Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 40d03203329d993b707c1830c07afe288356a5b0 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 40d03203329d993b707c1830c07afe288356a5b0 # timeout=10 Commit message: "Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe" > git rev-list --no-walk 40d03203329d993b707c1830c07afe288356a5b0 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 228 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-29 10:43:11,091 [ scc.config] DEBUG Found github.token 2024-10-29 10:43:11,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-29 10:43:11,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:43:11,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:43:12,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-29 10:43:12,056 [ scc.gh] DEBUG 4994 remaining from 5000 (Reset at 11:10 2024-10-29 10:43:12,057 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:12,061 [ scc.git] DEBUG Check current status 2024-10-29 10:43:12,061 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:12,064 [ scc.git] DEBUG 40d0320 Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe 2024-10-29 10:43:12,064 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:12,105 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-29 10:43:12,107 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-29 10:43:12,110 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-29 10:43:12,112 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-29 10:43:12,135 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-29 10:43:12,137 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-29 10:43:12,140 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-29 10:43:12,143 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-29 10:43:12,146 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-29 10:43:12,148 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-29 10:43:12,151 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-29 10:43:12,153 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-29 10:43:12,156 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-29 10:43:12,158 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-29 10:43:12,161 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-29 10:43:12,164 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-29 10:43:12,166 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-29 10:43:12,168 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-29 10:43:12,171 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-29 10:43:12,173 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-29 10:43:12,176 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-29 10:43:12,179 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-29 10:43:12,183 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:12,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-29 10:43:12,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:13,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:13,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:14,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:14,211 [ scc.git] DEBUG Resetting... 2024-10-29 10:43:14,212 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-29 10:43:14,220 [ scc.git] DEBUG HEAD is now at 40d0320 Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe 2024-10-29 10:43:14,220 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-29 10:43:14,308 [ scc.git] DEBUG Check current status 2024-10-29 10:43:14,309 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:14,312 [ scc.git] DEBUG 40d0320 Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe 2024-10-29 10:43:14,312 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:14,352 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-29 10:43:14,354 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-29 10:43:14,357 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-29 10:43:14,360 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-29 10:43:14,369 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-29 10:43:14,372 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-29 10:43:14,374 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-29 10:43:14,377 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-29 10:43:14,380 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-29 10:43:14,383 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-29 10:43:14,385 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-29 10:43:14,387 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-29 10:43:14,390 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-29 10:43:14,393 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-29 10:43:14,396 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-29 10:43:14,398 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-29 10:43:14,400 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-29 10:43:14,403 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-29 10:43:14,405 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-29 10:43:14,407 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-29 10:43:14,410 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-29 10:43:14,413 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-29 10:43:14,414 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-29 10:43:14,414 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-29 10:43:14,414 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-29 10:43:14,414 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-29 10:43:14,414 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-29 10:43:14,414 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:43:14,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-10-29 10:43:14,625 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:43:14,625 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:43:14,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:43:14,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:43:14,632 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:43:14,632 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:43:14,635 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:43:14,639 [ scc.git] DEBUG Already up to date. 2024-10-29 10:43:14,639 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:43:14,639 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:43:14,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:43:14,642 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:43:14,686 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:43:14,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:43:14,689 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:43:15,207 [ scc.git] DEBUG has no local changes 2024-10-29 10:43:15,207 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:43:15,272 [ scc.git] DEBUG [detached HEAD 7823ed1] merge master -Dorg -Snone 2024-10-29 10:43:15,272 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-29 10:43:15,272 [ scc.merge] INFO Already up to date. 2024-10-29 10:43:15,272 [ scc.merge] INFO 2024-10-29 10:43:15,272 [ scc.merge] INFO 2024-10-29 10:43:15,272 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-29 10:43:15,272 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-29 10:43:23,190 [ scc.config] DEBUG Found github.token 2024-10-29 10:43:23,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-29 10:43:23,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:43:23,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:43:24,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-29 10:43:24,147 [ scc.gh] DEBUG 4986 remaining from 5000 (Reset at 11:10 2024-10-29 10:43:24,147 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:24,151 [ scc.git] DEBUG Check current status 2024-10-29 10:43:24,151 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:24,154 [ scc.git] DEBUG 7823ed1 merge master -Dorg -Snone 2024-10-29 10:43:24,154 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:24,195 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-29 10:43:24,197 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-29 10:43:24,200 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-29 10:43:24,203 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-29 10:43:24,212 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-29 10:43:24,215 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-29 10:43:24,217 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-29 10:43:24,220 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-29 10:43:24,223 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-29 10:43:24,225 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-29 10:43:24,228 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-29 10:43:24,230 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-29 10:43:24,233 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-29 10:43:24,235 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-29 10:43:24,238 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-29 10:43:24,240 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-29 10:43:24,243 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-29 10:43:24,245 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-29 10:43:24,247 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-29 10:43:24,250 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-29 10:43:24,252 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-29 10:43:24,255 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-29 10:43:24,259 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:24,259 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-29 10:43:24,261 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-29 10:43:24,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-29 10:43:25,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:25,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:25,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:26,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:26,334 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:26,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-29 10:43:26,397 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:26,401 [ scc.git] DEBUG Check current status 2024-10-29 10:43:26,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:26,404 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-29 10:43:26,404 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:26,440 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:26,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-29 10:43:27,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:27,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:28,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:28,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:28,473 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:28,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:28,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-29 10:43:28,509 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:28,512 [ scc.git] DEBUG Check current status 2024-10-29 10:43:28,512 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:28,515 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-29 10:43:28,516 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:28,554 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:28,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-29 10:43:29,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:29,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:30,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:30,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:30,724 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:30,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:30,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-29 10:43:30,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:30,762 [ scc.git] DEBUG Check current status 2024-10-29 10:43:30,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:30,766 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-29 10:43:30,766 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:30,803 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:31,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-29 10:43:31,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:32,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:32,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:32,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:32,902 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:32,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:32,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-29 10:43:32,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:32,940 [ scc.git] DEBUG Check current status 2024-10-29 10:43:32,941 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:32,944 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-29 10:43:32,944 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:32,979 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:33,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-29 10:43:33,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:34,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:34,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:35,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:35,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:35,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:35,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-29 10:43:35,111 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:35,115 [ scc.git] DEBUG Check current status 2024-10-29 10:43:35,115 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:35,120 [ scc.git] DEBUG 24444fe6 Merge pull request #584 from Rdornier/link-url-to-image 2024-10-29 10:43:35,120 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:35,156 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:35,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-29 10:43:35,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:36,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:36,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:37,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:37,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:37,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:37,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-29 10:43:37,201 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:37,204 [ scc.git] DEBUG Check current status 2024-10-29 10:43:37,204 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:37,208 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-29 10:43:37,208 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:37,244 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:37,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-29 10:43:38,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:38,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:38,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:39,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:39,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:39,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:39,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-29 10:43:39,383 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:39,386 [ scc.git] DEBUG Check current status 2024-10-29 10:43:39,386 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:39,390 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-29 10:43:39,390 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:39,426 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:39,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-29 10:43:40,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:40,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:41,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:41,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:41,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:41,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:41,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-29 10:43:41,504 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:41,507 [ scc.git] DEBUG Check current status 2024-10-29 10:43:41,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:41,511 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-29 10:43:41,511 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:41,547 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:41,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-29 10:43:42,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:42,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:43,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:43,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:43,628 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:43,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:43,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-29 10:43:43,664 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:43,667 [ scc.git] DEBUG Check current status 2024-10-29 10:43:43,667 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:43,671 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-29 10:43:43,671 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:43,708 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:44,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-29 