java
(formats/molecular-imaging: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MolecularImagingReader.java
( formats/mrc: line 24) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/MRCReader.java
( formats/mrc: line 61) -ignored- https://bio3d.colorado.edu/imod/doc/mrc_format.txt
( formats/nef: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NikonReader.java
( formats/nifti: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NiftiReader.java
(formats/nikon-elements-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NikonElementsTiffReader.java
(formats/nikon-ez-c1-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/NikonTiffReader.java
(formats/nikon-nis-elements-nd2: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ND2Reader.java
( formats/nrrd: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/NRRDReader.java
(formats/olympus-cellrapl: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/APLReader.java
(formats/olympus-fluoview-fv1000: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/FV1000Reader.java
(formats/olympus-oir: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/OIRReader.java
(formats/olympus-omp2info: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java
(formats/olympus-scanr: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ScanrReader.java
(formats/olympus-sis-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SISReader.java
(formats/ome-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/OMETiffReader.java
(formats/ome-tiff: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/OMETiffWriter.java
( formats/ome-xml: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/OMEXMLReader.java
( formats/ome-xml: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/OMEXMLWriter.java
(formats/omero-pyramid: line 19) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/TiffReader.java
(formats/oxford-instruments: line 10) -ignored- https://www.oxinst.com/
(formats/oxford-instruments: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/OxfordInstrumentsReader.java
( formats/pcoraw: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PCORAWReader.java
(formats/pcx-pc-paintbrush: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/PCXReader.java
(formats/perkin-elmer-densitometer: line 9) -ignored- https://www.perkinelmer.com
(formats/perkin-elmer-densitometer: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PDSReader.java
(formats/perkinelmer-columbus: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ColumbusReader.java
(formats/perkinelmer-nuance: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/IM3Reader.java
(formats/perkinelmer-operetta: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/OperettaReader.java
(formats/perkinelmer-ultraview: line 57) -ignored- https://www.perkinelmer.com/lab-solutions/resources/PDFs/LST/Brochures/BRO_UltraVIEW-VoX-Product-Brochure.pdf
( formats/pgm: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/PGMReader.java
(formats/photoshop-psd: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PSDReader.java
(formats/photoshop-tiff: line 9) -ignored- https://www.adobe.com
(formats/photoshop-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PhotoshopTiffReader.java
(formats/picoquant-bin: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PQBinReader.java
(formats/pict-macintosh-picture: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/PictReader.java
(formats/prairie-tech-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PrairieReader.java
(formats/princeton-instruments-spe: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SPEReader.java
( formats/quesant: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/QuesantReader.java
(formats/quicktime-movie: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/QTReader.java
(formats/quicktime-movie: line 23) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/QTWriter.java
( formats/rhk: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/RHKReader.java
( formats/sbig: line 19) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SBIGReader.java
( formats/seiko: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SeikoReader.java
(formats/simplepci-hcimage: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/PCIReader.java
(formats/simplepci-hcimage-tiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SimplePCITiffReader.java
(formats/sm-camera: line 18) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SMCameraReader.java
( formats/spider: line 9) -ignored- https://spider.wadsworth.org/spider_doc/spider/docs/spider.html
( formats/spider: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/SpiderReader.java
( formats/spider: line 32) -ignored- https://spider.wadsworth.org/spider_doc/spider/docs/image_doc.html
( formats/targa: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/TargaReader.java
(formats/tecan-spark-cyto-workspace: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/TecanReader.java
( formats/text: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/TextReader.java
( formats/tiff: line 24) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/out/TiffWriter.java
(formats/tillphotonics-tillvision: line 9) -ignored- https://www.fei.com/service-support/Light-Microscopy/
(formats/tillphotonics-tillvision: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/TillVisionReader.java
(formats/topometrix: line 10) -ignored- http://www.veeco.com/
(formats/topometrix: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/TopometrixReader.java
( formats/trestle: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/TrestleReader.java
( formats/ubm: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/UBMReader.java
( formats/unisoku: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/UnisokuReader.java
(formats/varian-fdf: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VarianFDFReader.java
(formats/vectra-qptiff: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VectraReader.java
(formats/veeco-afm: line 9) -ignored- http://www.veeco.com
(formats/veeco-afm: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VeecoReader.java
(formats/ventana-bif: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VentanaReader.java
( formats/vg-sam: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VGSAMReader.java
(formats/visitech-xys: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VisitechReader.java
(formats/volocity: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VolocityReader.java
(formats/volocity: line 27) -ignored- http://cellularimaging.perkinelmer.com/downloads/
(formats/volocity-library-clipping: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/VolocityClippingReader.java
( formats/wa-top: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/WATOPReader.java
(formats/windows-bitmap: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/src/loci/formats/in/BMPReader.java
(formats/zeiss-axio-csm: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ZeissLMSReader.java
(formats/zeiss-axiovision-tiff: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ZeissTIFFReader.java
(formats/zeiss-axiovision-zvi: line 22) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ZeissZVIReader.java
(formats/zeiss-czi: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ZeissCZIReader.java
(formats/zeiss-lsm: line 21) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-gpl/src/loci/formats/in/ZeissLSMReader.java
(users/imagej/index: line 64) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/basicMetadata.txt
(users/imagej/index: line 69) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/planeTimings.txt
(users/imagej/index: line 74) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/recursiveTiffConvert.txt
(users/imagej/index: line 78) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/bfOpenAsHyperstack.txt
(users/imagej/index: line 84) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/zvi2HyperStack.txt
(users/imagej/index: line 90) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/dvSplitTimePoints.txt
(users/imagej/index: line 94) -ignored- https://github.com/ome/bioformats/blob/develop/components/bio-formats-plugins/utils/macros/batchTiffConvert.txt
(users/imaris/index: line 12) -ignored- https://imaris.oxinst.com/packages/
(users/knime/index: line 4) -ignored- https://www.knime.com/community/image-processing
(users/matlab/index: line 8) -ignored- https://github.com/ome/bioformats/tree/develop/components/formats-gpl/matlab
(users/mipav/index: line 20) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/utils/mipav/PlugInBioFormatsImporter.java
(users/mipav/index: line 38) -ignored- https://github.com/ome/bioformats/blob/develop/components/formats-bsd/utils/mipav/readme.txt
(users/ome-server/index: line 115) -ignored- https://github.com/ome/bioformats/tree/v4.4.10/components/scifio/src/loci/formats/ome/OmeisImporter.java
(users/xuvtools/index: line 4) -ignored- http://www.xuvtools.org
(about/bug-reporting: line 13) redirect https://downloads.openmicroscopy.org/latest/bio-formats/ - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/
(about/bug-reporting: line 35) ok https://en.wikipedia.org/wiki/Resource_fork
( about/index: line 65) ok https://github.com/fiji/fiji/issues
( about/whats-new: line 3393) redirect http://artifacts.openmicroscopy.org - permanently to https://artifacts.openmicroscopy.org/
(developers/java-library: line 7) redirect http://artifacts.openmicroscopy.org/artifactory - with Found to https://artifacts.openmicroscopy.org/artifactory/webapp/home.html?0
( formats/fits: line 50) redirect http://archive.stsci.edu/fits/ - permanently to https://archive.stsci.edu/fits/
( formats/fits: line 28) redirect http://archive.stsci.edu/fits/fits_standard/ - permanently to https://archive.stsci.edu/fits/fits_standard/
( about/index: line 9) redirect https://doi.org/10.1186/gb-2005-6-5-r47 - permanently to https://genomebiology.biomedcentral.com/articles/10.1186/gb-2005-6-5-r47
( formats/imod: line 9) ok http://bio3d.colorado.edu
( formats/imod: line 27) ok http://bio3d.colorado.edu/imod/
( formats/mrc: line 30) ok http://bio3d.colorado.edu/imod/files/imod_data.tar.gz
( formats/imod: line 33) ok http://bio3d.colorado.edu/imod/doc/binspec.html
( formats/mrc: line 35) ok http://bio3d.colorado.edu/imod/doc/mrc_format.txt
(about/bug-reporting: line 64) ok https://forum.image.sc/tag/bio-formats
( about/whats-new: line 2859) ok http://blog.openmicroscopy.org/data-model/future-plans/2016/05/23/folders-upcoming/
(formats/bio-rad-gel: line 53) redirect http://biorad1sc-doc.readthedocs.io/ - with Found to https://biorad1sc-doc.readthedocs.io/en/latest/
(formats/bio-rad-gel: line 57) redirect http://biorad1sc-reader.readthedocs.io/ - with Found to https://biorad1sc-reader.readthedocs.io/en/latest/
(formats/gatan-digital-micrograph: line 27) redirect http://blake.bcm.edu/emanwiki/EMAN2 - permanently to https://blake.bcm.edu/emanwiki/EMAN2
(developers/java-library: line 95) redirect http://commons.apache.org/lang/ - with Found to https://commons.apache.org/proper/commons-lang/
(users/bisque/index: line 4) redirect http://bioimage.ucsb.edu/bisque - permanently to https://bioimage.ucsb.edu/bisque
(developers/java-library: line 98) redirect http://commons.apache.org/logging/ - with Found to https://commons.apache.org/proper/commons-logging/
(users/fiji/index: line 28) redirect http://downloads.openmicroscopy.org/bio-formats/ - permanently to https://downloads.openmicroscopy.org/bio-formats/
( formats/index: line 23) redirect http://downloads.openmicroscopy.org/images/ - permanently to https://downloads.openmicroscopy.org/images/
(developers/index: line 59) redirect http://downloads.openmicroscopy.org/latest/ome-files-cpp/ - with See Other to https://downloads.openmicroscopy.org/ome-files-cpp/0.5.0/
( about/whats-new: line 2879) redirect http://downloads.openmicroscopy.org/ome-files-cpp/ - permanently to https://downloads.openmicroscopy.org/ome-files-cpp/
(users/ome-server/index: line 17) redirect http://downloads.openmicroscopy.org/ome/2.6.1/ - permanently to https://downloads.openmicroscopy.org/ome/2.6.1/
(users/ome-server/index: line 117) redirect http://downloads.openmicroscopy.org/ome/code/BioFormats.pm - permanently to https://downloads.openmicroscopy.org/ome/code/BioFormats.pm
(users/ome-server/index: line 119) redirect http://downloads.openmicroscopy.org/ome/code/omeis.c - permanently to https://downloads.openmicroscopy.org/ome/code/omeis.c
( formats/cellh5: line 9) redirect http://cellh5.org/ - permanently to https://cellcognition-project.org/
( about/whats-new: line 2368) redirect http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_10.7.html#sect_10.7.1.3 - permanently to https://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_10.7.html
( formats/mng: line 34) redirect http://downloads.sourceforge.net/libmng/MNGsuite-20030305.zip - permanently to https://sourceforge.net/projects/libmng/files/libmng-testsuites/Release-20030305/MNGsuite-20030305.zip/download?use_mirror=master
