Started by user devspace
Running as SYSTEM
Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /uod/idr-scratch/merge-ci
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /uod/idr-scratch/merge-ci/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url git@github.com:openmicroscopy/data_repo_config.git # timeout=10
Fetching upstream changes from git@github.com:openmicroscopy/data_repo_config.git
> git --version # timeout=10
> git --version # 'git version 2.39.3'
> git fetch --tags --force --progress -- git@github.com:openmicroscopy/data_repo_config.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision f9da8a3234d190248b25050e0ba579974a10767e (refs/remotes/origin/master)
> git config core.sparsecheckout # timeout=10
> git checkout -f f9da8a3234d190248b25050e0ba579974a10767e # timeout=10
Commit message: "Merge pull request #614 from melissalinkert/gh-4198"
> git rev-list --no-walk f9da8a3234d190248b25050e0ba579974a10767e # timeout=10
[merge-ci] $ /bin/bash -xe /tmp/jenkins5686632744707234002.sh
+ python3 -mvenv /tmp/venv
+ source /tmp/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/tmp/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/tmp/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ /tmp/venv/bin/pip install -U pip
Requirement already satisfied: pip in /tmp/venv/lib/python3.9/site-packages (24.2)
+ /tmp/venv/bin/pip install -U scc
Requirement already satisfied: scc in /tmp/venv/lib/python3.9/site-packages (0.20.0)
Requirement already satisfied: PyGithub>=1.54 in /tmp/venv/lib/python3.9/site-packages (from scc) (2.4.0)
Requirement already satisfied: PyYAML>=5.1 in /tmp/venv/lib/python3.9/site-packages (from scc) (6.0.2)
Requirement already satisfied: future in /tmp/venv/lib/python3.9/site-packages (from scc) (1.0.0)
Requirement already satisfied: ruamel.yaml in /tmp/venv/lib/python3.9/site-packages (from scc) (0.18.6)
Requirement already satisfied: ruamel.yaml.jinja2 in /tmp/venv/lib/python3.9/site-packages (from scc) (0.2.7)
Requirement already satisfied: six in /tmp/venv/lib/python3.9/site-packages (from scc) (1.16.0)
Requirement already satisfied: urllib3<2 in /tmp/venv/lib/python3.9/site-packages (from scc) (1.26.20)
Requirement already satisfied: yaclifw<0.3,>=0.2.0 in /tmp/venv/lib/python3.9/site-packages (from scc) (0.2.0)
Requirement already satisfied: pynacl>=1.4.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.5.0)
Requirement already satisfied: requests>=2.14.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (2.32.3)
Requirement already satisfied: pyjwt>=2.4.0 in /tmp/venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.9.0)
Requirement already satisfied: typing-extensions>=4.0.0 in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (4.12.2)
Requirement already satisfied: Deprecated in /tmp/venv/lib/python3.9/site-packages (from PyGithub>=1.54->scc) (1.2.14)
Requirement already satisfied: ruamel.yaml.clib>=0.2.7 in /tmp/venv/lib/python3.9/site-packages (from ruamel.yaml->scc) (0.2.8)
Requirement already satisfied: cryptography>=3.4.0 in /tmp/venv/lib/python3.9/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (43.0.1)
Requirement already satisfied: cffi>=1.4.1 in /tmp/venv/lib/python3.9/site-packages (from pynacl>=1.4.0->PyGithub>=1.54->scc) (1.17.1)
Requirement already satisfied: charset-normalizer<4,>=2 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.3.2)
Requirement already satisfied: idna<4,>=2.5 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.8)
Requirement already satisfied: certifi>=2017.4.17 in /tmp/venv/lib/python3.9/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2024.8.30)
Requirement already satisfied: wrapt<2,>=1.10 in /tmp/venv/lib/python3.9/site-packages (from Deprecated->PyGithub>=1.54->scc) (1.16.0)
Requirement already satisfied: pycparser in /tmp/venv/lib/python3.9/site-packages (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) (2.22)
+ test -e src
+ /tmp/venv/bin/scc merge master --no-ask --reset --comment --push merge_ci
2024-09-11 09:14:50,723 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-09-11 09:14:50,723 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-09-11 09:14:50,723 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-09-11 09:14:50,723 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-09-11 09:14:50,723 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-09-11 09:15:06,930 [ scc.git] INFO Conflict detection failed
2024-09-11 09:15:07,384 [ scc.git] INFO - PR 624 melissalinkert 'Add datasets provided in https://github.com/ome/bioformats/pull/4205'
Conflicting PR. Removed from build [DATA_REPO_CONFIG-merge#214](https://merge-ci.openmicroscopy.org/jenkins/job/DATA_REPO_CONFIG-merge/214/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/DATA_REPO_CONFIG-merge/214/consoleText) for more details.
Possible conflicts:
- Conflict detection failed
- None
--conflicts
Traceback (most recent call last):
File "/tmp/venv/lib64/python3.9/site-packages/scc/main.py", line 64, in entry_point
main("scc", items=[
File "/tmp/venv/lib64/python3.9/site-packages/yaclifw/framework.py", line 188, in main
ns.func(ns)
File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 3332, in __call__
self.merge(args, self.main_repo)
File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 3357, in merge
updated, merge_msg = main_repo.rmerge(
File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1861, in rmerge
summary_update = self.summary_commit(
File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1924, in summary_commit
self.call("git", "commit", "-a", "-n", "-m", commit_message)
File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1162, in call
return self.wrap_call(self.debugWrap, *command, **kwargs)
File "/tmp/venv/lib64/python3.9/site-packages/scc/git.py", line 1187, in wrap_call
raise Exception("rc=%s" % rc)
Exception: rc=1
Build step 'Execute shell' marked build as failure
Finished: FAILURE