10:43:44,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:44,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:45,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:45,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:45,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:45,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:45,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-29 10:43:45,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:45,809 [ scc.git] DEBUG Check current status 2024-10-29 10:43:45,809 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:45,814 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-29 10:43:45,814 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:45,851 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:46,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-29 10:43:46,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:47,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:47,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:47,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:47,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:48,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:48,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-29 10:43:48,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:48,036 [ scc.git] DEBUG Check current status 2024-10-29 10:43:48,037 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:48,040 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-29 10:43:48,041 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:48,077 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:48,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-29 10:43:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:49,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:49,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:50,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:50,420 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:50,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:50,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-29 10:43:50,456 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:50,459 [ scc.git] DEBUG Check current status 2024-10-29 10:43:50,459 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:50,463 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-29 10:43:50,463 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:50,499 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:50,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-29 10:43:51,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:51,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:52,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:52,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:52,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:52,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:52,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-29 10:43:52,576 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:52,580 [ scc.git] DEBUG Check current status 2024-10-29 10:43:52,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:52,584 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-29 10:43:52,584 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:52,621 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:53,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-29 10:43:53,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:53,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:54,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:54,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:54,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:54,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:54,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-29 10:43:54,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:54,758 [ scc.git] DEBUG Check current status 2024-10-29 10:43:54,759 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:54,763 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-29 10:43:54,763 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:54,800 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:55,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-29 10:43:55,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:56,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:56,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:56,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:56,925 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:56,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:56,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-29 10:43:56,960 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:56,964 [ scc.git] DEBUG Check current status 2024-10-29 10:43:56,964 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:56,968 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-29 10:43:56,968 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:57,005 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:57,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-29 10:43:57,320 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-29 10:43:57,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-29 10:43:58,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:43:58,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:43:58,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:43:59,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:43:59,254 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:43:59,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:43:59,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-29 10:43:59,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:43:59,295 [ scc.git] DEBUG Check current status 2024-10-29 10:43:59,295 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:43:59,299 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-29 10:43:59,299 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:43:59,338 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:43:59,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-29 10:44:00,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:00,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:00,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:01,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:01,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:01,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:01,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-29 10:44:01,402 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:44:01,406 [ scc.git] DEBUG Check current status 2024-10-29 10:44:01,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:01,410 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-29 10:44:01,410 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:01,447 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:44:01,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-29 10:44:02,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:02,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:03,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:03,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:03,518 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:03,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:03,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-29 10:44:03,555 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:44:03,559 [ scc.git] DEBUG Check current status 2024-10-29 10:44:03,559 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:03,563 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-29 10:44:03,563 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:03,600 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:44:03,601 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-29 10:44:03,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-29 10:44:04,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:04,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:05,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:05,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:05,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:05,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:05,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-29 10:44:05,799 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:44:05,803 [ scc.git] DEBUG Check current status 2024-10-29 10:44:05,803 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:05,808 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-29 10:44:05,808 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:05,845 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:44:06,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-29 10:44:06,161 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-29 10:44:06,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-29 10:44:06,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:07,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:07,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:08,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:08,069 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:08,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:08,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-29 10:44:08,107 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:44:08,112 [ scc.git] DEBUG Check current status 2024-10-29 10:44:08,112 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:08,116 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-29 10:44:08,116 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:08,154 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:44:08,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-29 10:44:08,475 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-29 10:44:08,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-29 10:44:09,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:09,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:10,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:10,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:10,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:10,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:10,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-29 10:44:10,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:44:10,532 [ scc.git] DEBUG Check current status 2024-10-29 10:44:10,533 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:10,537 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-29 10:44:10,537 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:10,575 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:44:10,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-29 10:44:11,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:11,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:12,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:12,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:12,594 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:12,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:12,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-29 10:44:12,631 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-29 10:44:12,635 [ scc.git] DEBUG Check current status 2024-10-29 10:44:12,635 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:12,640 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-29 10:44:12,640 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:12,677 [ scc.config] DEBUG Found remote.origin.url 2024-10-29 10:44:12,678 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-29 10:44:13,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-29 10:44:13,021 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-29 10:44:13,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-29 10:44:13,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-29 10:44:14,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-29 10:44:14,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:15,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-29 10:44:15,020 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:15,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:15,055 [ scc.git] DEBUG Resetting... 2024-10-29 10:44:15,055 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-29 10:44:15,064 [ scc.git] DEBUG HEAD is now at 7823ed1 merge master -Dorg -Snone 2024-10-29 10:44:15,064 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-29 10:44:15,152 [ scc.git] DEBUG Check current status 2024-10-29 10:44:15,153 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-29 10:44:15,157 [ scc.git] DEBUG 7823ed1 merge master -Dorg -Snone 2024-10-29 10:44:15,157 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-29 10:44:15,198 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-29 10:44:15,200 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-29 10:44:15,203 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-29 10:44:15,205 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-29 10:44:15,215 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-29 10:44:15,218 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-29 10:44:15,220 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-29 10:44:15,223 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-29 10:44:15,226 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-29 10:44:15,228 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-29 10:44:15,231 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-29 10:44:15,233 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-29 10:44:15,236 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-29 10:44:15,238 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-29 10:44:15,241 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-29 10:44:15,244 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-29 10:44:15,246 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-29 10:44:15,248 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-29 10:44:15,250 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-29 10:44:15,253 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-29 10:44:15,255 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-29 10:44:15,258 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-29 10:44:15,259 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-29 10:44:15,259 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-29 10:44:15,259 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-29 10:44:15,259 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-29 10:44:15,259 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-29 10:44:15,260 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-29 10:44:15,260 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:44:15,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-10-29 10:44:15,445 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:44:15,445 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:15,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:15,450 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:44:15,454 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:44:15,454 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:44:15,459 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:44:15,463 [ scc.git] DEBUG Already up to date. 2024-10-29 10:44:15,463 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:44:15,464 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:15,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:15,468 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:44:15,515 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:15,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:15,519 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:44:16,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-29 10:44:16,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-29 10:44:17,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-29 10:44:17,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:17,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:18,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-29 10:44:18,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:18,915 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-29 10:44:18,915 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:44:18,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-29 10:44:18,915 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:18,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:18,921 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:44:18,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:44:18,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:44:18,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:44:18,934 [ scc.git] DEBUG Already up to date. 2024-10-29 10:44:18,935 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-29 10:44:19,249 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-29 10:44:19,250 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-29 10:44:19,253 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:44:19,253 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:19,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:19,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-29 10:44:19,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:19,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-29 10:44:19,275 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:44:19,278 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-29 10:44:19,278 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-29 10:44:19,278 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-29 10:44:19,278 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-29 