(users/cellprofiler/index: line 4) redirect http://cellprofiler.org/ - permanently to https://cellprofiler.org/
(formats/metamorph-stack-stk: line 57) redirect http://dimin.net/ - permanently to https://dimin.net/
(users/farsight/index: line 19) ok http://farsight-toolkit.ee.uh.edu/wiki/FARSIGHT_HowToBuild
(users/farsight/index: line 4) ok http://farsight-toolkit.ee.uh.edu/wiki/Main_Page
(users/vaa3d/index: line 10) ok http://farsight-toolkit.ee.uh.edu/wiki/FARSIGHT_Tutorials/Building_Software/Bio-Formats/Building_C%2B%2B_Bindings
(users/farsight/index: line 11) ok http://farsight-toolkit.ee.uh.edu/wiki/NucleusEditor
(users/farsight/index: line 17) ok http://farsight-toolkit.ee.uh.edu/wiki/Special:FarsightDownloads
( about/whats-new: line 2556) redirect http://glencoesoftware.com/pressreleases/2016-08-30-glencoe-software-zeiss-partner-open-source-file-reader-whole-slide.html - permanently to https://www.glencoesoftware.com/pressreleases/2016-08-30-glencoe-software-zeiss-partner-open-source-file-reader-whole-slide.html
(developers/building-bioformats: line 99) redirect http://eclipse.org/downloads/compare.php?release=kepler - with Found to https://www.eclipse.org/downloads/packages/compare
(developers/java-library: line 149) ok http://googleapis.github.io/google-http-java-client
(users/fiji/index: line 4) redirect http://fiji.sc/ - permanently to https://fiji.sc/
(users/imagej/installing: line 8) redirect http://help.openmicroscopy.org/imagej.html - permanently to https://help.openmicroscopy.org/imagej.html
( users/icy/index: line 4) redirect http://icy.bioimageanalysis.org/ - permanently to https://icy.bioimageanalysis.org/
(users/vaa3d/index: line 4) ok http://home.penglab.com/
(formats/simplepci-hcimage: line 52) redirect http://hcimage.com/simple-pci-legacy/ - permanently to https://hcimage.com/simple-pci-legacy/
(users/fiji/index: line 12) redirect http://imagej.net/Bio-Formats - permanently to https://imagej.net/formats/bio-formats
(users/imglib/index: line 4) ok http://imglib2.net/
(users/imagej/index: line 26) redirect http://imagej.net/Image5D - permanently to https://imagej.net/plugins/image5d
(formats/olympus-oir: line 26) redirect http://imagej.net/OlympusImageJPlugin - permanently to https://imagej.net/formats/olympus
(users/imagej/features: line 7) redirect http://imagej.net/SpatialCalibration - permanently to https://imagej.net/imaging/spatial-calibration
(developers/java-library: line 65) ok http://jcommander.org/
( users/idl/index: line 17) ok http://karo03.bplaced.net/karo/IDL/_pro/ij_read_bio_formats.pro
( users/idl/index: line 17) ok http://karo03.bplaced.net/karo/ro_embed.php?file=IDL/index.html
( formats/ics: line 27) redirect http://libics.sourceforge.net/ - permanently to https://libics.sourceforge.net/
(developers/logging: line 19) redirect http://logging.apache.org/log4j - with Found to https://logging.apache.org/log4j/2.x/
(developers/matlab-dev: line 10) redirect http://mathworks.com/help/matlab/matlab_external/product-overview.html - permanently to https://www.mathworks.com/help/matlab/matlab_external/product-overview.html
(formats/animated-png: line 29) redirect http://ksquirrel.sourceforge.net/download.php - permanently to https://ksquirrel.sourceforge.net/download.php
(users/endrov/index: line 4) redirect http://ki.se/start - permanently to https://ki.se/
( formats/pgm: line 26) redirect http://netpbm.sourceforge.net/ - permanently to https://netpbm.sourceforge.net/
( formats/pgm: line 31) redirect http://netpbm.sourceforge.net/doc/pgm.html - permanently to https://netpbm.sourceforge.net/doc/pgm.html
(formats/imagepro-workspace: line 56) redirect http://poi.apache.org/ - permanently to https://poi.apache.org/
(developers/java-library: line 116) redirect http://objenesis.org - permanently to https://objenesis.org/
(developers/components: line 221) redirect http://poi.apache.org - permanently to https://poi.apache.org/
(developers/service: line 21) redirect http://spring.io - permanently to https://spring.io/
(users/imglib/index: line 10) redirect http://scif.io/ - permanently to https://scif.io/
(formats/bio-rad-pic: line 60) redirect http://svi.nl/ - with Found to https://svi.nl/HomePage
( formats/nrrd: line 26) redirect http://teem.sourceforge.net/nrrd/ - permanently to https://teem.sourceforge.net/nrrd/
( formats/trestle: line 26) redirect http://openslide.cs.cmu.edu/download/openslide-testdata/Trestle/ - permanently to https://openslide.cs.cmu.edu/download/openslide-testdata/Trestle/
( formats/nrrd: line 9) redirect http://teem.sourceforge.net/ - permanently to https://teem.sourceforge.net/
( formats/nrrd: line 34) redirect http://teem.sourceforge.net/nrrd/format.html - permanently to https://teem.sourceforge.net/nrrd/format.html
(formats/khoros-viff-bitmap: line 28) redirect http://netghost.narod.ru/gff/sample/images/viff/index.htm - permanently to https://netghost.narod.ru/gff/sample/images/viff/index.htm
(developers/format-documentation: line 13) redirect http://velocity.apache.org/ - permanently to https://velocity.apache.org/
(formats/bd-pathway: line 10) redirect http://www.bdbiosciences.com - permanently to https://www.bdbiosciences.com/en-gb
( formats/iplab: line 11) redirect http://www.bdbiosciences.com/ - permanently to https://www.bdbiosciences.com/en-gb
(formats/animated-png: line 34) ok http://wiki.mozilla.org/APNG_Specification
(formats/analyze-75: line 28) ok http://web.archive.org/web/20070927191351/http://www.mayo.edu/bir/PDF/ANALYZE75.pdf
( about/index: line 142) redirect http://visad.ssec.wisc.edu - with Found to https://visad.ssec.wisc.edu/
(developers/java-library: line 112) ok http://www.beanshell.org/license.html
(developers/java-library: line 110) ok http://www.beanshell.org
(users/endrov/index: line 4) ok http://www.bionut.ki.se/groups/tbu/
( formats/gif: line 9) redirect http://www.compuserve.com/ - with Found to https://www.compuserve.com/
(users/comstat2/index: line 4) ok http://www.comstat.dk/
(formats/minc-mri: line 9) ok http://www.bic.mni.mcgill.ca/ServicesSoftware/MINC
(formats/gatan-digital-micrograph-2: line 9) redirect http://www.gatan.com - permanently to https://www.gatan.com/
(formats/windows-bitmap: line 54) ok http://www.faqs.org/faqs/graphics/fileformats-faq/part3/section-18.html
(formats/olympus-fluoview-tiff: line 26) redirect http://www.dimin.net/ - permanently to https://dimin.net/
(formats/gatan-digital-micrograph: line 10) redirect http://www.gatan.com/ - permanently to https://www.gatan.com/
(formats/bio-rad-gel: line 31) redirect http://www.bio-rad.com/en-ch/product/image-lab-software - with Found to https://www.bio-rad.com/en-uk/product/image-lab-software?ID=KRE6P5E8Z
( formats/jpeg: line 9) ok http://www.ijg.org/
( formats/imagic: line 26) redirect http://www.imagescience.de/em2em.html - permanently to https://www.imagescience.de/em2em.html
( formats/imagic: line 9) redirect http://www.imagescience.de - permanently to https://www.imagescience.de/
(formats/bio-rad-gel: line 10) redirect http://www.bio-rad.com - permanently to https://www.bio-rad.com/
(formats/axon-raw-format: line 29) ok http://www.indecbiosystems.com/imagingworkbench/ApplicationNotes/IWAppNote11-ARF_File_Format.pdf
(formats/axon-raw-format: line 10) ok http://www.indecbiosystems.com/
(users/vaa3d/index: line 4) redirect http://www.hhmi.org/programs/biomedical-research/janelia-research-campus - permanently to https://www.janelia.org/
(formats/hamamatsu-vms: line 9) redirect http://www.hamamatsu.com - with Found to https://www.hamamatsu.com/jp/en.html
( formats/mng: line 9) ok http://www.libpng.org/pub/mng/mngnews.html
(developers/java-library: line 89) ok http://www.jgoodies.com/downloads/libraries/
( formats/mng: line 56) ok http://www.libpng.org/pub/mng/
( formats/mng: line 56) ok http://www.libpng.org/pub/mng/spec
( formats/png: line 9) ok http://www.libpng.org/pub/png/pngnews.html
( formats/png: line 58) ok http://www.libpng.org/pub/png/
( formats/png: line 32) ok http://www.libpng.org/pub/png/spec/iso/
(formats/lavision-imspector: line 9) redirect http://www.lavisionbiotec.com/ - with See Other to https://www.miltenyibiotec.com/about-us/miltenyi-biotec-companies/lavision-biotec-gmbh.html
(formats/3i-slidebook: line 9) redirect http://www.intelligent-imaging.com/ - with Found to https://www.intelligent-imaging.com/
(formats/li-cor-l2d: line 10) redirect http://www.licor.com/ - permanently to https://www.licor.com/env/products/trisonica/
(users/matlab/index: line 68) redirect http://www.mathworks.com/matlabcentral/fileexchange/32920-imread-for-multiple-life-science-image-file-formats - with Found to https://www.mathworks.com/matlabcentral/fileexchange/32920-imread-for-multiple-life-science-image-file-formats
( formats/lim: line 10) redirect http://www.lim.cz/ - permanently to https://www.laboratory-imaging.com/
(formats/deltavision: line 63) redirect http://www.mediacy.com/ - permanently to https://mediacy.com/
(formats/imagepro-sequence: line 28) redirect http://www.mediacy.com/imageproplus - permanently to https://mediacy.com/image-pro/
(formats/nikon-elements-tiff: line 9) redirect http://www.nikon.com - permanently to https://www.nikon.com/
( formats/nef: line 9) redirect http://www.nikon.com/ - permanently to https://www.nikon.com/
(formats/ome-tiff: line 9) ok http://www.openmicroscopy.org/
( formats/ome-xml: line 29) ok http://www.openmicroscopy.org/Schemas/
(formats/imspector-obf: line 11) redirect http://www.mpibpc.mpg.de/de - permanently to https://www.mpinat.mpg.de/de
( about/whats-new: line 2783) redirect http://www.openmicroscopy.org/info/slidebook - with Found to https://www.intelligent-imaging.com/technical-answers
( formats/nef: line 28) ok http://www.nikondigital.org/articles/library/nikon_d2x_first_impressions.htm
(formats/animated-png: line 28) redirect http://www.opera.com - permanently to https://www.opera.com:443/
( formats/dicom: line 38) ok http://www.osirix-viewer.com/resources/dicom-image-library/
( formats/nef: line 56) ok http://www.outbackphoto.com/workshop/NEF_conversion/nefconversion.html
( formats/nef: line 27) ok http://www.outbackphoto.com/workshop/NEF_conversion/neffile1.zip
(formats/picoquant-bin: line 9) redirect http://www.picoquant.com/ - permanently to https://www.picoquant.com/
( formats/fits: line 9) redirect http://www.nrao.edu/ - with Found to https://public.nrao.edu
( formats/aim: line 9) redirect http://www.scanco.ch/ - permanently to https://www.scanco.ch/
(formats/picoquant-bin: line 26) redirect http://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software - permanently to https://www.picoquant.com/products/category/software/symphotime-64-fluorescence-lifetime-imaging-and-correlation-software
( formats/nrrd: line 30) redirect http://www.sci.utah.edu/%7Egk/DTI-data/ - with unknown code to http://www.sci.utah.edu/~gk/DTI-data/
(users/qu-matlab/index: line 4) redirect http://www.scs2.net/home/index.php?option=com_content&view=article&id=46%3Aqu-for-matlab&catid=34%3Aqu&Itemid=55 - permanently to https://www.scs2.net/next/index.php?id=120
(developers/java-library: line 125) redirect http://www.slf4j.org - with Found to https://www.slf4j.org/
(formats/cellomics: line 9) redirect http://www.thermofisher.com/ - permanently to https://www.thermofisher.com/uk/en/home.html
(users/qu-matlab/index: line 13) redirect http://www.scs2.net/home/index.php?option=com_content&view=article&id=46%3Aqu-for-matlab&catid=34%3Aqu&Itemid=55&limitstart=3 - permanently to https://www.scs2.net/next/index.php?id=120
(users/visad/index: line 4) redirect http://www.ssec.wisc.edu/%7Ebillh/visad.html - with Found to https://www.ssec.wisc.edu/~billh/visad.html
( formats/rhk: line 10) redirect http://www.rhk-tech.com - permanently to https://www.rhk-tech.com/
(formats/ge-microct: line 28) redirect http://www.sci.utah.edu/cibc-software/cibc-datasets.html - permanently to https://www.sci.utah.edu/cibc-software/cibc-datasets.html
( formats/jpeg: line 29) redirect http://www.w3.org/Graphics/JPEG/jfif3.pdf - permanently to https://www.w3.org/Graphics/JPEG/jfif3.pdf
(users/farsight/index: line 4) redirect http://www.uh.edu/ - with Found to https://uh.edu/
(formats/amira-mesh: line 9) redirect http://www.vsg3d.com/ - permanently to https://www.thermofisher.com/uk/en/home/electron-microscopy/products/software-em-3d-vis/3d-visualization-analysis-software.html
(developers/java-library: line 140) redirect http://xerces.apache.org/xerces2-j - permanently to https://xerces.apache.org/xerces2-j/
(developers/java-library: line 143) redirect http://xerces.apache.org/xml-commons/components/external/ - permanently to https://xerces.apache.org/xml-commons/components/external/
(formats/visitech-xys: line 9) redirect http://www.visitech.co.uk/ - permanently to https://visitech.co.uk/
(developers/java-library: line 134) redirect http://xml.apache.org/xalan-j - permanently to https://xml.apache.org/xalan-j/
( formats/index: line 15) redirect http://zenodo.org - with Found to https://zenodo.org/