10:44:19,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:44:19,422 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:44:19,456 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:19,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:19,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:19,494 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:44:19,499 [ scc.git] DEBUG has no local changes 2024-10-29 10:44:19,499 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:44:19,506 [ scc.git] DEBUG [detached HEAD 156a248] merge master -Dorg -Ssuccess-only 2024-10-29 10:44:19,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:19,507 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:44:19,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-29 10:44:20,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-29 10:44:20,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-29 10:44:21,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-29 10:44:21,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:22,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:22,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-29 10:44:23,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:23,217 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-29 10:44:23,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-29 10:44:24,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-29 10:44:24,293 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:44:24,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-29 10:44:24,293 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:24,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:24,299 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:44:24,303 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:44:24,303 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:44:24,308 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:44:24,313 [ scc.git] DEBUG Already up to date. 2024-10-29 10:44:24,313 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-29 10:44:24,635 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-29 10:44:24,635 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-29 10:44:24,638 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:44:24,639 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:24,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:24,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-29 10:44:24,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:24,652 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-29 10:44:24,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:44:24,663 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-29 10:44:24,663 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-29 10:44:24,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:44:24,801 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:44:24,835 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:24,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:24,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:24,873 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:44:24,878 [ scc.git] DEBUG has no local changes 2024-10-29 10:44:24,878 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:44:24,886 [ scc.git] DEBUG [detached HEAD 372c2f4] merge master -Dorg -Ssuccess-only 2024-10-29 10:44:24,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:24,886 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:44:25,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-29 10:44:25,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-29 10:44:26,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-29 10:44:26,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-29 10:44:27,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-29 10:44:27,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-29 10:44:28,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:28,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-29 10:44:29,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:29,131 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-29 10:44:29,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-29 10:44:30,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-29 10:44:30,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-29 10:44:30,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-29 10:44:31,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-29 10:44:31,425 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:44:31,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-29 10:44:31,425 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:31,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:31,431 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:44:31,435 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:44:31,435 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:44:31,440 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:44:31,445 [ scc.git] DEBUG Already up to date. 2024-10-29 10:44:31,445 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-29 10:44:31,736 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-29 10:44:31,736 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-29 10:44:31,739 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:44:31,739 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:31,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:31,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-29 10:44:31,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:31,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-29 10:44:31,762 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-29 10:44:31,763 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:44:31,765 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-29 10:44:31,765 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-29 10:44:31,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:44:31,902 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:44:31,936 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:31,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:31,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:31,974 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:44:31,979 [ scc.git] DEBUG has no local changes 2024-10-29 10:44:31,979 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:44:31,987 [ scc.git] DEBUG [detached HEAD 7887439] merge master -Dorg -Ssuccess-only 2024-10-29 10:44:31,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:31,988 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:44:32,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-29 10:44:32,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-29 10:44:33,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-29 10:44:33,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-29 10:44:34,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-29 10:44:34,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:35,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:35,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-29 10:44:36,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:36,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-29 10:44:37,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-29 10:44:37,018 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-29 10:44:37,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-29 10:44:38,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-29 10:44:38,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-29 10:44:39,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-29 10:44:39,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:39,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-29 10:44:40,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:40,280 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-29 10:44:40,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-29 10:44:41,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-29 10:44:41,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-29 10:44:42,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:42,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-29 10:44:43,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:43,131 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-29 10:44:43,131 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:44:43,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-29 10:44:43,132 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:43,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:43,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:44:43,142 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:44:43,142 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:44:43,146 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:44:43,151 [ scc.git] DEBUG Already up to date. 2024-10-29 10:44:43,151 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-29 10:44:43,759 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-29 10:44:43,759 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-29 10:44:43,762 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-29 10:44:44,252 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-29 10:44:44,252 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-29 10:44:44,255 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-29 10:44:44,570 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-29 10:44:44,570 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-29 10:44:44,573 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:44:44,573 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:44,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:44,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-29 10:44:44,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:44,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-29 10:44:44,599 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-29 10:44:44,599 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-29 10:44:44,599 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-29 10:44:44,599 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:44:44,600 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:44:44,604 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-29 10:44:44,610 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-29 10:44:44,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:44:44,739 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-29 10:44:44,745 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-29 10:44:44,750 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-29 10:44:44,754 [ scc.config] DEBUG Found github.token 2024-10-29 10:44:44,754 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-29 10:44:44,755 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-29 10:44:44,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:44,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-29 10:44:44,776 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-29 10:44:44,776 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-29 10:44:44,776 [ scc.git] DEBUG Auto-merging setup.py 2024-10-29 10:44:44,776 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-29 10:44:44,776 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-29 10:44:44,776 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-29 10:44:44,776 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-29 10:44:44,776 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:44:44,776 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:44:44,781 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-29 10:44:44,786 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-29 10:44:45,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:44:45,129 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-29 10:44:45,135 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-29 10:44:45,139 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-29 10:44:45,144 [ scc.config] DEBUG Found github.token 2024-10-29 10:44:45,144 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-29 10:44:45,144 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-29 10:44:45,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:45,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-29 10:44:45,164 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-29 10:44:45,164 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-29 10:44:45,165 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:44:45,167 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-29 10:44:45,167 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-29 10:44:45,167 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-29 10:44:45,167 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-29 10:44:45,167 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-29 10:44:45,168 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-29 10:44:45,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:44:45,521 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:44:45,555 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:44:45,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:44:45,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:44:45,593 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:44:45,599 [ scc.git] DEBUG has no local changes 2024-10-29 10:44:45,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:44:45,606 [ scc.git] DEBUG [detached HEAD db35c36] merge master -Dorg -Ssuccess-only 2024-10-29 10:44:45,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:44:45,607 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:44:46,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-29 10:44:46,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599 HTTP/1.1" 200 None 2024-10-29 10:44:47,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599/comments HTTP/1.1" 200 None 2024-10-29 10:44:47,039 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:44:47,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157 HTTP/1.1" 200 None 2024-10-29 10:44:48,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:48,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:48,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-29 10:44:48,960 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:44:49,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-29 10:44:50,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:50,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:50,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-29 10:44:51,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3c170054f782fb9ac230c740c32dceac9e50c618?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:51,286 [ scc.repo] DEBUG - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-29 10:44:51,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-29 10:44:52,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-29 10:44:52,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-29 10:44:53,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-29 10:44:53,126 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:44:53,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce HTTP/1.1" 200 None 2024-10-29 10:44:54,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:54,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:55,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce HTTP/1.1" 200 None 2024-10-29 10:44:55,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:55,553 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-29 10:44:55,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-29 10:44:56,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-29 10:44:56,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-29 10:44:57,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:44:57,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:44:58,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-29 10:44:58,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:44:58,733 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-29 10:44:59,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-29 10:44:59,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-29 10:44:59,653 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:45:00,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-10-29 10:45:00,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:01,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:01,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-10-29 10:45:02,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/339e655bba6f9b7283bd907272429ead97e7ca5d?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:02,045 [ scc.repo] DEBUG - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-10-29 10:45:02,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-29 10:45:03,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-29 10:45:03,093 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:45:03,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a HTTP/1.1" 200 None 2024-10-29 10:45:04,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:04,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a HTTP/1.1" 200 None 2024-10-29 10:45:05,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/79a706d9a7483d812f712ccb3e801e777214f31a?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:05,433 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-29 10:45:05,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-29 10:45:06,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-29 10:45:06,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-29 10:45:06,983 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:45:07,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5 HTTP/1.1" 200 None 2024-10-29 10:45:08,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:08,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:09,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5 HTTP/1.1" 200 None 2024-10-29 10:45:09,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c03b8714a73d425a3ada3eba2dd301bb281628f5?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:09,534 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-29 10:45:09,535 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:45:09,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-29 10:45:09,535 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:09,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:09,541 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:45:09,546 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:45:09,546 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:45:09,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:45:09,557 [ scc.git] DEBUG Already up to date. 2024-10-29 10:45:09,557 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-29 10:45:10,193 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-29 10:45:10,194 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-29 10:45:10,198 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-29 10:45:10,507 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-29 10:45:10,507 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-29 10:45:10,511 [ scc.git] DEBUG Calling 'git fetch origin pull/591/head' 2024-10-29 10:45:10,825 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-29 10:45:10,825 [ scc.git] DEBUG * branch refs/pull/591/head -> FETCH_HEAD 2024-10-29 10:45:10,829 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-29 10:45:11,115 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-29 10:45:11,115 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-29 10:45:11,119 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-29 10:45:11,401 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-29 10:45:11,401 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-29 10:45:11,405 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-10-29 10:45:11,684 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-29 10:45:11,684 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-10-29 10:45:11,688 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:45:11,688 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:11,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:11,693 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c03b8714a73d425a3ada3eba2dd301bb281628f5' 2024-10-29 10:45:11,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:11,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) c03b8714a73d425a3ada3eba2dd301bb281628f5' 2024-10-29 10:45:11,720 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:11,726 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-29 10:45:11,726 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-29 10:45:11,726 [ scc.git] DEBUG 10 files changed, 314 insertions(+), 17 deletions(-) 2024-10-29 10:45:11,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:11,888 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...79a706d9a7483d812f712ccb3e801e777214f31a' 2024-10-29 10:45:11,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:11,900 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 79a706d9a7483d812f712ccb3e801e777214f31a' 2024-10-29 10:45:12,093 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-29 10:45:12,093 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-29 10:45:12,093 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-29 10:45:12,094 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:12,099 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-29 10:45:12,099 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-29 10:45:12,099 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-29 10:45:12,099 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-29 10:45:12,100 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-29 10:45:12,100 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-29 10:45:12,100 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-29 10:45:12,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:12,273 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-10-29 10:45:12,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:12,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Add Horizontal and Vertical Image Flipping Functionality) 339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-10-29 10:45:12,645 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-29 10:45:12,645 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-29 10:45:12,646 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-29 10:45:12,646 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-29 10:45:12,646 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-29 10:45:12,646 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-29 10:45:12,646 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:12,652 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 71 +++++++++++++++++++- 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/css/figure.css | 14 ++++ 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/index.html | 1 + 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/js/models/panel_model.js | 9 ++- 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/js/views/panel_view.js | 4 +- 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/js/views/right_panel_view.js | 75 +++++++++++++++++++++- 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 10 +-- 2024-10-29 10:45:12,653 [ scc.git] DEBUG src/templates/image_display_options.template.html | 11 +++- 2024-10-29 10:45:12,653 [ scc.git] DEBUG 8 files changed, 178 insertions(+), 17 deletions(-) 2024-10-29 10:45:12,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:12,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-29 10:45:12,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:12,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-29 10:45:12,830 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:12,833 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-29 10:45:12,833 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-29 10:45:13,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:13,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-10-29 10:45:13,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:13,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-10-29 10:45:13,488 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-29 10:45:13,488 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-29 10:45:13,488 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-29 10:45:13,488 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-29 10:45:13,488 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2024-10-29 10:45:13,488 [ scc.git] DEBUG Auto-merging src/templates/image_display_options.template.html 2024-10-29 10:45:13,488 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/image_display_options.template.html 2024-10-29 10:45:13,488 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:45:13,488 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:45:13,495 [ scc.git] DEBUG Calling 'git reset --hard 95b4cf7001a8a8c0d406dc56ed7b8b90dc5fcc02' 2024-10-29 10:45:13,504 [ scc.git] DEBUG HEAD is now at 95b4cf70 merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 2024-10-29 10:45:13,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:13,654 [ scc.git] DEBUG Calling 'git merge-base 24444fe6bf35af27230c28e466f9819b08853118 d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-10-29 10:45:13,660 [ scc.git] DEBUG Calling 'git diff --name-only 24444fe6bf35af27230c28e466f9819b08853118..24444fe6bf35af27230c28e466f9819b08853118' 2024-10-29 10:45:13,665 [ scc.git] INFO - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - PR #578 Rdornier 'Image outline' - src/js/views/right_panel_view.js - PR #591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - src/templates/image_display_options.template.html - src/js/views/right_panel_view.js --conflicts 2024-10-29 10:45:13,670 [ scc.config] DEBUG Found github.token 2024-10-29 10:45:13,670 [ scc.git] DEBUG Adding comment to issue #595. 2024-10-29 10:45:14,423 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 201 2193 2024-10-29 10:45:14,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-29 10:45:14,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:14,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Query timestamps from all planes when C or Z dimensions are not filled) 3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-29 10:45:14,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:14,638 [ scc.git] DEBUG omero_figure/omeroutils.py | 25 +++++++++++++++++++++++++ 2024-10-29 10:45:14,638 [ scc.git] DEBUG 1 file changed, 25 insertions(+) 2024-10-29 10:45:14,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:14,808 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:45:14,844 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:14,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:14,848 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:45:14,884 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:45:14,891 [ scc.git] DEBUG has no local changes 2024-10-29 10:45:14,891 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' (status: None) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:45:14,901 [ scc.git] DEBUG [detached HEAD 0ee66e8f] merge master -Dorg -Ssuccess-only 2024-10-29 10:45:14,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:45:14,902 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:45:15,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-29 10:45:15,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-29 10:45:16,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-29 10:45:16,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-29 10:45:17,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:17,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-29 10:45:18,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:18,217 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-29 10:45:18,217 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:45:18,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-29 10:45:18,217 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:18,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:18,223 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:45:18,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:45:18,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:45:18,232 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:45:18,237 [ scc.git] DEBUG Already up to date. 2024-10-29 10:45:18,237 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-29 10:45:18,568 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-29 10:45:18,568 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-29 10:45:18,571 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:45:18,571 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:18,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:18,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-29 10:45:18,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:18,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-29 10:45:18,604 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-29 10:45:18,605 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:18,607 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-29 10:45:18,607 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-29 10:45:18,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:18,749 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:45:18,784 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:18,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:18,789 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:45:18,823 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:45:18,829 [ scc.git] DEBUG has no local changes 2024-10-29 10:45:18,829 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:45:18,836 [ scc.git] DEBUG [detached HEAD 74cf30f] merge master -Dorg -Ssuccess-only 2024-10-29 10:45:18,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:45:18,837 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:45:19,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-29 10:45:19,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-29 10:45:19,725 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:45:20,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-29 10:45:20,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:21,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-29 10:45:21,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:21,828 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-29 10:45:21,828 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:45:21,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-29 10:45:21,828 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:21,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:21,834 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:45:21,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:45:21,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:45:21,843 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:45:21,848 [ scc.git] DEBUG Already up to date. 2024-10-29 10:45:21,848 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-29 10:45:22,168 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-29 10:45:22,169 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-29 10:45:22,172 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:45:22,172 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:22,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:22,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-29 10:45:22,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:22,186 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-29 10:45:22,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:22,199 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-29 10:45:22,199 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-29 10:45:22,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:22,364 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:45:22,398 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:22,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:22,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:45:22,436 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:45:22,443 [ scc.git] DEBUG has no local changes 2024-10-29 10:45:22,443 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:45:22,451 [ scc.git] DEBUG [detached HEAD e246486] merge master -Dorg -Ssuccess-only 2024-10-29 10:45:22,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:45:22,452 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:45:22,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-29 10:45:23,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488 HTTP/1.1" 200 None 2024-10-29 10:45:23,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 200 None 2024-10-29 10:45:24,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427 HTTP/1.1" 200 None 2024-10-29 10:45:24,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:25,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:25,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427 HTTP/1.1" 200 None 2024-10-29 10:45:26,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/767995856fdb93be4060423195f3f604aa6e4427?