(developers/python-dev: line 10) ok https://allencellmodeling.github.io/aicsimageio/
( formats/dicom: line 37) broken https://barre.dev/medical/samples - HTTPSConnectionPool(host='barre.dev', port=443): Max retries exceeded with url: /medical/samples (Caused by NameResolutionError("<urllib3.connection.HTTPSConnection object at 0x7f27f57c4820>: Failed to resolve 'barre.dev' ([Errno -2] Name or service not known)"))
(developers/java-library: line 80) ok https://asm.ow2.io
( about/whats-new: line 491) ok https://bio-formats.readthedocs.io/en/stable/
( users/r/index: line 10) ok https://bioconductor.org
(users/vaa3d/index: line 4) redirect https://alleninstitute.org/what-we-do/brain-science/research/products-tools/vaa3d/ - permanently to https://alleninstitute.org/division/brain-science/
(developers/r-dev: line 10) ok https://bioconductor.org/packages/devel/bioc/html/RBioFormats.html
(developers/r-dev: line 28) ok https://bioconductor.org/packages/devel/bioc/vignettes/RBioFormats/inst/doc/RBioFormats.html
( formats/cv7000: line 10) redirect http://www.yokogawa.com/ - permanently to https://www.yokogawa.com/
( formats/unisoku: line 10) redirect http://www.unisoku.com - permanently to https://www.unisoku.com/
(users/i3dcore/index: line 4) ok https://cbia.fi.muni.cz/software/i3d-library.html
(users/i3dcore/index: line 4) ok https://cbia.fi.muni.cz
(developers/java-library: line 131) ok https://bitbucket.org/snakeyaml/snakeyaml
(developers/java-library: line 197) ok https://commons.apache.org/proper/commons-codec/
(formats/keller-lab-block: line 9) redirect https://bitbucket.org/fernandoamat/keller-lab-block-filetype/overview - with Found to https://bitbucket.org/fernandoamat/keller-lab-block-filetype/src
(developers/java-library: line 56) ok https://commons.apache.org/proper/commons-io/
(developers/java-library: line 59) ok https://commons.apache.org/proper/commons-lang/
(formats/jpeg-2000: line 27) ok https://code.google.com/archive/p/jj2000/
(developers/java-library: line 182) ok https://checkerframework.org/
(formats/quicktime-movie: line 32) ok https://developer.apple.com/documentation/quicktime-file-format
(users/mipav/index: line 4) ok https://cit.nih.gov/
(formats/ventana-bif: line 10) ok https://diagnostics.roche.com/global/en/home.html
(developers/java-library: line 188) ok https://developers.google.com/j2objc/
( formats/sbig: line 8) ok https://diffractionlimited.com/
(users/octave/index: line 34) ok https://docs.octave.org/interpreter/Making-Java-Classes-Available.html
( index: line 26) redirect https://docs.openmicroscopy.org/contributing/ - permanently to https://ome-contributing.readthedocs.io/en/latest/
(developers/components: line 145) redirect https://docs.openmicroscopy.org/contributing/ci-bio-formats.html - permanently to https://ome-contributing.readthedocs.io/en/latest/ci-bio-formats.html
(formats/pattern-file: line 96) ok https://docs.oracle.com/javase/7/docs/api/java/util/regex/Pattern.html
(developers/index: line 80) redirect https://docs.openmicroscopy.org/contributing/index.html - permanently to https://ome-contributing.readthedocs.io/en/latest/index.html
( formats/jpeg: line 51) ok https://docs.oracle.com/javase/7/docs/technotes/guides/imageio/
(users/comlinetools/index: line 162) ok https://docs.oracle.com/javase/7/docs/technotes/samples/hprof.html
( formats/sbig: line 26) redirect https://diffractionlimited.com/downloads/sbig/AppNoteArchive.zip - permanently to https://cdn.diffractionlimited.com/downloads/sbig/AppNoteArchive.zip
(formats/amira-mesh: line 29) ok https://downloads.openmicroscopy.org/images/AmiraMesh/
( about/whats-new: line 1358) ok https://downloads.openmicroscopy.org/images/BDV/
( about/whats-new: line 1360) ok https://downloads.openmicroscopy.org/images/CellH5/
( about/whats-new: line 1359) ok https://downloads.openmicroscopy.org/images/CellWorX/
(formats/cellomics: line 29) ok https://downloads.openmicroscopy.org/images/Cellomics/
( formats/dicom: line 44) ok https://downloads.openmicroscopy.org/images/DICOM/
(formats/deltavision: line 36) ok https://downloads.openmicroscopy.org/images/DV/
( formats/ecat7: line 29) ok https://downloads.openmicroscopy.org/images/ECAT7/
( about/whats-new: line 1362) ok https://downloads.openmicroscopy.org/images/Gatan/
( about/whats-new: line 1361) ok https://downloads.openmicroscopy.org/images/Flex/
(formats/hamamatsu-ndpi: line 36) ok https://downloads.openmicroscopy.org/images/Hamamatsu-NDPI/
(formats/hamamatsu-vms: line 32) ok https://downloads.openmicroscopy.org/images/Hamamatsu-VMS/
( about/whats-new: line 1363) ok https://downloads.openmicroscopy.org/images/ICS/
(formats/bitplane-imaris: line 41) ok https://downloads.openmicroscopy.org/images/Imaris-IMS/
(formats/incell-1000: line 30) ok https://downloads.openmicroscopy.org/images/InCell2000/
(formats/incell-3000: line 30) ok https://downloads.openmicroscopy.org/images/InCell3000/
( about/whats-new: line 1364) ok https://downloads.openmicroscopy.org/images/KLB/
( formats/leo: line 30) ok https://downloads.openmicroscopy.org/images/LEO/
(formats/leica-lif: line 36) ok https://downloads.openmicroscopy.org/images/Leica-LIF/
(formats/leica-scn: line 32) ok https://downloads.openmicroscopy.org/images/Leica-SCN/
( formats/mrc: line 36) ok https://downloads.openmicroscopy.org/images/MRC/
( about/whats-new: line 761) ok https://downloads.openmicroscopy.org/images/Leica-XLEF/
(formats/micro-manager: line 32) ok https://downloads.openmicroscopy.org/images/Micro-Manager/
(formats/nikon-nis-elements-nd2: line 32) ok https://downloads.openmicroscopy.org/images/ND2/
( formats/nifti: line 30) ok https://downloads.openmicroscopy.org/images/NIfTI/
(formats/imspector-obf: line 30) ok https://downloads.openmicroscopy.org/images/OBF/
( about/whats-new: line 1996) ok https://downloads.openmicroscopy.org/images/NRRD/
(formats/ome-tiff: line 31) ok https://downloads.openmicroscopy.org/images/OME-TIFF/
( about/whats-new: line 495) ok https://downloads.openmicroscopy.org/images/OME-TIFF/2016-06/BBBC017/
( about/whats-new: line 1038) ok https://downloads.openmicroscopy.org/images/OME-TIFF/2016-06/plate-companion/
( formats/ome-xml: line 31) ok https://downloads.openmicroscopy.org/images/OME-XML/
( about/whats-new: line 542) ok https://downloads.openmicroscopy.org/images/Olympus-FluoView/
(formats/olympus-oir: line 32) ok https://downloads.openmicroscopy.org/images/Olympus-OIR
( formats/png: line 34) ok https://downloads.openmicroscopy.org/images/PNG/
(formats/perkinelmer-operetta: line 29) ok https://downloads.openmicroscopy.org/images/PerkinElmer-Operetta/
( about/whats-new: line 1365) ok https://downloads.openmicroscopy.org/images/PerkinElmer-Columbus/
(formats/becker-hickl-fifo: line 29) ok https://downloads.openmicroscopy.org/images/SPC-FIFO/
(formats/aperio-svs-tiff: line 32) ok https://downloads.openmicroscopy.org/images/SVS/
( about/whats-new: line 127) ok https://datacommons.cancer.gov/repository/imaging-data-commons/
( formats/tiff: line 35) ok https://downloads.openmicroscopy.org/images/TIFF/
(formats/vectra-qptiff: line 29) ok https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/
( formats/trestle: line 31) ok https://downloads.openmicroscopy.org/images/Trestle/
(formats/vectra-qptiff: line 28) ok https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_Image%20Format.docx
( about/whats-new: line 1367) ok https://downloads.openmicroscopy.org/images/Zeiss-CZI/
( about/whats-new: line 1366) ok https://downloads.openmicroscopy.org/images/Ventana/
(developers/file-reader: line 144) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ChannelMerger.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/ChannelMerger.html
(developers/building-bioformats: line 37) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/ - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/
(developers/file-reader: line 148) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ChannelFiller.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/ChannelFiller.html
(users/imagej/load-images: line 157) redirect https://download.oracle.com/javase/1.5.0/docs/api/java/util/regex/Pattern.html - with Found to https://docs.oracle.com/javase/1.5.0/docs/api/java/util/regex/Pattern.html
(developers/reader-guide: line 67) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/CoreMetadata.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/CoreMetadata.html
(developers/file-reader: line 155) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/DimensionSwapper.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/DimensionSwapper.html
(developers/file-reader: line 140) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ChannelSeparator.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/ChannelSeparator.html
(developers/file-reader: line 136) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FileStitcher.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FileStitcher.html
(developers/reader-guide: line 6) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 50) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatException.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatException.html
(developers/reader-guide: line 67) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#core - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 170) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#datasetDescription - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 166) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#hasCompanionFiles - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 174) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#domains - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 67) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#initFile-java.lang.String- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/java-library: line 101) ok https://docs.unidata.ucar.edu/netcdf-java/5.3/userguide/index.html
(developers/reader-guide: line 115) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#isThisType-byte:A- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 84) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#makeFilterMetadata-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 78) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#metadata - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 159) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#suffixNecessary - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(developers/reader-guide: line 174) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/reader-guide: line 162) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatReader.html#suffixSufficient - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatReader.html
(users/comlinetools/domainlist: line 14) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#ASTRONOMY_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/reader-guide: line 32) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#CANNOT_GROUP - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/reader-guide: line 30) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#CAN_GROUP - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 15) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#EM_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 17) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#GEL_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 18) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#GRAPHICS_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 16) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#FLIM_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 19) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#HCS_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 21) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#LM_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/reader-guide: line 28) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#MUST_GROUP - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 22) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#MEDICAL_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 20) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#HISTOLOGY_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(users/comlinetools/domainlist: line 23) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#SEM_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/file-reader: line 10) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(users/comlinetools/domainlist: line 25) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#UNKNOWN_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/file-reader: line 21) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatHandler.html#setId-java.lang.String- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatHandler.html
(users/comlinetools/domainlist: line 24) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/FormatTools.html#SPM_DOMAIN - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/FormatTools.html
(developers/reader-guide: line 110) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#close-boolean- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/reader-guide: line 23) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#fileGroupOption-java.lang.String- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 52) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getImageCount-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/matlab-dev: line 255) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getIndex-int-int-int- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 67) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getDimensionOrder-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
( developers/wsi: line 41) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getOptimalTileHeight-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 79) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getPixelType-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 64) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getRGBChannelCount-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 92) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getMetadataValue-java.lang.String- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
( developers/wsi: line 41) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getOptimalTileWidth-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 49) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSeriesCount-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 61) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeC-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 43) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeX-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/reader-guide: line 38) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSeriesUsedFiles-boolean- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 58) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeT-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 55) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeZ-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 46) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#getSizeY-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 76) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isInterleaved-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 73) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isLittleEndian-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 70) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isRGB-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/reader-guide: line 12) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isSingleFile-java.lang.String- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/reader-guide: line 17) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#isThisType-loci.common.RandomAccessInputStream- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-reader: line 21) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#setSeries-int- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
( developers/wsi: line 21) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#setFlattenedResolutions-boolean- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/reader-guide: line 50) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatReader.html#openBytes-int-byte:A-int-int-int-int- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatReader.html
(developers/file-writer: line 6) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IFormatWriter.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IFormatWriter.html
(developers/file-reader: line 161) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ImageTools.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/ImageTools.html
(developers/file-reader: line 10) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ImageReader.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/ImageReader.html
( developers/wsi: line 25) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IPyramidHandler.html#getResolutionCount-- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IPyramidHandler.html
( developers/wsi: line 25) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/IPyramidHandler.html#setResolution-int- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/IPyramidHandler.html
(developers/file-reader: line 158) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/Memoizer.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/Memoizer.html
(developers/reader-guide: line 84) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/MetadataTools.html#populatePixels-loci.formats.meta.MetadataStore-loci.formats.IFormatReader- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/MetadataTools.html
(developers/reader-guide: line 94) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/MetadataTools.html#populatePixels-loci.formats.meta.MetadataStore-loci.formats.IFormatReader-boolean- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/MetadataTools.html
(developers/file-reader: line 151) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/MinMaxCalculator.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/MinMaxCalculator.html
(developers/matlab-dev: line 339) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/Memoizer.html#DEFAULT_MINIMUM_ELAPSED - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/Memoizer.html
(developers/matlab-dev: line 339) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/Memoizer.html#setId-java.lang.String- - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/Memoizer.html
(developers/file-reader: line 116) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/ReaderWrapper.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/ReaderWrapper.html
(developers/reader-guide: line 210) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/codec/BaseCodec.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/codec/BaseCodec.html
(developers/file-reader: line 161) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/gui/AWTImageTools.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/gui/AWTImageTools.html
( formats/options: line 76) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/in/DynamicMetadataOptions.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/in/DynamicMetadataOptions.html
(developers/file-reader: line 132) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/gui/BufferedImageReader.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/gui/BufferedImageReader.html
(users/octave/index: line 36) redirect https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/ - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/artifacts/
(developers/reader-guide: line 204) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/services/package-summary.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/services/package-summary.html
(users/comlinetools/index: line 24) redirect https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/bftools.zip - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/artifacts/bftools.zip
(developers/reader-guide: line 6) redirect https://downloads.openmicroscopy.org/latest/bio-formats/api/loci/formats/in/package-summary.html - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/api/loci/formats/in/package-summary.html
(users/imagej/index: line 13) redirect https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/bioformats_package.jar - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/artifacts/bioformats_package.jar
(developers/java-library: line 32) redirect https://downloads.openmicroscopy.org/latest/bio-formats/artifacts/formats-gpl.jar - permanently to https://downloads.openmicroscopy.org/bio-formats/7.3.0/artifacts/formats-gpl.jar
( formats/avi: line 68) ok https://en.wikipedia.org/wiki/Audio_Video_Interleave
(users/imglib/index: line 4) ok https://en.wikipedia.org/wiki/Color_depth
(developers/service: line 7) ok https://en.wikipedia.org/wiki/Component-based_software_engineering
(formats/minolta-mrw: line 26) ok https://en.wikipedia.org/wiki/Dcraw
(developers/service: line 7) ok https://en.wikipedia.org/wiki/Dependency_inversion_principle
(users/focalpoint/index: line 4) ok https://en.wikipedia.org/wiki/File_manager
( developers/wsi: line 14) ok https://en.wikipedia.org/wiki/Pyramid_(image_processing)
(developers/service: line 7) ok https://en.wikipedia.org/wiki/Dependency_injection
(developers/code-formatting: line 22) ok https://en.wikipedia.org/wiki/Indentation_style#Java
(users/focalpoint/index: line 4) ok https://en.wikipedia.org/wiki/Windows_Explorer
( formats/mrc: line 66) ok https://en.wikipedia.org/wiki/MRC_%28file_format%29
(developers/java-library: line 185) ok https://errorprone.info/
( formats/targa: line 9) ok https://en.wikipedia.org/wiki/Truevision
( formats/dicom: line 29) ok https://en.wikipedia.org/wiki/List_of_freeware_health_software
(developers/building-bioformats: line 21) ok https://git-scm.com/
( about/whats-new: line 788) ok https://github.blog/2021-09-01-improving-git-protocol-security-github/
( formats/fits: line 50) ok https://fits.gsfc.nasa.gov/
( about/whats-new: line 340) ok https://github.com/BIOP/quick-start-czi-reader
(developers/dotnet-dev: line 10) ok https://github.com/BiologyTools/BioFormatsNET6
( about/whats-new: line 3415) ok https://github.com/EsotericSoftware/kryo
(developers/java-library: line 83) ok https://github.com/EsotericSoftware/minlog
(developers/java-library: line 77) ok https://github.com/EsotericSoftware/reflectasm
(developers/java-library: line 209) ok https://github.com/FasterXML/jackson-core
(developers/java-library: line 215) ok https://github.com/FasterXML/jackson-databind
(developers/java-library: line 212) ok https://github.com/FasterXML/jackson-annotations
(developers/java-library: line 104) ok https://github.com/JodaOrg/joda-time
(developers/java-library: line 103) ok https://github.com/Unidata/thredds/blob/v4.3.22/cdm/license.txt
(developers/java-library: line 155) ok https://github.com/aslom/xpp3
(developers/java-library: line 71) ok https://github.com/airlift/aircompressor
(developers/java-library: line 157) ok https://github.com/aslom/xpp3/blob/master/LICENSE.txt
(developers/java-library: line 68) ok https://github.com/drewnoakes/metadata-extractor
(developers/java-library: line 179) ok https://github.com/findbugsproject/findbugs
(developers/java-library: line 86) ok https://github.com/google/guava
(developers/components: line 271) ok https://github.com/glencoesoftware/jxrlib
(developers/service: line 22) ok https://github.com/google/guice
(developers/java-library: line 113) ok https://github.com/hamcrest/JavaHamcrest
(formats/bitplane-imaris: line 30) ok https://github.com/imaris/ImarisWriter
(developers/components: line 77) ok https://github.com/jai-imageio/jai-imageio-core
(users/endrov/index: line 4) ok https://github.com/mahogny/Endrov
(formats/bio-rad-gel: line 65) ok https://github.com/itsayellow/biorad1sc_reader
(developers/components: line 212) ok https://github.com/mdbtools/mdbtools
(developers/java-library: line 119) ok https://github.com/perf4j/perf4j
(developers/commit-testing: line 136) ok https://github.com/psexton/matlab-xunit
(users/qupath/index: line 4) ok https://github.com/qupath/qupath-bioformats-extension/
(users/matlab/index: line 67) ok https://github.com/pramukta/bf-tools
(developers/java-library: line 169) ok https://github.com/stleary/JSON-java/blob/master/LICENSE
( users/itk/index: line 21) ok https://github.com/scifio/scifio-imageio
(developers/java-library: line 167) ok https://github.com/stleary/json-java
(developers/components: line 96) ok https://github.com/scijava/native-lib-loader
(users/imglib/index: line 10) ok https://github.com/scifio/scifio/blob/master/src/main/java/io/scif/img/ImgOpener.java
(developers/java-library: line 170) ok https://github.com/xerial/sqlite-jdbc
(developers/java-library: line 194) ok https://hc.apache.org/
(formats/zeiss-czi: line 27) ok https://github.com/zeiss-microscopy/libCZI
(formats/big-data-viewer: line 10) redirect https://imagej.net/BigDataViewer - permanently to https://imagej.net/plugins/bdv/
(formats/zeiss-lsm: line 27) redirect https://imagej.net/LSM_Toolbox - permanently to https://imagej.net/formats/lsm
( formats/tiff: line 72) redirect https://imagej.net/TIFF - permanently to https://imagej.net/formats/tiff
(developers/python-dev: line 25) ok https://imagej.net/libs/scifio
(formats/canon-dng: line 9) ok https://global.canon/en/index.html
(users/imagej/index: line 29) ok https://imagej.net/plugins/view5d
(developers/python-dev: line 25) ok https://imagej.net/software/imagej2
(formats/simplepci-hcimage: line 9) ok https://hcimage.com
(users/imagej/index: line 4) redirect https://imagej.nih.gov/ij/index.html - permanently to https://imagej.net/ij/index.html
(users/imagej/installing: line 13) redirect https://imagej.nih.gov/ij/download.html - permanently to https://imagej.net/ij/download.html