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:26,246 [ scc.repo] DEBUG - PR 488 will-moore 'Mobile layout' 2024-10-29 10:45:26,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-29 10:45:27,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-29 10:45:27,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-29 10:45:28,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-29 10:45:28,200 [ scc.repo] DEBUG # ... Include label: include 2024-10-29 10:45:28,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-29 10:45:29,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:29,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:30,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-29 10:45:30,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:30,617 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-29 10:45:31,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-29 10:45:31,090 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:45:31,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-29 10:45:32,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:32,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:33,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-29 10:45:33,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:33,630 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-29 10:45:34,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-29 10:45:34,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-29 10:45:35,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-29 10:45:35,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:35,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:36,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-29 10:45:36,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:36,863 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-29 10:45:37,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-29 10:45:37,321 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:45:37,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-29 10:45:38,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:38,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:39,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-29 10:45:39,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:39,729 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-29 10:45:40,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-29 10:45:40,168 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:45:40,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-29 10:45:41,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:41,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:42,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-29 10:45:42,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:42,880 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-29 10:45:43,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-29 10:45:43,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-29 10:45:44,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-29 10:45:44,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:45,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:45,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-29 10:45:46,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:46,171 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-29 10:45:46,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-29 10:45:47,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-29 10:45:47,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-29 10:45:48,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:48,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:45:49,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-29 10:45:49,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:49,629 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-29 10:45:50,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-29 10:45:50,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-29 10:45:51,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-29 10:45:51,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:45:52,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-29 10:45:52,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:45:52,418 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-29 10:45:52,418 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:45:52,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-29 10:45:52,419 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:52,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:52,424 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:45:52,429 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:45:52,429 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:45:52,434 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:45:52,439 [ scc.git] DEBUG Already up to date. 2024-10-29 10:45:52,439 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-29 10:45:53,161 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:53,162 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-29 10:45:53,165 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-29 10:45:54,764 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:54,764 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-29 10:45:54,768 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-29 10:45:55,187 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:55,187 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-29 10:45:55,190 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-29 10:45:55,473 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:55,473 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-29 10:45:55,477 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-29 10:45:55,756 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:55,757 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-29 10:45:55,760 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-29 10:45:56,331 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:56,331 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-29 10:45:56,334 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-29 10:45:56,616 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:56,616 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-29 10:45:56,620 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-29 10:45:57,749 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:57,749 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-29 10:45:57,753 [ scc.git] DEBUG Calling 'git fetch origin pull/488/head' 2024-10-29 10:45:58,318 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-29 10:45:58,319 [ scc.git] DEBUG * branch refs/pull/488/head -> FETCH_HEAD 2024-10-29 10:45:58,322 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:45:58,322 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:45:58,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:58,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-29 10:45:58,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:58,337 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-29 10:45:58,500 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-29 10:45:58,500 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:58,503 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-29 10:45:58,503 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-29 10:45:58,503 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-29 10:45:58,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:58,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-29 10:45:58,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:58,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-29 10:45:58,672 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-29 10:45:58,672 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-29 10:45:58,672 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-29 10:45:58,672 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-29 10:45:58,673 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:58,676 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-29 10:45:58,676 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-29 10:45:58,676 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-29 10:45:58,676 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-29 10:45:58,676 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-29 10:45:58,676 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-29 10:45:58,676 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-29 10:45:58,676 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-29 10:45:59,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:59,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-29 10:45:59,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:59,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-29 10:45:59,100 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-29 10:45:59,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:59,103 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-29 10:45:59,103 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-29 10:45:59,103 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-29 10:45:59,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:59,409 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-29 10:45:59,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:59,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-29 10:45:59,468 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:45:59,477 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-29 10:45:59,477 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-29 10:45:59,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:45:59,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-29 10:45:59,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:45:59,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-29 10:45:59,841 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-29 10:45:59,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:00,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:00,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-29 10:46:00,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:00,193 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-29 10:46:00,527 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-29 10:46:00,527 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-29 10:46:00,527 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-29 10:46:00,527 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:00,531 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-29 10:46:00,531 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-29 10:46:00,531 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-29 10:46:00,531 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-29 10:46:00,531 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-29 10:46:00,531 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-29 10:46:00,531 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-29 10:46:00,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:00,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-29 10:46:00,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:00,681 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-29 10:46:00,775 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-29 10:46:00,776 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:00,785 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-29 10:46:00,785 [ scc.git] DEBUG package.json | 2 +- 2024-10-29 10:46:00,785 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-29 10:46:01,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:01,059 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-29 10:46:01,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:01,070 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-29 10:46:01,085 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:01,088 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-29 10:46:01,088 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-29 10:46:01,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:01,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767995856fdb93be4060423195f3f604aa6e4427' 2024-10-29 10:46:01,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:01,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 488 (Mobile layout) 767995856fdb93be4060423195f3f604aa6e4427' 2024-10-29 10:46:01,564 [ scc.git] DEBUG Auto-merging src/utils/ui.js 2024-10-29 10:46:01,564 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/utils/ui.js 2024-10-29 10:46:01,564 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:46:01,565 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:46:01,570 [ scc.git] DEBUG Calling 'git reset --hard 6dbaffba2ce9467e0cf38dac5baba0f5c1f52c76' 2024-10-29 10:46:01,577 [ scc.git] DEBUG HEAD is now at 6dbaffb merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 2024-10-29 10:46:01,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:01,821 [ scc.git] DEBUG Calling 'git merge-base a8f380fabfd839b946e5a5f613f1fce07abb3815 767995856fdb93be4060423195f3f604aa6e4427' 2024-10-29 10:46:01,825 [ scc.git] DEBUG Calling 'git diff --name-only a8f380fabfd839b946e5a5f613f1fce07abb3815..a8f380fabfd839b946e5a5f613f1fce07abb3815' 2024-10-29 10:46:01,830 [ scc.git] INFO - PR 488 will-moore 'Mobile layout' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - PR #482 will-moore 'Support ?collapse_left/right and ?full_page=true' - src/utils/ui.js --conflicts 2024-10-29 10:46:01,835 [ scc.config] DEBUG Found github.token 2024-10-29 10:46:01,835 [ scc.git] DEBUG Adding comment to issue #488. 2024-10-29 10:46:02,891 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 201 2037 2024-10-29 10:46:02,892 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:02,927 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:02,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:02,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:02,968 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:02,975 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:02,975 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Conflicting PRs (not included): - PR 488 will-moore 'Mobile layout' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:02,982 [ scc.git] DEBUG [detached HEAD e6ef4a6] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:02,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:02,983 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:03,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-29 10:46:03,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/88 HTTP/1.1" 200 None 2024-10-29 10:46:04,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/88/comments HTTP/1.1" 200 None 2024-10-29 10:46:04,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/b58b599ed5b65135cc4d7bac0382b6944579eb6f HTTP/1.1" 200 None 2024-10-29 10:46:05,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/b58b599ed5b65135cc4d7bac0382b6944579eb6f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:05,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/b58b599ed5b65135cc4d7bac0382b6944579eb6f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:46:06,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/b58b599ed5b65135cc4d7bac0382b6944579eb6f HTTP/1.1" 200 None 2024-10-29 10:46:06,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/b58b599ed5b65135cc4d7bac0382b6944579eb6f?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:06,746 [ scc.repo] DEBUG - PR 88 pwalczysko 'Fix build jinja2' 2024-10-29 10:46:07,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/87 HTTP/1.1" 200 None 2024-10-29 10:46:07,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/87/comments HTTP/1.1" 200 None 2024-10-29 10:46:08,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c9642f31154cd66dd416599d485409543b18618a HTTP/1.1" 200 None 2024-10-29 10:46:08,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c9642f31154cd66dd416599d485409543b18618a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:09,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c9642f31154cd66dd416599d485409543b18618a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:46:09,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-29 10:46:10,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-29 10:46:10,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-29 10:46:10,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:11,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:46:11,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-29 10:46:12,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-29 10:46:12,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-29 10:46:13,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:13,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-29 10:46:14,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:14,133 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-29 10:46:14,133 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:14,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-29 10:46:14,133 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:14,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:14,139 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:14,143 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:14,143 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:14,148 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:14,153 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:14,153 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-29 10:46:14,463 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-29 10:46:14,463 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-29 10:46:14,467 [ scc.git] DEBUG Calling 'git fetch origin pull/88/head' 2024-10-29 10:46:14,901 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-29 10:46:14,901 [ scc.git] DEBUG * branch refs/pull/88/head -> FETCH_HEAD 2024-10-29 10:46:14,905 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:14,905 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:14,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:14,910 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-29 10:46:14,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:14,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-29 10:46:14,929 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:14,932 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-29 10:46:14,932 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-29 10:46:14,932 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-29 10:46:14,932 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-29 10:46:14,932 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-29 10:46:14,932 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-29 10:46:15,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:15,068 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b58b599ed5b65135cc4d7bac0382b6944579eb6f' 2024-10-29 10:46:15,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:15,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 88 (Fix build jinja2) b58b599ed5b65135cc4d7bac0382b6944579eb6f' 2024-10-29 10:46:15,104 [ scc.git] DEBUG Auto-merging requirements.txt 2024-10-29 10:46:15,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in requirements.txt 2024-10-29 10:46:15,104 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:46:15,105 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:46:15,109 [ scc.git] DEBUG Calling 'git reset --hard f0ff871b000ae8c11bc80018abac741e1efc91b1' 2024-10-29 10:46:15,115 [ scc.git] DEBUG HEAD is now at f0ff871 merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 2024-10-29 10:46:15,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:15,503 [ scc.git] DEBUG Calling 'git merge-base 9631b155c44fcec9986b03315dd9f5c5c64aa7eb b58b599ed5b65135cc4d7bac0382b6944579eb6f' 2024-10-29 10:46:15,507 [ scc.git] DEBUG Calling 'git diff --name-only 9631b155c44fcec9986b03315dd9f5c5c64aa7eb..9631b155c44fcec9986b03315dd9f5c5c64aa7eb' 2024-10-29 10:46:15,512 [ scc.git] INFO - PR 88 pwalczysko 'Fix build jinja2' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - PR #74 will-moore 'mapr extension of webclient' - requirements.txt --conflicts 2024-10-29 10:46:15,516 [ scc.config] DEBUG Found github.token 2024-10-29 10:46:15,516 [ scc.git] DEBUG Adding comment to issue #88. 