( formats/tiff: line 72) redirect https://imagej.nih.gov/ij/developer/source/ij/io/TiffDecoder.java.html - permanently to https://imagej.net/ij/developer/source/ij/io/TiffDecoder.java.html
(formats/gatan-digital-micrograph: line 26) redirect https://imagej.nih.gov/ij/plugins/DM3_Reader.html - permanently to https://imagej.net/ij/plugins/DM3_Reader.html
(users/imagej/managing-memory: line 65) redirect https://imagej.nih.gov/ij/docs/menus/edit.html#options - permanently to https://imagej.net/ij/docs/menus/edit.html
( formats/avi: line 27) redirect https://imagej.nih.gov/ij/plugins/avi-reader.html - permanently to https://imagej.net/ij/plugins/avi-reader.html
( formats/gif: line 27) redirect https://imagej.nih.gov/ij/plugins/agr.html - permanently to https://imagej.net/ij/plugins/agr.html
( formats/avi: line 28) redirect https://imagej.nih.gov/ij/plugins/avi.html - permanently to https://imagej.net/ij/plugins/avi.html
( about/index: line 64) redirect https://imagej.nih.gov/ij/list.html - permanently to https://imagej.net/ij/list.html
(formats/windows-bitmap: line 26) redirect https://imagej.nih.gov/ij/plugins/bmp-writer.html - permanently to https://imagej.net/ij/plugins/bmp-writer.html
(formats/bruker-mri: line 24) redirect https://imagej.nih.gov/ij/plugins/bruker.html - permanently to https://imagej.net/ij/plugins/bruker.html
(formats/bio-rad-pic: line 27) redirect https://imagej.nih.gov/ij/plugins/biorad.html - permanently to https://imagej.net/ij/plugins/biorad.html
( formats/gif: line 28) redirect https://imagej.nih.gov/ij/plugins/gif-stack-writer.html - permanently to https://imagej.net/ij/plugins/gif-stack-writer.html
( formats/eps: line 27) redirect https://imagej.nih.gov/ij/plugins/eps-writer.html - permanently to https://imagej.net/ij/plugins/eps-writer.html
( formats/iplab: line 27) redirect https://imagej.nih.gov/ij/plugins/iplab-reader.html - permanently to https://imagej.net/ij/plugins/iplab-reader.html
(formats/zeiss-lsm: line 28) redirect https://imagej.nih.gov/ij/plugins/lsm-reader.html - permanently to https://imagej.net/ij/plugins/lsm-reader.html
( formats/png: line 27) redirect https://imagej.nih.gov/ij/plugins/png-writer.html - permanently to https://imagej.net/ij/plugins/png-writer.html
(formats/deltavision: line 29) redirect https://imagej.nih.gov/ij/plugins/track/delta.html - permanently to https://imagej.net/ij/plugins/track/delta.html
(developers/components: line 194) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/DebugTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/DebugTools.html
(developers/components: line 194) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/DataTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/DataTools.html
(formats/imspector-obf: line 31) ok https://imspectordocs.readthedocs.io/en/latest/fileformat.html
(developers/components: line 194) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/DateTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/DateTools.html
(developers/components: line 187) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/Location.html
( users/itk/index: line 4) ok https://itk.org/
(developers/reader-guide: line 146) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html#getMappedId-java.lang.String- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/Location.html
(developers/in-memory: line 4) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html#mapFile-java.lang.String-loci.common.IRandomAccess- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/Location.html
(developers/logging: line 29) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Log4jTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/Log4jTools.html
(developers/logging: line 29) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/LogbackTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/LogbackTools.html
(developers/components: line 187) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/RandomAccessInputStream.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/RandomAccessInputStream.html
(developers/reader-guide: line 146) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/Location.html#mapId-java.lang.String-java.lang.String- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/Location.html
(developers/service: line 37) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/services/Service.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/services/Service.html
(developers/components: line 187) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/RandomAccessOutputStream.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/RandomAccessOutputStream.html
(developers/components: line 194) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/xml/XMLTools.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/xml/XMLTools.html
(developers/service: line 97) redirect https://javadoc.io/page/org.openmicroscopy/ome-common/latest/loci/common/services/ServiceFactory.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-common/6.0.22/loci/common/services/ServiceFactory.html
(developers/file-reader: line 83) redirect https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/units/quantity/Length.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/units/quantity/Length.html
(developers/file-reader: line 83) redirect https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/units/quantity/Length.html#value-ome.units.unit.Unit- - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/units/quantity/Length.html
(developers/matlab-dev: line 203) redirect https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/xml/meta/MetadataRetrieve.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/xml/meta/MetadataRetrieve.html
(developers/matlab-dev: line 311) redirect https://javadoc.io/page/org.openmicroscopy/ome-xml/latest/ome/xml/meta/MetadataStore.html - with See Other to https://javadoc.io/static/org.openmicroscopy/ome-xml/6.3.6/ome/xml/meta/MetadataStore.html
(developers/java-library: line 164) ok https://javaee.github.io/jaxb-v2/
( about/index: line 58) ok https://lists.openmicroscopy.org.uk/pipermail/ome-devel
( about/index: line 61) ok https://lists.openmicroscopy.org.uk/pipermail/ome-users
( formats/jpx: line 9) ok https://jpeg.org/jpeg2000/
(developers/java-library: line 107) ok https://junit.org/junit4/
( formats/dicom: line 35) ok https://learn.canceridc.dev/data/downloading-data
(developers/java-library: line 227) ok https://logback.qos.ch
( about/index: line 66) ok https://lists.umn.edu/cgi-bin/wa?A0=confocalmicroscopy
(developers/components: line 96) ok https://libjpeg-turbo.org
(developers/matlab-dev: line 56) redirect https://mathworks.com/help/matlab/matlab_env/java-opts-file.html - permanently to https://www.mathworks.com/help/matlab/matlab_env/java-opts-file.html
(developers/matlab-dev: line 29) redirect https://mathworks.com/help/matlab/matlab_external/java-heap-memory-preferences.html - permanently to https://www.mathworks.com/help/matlab/matlab_external/java-heap-memory-preferences.html
( about/index: line 142) ok https://loci.wisc.edu/bio-formats/
(developers/matlab-dev: line 56) redirect https://mathworks.com/help/matlab/matlab_env/matlab-startup-folder.html - permanently to https://www.mathworks.com/help/matlab/matlab_env/matlab-startup-folder.html
(users/visbio/index: line 4) ok https://loci.wisc.edu/visbio/
(developers/matlab-dev: line 36) redirect https://mathworks.com/help/matlab/ref/prefdir.html - permanently to https://www.mathworks.com/help/matlab/ref/prefdir.html
(users/matlab/index: line 15) redirect https://mathworks.com/matlabcentral/answers/index - permanently to https://www.mathworks.com/matlabcentral/answers/index
(users/micromanager/index: line 4) ok https://micro-manager.org
(formats/micro-manager: line 26) ok https://micro-manager.org/
(users/micromanager/index: line 60) ok https://micro-manager.org/Micro-Manager_User's_Guide#files-on-disk
(users/mipav/index: line 4) ok https://mipav.cit.nih.gov/
(users/octave/index: line 4) ok https://octave.org
( about/whats-new: line 3413) ok https://ome-model.readthedocs.io/en/stable/
(developers/java-library: line 146) ok https://min.io
( formats/avi: line 68) redirect https://msdn.microsoft.com/en-us/library/ms779636.aspx - permanently to https://learn.microsoft.com/en-us/previous-versions//ms779636(v=vs.85)?redirectedfrom=MSDN
( developers/wsi: line 81) redirect https://ome-model.readthedocs.io/en/stable//omero-pyramid/index.html - with Found to https://ome-model.readthedocs.io/en/stable/omero-pyramid/index.html
( about/whats-new: line 3246) redirect https://ome-model.readthedocs.io/en/stable//schemas/january-2015.html - with Found to https://ome-model.readthedocs.io/en/stable/schemas/january-2015.html
(formats/ome-tiff: line 7) ok https://ome-model.readthedocs.io/en/stable/ome-tiff/index.html
( developers/wsi: line 57) ok https://ome-model.readthedocs.io/en/stable/ome-tiff/specification.html
( about/index: line 9) ok https://ome-model.readthedocs.io/en/stable/ome-tiff
( formats/ome-xml: line 7) ok https://ome-model.readthedocs.io/en/stable/ome-xml/index.html
( about/index: line 168) ok https://ome-model.readthedocs.io/en/stable/ome-xml/java-library.html
( about/whats-new: line 2435) ok https://ome-model.readthedocs.io/en/stable/schemas/june-2016-2.html
( about/whats-new: line 2859) ok https://ome-model.readthedocs.io/en/stable/schemas/june-2016.html
( about/index: line 158) ok https://ome-model.readthedocs.io/en/stable/ome-xml
(users/comlinetools/conversion: line 299) ok https://openslide.cs.cmu.edu/download/openslide-testdata/Aperio/
(formats/bio-rad-gel: line 64) ok https://pypi.org/project/biorad1sc-reader/
( formats/trestle: line 32) ok https://openslide.org/Trestle%20format/
(formats/hamamatsu-vms: line 33) ok https://openslide.org/Hamamatsu%20format/
(formats/aperio-svs-tiff: line 26) ok https://openslide.org
(developers/python-dev: line 25) ok https://pypi.org/project/pyimagej
( formats/dicom: line 35) ok https://portal.imaging.datacommons.cancer.gov/
(developers/python-dev: line 51) ok https://pypi.org/project/python-bioformats
(users/imagej/load-images: line 79) ok https://scif.io/images/
(users/qupath/index: line 4) ok https://qupath.github.io/
( users/iqm/index: line 4) ok https://sourceforge.net/projects/iqm/
( formats/mng: line 26) ok https://sourceforge.net/projects/libmng/
( about/index: line 87) ok https://semver.org
( formats/mng: line 30) ok https://sourceforge.net/projects/libmng/files/libmng-testsuites/MNGsuite-1.0/MNGsuite.zip/download
(developers/java-library: line 53) ok https://sissource.ethz.ch/sispub/base/
(developers/java-library: line 79) ok https://spdx.org/licenses/BSD-3-Clause.html
(developers/java-library: line 52) ok https://spdx.org/licenses/Apache-2.0.html
(developers/java-library: line 205) ok https://spdx.org/licenses/EPL-1.0.html
(developers/java-library: line 64) ok https://spdx.org/licenses/BSD-2-Clause.html
(developers/java-library: line 127) ok https://spdx.org/licenses/MIT.html
(developers/java-library: line 184) ok https://spdx.org/licenses/GPL-2.0.html
(developers/java-library: line 148) ok https://spdx.org/licenses/AGPL-3.0-only.html
(developers/java-library: line 109) ok https://spdx.org/licenses/CPL-1.0.html
(developers/java-library: line 158) ok https://square.github.io/okhttp/
(formats/zeiss-lsm: line 64) ok https://svi.nl/HomePage
(developers/java-library: line 161) ok https://square.github.io/okio/
(formats/quicktime-movie: line 27) redirect https://support.apple.com/downloads/quicktime - with Found to https://support.apple.com/en-us/docs
(formats/quicktime-movie: line 74) redirect https://support.apple.com/quicktime - permanently to https://support.apple.com/guide/quicktime-player/welcome/mac
(developers/java-library: line 128) ok https://testng.org/
( about/index: line 57) broken https://trac.openmicroscopy.org/ome - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome
(developers/service: line 29) broken https://trac.openmicroscopy.org/ome/ticket/463 - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome/ticket/463
( about/whats-new: line 3561) broken https://trac.openmicroscopy.org - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome
(developers/index: line 76) broken https://trac.openmicroscopy.org/ome/report/44 - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome/query?status=accepted&status=new&status=reopened&component=Bio-Formats&group=type&max=1000&col=id&col=summary&col=status&col=owner&col=priority&col=milestone&col=time&col=changetime&col=reporter&col=cc&report=44&order=priority
(developers/index: line 76) ok https://trello.com/b/4EXb35xQ/getting-started
(developers/service: line 29) broken https://trac.openmicroscopy.org/ome/ticket/464 - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome/ticket/464
(formats/volocity-library-clipping: line 51) broken https://trac.openmicroscopy.org/ome/ticket/6413 - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome/ticket/6413
(developers/export: line 134) broken https://trac.openmicroscopy.org/ome/query?status=accepted&status=new&status=reopened&keywords=~export&component=Bio-Formats&col=id&col=summary&col=status&col=type&col=priority&col=milestone&col=component&order=priority - 500 Server Error: Internal Server Error for url: https://trac.openmicroscopy.org/ome/query?status=accepted&status=new&status=reopened&keywords=~export&component=Bio-Formats&col=id&col=summary&col=status&col=type&col=priority&col=milestone&col=component&order=priority
( formats/gif: line 33) ok https://tronche.com/computer-graphics/gif/
(developers/matlab-dev: line 75) ok https://uk.mathworks.com/help/matlab/matlab_external/java-heap-memory-preferences.html
(developers/non-java-code: line 11) ok https://uw-loci.github.io/interfacing-non-java-code
( about/index: line 130) ok https://uw-loci.github.io/why-java
(developers/matlab-dev: line 77) ok https://uk.mathworks.com/matlabcentral/answers/92813-how-do-i-increase-the-heap-space-for-the-java-vm-in-matlab-6-0-r12-and-later-versions
( about/index: line 16) ok https://uw-loci.github.io/oss
(developers/java-library: line 50) ok https://unlimited.ethz.ch/display/JHDF/
(formats/varian-fdf: line 11) redirect https://www.agilent.com/home - permanently to https://www.agilent.com
( formats/dicom: line 36) redirect https://wsi.orthanc-server.com/orthanc/app/explorer.html - permanently to https://orthanc.uclouvain.be/wsi/
(formats/pict-macintosh-picture: line 9) ok https://www.apple.com
(formats/quicktime-movie: line 10) ok https://www.apple.com/
(formats/khoros-viff-bitmap: line 11) ok https://www.accusoft.com/company/
(formats/vectra-qptiff: line 10) ok https://www.akoyabio.com
( formats/tiff: line 29) ok https://www.awaresystems.be/imaging/tiff/bigtiff.html#samples
( formats/tiff: line 72) ok https://www.awaresystems.be/imaging/tiff/faq.html#q3
( formats/tiff: line 72) ok https://www.awaresystems.be/imaging/tiff/bigtiff.html
( formats/tiff: line 34) ok https://www.awaresystems.be/imaging/tiff.html
(formats/amersham-biosciences-gel: line 53) ok https://www.awaresystems.be/imaging/tiff/tifftags/docs/gel.html
(formats/becker-hickl-fifo: line 10) ok https://www.becker-hickl.com/
(formats/becker-hickl-spcimage: line 30) ok https://www.becker-hickl.com/products/spcimage/
(users/focalpoint/index: line 4) ok https://www.bioinformatics.babraham.ac.uk/projects/focalpoint/
(formats/alicona-3d: line 10) ok https://www.alicona.com/
(formats/iplab-mac: line 10) ok https://www.biovis.com/
(formats/becker-hickl-fifo: line 28) ok https://www.becker-hickl.com/literature/handbooks/
( formats/iplab: line 11) redirect https://www.biovis.com/iplab.htm - permanently to https://www.biovis.com/manufacturers.html#legacy.html
(formats/bruker-mri: line 7) redirect https://www.bruker.com/ - permanently to https://www.bruker.com/en.html
(users/cellprofiler/index: line 4) ok https://www.broadinstitute.org/imaging
( formats/mrc: line 12) ok https://www.ccpem.ac.uk/mrc_format/mrc_format.php
( formats/mrc: line 61) ok https://www.ccpem.ac.uk/mrc_format/mrc2014.php#note8
( formats/dicom: line 27) ok https://www.dclunie.com/medical-image-faq/html/part8.html#DICOMFileConvertorsAndViewers
( formats/dicom: line 33) ok https://www.dclunie.com/medical-image-faq/html/part8.html#DICOMImageSamples
( formats/dicom: line 28) ok https://www.dclunie.com/medical-image-faq/html/part8.html#DICOMToolkits
(formats/prairie-tech-tiff: line 9) redirect https://www.bruker.com/products/fluorescence-microscopes/ultima-multiphoton-microscopy/ultima-in-vitro/overview.html - permanently to https://www.bruker.com/en/products-and-solutions/fluorescence-microscopy/multiphoton-microscopes/ultima-in-vitro.html
( formats/dicom: line 73) ok https://www.dicomstandard.org/
(formats/kodak-bip: line 9) ok https://www.carestream.com/en/us
(formats/hamamatsu-aquacosmos-naf: line 9) redirect https://www.hamamatsu.com/ - with Found to https://www.hamamatsu.com/jp/en.html
( formats/dicom: line 9) ok https://www.dicomstandard.org/dsc/
( formats/imacon: line 10) ok https://www.hasselblad.com/
( about/index: line 84) ok https://www.ietf.org/rfc/rfc2119.txt
(formats/hitachi-s-4800: line 9) ok https://www.hitachi-hightech.com/file/us/pdf/library/technical/Hitachi_4800_STEM.pdf
( formats/dicom: line 42) ok https://www.dicomstandard.org/current/
( about/whats-new: line 3183) ok https://www.intelligent-imaging.com
(formats/3i-slidebook: line 52) ok https://www.intelligent-imaging.com/slidebook
(formats/hamamatsu-ndpi: line 29) ok https://www.hamamatsu.com/eu/en/product/life-science-and-medical-systems/digital-slide-scanner/U12388-01.html
(formats/3i-slidebook-7: line 27) ok https://www.intelligent-imaging.com/slidebook/
(formats/canon-dng: line 26) ok https://www.irfanview.com/
( formats/jpeg: line 56) redirect https://www.jpeg.org/jpeg/index.html - permanently to https://jpeg.org/jpeg/index.html
(formats/ionpath-mibi: line 9) ok https://www.ionpath.com/
(users/knime/index: line 4) ok https://www.knime.com/
( formats/jpk: line 9) redirect https://www.jpk.com - permanently to https://www.bruker.com/de/products-and-solutions/microscopes/bioafm.html?utm_source=JPK
( formats/quesant: line 11) redirect https://www.kla-tencor.com/ - permanently to https://www.kla.com/
(formats/leica-lcs-lei: line 9) ok https://www.leica-microsystems.com/
(formats/leica-lif: line 27) ok https://www.leica-microsystems.com/products/microscope-software/p/leica-las-x-ls/
(formats/aperio-afi: line 10) ok https://www.leicabiosystems.com/
(formats/aperio-afi: line 49) ok https://www.leicabiosystems.com/digital-pathology/manage/aperio-imagescope/
(formats/minolta-mrw: line 9) redirect https://www.konicaminolta.com/uk-en/index.html - permanently to https://www.konicaminolta.co.uk/en-gb
( formats/jeol: line 10) redirect https://www.jeol.co.jp/en/ - permanently to https://www.jeol.com/
(users/matlab/index: line 4) ok https://www.mathworks.com/products/matlab.html
(users/graphic-con/index: line 4) ok https://www.lemkesoft.de/en/image-editing-slideshow-browser-batch-conversion-metadata-and-more-on-your-mac/
( formats/tiff: line 33) ok https://www.loc.gov/preservation/digital/formats/fdd/fdd000022.shtml
(formats/amnis-flowsight: line 10) -ignored- https://www.merckmillipore.com: service unavailable
( formats/avi: line 9) ok https://www.microsoft.com/
(formats/lambert-instruments-flim: line 9) redirect https://www.lambertinstruments.com - permanently to https://lambertinstruments.com/
(developers/java-library: line 206) ok https://www.mchange.com/projects/mchange-commons-java/
(developers/java-library: line 203) ok https://www.mchange.com/projects/c3p0/
(formats/metamorph-75-tiff: line 10) ok https://www.moleculardevices.com/
(formats/animated-png: line 27) ok https://www.mozilla.org/en-US/firefox
(formats/metamorph-stack-stk: line 60) redirect https://www.moleculardevices.com/systems/metamorph-research-imaging/metamorph-microscopy-automation-and-image-analysis-software - permanently to https://www.moleculardevices.com/products/cellular-imaging-systems/high-content-analysis/metamorph-microscopy
(formats/mikroscan-tiff: line 10) ok https://www.mikroscan.com/
( formats/nifti: line 9) ok https://www.nih.gov/
( about/whats-new: line 265) ok https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6489422/
( about/index: line 36) redirect https://www.ncbi.nlm.nih.gov/pubmed/20513764 - permanently to https://pubmed.ncbi.nlm.nih.gov/20513764/
(formats/nikon-nis-elements-nd2: line 9) redirect https://www.nikonusa.com/en/index.page - permanently to https://www.nikonusa.com
( formats/nifti: line 28) ok https://www.nitrc.org/docman/view.php/26/204/TheNIfTI
(formats/nikon-nis-elements-nd2: line 26) redirect https://www.nikoninstruments.com/Products/Software/NIS-Elements-Advanced-Research/NIS-Elements-Viewer - permanently to https://www.microscope.healthcare.nikon.com/products/software/nis-elements/nis-elements-advanced-research
( users/idl/index: line 4) ok https://www.nv5geospatialsoftware.com/Products/IDL
(formats/olympus-fluoview-fv1000: line 26) ok https://www.olympus-lifescience.com/en/
( about/whats-new: line 2172) ok https://www.openmicroscopy.org
(developers/matlab-dev: line 80) ok https://www.openmicroscopy.org/2015/04/28/omero-bio-formats-5-1-1.html
(users/comlinetools/mkfake: line 19) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2015-01/SPW_xsd.html#PlateAcquisition_ID
(formats/olympus-sis-tiff: line 9) ok https://www.olympus-sis.com/
(formats/cellsens-vsi: line 9) ok https://www.olympus-global.com
(metadata-summary: line 974) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Annotation_Description
(metadata-summary: line 969) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#AnnotationRef_ID
(formats/zeiss-czi: line 60) ok https://www.microsoft.com/en-us/download/details.aspx?id=48145
(metadata-summary: line 2094) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData
(metadata-summary: line 979) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Annotation_ID
(metadata-summary: line 984) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Annotation_Namespace
(metadata-summary: line 964) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Arc_Type
(metadata-summary: line 989) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BooleanAnnotation_Value
(metadata-summary: line 2099) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData_BigEndian
(metadata-summary: line 2109) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData_Compression
(metadata-summary: line 2104) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#BinData_Length
(metadata-summary: line 994) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_AcquisitionMode
(metadata-summary: line 1004) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_Color
(metadata-summary: line 1009) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_ContrastMethod
(metadata-summary: line 1014) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_EmissionWavelength
(metadata-summary: line 1019) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_ExcitationWavelength
(metadata-summary: line 1029) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_Fluor
(metadata-summary: line 1034) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_ID
(metadata-summary: line 1039) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_IlluminationType
(metadata-summary: line 1059) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_NDFilter
(metadata-summary: line 1064) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_Name
(metadata-summary: line 1104) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#CommentAnnotation_Value
(metadata-summary: line 1069) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_PinholeSize
(metadata-summary: line 1074) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_PockelCellSetting
(metadata-summary: line 1114) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dataset_Description
(metadata-summary: line 1079) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Channel_SamplesPerPixel
(metadata-summary: line 2839) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DatasetRef_ID
(metadata-summary: line 1129) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dataset_ID
(metadata-summary: line 1139) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dataset_Name
(metadata-summary: line 1204) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Binning
(metadata-summary: line 1209) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Gain
(metadata-summary: line 1214) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_ID
(metadata-summary: line 1219) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Offset
(metadata-summary: line 1224) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_ReadOutRate
(metadata-summary: line 1229) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DetectorSettings_Voltage
(metadata-summary: line 1144) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_AmplificationGain
(metadata-summary: line 1154) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Gain
(metadata-summary: line 1159) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_ID
(metadata-summary: line 1179) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Offset
(metadata-summary: line 1189) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Type
(metadata-summary: line 1194) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Voltage
(metadata-summary: line 1284) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DoubleAnnotation_Value
(metadata-summary: line 1199) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Detector_Zoom
(metadata-summary: line 1574) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#DichroicRef_ID
(metadata-summary: line 1239) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Dichroic_ID
(metadata-summary: line 1329) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_RadiusY
(metadata-summary: line 1324) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_RadiusX
(metadata-summary: line 1389) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experiment_Description