2024-10-29 10:46:16,269 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-mapr/issues/88/comments HTTP/1.1" 201 2002 2024-10-29 10:46:16,270 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:16,305 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:16,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:16,309 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:16,343 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:16,349 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:16,349 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 87 will-moore 'Tests dont use omero utils' (status: failure) - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Conflicting PRs (not included): - PR 88 pwalczysko 'Fix build jinja2' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:16,356 [ scc.git] DEBUG [detached HEAD d91e0b8] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:16,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:16,357 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:16,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-29 10:46:17,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-29 10:46:17,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-29 10:46:18,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-29 10:46:18,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:19,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-29 10:46:19,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:19,720 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-29 10:46:20,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-29 10:46:20,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-29 10:46:21,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-29 10:46:21,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:22,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-29 10:46:22,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:22,547 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-29 10:46:22,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-29 10:46:23,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-29 10:46:23,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-29 10:46:24,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:25,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-29 10:46:25,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:25,480 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-29 10:46:25,480 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:25,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-29 10:46:25,480 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:25,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:25,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:25,490 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:25,490 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:25,494 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:25,499 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:25,500 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-29 10:46:25,808 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-29 10:46:25,808 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-29 10:46:25,812 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-29 10:46:26,105 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-29 10:46:26,105 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-29 10:46:26,109 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-29 10:46:26,389 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-29 10:46:26,389 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-29 10:46:26,392 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:26,393 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:26,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:26,397 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-29 10:46:26,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:26,407 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-29 10:46:26,420 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-29 10:46:26,420 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-29 10:46:26,420 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-29 10:46:26,420 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-29 10:46:26,420 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:46:26,421 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:46:26,426 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-29 10:46:26,433 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-29 10:46:26,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:26,595 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-29 10:46:26,601 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-29 10:46:26,606 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-29 10:46:26,610 [ scc.config] DEBUG Found github.token 2024-10-29 10:46:26,610 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-29 10:46:26,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-29 10:46:26,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:26,621 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-29 10:46:26,636 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-29 10:46:26,636 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-29 10:46:26,636 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-29 10:46:26,636 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:46:26,636 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:46:26,641 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-29 10:46:26,648 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-29 10:46:26,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:26,978 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-29 10:46:26,984 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-29 10:46:26,989 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-29 10:46:26,993 [ scc.config] DEBUG Found github.token 2024-10-29 10:46:26,993 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-29 10:46:26,993 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-29 10:46:26,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:27,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-29 10:46:27,012 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:27,015 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-29 10:46:27,015 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-29 10:46:27,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:27,367 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:27,402 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:27,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:27,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:27,440 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:27,445 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:27,446 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:27,453 [ scc.git] DEBUG [detached HEAD 56c6366] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:27,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:27,454 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:27,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-29 10:46:28,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-29 10:46:28,385 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:46:29,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-29 10:46:29,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:30,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:46:30,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-29 10:46:31,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:31,069 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-29 10:46:31,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-29 10:46:31,524 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:46:32,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-29 10:46:32,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:33,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:46:33,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-29 10:46:34,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:34,049 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-29 10:46:34,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-29 10:46:34,519 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-29 10:46:35,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-29 10:46:35,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:36,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:46:36,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-29 10:46:37,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:37,116 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-29 10:46:37,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-29 10:46:38,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-29 10:46:38,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-29 10:46:38,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-29 10:46:39,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-29 10:46:39,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-29 10:46:39,872 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:39,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-29 10:46:39,872 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:39,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:39,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:39,883 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:39,883 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:39,888 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:39,893 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:39,893 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-29 10:46:40,206 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-29 10:46:40,206 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-29 10:46:40,210 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-29 10:46:40,508 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-29 10:46:40,508 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-29 10:46:40,512 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-29 10:46:40,793 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-29 10:46:40,793 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-29 10:46:40,797 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:40,797 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:40,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:40,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-29 10:46:40,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:40,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-29 10:46:40,820 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:40,822 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-29 10:46:40,822 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-29 10:46:40,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:40,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-29 10:46:40,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:40,972 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-29 10:46:40,999 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-29 10:46:41,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:41,003 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-29 10:46:41,003 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-29 10:46:41,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:41,350 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-29 10:46:41,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:41,359 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-29 10:46:41,428 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-29 10:46:41,429 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:41,432 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-29 10:46:41,432 [ scc.git] DEBUG package.json | 2 +- 2024-10-29 10:46:41,432 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-29 10:46:41,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:41,796 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:41,831 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:41,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:41,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:41,869 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:41,875 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:41,875 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:41,883 [ scc.git] DEBUG [detached HEAD 76fd246] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:41,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:41,884 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:42,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-29 10:46:42,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-29 10:46:43,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-29 10:46:43,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:44,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-29 10:46:44,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:44,641 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-29 10:46:44,641 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:44,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-29 10:46:44,641 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:44,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:44,647 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:44,651 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:44,651 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:44,656 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:44,661 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:44,661 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-29 10:46:44,988 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-29 10:46:44,988 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-29 10:46:44,992 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:44,992 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:44,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:44,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-29 10:46:45,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:45,006 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-29 10:46:45,014 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:45,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:45,183 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:45,218 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:45,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:45,223 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:45,256 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:45,262 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:45,262 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:45,269 [ scc.git] DEBUG [detached HEAD feb63c7] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:45,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:45,269 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:45,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-29 10:46:46,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-29 10:46:46,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-29 10:46:47,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-29 10:46:47,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-29 10:46:48,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:48,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-29 10:46:48,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:48,911 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-29 10:46:48,911 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:48,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-29 10:46:48,912 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:48,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:48,917 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:48,921 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:48,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:48,926 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:48,931 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:48,932 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-29 10:46:49,252 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-29 10:46:49,252 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-29 10:46:49,255 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:49,255 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:49,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:49,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-29 10:46:49,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:49,270 