(metadata-summary: line 1374) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_X
(metadata-summary: line 1379) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Ellipse_Y
(metadata-summary: line 1399) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experiment_ID
(metadata-summary: line 1664) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimentRef_ID
(metadata-summary: line 1404) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experiment_Type
(metadata-summary: line 1454) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroup_Description
(metadata-summary: line 1119) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroupRef_ID
(metadata-summary: line 1464) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroup_ID
(metadata-summary: line 1124) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterRef_ID
(metadata-summary: line 1474) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ExperimenterGroup_Name
(metadata-summary: line 1414) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_Email
(metadata-summary: line 1424) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_ID
(metadata-summary: line 1419) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_FirstName
(metadata-summary: line 1429) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_Institution
(metadata-summary: line 1434) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_LastName
(metadata-summary: line 1439) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_MiddleName
(metadata-summary: line 1444) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Experimenter_UserName
(metadata-summary: line 1579) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FilterRef_ID
(metadata-summary: line 1509) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filament_Type
(metadata-summary: line 1024) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FilterSetRef_ID
(metadata-summary: line 1589) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FilterSet_ID
(metadata-summary: line 1539) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filter_FilterWheel
(metadata-summary: line 1619) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Folder_Description
(metadata-summary: line 1544) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filter_ID
(metadata-summary: line 1624) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#FolderRef_ID
(metadata-summary: line 1569) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Filter_Type
(developers/components: line 231) ok https://wiki.tcl-lang.org/page/Metakit/
(metadata-summary: line 1649) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_AcquisitionDate
(metadata-summary: line 1629) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Folder_ID
(metadata-summary: line 1659) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_Description
(metadata-summary: line 1639) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Folder_Name
(metadata-summary: line 1134) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImageRef_ID
(metadata-summary: line 1709) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_CO2Percent
(metadata-summary: line 1704) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_AirPressure
(metadata-summary: line 1694) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_Name
(metadata-summary: line 1679) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Image_ID
(metadata-summary: line 1714) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_Humidity
(metadata-summary: line 1684) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#InstrumentRef_ID
(metadata-summary: line 1719) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ImagingEnvironment_Temperature
(metadata-summary: line 1729) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Instrument_ID
(metadata-summary: line 1809) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Label_X
(metadata-summary: line 1814) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Label_Y
(metadata-summary: line 1819) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_FrequencyMultiplication
(metadata-summary: line 1829) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_LaserMedium
(metadata-summary: line 1849) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_PockelCell
(metadata-summary: line 1859) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Pulse
(metadata-summary: line 1869) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_RepetitionRate
(metadata-summary: line 1879) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Tuneable
(metadata-summary: line 1889) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Wavelength
(metadata-summary: line 1884) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Laser_Type
(metadata-summary: line 1469) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Leader_ID
(metadata-summary: line 1044) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSourceSettings_Attenuation
(metadata-summary: line 1049) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSourceSettings_ID
(metadata-summary: line 1054) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSourceSettings_Wavelength
(metadata-summary: line 954) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSource_Power
(metadata-summary: line 934) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LightSource_ID
(metadata-summary: line 1979) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_MarkerEnd
(metadata-summary: line 1984) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_MarkerStart
(metadata-summary: line 2029) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_X1
(metadata-summary: line 2089) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#LongAnnotation_Value
(metadata-summary: line 2034) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_X2
(metadata-summary: line 2039) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_Y1
(metadata-summary: line 2044) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Line_Y2
(metadata-summary: line 939) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_LotNumber
(metadata-summary: line 944) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_Manufacturer
(metadata-summary: line 949) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_Model
(metadata-summary: line 959) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ManufacturerSpec_SerialNumber
(metadata-summary: line 2134) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_Height
(metadata-summary: line 2189) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_Width
(metadata-summary: line 2194) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_X
(metadata-summary: line 1689) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#MicrobeamManipulationRef_ID
(metadata-summary: line 2199) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Mask_Y
(metadata-summary: line 2209) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#MicrobeamManipulation_ID
(metadata-summary: line 2219) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#MicrobeamManipulation_Type
(metadata-summary: line 2329) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_CorrectionCollar
(metadata-summary: line 2259) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Microscope_Type
(metadata-summary: line 2334) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_ID
(metadata-summary: line 2339) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_Medium
(metadata-summary: line 2344) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ObjectiveSettings_RefractiveIndex
(metadata-summary: line 2274) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_Correction
(metadata-summary: line 2269) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_CalibratedMagnification
(metadata-summary: line 2279) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_ID
(metadata-summary: line 2284) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_Immersion
(metadata-summary: line 2289) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_Iris
(metadata-summary: line 2294) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_LensNA
(metadata-summary: line 2314) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_NominalMagnification
(metadata-summary: line 2324) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Objective_WorkingDistance
(metadata-summary: line 2354) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_BigEndian
(metadata-summary: line 2359) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_DimensionOrder
(metadata-summary: line 2364) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_ID
(metadata-summary: line 2374) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeX
(metadata-summary: line 2369) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_Interleaved
(metadata-summary: line 2379) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeY
(metadata-summary: line 2384) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeZ
(metadata-summary: line 2389) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SignificantBits
(metadata-summary: line 2394) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeC
(metadata-summary: line 2399) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeT
(metadata-summary: line 2404) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeX
(metadata-summary: line 2409) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeY
(metadata-summary: line 2414) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_SizeZ
(metadata-summary: line 2419) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_TimeIncrement
(metadata-summary: line 2424) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pixels_Type
(metadata-summary: line 2444) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_HashSHA1
(metadata-summary: line 2434) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_DeltaT
(metadata-summary: line 2439) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_ExposureTime
(metadata-summary: line 2449) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_PositionX
(metadata-summary: line 2454) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_PositionY
(metadata-summary: line 2459) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_PositionZ
(metadata-summary: line 2544) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_Description
(metadata-summary: line 2464) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_TheC
(metadata-summary: line 2469) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_TheT
(metadata-summary: line 2474) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plane_TheZ
(metadata-summary: line 2549) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_EndTime
(metadata-summary: line 2554) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_ID
(metadata-summary: line 2564) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_Name
(metadata-summary: line 2559) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_MaximumFieldCount
(metadata-summary: line 2494) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Description
(metadata-summary: line 2569) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#PlateAcquisition_StartTime
(metadata-summary: line 2489) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Columns
(metadata-summary: line 2484) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_ColumnNamingConvention
(metadata-summary: line 2499) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_ExternalIdentifier
(metadata-summary: line 2504) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_ID
(metadata-summary: line 2509) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Name
(metadata-summary: line 2519) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Rows
(metadata-summary: line 2514) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_RowNamingConvention
(metadata-summary: line 2524) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_Status
(metadata-summary: line 2529) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_WellOriginX
(metadata-summary: line 2534) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Plate_WellOriginY
(metadata-summary: line 2654) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Point_X
(metadata-summary: line 2659) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Point_Y
(metadata-summary: line 2844) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Project_Description
(metadata-summary: line 2699) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polygon_Points
(metadata-summary: line 2779) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polyline_MarkerEnd
(metadata-summary: line 2784) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polyline_MarkerStart
(metadata-summary: line 2859) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Project_ID
(metadata-summary: line 2864) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Project_Name
(metadata-summary: line 2789) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Polyline_Points
(metadata-summary: line 2874) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROI_Description
(metadata-summary: line 1644) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROIRef_ID
(metadata-summary: line 1864) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Pump_ID
(metadata-summary: line 2894) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_Description
(metadata-summary: line 3244) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ReagentRef_ID
(metadata-summary: line 2879) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROI_ID
(metadata-summary: line 2899) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_ID
(metadata-summary: line 2904) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_Name
(metadata-summary: line 2884) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#ROI_Name
(metadata-summary: line 2909) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Reagent_ReagentIdentifier
(metadata-summary: line 3014) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Description
(metadata-summary: line 2939) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_Height
(metadata-summary: line 2994) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_Width
(metadata-summary: line 2999) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_X
(metadata-summary: line 3004) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Rectangle_Y
(metadata-summary: line 3019) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ID
(metadata-summary: line 3024) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Name
(metadata-summary: line 3039) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ProtocolIdentifier
(metadata-summary: line 3034) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ProtocolDescription
(metadata-summary: line 3049) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ReagentSetIdentifier
(metadata-summary: line 3044) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_ReagentSetDescription
(metadata-summary: line 3029) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Screen_PlateRef_ID
(metadata-summary: line 3054) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Screen_Type
(metadata-summary: line 1289) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FillColor
(metadata-summary: line 1294) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FillRule
(metadata-summary: line 1299) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FontFamily
(metadata-summary: line 1304) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FontSize
(metadata-summary: line 1309) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_FontStyle
(metadata-summary: line 1314) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_ID
(metadata-summary: line 1319) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_Locked
(metadata-summary: line 1334) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_StrokeColor
(metadata-summary: line 1339) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_StrokeDashArray
(metadata-summary: line 1344) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_StrokeWidth
(metadata-summary: line 1349) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_Text
(metadata-summary: line 1369) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_Transform
(metadata-summary: line 1354) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_TheC
(metadata-summary: line 1359) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_TheT
(metadata-summary: line 1364) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Shape_TheZ
(metadata-summary: line 3059) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_Name
(metadata-summary: line 3064) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_X
(metadata-summary: line 3099) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TagAnnotation_Value
(metadata-summary: line 3074) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_Z
(metadata-summary: line 3124) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TermAnnotation_Value
(metadata-summary: line 3069) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#StageLabel_Y
(metadata-summary: line 3129) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_FirstC
(metadata-summary: line 3134) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_FirstT
(metadata-summary: line 3139) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_FirstZ
(metadata-summary: line 3149) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_PlaneCount
(metadata-summary: line 3144) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_IFD
(metadata-summary: line 3174) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TimestampAnnotation_Value
(metadata-summary: line 3204) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TiffData_TiffData_UUID_FileName
(metadata-summary: line 3179) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutIn
(metadata-summary: line 3184) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutInTolerance
(metadata-summary: line 3189) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutOut
(metadata-summary: line 3194) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_CutOutTolerance
(metadata-summary: line 3209) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#UniversallyUniqueIdentifier
(metadata-summary: line 2574) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSampleRef_ID
(metadata-summary: line 3199) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#TransmittanceRange_Transmittance
(metadata-summary: line 3264) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_ID
(metadata-summary: line 3274) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_Index
(metadata-summary: line 3279) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_PositionX
(metadata-summary: line 3284) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_PositionY
(metadata-summary: line 3289) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#WellSample_Timepoint
(metadata-summary: line 3219) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Color
(metadata-summary: line 3224) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Column
(metadata-summary: line 3229) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_ExternalDescription
(metadata-summary: line 3234) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_ExternalIdentifier
( about/index: line 38) ok https://www.openmicroscopy.org/citing-ome
(metadata-summary: line 3239) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_ID
(formats/ome-tiff: line 57) ok https://www.openmicroscopy.org/commercial-partners/#partnerships
(metadata-summary: line 3309) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#XMLAnnotation_Value
( about/index: line 72) ok https://www.openmicroscopy.org/omero/
( about/index: line 24) ok https://www.openmicroscopy.org/licensing
( about/index: line 56) ok https://www.openmicroscopy.org/support/
( about/whats-new: line 789) ok https://www.openmicroscopy.org/security/advisories/2021-SV4/
(metadata-summary: line 3249) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Row
(metadata-summary: line 3254) ok https://www.openmicroscopy.org/Schemas/Documentation/Generated/OME-2016-06/ome_xsd.html#Well_Type
(formats/princeton-instruments-spe: line 9) ok https://www.princetoninstruments.com
(formats/mias-maia-scientific: line 9) ok https://www.selectscience.net/supplier/maia-scientific/?compID=6088
(formats/gatan-digital-micrograph: line 56) ok https://www.sas.upenn.edu/~heiney/html-physics/datasqueeze/
(developers/logging: line 7) ok https://www.slf4j.org/manual.html#libraries
(formats/tecan-spark-cyto-workspace: line 10) ok https://www.tecan.com/
( formats/ecat7: line 9) redirect https://www.siemens.com/global/en/home.html - permanently to https://www.siemens.com/global/en.html
( formats/i2i: line 9) ok https://www.umassmed.edu/
( formats/seiko: line 10) redirect https://www.seiko.co.jp/en - permanently to https://www.seiko.co.jp:443/en/
( formats/gif: line 11) ok https://www.unisys.com/
(formats/zeiss-axiovision-zvi: line 9) redirect https://www.zeiss.com/microscopy - permanently to https://www.zeiss.com/microscopy/en/home.html
(formats/bio-rad-pic: line 11) redirect https://www.zeiss.com - permanently to https://www.zeiss.com/corporate/en/home.html
(formats/zeiss-axiovision-zvi: line 27) ok https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html
(formats/zeiss-axiovision-tiff: line 27) ok https://www.zeiss.com/microscopy/en/products/software/zeiss-zen-lite.html
(formats/pcx-pc-paintbrush: line 49) ok https://www.zeiss.com/microscopy/en/service-support/downloads.html
(formats/zeiss-czi: line 7) ok https://www.zeiss.com/microscopy/en/products/software/zeiss-zen/czi-image-file-format.html
(formats/zeiss-axiovision-zvi: line 67) ok https://www.zeiss.com/microscopy/en/service-support/support/discontinued-products.html
(developers/java-library: line 191) redirect https://www.unidata.ucar.edu/software/netcdf-java/v4.6/reference/httpservices.html - with Found to https://docs.unidata.ucar.edu/netcdf-java/4.6/userguide/index.html
(about/bug-reporting: line 64) ok https://zenodo.org/
(formats/cellvoyager: line 10) ok https://www.yokogawa.com/
( formats/mrc: line 11) ok https://www2.mrc-lmb.cam.ac.uk/
( formats/pcoraw: line 9) redirect https://www.pco.de/ - permanently to https://www.excelitas.com/product-category/pco?referer=pco
build finished with problems.
[[1;31mERROR[m] Command execution failed.
[1;31morg.apache.commons.exec.ExecuteException[m: [1;31mProcess exited with an error: 1 (Exit value: 1)[m
[1mat[m org.apache.commons.exec.DefaultExecutor.executeInternal ([1mDefaultExecutor.java:404[m)
[1mat[m org.apache.commons.exec.DefaultExecutor.execute ([1mDefaultExecutor.java:166[m)
[1mat[m org.codehaus.mojo.exec.ExecMojo.executeCommandLine ([1mExecMojo.java:804[m)
[1mat[m org.codehaus.mojo.exec.ExecMojo.executeCommandLine ([1mExecMojo.java:751[m)
[1mat[m org.codehaus.mojo.exec.ExecMojo.execute ([1mExecMojo.java:313[m)
[1mat[m org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo ([1mDefaultBuildPluginManager.java:137[m)
[1mat[m org.apache.maven.lifecycle.internal.MojoExecutor.execute ([1mMojoExecutor.java:210[m)
[1mat[m org.apache.maven.lifecycle.internal.MojoExecutor.execute ([1mMojoExecutor.java:156[m)
[1mat[m org.apache.maven.lifecycle.internal.MojoExecutor.execute ([1mMojoExecutor.java:148[m)
[1mat[m org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject ([1mLifecycleModuleBuilder.java:117[m)
[1mat[m org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject ([1mLifecycleModuleBuilder.java:81[m)
[1mat[m org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build ([1mSingleThreadedBuilder.java:56[m)
[1mat[m org.apache.maven.lifecycle.internal.LifecycleStarter.execute ([1mLifecycleStarter.java:128[m)
[1mat[m org.apache.maven.DefaultMaven.doExecute ([1mDefaultMaven.java:305[m)
[1mat[m org.apache.maven.DefaultMaven.doExecute ([1mDefaultMaven.java:192[m)
[1mat[m org.apache.maven.DefaultMaven.execute ([1mDefaultMaven.java:105[m)
[1mat[m org.apache.maven.cli.MavenCli.execute ([1mMavenCli.java:957[m)
[1mat[m org.apache.maven.cli.MavenCli.doMain ([1mMavenCli.java:289[m)
[1mat[m org.apache.maven.cli.MavenCli.main ([1mMavenCli.java:193[m)
[1mat[m jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 ([1mNative Method[m)
[1mat[m jdk.internal.reflect.NativeMethodAccessorImpl.invoke ([1mNativeMethodAccessorImpl.java:62[m)
[1mat[m jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke ([1mDelegatingMethodAccessorImpl.java:43[m)
[1mat[m java.lang.reflect.Method.invoke ([1mMethod.java:566[m)
[1mat[m org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced ([1mLauncher.java:282[m)
[1mat[m org.codehaus.plexus.classworlds.launcher.Launcher.launch ([1mLauncher.java:225[m)
[1mat[m org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode ([1mLauncher.java:406[m)
[1mat[m org.codehaus.plexus.classworlds.launcher.Launcher.main ([1mLauncher.java:347[m)
[[1;34mINFO[m] [1m------------------------------------------------------------------------[m
[[1;34mINFO[m] [1;31mBUILD FAILURE[m
[[1;34mINFO[m] [1m------------------------------------------------------------------------[m
[[1;34mINFO[m] Total time: 06:54 min
[[1;34mINFO[m] Finished at: 2024-06-04T01:25:21+01:00
[[1;34mINFO[m] [1m------------------------------------------------------------------------[m
[[1;31mERROR[m] Failed to execute goal [32morg.codehaus.mojo:exec-maven-plugin:1.6.0:exec[m [1m(sphinx-linkcheck)[m on project [36mbio-formats-documentation[m: [1;31mCommand execution failed.[m: Process exited with an error: 1 (Exit value: 1) -> [1m[Help 1][m
[[1;31mERROR[m]
[[1;31mERROR[m] To see the full stack trace of the errors, re-run Maven with the [1m-e[m switch.
[[1;31mERROR[m] Re-run Maven using the [1m-X[m switch to enable full debug logging.
[[1;31mERROR[m]
[[1;31mERROR[m] For more information about the errors and possible solutions, please read the following articles:
[[1;31mERROR[m] [1m[Help 1][m http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
Build step 'Execute shell' marked build as failure
Finished: FAILURE