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-29 10:46:49,278 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-29 10:46:49,279 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:49,281 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-29 10:46:49,281 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-29 10:46:49,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:49,430 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:49,465 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:49,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:49,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:49,503 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:49,508 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:49,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:49,516 [ scc.git] DEBUG [detached HEAD 101f724] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:49,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:49,517 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:49,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-29 10:46:50,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-29 10:46:50,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-29 10:46:51,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-29 10:46:51,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:52,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-29 10:46:52,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:52,799 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-29 10:46:52,799 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:52,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-29 10:46:52,799 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:52,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:52,805 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:52,809 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:52,810 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:52,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:52,820 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:52,820 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-29 10:46:53,187 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-29 10:46:53,188 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-29 10:46:53,191 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:53,191 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:53,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:53,196 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-29 10:46:53,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:53,205 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-29 10:46:53,271 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG Auto-merging setup.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-29 10:46:53,271 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:46:53,271 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:46:53,276 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-29 10:46:53,282 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-29 10:46:53,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:53,419 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-29 10:46:53,424 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-29 10:46:53,429 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/views.py - omero_signup/signup_settings.py --conflicts 2024-10-29 10:46:53,434 [ scc.config] DEBUG Found github.token 2024-10-29 10:46:53,434 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-29 10:46:53,434 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:53,469 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:53,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:53,473 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:53,507 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:53,513 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:53,513 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:53,520 [ scc.git] DEBUG [detached HEAD 3521f6c] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:53,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:53,521 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:53,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-29 10:46:54,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-29 10:46:54,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-29 10:46:55,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-29 10:46:55,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:46:56,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-29 10:46:56,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:46:56,532 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-29 10:46:56,532 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:56,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-29 10:46:56,532 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:56,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:56,538 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:56,542 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:56,542 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:56,547 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:56,552 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:56,553 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-29 10:46:56,872 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-29 10:46:56,872 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-29 10:46:56,875 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:56,875 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:56,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:56,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-29 10:46:56,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:56,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-29 10:46:56,903 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:46:56,905 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-29 10:46:56,905 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-29 10:46:56,906 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-29 10:46:56,906 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-29 10:46:56,906 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-29 10:46:56,906 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-29 10:46:56,906 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-29 10:46:56,907 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-29 10:46:56,907 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-29 10:46:56,908 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-29 10:46:56,908 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-29 10:46:56,909 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-29 10:46:56,909 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-29 10:46:56,909 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-29 10:46:56,909 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-29 10:46:57,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:46:57,051 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:57,085 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:57,124 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:57,129 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:57,130 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:57,137 [ scc.git] DEBUG [detached HEAD 7c4c11d] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:57,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:57,137 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:57,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-29 10:46:57,472 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:57,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-29 10:46:57,472 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,477 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:57,481 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:57,481 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:57,486 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:57,491 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:57,491 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:57,491 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,496 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:57,531 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:57,570 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:57,575 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:57,576 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:57,583 [ scc.git] DEBUG [detached HEAD d5137f6] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:57,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:57,583 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:57,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-29 10:46:57,883 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:46:57,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-29 10:46:57,883 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,888 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:46:57,892 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:46:57,892 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:46:57,897 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:46:57,902 [ scc.git] DEBUG Already up to date. 2024-10-29 10:46:57,902 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:46:57,902 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,906 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:46:57,940 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:46:57,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:46:57,945 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:46:57,979 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:46:57,985 [ scc.git] DEBUG has no local changes 2024-10-29 10:46:57,985 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:46:57,993 [ scc.git] DEBUG [detached HEAD c720ec9] merge master -Dorg -Ssuccess-only 2024-10-29 10:46:57,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:46:57,993 [ scc.git] INFO Overriding base-branch from master to main 2024-10-29 10:46:57,993 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:46:58,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-29 10:46:58,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-29 10:46:59,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-29 10:46:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-29 10:47:00,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-29 10:47:00,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:47:01,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-29 10:47:01,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:47:01,606 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-29 10:47:01,606 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:47:01,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-29 10:47:01,607 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:01,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:01,612 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-29 10:47:01,617 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:47:01,617 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-29 10:47:01,622 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-29 10:47:01,627 [ scc.git] DEBUG Already up to date. 2024-10-29 10:47:01,627 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-29 10:47:01,925 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-29 10:47:01,925 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-29 10:47:01,928 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:47:01,928 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:01,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:01,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-29 10:47:01,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:01,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-29 10:47:01,951 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-29 10:47:01,951 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-29 10:47:01,951 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:47:01,951 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:47:01,956 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-29 10:47:01,962 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-29 10:47:02,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:02,095 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-29 10:47:02,100 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-29 10:47:02,105 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-29 10:47:02,109 [ scc.config] DEBUG Found github.token 2024-10-29 10:47:02,109 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-29 10:47:02,109 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:47:02,144 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:47:02,182 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:47:02,188 [ scc.git] DEBUG has no local changes 2024-10-29 10:47:02,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:47:02,195 [ scc.git] DEBUG [detached HEAD 059332d] merge master -Dorg -Ssuccess-only 2024-10-29 10:47:02,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:02,195 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:47:02,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-29 10:47:02,506 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:47:02,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-29 10:47:02,506 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:47:02,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:47:02,516 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:47:02,520 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:47:02,525 [ scc.git] DEBUG Already up to date. 2024-10-29 10:47:02,526 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:47:02,526 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,530 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:47:02,565 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:47:02,604 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:47:02,609 [ scc.git] DEBUG has no local changes 2024-10-29 10:47:02,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:47:02,665 [ scc.git] DEBUG [detached HEAD 06984e5] merge master -Dorg -Ssuccess-only 2024-10-29 10:47:02,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:02,666 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:47:02,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-29 10:47:02,919 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:47:02,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-29 10:47:02,919 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,923 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:47:02,928 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:47:02,928 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:47:02,933 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:47:02,938 [ scc.git] DEBUG Already up to date. 2024-10-29 10:47:02,938 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:47:02,938 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,942 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:47:02,977 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:02,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:02,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:47:03,016 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:47:03,021 [ scc.git] DEBUG has no local changes 2024-10-29 10:47:03,022 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:47:03,029 [ scc.git] DEBUG [detached HEAD ffce027] merge master -Dorg -Ssuccess-only 2024-10-29 10:47:03,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:03,029 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:47:03,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-29 10:47:03,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-29 10:47:04,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-29 10:47:04,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-29 10:47:05,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:47:05,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-29 10:47:06,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:47:06,187 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-29 10:47:06,187 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:47:06,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-29 10:47:06,187 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:06,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:06,193 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-29 10:47:06,197 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:47:06,198 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-29 10:47:06,202 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-29 10:47:06,207 [ scc.git] DEBUG Already up to date. 2024-10-29 10:47:06,208 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-29 10:47:06,524 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-29 10:47:06,525 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-29 10:47:06,528 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:47:06,528 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:06,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:06,533 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-29 10:47:06,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:06,543 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-29 10:47:06,552 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-29 10:47:06,553 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-29 10:47:06,553 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:47:06,553 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:47:06,558 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-29 10:47:06,564 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-29 10:47:06,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:06,696 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-29 10:47:06,701 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-29 10:47:06,705 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-29 10:47:06,710 [ scc.config] DEBUG Found github.token 2024-10-29 10:47:06,710 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-29 10:47:06,710 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:47:06,744 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:06,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:06,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:47:06,782 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:47:06,788 [ scc.git] DEBUG has no local changes 2024-10-29 10:47:06,788 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:47:06,796 [ scc.git] DEBUG [detached HEAD 18b18ad] merge master -Dorg -Ssuccess-only 2024-10-29 10:47:06,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:06,796 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-29 10:47:06,796 [ scc.repo] DEBUG ## PRs found: 2024-10-29 10:47:07,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-29 10:47:07,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-29 10:47:08,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-29 10:47:08,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-29 10:47:09,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:47:09,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-29 10:47:10,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-29 10:47:10,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:47:10,640 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-29 10:47:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-29 10:47:11,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-29 10:47:12,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-29 10:47:12,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-29 10:47:13,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-29 10:47:13,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-29 10:47:13,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-29 10:47:14,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-29 10:47:14,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-29 10:47:15,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-29 10:47:15,290 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-29 10:47:15,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-29 10:47:16,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-29 10:47:16,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-29 10:47:17,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-29 10:47:17,220 [ scc.repo] DEBUG ## Branches found: 2024-10-29 10:47:17,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-29 10:47:17,221 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:17,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:17,226 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-29 10:47:17,231 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-29 10:47:17,231 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-29 10:47:17,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-29 10:47:17,242 [ scc.git] DEBUG Already up to date. 2024-10-29 10:47:17,242 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-29 10:47:17,574 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-29 10:47:17,574 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-29 10:47:17,578 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-29 10:47:17,896 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-29 10:47:17,896 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-29 10:47:17,899 [ scc.git] DEBUG ## Unique users: [] 2024-10-29 10:47:17,899 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:17,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:17,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-29 10:47:17,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:17,915 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-29 10:47:18,092 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-29 10:47:18,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-29 10:47:18,092 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-29 10:47:18,092 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-29 10:47:18,097 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-29 10:47:18,103 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-29 10:47:18,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:18,277 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-29 10:47:18,283 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-29 10:47:18,288 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#228](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-29 10:47:18,292 [ scc.config] DEBUG Found github.token 2024-10-29 10:47:18,293 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-29 10:47:18,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-29 10:47:18,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:18,302 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-29 10:47:18,311 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-29 10:47:18,313 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-29 10:47:18,313 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-29 10:47:18,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:18,656 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-29 10:47:18,691 [ scc.git] DEBUG Get sha1 of %s 2024-10-29 10:47:18,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-29 10:47:18,696 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:47:18,731 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:47:18,737 [ scc.git] DEBUG has no local changes 2024-10-29 10:47:18,737 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:47:18,744 [ scc.git] DEBUG [detached HEAD be842b3] merge master -Dorg -Ssuccess-only 2024-10-29 10:47:18,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:18,745 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-29 10:47:18,814 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-29 10:47:19,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:19,049 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-29 10:47:19,053 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-29 10:47:19,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:19,432 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-29 10:47:19,436 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-29 10:47:19,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:19,815 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-29 10:47:19,819 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-29 10:47:20,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:20,202 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-29 10:47:20,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:20,581 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-29 10:47:20,586 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-29 10:47:20,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:20,967 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-29 10:47:20,971 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-29 10:47:21,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:21,351 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-29 10:47:21,355 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-29 10:47:21,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:21,736 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-29 10:47:21,741 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-29 10:47:22,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:22,219 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-29 10:47:22,223 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-29 10:47:22,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:22,611 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-29 10:47:22,616 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-29 10:47:22,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:23,001 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-29 10:47:23,006 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-29 10:47:23,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:23,387 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-29 10:47:23,391 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-29 10:47:23,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:23,770 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-29 10:47:24,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:24,152 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-29 10:47:24,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:24,530 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-29 10:47:24,535 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-29 10:47:24,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:24,915 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-29 10:47:25,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:25,295 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-29 10:47:25,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:25,673 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-29 10:47:25,677 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-29 10:47:26,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:26,061 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-29 10:47:26,065 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-29 10:47:26,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:26,446 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-29 10:47:26,450 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-29 10:47:26,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:26,855 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-29 10:47:26,859 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-29 10:47:27,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-29 10:47:27,235 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-29 10:47:27,235 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-29 10:47:27,309 [ scc.git] DEBUG has local changes 2024-10-29 10:47:27,309 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' (status: None) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Conflicting PRs (not included): - PR 488 will-moore 'Mobile layout' Repository: ome/omero-mapr Excluded PRs: - PR 87 will-moore 'Tests dont use omero utils' (status: failure) - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Conflicting PRs (not included): - PR 88 pwalczysko 'Fix build jinja2' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#228 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/228/)' 2024-10-29 10:47:27,323 [ scc.git] DEBUG [detached HEAD 3bf84ca] merge master -Dorg -Ssuccess-only 2024-10-29 10:47:27,323 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-29 10:47:27,323 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-29 10:47:27,323 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,323 [ scc.merge] INFO 2024-10-29 10:47:27,323 [ scc.merge] INFO 2024-10-29 10:47:27,323 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-29 10:47:27,323 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,323 [ scc.merge] INFO 2024-10-29 10:47:27,323 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,323 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-29 10:47:27,323 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-29 10:47:27,324 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-29 10:47:27,324 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-29 10:47:27,324 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-29 10:47:27,324 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-29 10:47:27,324 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-29 10:47:27,324 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,324 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-29 10:47:27,324 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' (status: None) 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-29 10:47:27,324 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-29 10:47:27,324 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,324 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-29 10:47:27,325 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-29 10:47:27,325 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-29 10:47:27,325 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-29 10:47:27,325 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,325 [ scc.merge] INFO 2024-10-29 10:47:27,325 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-29 10:47:27,325 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 488 will-moore 'Mobile layout' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-29 10:47:27,326 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 87 will-moore 'Tests dont use omero utils' (status: failure) 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-29 10:47:27,326 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 88 pwalczysko 'Fix build jinja2' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-29 10:47:27,326 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-29 10:47:27,326 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-29 10:47:27,326 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,326 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-29 10:47:27,326 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-29 10:47:27,326 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,327 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-29 10:47:27,327 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,327 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,327 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,327 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,327 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,327 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-29 10:47:27,327 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,327 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-29 10:47:27,327 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,327 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-29 10:47:27,328 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-29 10:47:27,328 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-29 10:47:27,328 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Repository: ome/scripts 2024-10-29 10:47:27,328 [ scc.merge] INFO Excluded PRs: 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-29 10:47:27,328 [ scc.merge] INFO Already up to date. 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Merged PRs: 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-29 10:47:27,328 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-29 10:47:27,328 [ scc.merge] INFO 2024-10-29 10:47:27,328 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-29 10:47:27,328 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-29 10:47:27,333 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-29 10:47:27,338 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-29 10:47:27,342 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-29 10:47:27,347 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-29 10:47:27,351 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-29 10:47:27,356 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-29 10:47:27,360 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-29 10:47:27,365 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-29 10:47:27,370 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-29 10:47:27,374 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-29 10:47:27,379 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-29 10:47:27,383 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-29 10:47:27,388 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-29 10:47:27,392 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-29 10:47:27,397 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-29 10:47:27,401 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-29 10:47:27,406 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-29 10:47:27,411 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-29 10:47:27,415 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-29 10:47:27,420 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-29 10:47:27,424 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-29 10:47:27,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-29 10:47:27,429 [ scc.git] DEBUG Calling 'git remote' 2024-10-29 10:47:27,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 27b754f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 24444fe6 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 7cab07d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-29 10:48:10,621 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-29 10:48:19,399 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-29 10:48:21,713 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-29 10:48:26,274 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-29 10:49:06,148 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS