Started by user devspace
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
> git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.39.3'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 17debd0389692e2455795d3c9d15b57151d5d590 (refs/remotes/origin/master)
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10
Commit message: "Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54"
> git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 96
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ popd
~/workspace/OMERO-plugins-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
Using cached pip-24.0-py3-none-any.whl (2.1 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 21.2.3
Uninstalling pip-21.2.3:
Successfully uninstalled pip-21.2.3
Successfully installed pip-24.0
+ python3 -m pip install scc
Collecting scc
Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.19.1-py3-none-any.whl (48 kB)
Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.6.2-py3-none-any.whl (164 kB)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB)
Using cached idna-3.7-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-06-18 08:41:57,815 [ scc.config] DEBUG Found github.token
2024-06-18 08:41:57,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-18 08:41:58,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:41:58,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:41:58,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-18 08:41:58,870 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 09:06
2024-06-18 08:41:58,871 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:41:58,874 [ scc.git] DEBUG Check current status
2024-06-18 08:41:58,875 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:41:58,878 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54
2024-06-18 08:41:58,878 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:41:58,919 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-06-18 08:41:58,921 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-06-18 08:41:58,924 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-06-18 08:41:58,926 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b)
2024-06-18 08:41:58,988 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87)
2024-06-18 08:41:58,990 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-06-18 08:41:58,992 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-06-18 08:41:58,995 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637)
2024-06-18 08:41:58,998 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-06-18 08:41:59,001 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-06-18 08:41:59,003 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-06-18 08:41:59,006 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-06-18 08:41:59,009 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-06-18 08:41:59,012 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-06-18 08:41:59,015 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54)
2024-06-18 08:41:59,017 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-06-18 08:41:59,020 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-06-18 08:41:59,022 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-06-18 08:41:59,024 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-06-18 08:41:59,027 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-06-18 08:41:59,029 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-06-18 08:41:59,033 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893)
2024-06-18 08:41:59,037 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:41:59,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2024-06-18 08:41:59,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:00,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:00,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:01,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:01,134 [ scc.git] DEBUG Resetting...
2024-06-18 08:42:01,134 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-18 08:42:01,141 [ scc.git] DEBUG HEAD is now at 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54
2024-06-18 08:42:01,142 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-18 08:42:01,230 [ scc.git] DEBUG Check current status
2024-06-18 08:42:01,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:01,234 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54
2024-06-18 08:42:01,234 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:01,274 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-06-18 08:42:01,276 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-06-18 08:42:01,279 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-06-18 08:42:01,281 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b)
2024-06-18 08:42:01,288 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87)
2024-06-18 08:42:01,290 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-06-18 08:42:01,293 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-06-18 08:42:01,295 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637)
2024-06-18 08:42:01,298 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-06-18 08:42:01,301 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-06-18 08:42:01,303 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-06-18 08:42:01,305 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-06-18 08:42:01,308 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-06-18 08:42:01,311 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-06-18 08:42:01,313 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54)
2024-06-18 08:42:01,316 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-06-18 08:42:01,318 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-06-18 08:42:01,320 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-06-18 08:42:01,322 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-06-18 08:42:01,325 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-06-18 08:42:01,327 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-06-18 08:42:01,330 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893)
2024-06-18 08:42:01,331 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-18 08:42:01,331 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-18 08:42:01,331 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-18 08:42:01,331 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-18 08:42:01,331 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-18 08:42:01,331 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:42:01,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2024-06-18 08:42:02,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/375 HTTP/1.1" 200 None
2024-06-18 08:42:02,118 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:42:02,118 [ scc.repo] DEBUG - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`'
2024-06-18 08:42:02,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None
2024-06-18 08:42:02,597 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:42:02,597 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`'
2024-06-18 08:42:02,597 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:42:02,597 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:42:02,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:42:02,601 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:42:02,604 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:42:02,604 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:42:02,607 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:42:02,611 [ scc.git] DEBUG Already up to date.
2024-06-18 08:42:02,611 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head'
2024-06-18 08:42:02,977 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2024-06-18 08:42:02,977 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD
2024-06-18 08:42:02,981 [ scc.git] DEBUG Calling 'git fetch origin pull/375/head'
2024-06-18 08:42:03,367 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2024-06-18 08:42:03,367 [ scc.git] DEBUG * branch refs/pull/375/head -> FETCH_HEAD
2024-06-18 08:42:03,371 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:42:03,372 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:42:03,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:42:03,375 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc'
2024-06-18 08:42:03,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:42:03,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc'
2024-06-18 08:42:03,396 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:42:03,398 [ scc.git] DEBUG omero-test-infra | 2 +-
2024-06-18 08:42:03,398 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-06-18 08:42:03,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:42:03,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...90e6cc95443ce4747893ad9176814fa340f114e8'
2024-06-18 08:42:03,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:42:03,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 375 (Bump omero-figure from `3d9e3b8` to `ffc7e07`) 90e6cc95443ce4747893ad9176814fa340f114e8'
2024-06-18 08:42:03,596 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:42:03,598 [ scc.git] DEBUG omero-figure | 2 +-
2024-06-18 08:42:03,598 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-06-18 08:42:03,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:42:03,999 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:42:04,053 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'ffc7e0758098d2dc59c1db60bece8f7c26b49c5e'
2024-06-18 08:42:04,064 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73'
2024-06-18 08:42:04,065 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:42:04,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:42:04,068 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:42:04,786 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fec0b69a190> has no local changes
2024-06-18 08:42:04,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`'
- PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:42:04,850 [ scc.git] DEBUG [detached HEAD 2e0028b] merge master -Dorg -Snone
2024-06-18 08:42:04,851 [ scc.merge] INFO Repository: ome/omero-plugins
2024-06-18 08:42:04,851 [ scc.merge] INFO Already up to date.
2024-06-18 08:42:04,851 [ scc.merge] INFO
2024-06-18 08:42:04,851 [ scc.merge] INFO Merged PRs:
2024-06-18 08:42:04,851 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`'
2024-06-18 08:42:04,851 [ scc.merge] INFO - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`'
2024-06-18 08:42:04,851 [ scc.merge] INFO
2024-06-18 08:42:04,851 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-18 08:42:04,851 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2024-06-18 08:42:13,917 [ scc.config] DEBUG Found github.token
2024-06-18 08:42:13,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-06-18 08:42:14,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:42:14,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:42:14,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-06-18 08:42:14,933 [ scc.gh] DEBUG 4978 remaining from 5000 (Reset at 09:06
2024-06-18 08:42:14,934 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:14,937 [ scc.git] DEBUG Check current status
2024-06-18 08:42:14,937 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:14,940 [ scc.git] DEBUG 2e0028b merge master -Dorg -Snone
2024-06-18 08:42:14,940 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:14,982 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-06-18 08:42:14,984 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-06-18 08:42:14,987 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-06-18 08:42:14,989 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b)
2024-06-18 08:42:14,993 [ scc.git] DEBUG ffc7e0758098d2dc59c1db60bece8f7c26b49c5e omero-figure (v7.0.0-1-gffc7e075)
2024-06-18 08:42:14,995 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-06-18 08:42:14,997 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-06-18 08:42:15,000 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637)
2024-06-18 08:42:15,003 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-06-18 08:42:15,006 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-06-18 08:42:15,009 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-06-18 08:42:15,011 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-06-18 08:42:15,014 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-06-18 08:42:15,017 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-06-18 08:42:15,020 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2024-06-18 08:42:15,022 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-06-18 08:42:15,025 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-06-18 08:42:15,027 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-06-18 08:42:15,029 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-06-18 08:42:15,031 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-06-18 08:42:15,034 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-06-18 08:42:15,037 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893)
2024-06-18 08:42:15,041 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:15,041 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-06-18 08:42:15,043 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2024-06-18 08:42:15,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2024-06-18 08:42:16,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:16,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:16,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:17,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:17,285 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:17,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-06-18 08:42:17,349 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:17,352 [ scc.git] DEBUG Check current status
2024-06-18 08:42:17,353 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:17,356 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1
2024-06-18 08:42:17,356 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:17,392 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:17,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2024-06-18 08:42:18,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:18,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:19,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:19,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:19,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:19,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:19,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-06-18 08:42:19,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:19,849 [ scc.git] DEBUG Check current status
2024-06-18 08:42:19,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:19,852 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest
2024-06-18 08:42:19,852 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:19,888 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:20,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2024-06-18 08:42:20,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:21,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:21,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:22,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:22,133 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:22,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:22,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-06-18 08:42:22,168 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:22,172 [ scc.git] DEBUG Check current status
2024-06-18 08:42:22,172 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:22,175 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest
2024-06-18 08:42:22,175 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:22,211 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:22,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2024-06-18 08:42:23,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:23,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:23,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:24,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:24,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:24,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:24,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-06-18 08:42:24,369 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:24,372 [ scc.git] DEBUG Check current status
2024-06-18 08:42:24,372 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:24,376 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config
2024-06-18 08:42:24,376 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:24,411 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:24,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2024-06-18 08:42:25,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:25,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:26,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:26,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:26,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:26,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:26,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-18 08:42:26,605 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:26,608 [ scc.git] DEBUG Check current status
2024-06-18 08:42:26,608 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:26,618 [ scc.git] DEBUG ffc7e075 Bump version: 7.0.0 → 7.0.1.dev0
2024-06-18 08:42:26,619 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:26,654 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:27,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2024-06-18 08:42:27,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:27,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:28,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:28,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:28,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:28,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:28,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-18 08:42:28,782 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:28,786 [ scc.git] DEBUG Check current status
2024-06-18 08:42:28,786 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:28,789 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0
2024-06-18 08:42:28,790 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:28,826 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:29,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2024-06-18 08:42:29,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:30,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:30,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:30,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:30,969 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:31,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:31,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-18 08:42:31,004 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:31,007 [ scc.git] DEBUG Check current status
2024-06-18 08:42:31,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:31,011 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0
2024-06-18 08:42:31,011 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:31,049 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:31,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2024-06-18 08:42:31,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:32,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:32,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:33,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:33,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:33,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:33,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-18 08:42:33,251 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:33,255 [ scc.git] DEBUG Check current status
2024-06-18 08:42:33,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:33,258 [ scc.git] DEBUG 7b7a637 add dev to version
2024-06-18 08:42:33,258 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:33,295 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:33,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2024-06-18 08:42:34,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:34,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:35,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:35,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:35,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:35,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:35,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-18 08:42:35,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:35,474 [ scc.git] DEBUG Check current status
2024-06-18 08:42:35,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:35,478 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master
2024-06-18 08:42:35,478 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:35,515 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:35,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2024-06-18 08:42:36,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:36,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:37,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:37,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:37,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:37,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:37,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-18 08:42:37,713 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:37,716 [ scc.git] DEBUG Check current status
2024-06-18 08:42:37,716 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:37,720 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-18 08:42:37,720 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:37,759 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:38,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2024-06-18 08:42:38,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:39,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:39,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:39,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:39,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:39,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:39,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-18 08:42:39,959 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:39,962 [ scc.git] DEBUG Check current status
2024-06-18 08:42:39,962 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:39,966 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0
2024-06-18 08:42:39,966 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:40,003 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:40,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2024-06-18 08:42:40,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:41,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:41,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:42,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:42,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:42,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:42,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-18 08:42:42,186 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:42,189 [ scc.git] DEBUG Check current status
2024-06-18 08:42:42,189 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:42,193 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4
2024-06-18 08:42:42,193 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:42,230 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:42,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2024-06-18 08:42:43,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:43,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:44,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:44,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:44,426 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:44,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:44,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-18 08:42:44,461 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:44,464 [ scc.git] DEBUG Check current status
2024-06-18 08:42:44,464 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:44,468 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config
2024-06-18 08:42:44,468 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:44,505 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:44,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2024-06-18 08:42:45,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:45,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:46,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:46,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:46,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:46,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:46,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-18 08:42:46,709 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:46,713 [ scc.git] DEBUG Check current status
2024-06-18 08:42:46,713 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:46,717 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-06-18 08:42:46,717 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:46,756 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:47,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2024-06-18 08:42:47,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:48,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:48,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:48,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:48,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:48,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:48,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-18 08:42:48,965 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:48,968 [ scc.git] DEBUG Check current status
2024-06-18 08:42:48,968 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:48,972 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2024-06-18 08:42:48,973 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:49,011 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:49,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-06-18 08:42:49,348 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-06-18 08:42:49,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2024-06-18 08:42:50,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:50,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:50,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:51,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:51,301 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:51,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:51,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-18 08:42:51,336 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:51,340 [ scc.git] DEBUG Check current status
2024-06-18 08:42:51,340 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:51,344 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest
2024-06-18 08:42:51,344 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:51,382 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:51,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2024-06-18 08:42:52,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:52,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:53,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:53,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:53,638 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:53,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:53,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-18 08:42:53,674 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:53,678 [ scc.git] DEBUG Check current status
2024-06-18 08:42:53,678 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:53,682 [ scc.git] DEBUG deab817 update setup-python to v4
2024-06-18 08:42:53,682 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:53,720 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:54,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2024-06-18 08:42:54,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:55,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:55,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:55,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:55,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:55,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:55,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-18 08:42:55,889 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:55,893 [ scc.git] DEBUG Check current status
2024-06-18 08:42:55,893 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:55,897 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-06-18 08:42:55,898 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:55,936 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:55,937 [ scc.git] DEBUG Repository configuration:
base-branch: main
2024-06-18 08:42:56,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2024-06-18 08:42:56,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:57,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:42:57,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:42:58,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:42:58,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:42:58,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:42:58,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-18 08:42:58,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:42:58,106 [ scc.git] DEBUG Check current status
2024-06-18 08:42:58,106 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:42:58,110 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0
2024-06-18 08:42:58,111 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:42:58,149 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:42:58,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-06-18 08:42:58,513 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-06-18 08:42:58,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2024-06-18 08:42:59,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:42:59,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:43:00,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:43:00,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:43:00,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:00,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:00,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-18 08:43:00,526 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:43:00,530 [ scc.git] DEBUG Check current status
2024-06-18 08:43:00,530 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:43:00,534 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0
2024-06-18 08:43:00,535 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:43:00,572 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:43:00,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-06-18 08:43:00,979 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-06-18 08:43:01,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2024-06-18 08:43:01,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:43:02,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:43:02,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:43:02,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:43:02,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:02,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:02,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-18 08:43:02,944 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:43:02,948 [ scc.git] DEBUG Check current status
2024-06-18 08:43:02,948 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:43:02,952 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-06-18 08:43:02,953 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:43:02,990 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:43:03,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2024-06-18 08:43:03,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:43:04,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:43:04,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:43:05,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:43:05,104 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:05,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:05,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-18 08:43:05,140 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-06-18 08:43:05,145 [ scc.git] DEBUG Check current status
2024-06-18 08:43:05,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:43:05,212 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-18 08:43:05,212 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:43:05,251 [ scc.config] DEBUG Found remote.origin.url
2024-06-18 08:43:05,251 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-06-18 08:43:05,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-18 08:43:05,522 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-18 08:43:05,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2024-06-18 08:43:06,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-06-18 08:43:06,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-06-18 08:43:07,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-06-18 08:43:07,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-06-18 08:43:07,463 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:07,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:07,500 [ scc.git] DEBUG Resetting...
2024-06-18 08:43:07,500 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-06-18 08:43:07,509 [ scc.git] DEBUG HEAD is now at 2e0028b merge master -Dorg -Snone
2024-06-18 08:43:07,509 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-06-18 08:43:07,600 [ scc.git] DEBUG Check current status
2024-06-18 08:43:07,600 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-06-18 08:43:07,604 [ scc.git] DEBUG 2e0028b merge master -Dorg -Snone
2024-06-18 08:43:07,604 [ scc.git] DEBUG Calling 'git submodule status'
2024-06-18 08:43:07,646 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD)
2024-06-18 08:43:07,649 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6)
2024-06-18 08:43:07,651 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42)
2024-06-18 08:43:07,654 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b)
2024-06-18 08:43:07,657 [ scc.git] DEBUG ffc7e0758098d2dc59c1db60bece8f7c26b49c5e omero-figure (v7.0.0-1-gffc7e075)
2024-06-18 08:43:07,659 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3)
2024-06-18 08:43:07,662 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435)
2024-06-18 08:43:07,665 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637)
2024-06-18 08:43:07,667 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15)
2024-06-18 08:43:07,670 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec)
2024-06-18 08:43:07,672 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2)
2024-06-18 08:43:07,675 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6)
2024-06-18 08:43:07,678 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5)
2024-06-18 08:43:07,680 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db)
2024-06-18 08:43:07,683 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2024-06-18 08:43:07,685 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c)
2024-06-18 08:43:07,687 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2024-06-18 08:43:07,690 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245)
2024-06-18 08:43:07,692 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132)
2024-06-18 08:43:07,694 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1)
2024-06-18 08:43:07,697 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2024-06-18 08:43:07,700 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893)
2024-06-18 08:43:07,701 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-06-18 08:43:07,701 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-06-18 08:43:07,701 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-06-18 08:43:07,701 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-06-18 08:43:07,701 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-06-18 08:43:07,701 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-06-18 08:43:07,701 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:43:08,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2024-06-18 08:43:08,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/375 HTTP/1.1" 200 None
2024-06-18 08:43:08,492 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:43:09,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8 HTTP/1.1" 200 None
2024-06-18 08:43:09,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:09,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8 HTTP/1.1" 200 None
2024-06-18 08:43:10,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/90e6cc95443ce4747893ad9176814fa340f114e8?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:10,443 [ scc.repo] DEBUG - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`'
2024-06-18 08:43:10,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None
2024-06-18 08:43:10,904 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:43:11,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None
2024-06-18 08:43:11,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:12,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None
2024-06-18 08:43:12,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c8279eaae4892995e532fa290a1f76ace85afdbc?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:12,961 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`'
2024-06-18 08:43:12,961 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:43:12,961 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:12,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:12,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:43:12,970 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:43:12,971 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:43:12,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:43:12,980 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:12,981 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head'
2024-06-18 08:43:13,384 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2024-06-18 08:43:13,385 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD
2024-06-18 08:43:13,390 [ scc.git] DEBUG Calling 'git fetch origin pull/375/head'
2024-06-18 08:43:13,777 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2024-06-18 08:43:13,777 [ scc.git] DEBUG * branch refs/pull/375/head -> FETCH_HEAD
2024-06-18 08:43:13,781 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:43:13,782 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:13,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:13,786 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc'
2024-06-18 08:43:13,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:13,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc'
2024-06-18 08:43:13,801 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:13,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:13,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...90e6cc95443ce4747893ad9176814fa340f114e8'
2024-06-18 08:43:13,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:13,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 375 (Bump omero-figure from `3d9e3b8` to `ffc7e07`) 90e6cc95443ce4747893ad9176814fa340f114e8'
2024-06-18 08:43:13,983 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:14,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:14,375 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:43:14,421 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:14,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:14,426 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:43:14,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2024-06-18 08:43:14,798 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:43:14,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-06-18 08:43:14,799 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:14,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:14,803 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:43:14,807 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:43:14,807 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:43:14,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:43:14,816 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:14,817 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:43:14,817 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:14,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:14,821 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:43:14,855 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:14,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:14,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:14,894 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:43:14,899 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa145fee280> has no local changes
2024-06-18 08:43:14,900 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:43:14,906 [ scc.git] DEBUG [detached HEAD 2c26b24] merge master -Dorg -Ssuccess-only
2024-06-18 08:43:14,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:14,907 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:43:15,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2024-06-18 08:43:15,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None
2024-06-18 08:43:16,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None
2024-06-18 08:43:16,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None
2024-06-18 08:43:17,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:17,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:43:18,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None
2024-06-18 08:43:18,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:18,719 [ scc.repo] DEBUG - PR 25 jburel 'review message'
2024-06-18 08:43:19,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2024-06-18 08:43:19,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2024-06-18 08:43:19,721 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:43:19,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-06-18 08:43:19,721 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:19,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:19,726 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:43:19,730 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:43:19,731 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:43:19,735 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:43:19,740 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:19,741 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2024-06-18 08:43:20,136 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2024-06-18 08:43:20,136 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2024-06-18 08:43:20,139 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:43:20,139 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:20,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:20,144 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48'
2024-06-18 08:43:20,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:20,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48'
2024-06-18 08:43:20,181 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:43:20,183 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++----
2024-06-18 08:43:20,183 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-)
2024-06-18 08:43:20,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:20,341 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:43:20,376 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:20,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:20,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:20,414 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:43:20,419 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144f24730> has no local changes
2024-06-18 08:43:20,420 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:43:20,427 [ scc.git] DEBUG [detached HEAD 7106187] merge master -Dorg -Ssuccess-only
2024-06-18 08:43:20,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:20,427 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:43:20,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2024-06-18 08:43:21,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/65 HTTP/1.1" 200 None
2024-06-18 08:43:21,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/65/comments HTTP/1.1" 200 None
2024-06-18 08:43:22,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d2a19861c45a55ebfa0c127d1eaaf818b1527705 HTTP/1.1" 200 None
2024-06-18 08:43:22,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d2a19861c45a55ebfa0c127d1eaaf818b1527705/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:23,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d2a19861c45a55ebfa0c127d1eaaf818b1527705 HTTP/1.1" 200 None
2024-06-18 08:43:23,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d2a19861c45a55ebfa0c127d1eaaf818b1527705?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:23,776 [ scc.repo] DEBUG - PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password'
2024-06-18 08:43:24,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None
2024-06-18 08:43:24,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None
2024-06-18 08:43:25,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None
2024-06-18 08:43:25,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:26,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None
2024-06-18 08:43:26,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:26,523 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-06-18 08:43:27,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None
2024-06-18 08:43:27,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None
2024-06-18 08:43:28,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:28,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None
2024-06-18 08:43:28,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:28,996 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency'
2024-06-18 08:43:29,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None
2024-06-18 08:43:29,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None
2024-06-18 08:43:30,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2024-06-18 08:43:30,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2024-06-18 08:43:31,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None
2024-06-18 08:43:31,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:32,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None
2024-06-18 08:43:32,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:32,773 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2024-06-18 08:43:33,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None
2024-06-18 08:43:33,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2024-06-18 08:43:34,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2024-06-18 08:43:34,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None
2024-06-18 08:43:35,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None
2024-06-18 08:43:35,163 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:43:35,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-06-18 08:43:35,163 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:35,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:35,169 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:43:35,173 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:43:35,173 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:43:35,178 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:43:35,183 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:35,183 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2024-06-18 08:43:35,607 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-06-18 08:43:35,607 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2024-06-18 08:43:35,610 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head'
2024-06-18 08:43:36,048 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-06-18 08:43:36,048 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD
2024-06-18 08:43:36,052 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-06-18 08:43:36,487 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-06-18 08:43:36,487 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-06-18 08:43:36,491 [ scc.git] DEBUG Calling 'git fetch origin pull/65/head'
2024-06-18 08:43:37,116 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2024-06-18 08:43:37,116 [ scc.git] DEBUG * branch refs/pull/65/head -> FETCH_HEAD
2024-06-18 08:43:37,120 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:43:37,120 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:37,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:37,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede'
2024-06-18 08:43:37,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:37,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede'
2024-06-18 08:43:37,142 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:43:37,144 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++-----------------
2024-06-18 08:43:37,145 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-)
2024-06-18 08:43:37,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:37,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae'
2024-06-18 08:43:37,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:37,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae'
2024-06-18 08:43:37,420 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2024-06-18 08:43:37,420 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:43:37,423 [ scc.git] DEBUG setup.py | 3 +--
2024-06-18 08:43:37,423 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++-------
2024-06-18 08:43:37,423 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +-----
2024-06-18 08:43:37,423 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-)
2024-06-18 08:43:37,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:37,731 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639'
2024-06-18 08:43:37,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:37,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639'
2024-06-18 08:43:37,964 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2024-06-18 08:43:37,964 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py
2024-06-18 08:43:37,964 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:43:37,967 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++--
2024-06-18 08:43:37,967 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++
2024-06-18 08:43:37,967 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-)
2024-06-18 08:43:38,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:38,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d2a19861c45a55ebfa0c127d1eaaf818b1527705'
2024-06-18 08:43:38,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:38,158 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 65 (gateway_required() uses omero_user_token if no username and password) d2a19861c45a55ebfa0c127d1eaaf818b1527705'
2024-06-18 08:43:38,221 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2024-06-18 08:43:38,222 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:43:38,224 [ scc.git] DEBUG src/omero_cli_render.py | 20 ++++++++++++++++++++
2024-06-18 08:43:38,224 [ scc.git] DEBUG 1 file changed, 20 insertions(+)
2024-06-18 08:43:38,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:38,559 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:43:38,594 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:38,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:38,599 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:38,633 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:43:38,638 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa145fee0d0> has no local changes
2024-06-18 08:43:38,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 63 sbesson 'Remove python-future dependency'
- PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
- PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:43:38,646 [ scc.git] DEBUG [detached HEAD 40dda30] merge master -Dorg -Ssuccess-only
2024-06-18 08:43:38,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:38,646 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:43:39,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2024-06-18 08:43:39,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None
2024-06-18 08:43:40,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None
2024-06-18 08:43:40,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None
2024-06-18 08:43:41,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None
2024-06-18 08:43:41,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:42,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:43:42,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None
2024-06-18 08:43:42,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:43,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None
2024-06-18 08:43:43,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None
2024-06-18 08:43:43,830 [ scc.repo] DEBUG - PR 147 will-moore 'Name option'
2024-06-18 08:43:44,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2024-06-18 08:43:44,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2024-06-18 08:43:45,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2024-06-18 08:43:45,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None
2024-06-18 08:43:46,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:46,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None
2024-06-18 08:43:47,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:47,329 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID'
2024-06-18 08:43:47,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None
2024-06-18 08:43:48,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None
2024-06-18 08:43:48,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None
2024-06-18 08:43:49,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None
2024-06-18 08:43:49,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:50,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None
2024-06-18 08:43:50,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:50,667 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests'
2024-06-18 08:43:50,667 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:43:50,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-06-18 08:43:50,668 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:50,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:50,673 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:43:50,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:43:50,678 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:43:50,682 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:43:50,687 [ scc.git] DEBUG Already up to date.
2024-06-18 08:43:50,687 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head'
2024-06-18 08:43:51,099 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2024-06-18 08:43:51,100 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD
2024-06-18 08:43:51,103 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head'
2024-06-18 08:43:51,547 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2024-06-18 08:43:51,547 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD
2024-06-18 08:43:51,551 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head'
2024-06-18 08:43:51,946 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2024-06-18 08:43:51,946 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD
2024-06-18 08:43:51,950 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:43:51,950 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:51,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:51,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44'
2024-06-18 08:43:51,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:51,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44'
2024-06-18 08:43:51,977 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2024-06-18 08:43:51,977 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-06-18 08:43:51,977 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2024-06-18 08:43:51,977 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:43:51,977 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:43:51,982 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473'
2024-06-18 08:43:51,988 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config
2024-06-18 08:43:52,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:52,144 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44'
2024-06-18 08:43:52,151 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473'
2024-06-18 08:43:52,156 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_zarr/raw_pixels.py
--conflicts
2024-06-18 08:43:52,160 [ scc.config] DEBUG Found github.token
2024-06-18 08:43:52,160 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts.
2024-06-18 08:43:52,160 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737'
2024-06-18 08:43:52,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:52,170 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737'
2024-06-18 08:43:52,181 [ scc.git] DEBUG Auto-merging .isort.cfg
2024-06-18 08:43:52,182 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg
2024-06-18 08:43:52,182 [ scc.git] DEBUG Auto-merging setup.py
2024-06-18 08:43:52,182 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2024-06-18 08:43:52,182 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-06-18 08:43:52,182 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2024-06-18 08:43:52,182 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2024-06-18 08:43:52,182 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:43:52,182 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:43:52,186 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473'
2024-06-18 08:43:52,192 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config
2024-06-18 08:43:52,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:52,557 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737'
2024-06-18 08:43:52,563 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473'
2024-06-18 08:43:52,568 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- PR #102 will-moore 'Zarr export tests'
- src/omero_zarr/raw_pixels.py
- Upstream changes
- .isort.cfg
- src/omero_zarr/raw_pixels.py
--conflicts
2024-06-18 08:43:52,572 [ scc.config] DEBUG Found github.token
2024-06-18 08:43:52,573 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts.
2024-06-18 08:43:52,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef'
2024-06-18 08:43:52,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:52,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef'
2024-06-18 08:43:52,593 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2024-06-18 08:43:52,593 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-06-18 08:43:52,594 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:43:52,596 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------
2024-06-18 08:43:52,596 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++
2024-06-18 08:43:52,596 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++--
2024-06-18 08:43:52,596 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++-----
2024-06-18 08:43:52,596 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +-
2024-06-18 08:43:52,596 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-)
2024-06-18 08:43:52,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:43:52,959 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:43:52,994 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:43:52,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:43:52,998 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:43:53,034 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:43:53,040 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144f24970> has no local changes
2024-06-18 08:43:53,040 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:43:53,047 [ scc.git] DEBUG [detached HEAD 9fc6b31] merge master -Dorg -Ssuccess-only
2024-06-18 08:43:53,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:43:53,047 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:43:53,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2024-06-18 08:43:53,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None
2024-06-18 08:43:54,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None
2024-06-18 08:43:54,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-06-18 08:43:55,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:55,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:43:56,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None
2024-06-18 08:43:56,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:43:56,863 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-06-18 08:43:57,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None
2024-06-18 08:43:57,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None
2024-06-18 08:43:58,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-06-18 08:43:58,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:43:59,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:43:59,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-06-18 08:44:00,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:00,128 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor'
2024-06-18 08:44:00,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None
2024-06-18 08:44:01,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-06-18 08:44:01,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:02,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:02,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-06-18 08:44:03,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:03,093 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature'
2024-06-18 08:44:03,094 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:03,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-18 08:44:03,094 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:03,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:03,100 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:03,105 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:03,105 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:03,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:03,115 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:03,115 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-06-18 08:44:03,485 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-18 08:44:03,485 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD
2024-06-18 08:44:03,489 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-06-18 08:44:03,891 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-18 08:44:03,891 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-06-18 08:44:03,895 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head'
2024-06-18 08:44:04,313 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-06-18 08:44:04,314 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD
2024-06-18 08:44:04,317 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:04,317 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:04,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:04,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-06-18 08:44:04,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:04,332 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-06-18 08:44:04,555 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++-
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++-
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 +
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++-
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++-
2024-06-18 08:44:04,560 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++
2024-06-18 08:44:04,562 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++
2024-06-18 08:44:04,562 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-)
2024-06-18 08:44:04,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:04,730 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-06-18 08:44:04,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:04,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-06-18 08:44:04,905 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-06-18 08:44:04,905 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js
2024-06-18 08:44:04,905 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2024-06-18 08:44:04,906 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:04,911 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +-
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/css/figure.css | 4 +
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +-
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 +
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++-
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +-
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 +
2024-06-18 08:44:04,911 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +-
2024-06-18 08:44:04,912 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 +
2024-06-18 08:44:04,912 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-)
2024-06-18 08:44:04,912 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png
2024-06-18 08:44:05,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:05,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-06-18 08:44:05,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:05,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6'
2024-06-18 08:44:05,167 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:05,169 [ scc.git] DEBUG setup.py | 2 +-
2024-06-18 08:44:05,170 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-06-18 08:44:05,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:05,545 [ scc.git] DEBUG Resolving previous conflict on Pull Request #568.
2024-06-18 08:44:05,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:06,936 [urllib3.conn] DEBUG https://api.github.com:443 "PATCH /repos/ome/omero-figure/issues/comments/2174695058 HTTP/1.1" 200 None
2024-06-18 08:44:06,936 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:06,972 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:06,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:06,977 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:07,012 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:07,019 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144edfbb0> has no local changes
2024-06-18 08:44:07,019 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (exclude comment)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:07,027 [ scc.git] DEBUG [detached HEAD 2f192b26] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:07,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:07,028 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:07,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-06-18 08:44:07,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-06-18 08:44:08,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-06-18 08:44:09,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-06-18 08:44:09,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:10,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-06-18 08:44:10,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:10,486 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-06-18 08:44:10,486 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:10,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-18 08:44:10,486 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:10,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:10,491 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:10,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:10,495 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:10,500 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:10,505 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:10,505 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-06-18 08:44:10,888 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-06-18 08:44:10,888 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-06-18 08:44:10,892 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:10,892 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:10,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:10,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-06-18 08:44:10,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:10,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-06-18 08:44:10,914 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-06-18 08:44:10,915 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:10,917 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-06-18 08:44:10,917 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-06-18 08:44:11,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:11,079 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:11,114 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:11,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:11,119 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:11,153 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:11,158 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144f1cdf0> has no local changes
2024-06-18 08:44:11,158 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:11,166 [ scc.git] DEBUG [detached HEAD 1623070] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:11,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:11,166 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:11,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-06-18 08:44:12,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-06-18 08:44:12,062 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:44:12,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-06-18 08:44:13,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:13,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:14,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-06-18 08:44:14,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:14,493 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-06-18 08:44:14,493 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:14,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-18 08:44:14,493 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:14,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:14,498 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:14,502 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:14,502 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:14,507 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:14,512 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:14,512 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-06-18 08:44:14,896 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-06-18 08:44:14,896 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD
2024-06-18 08:44:14,900 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:14,900 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:14,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:14,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-06-18 08:44:14,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:14,913 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-06-18 08:44:14,941 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:14,944 [ scc.git] DEBUG package-lock.json | 18 ++++++------------
2024-06-18 08:44:14,944 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-)
2024-06-18 08:44:15,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:15,103 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:15,139 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:15,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:15,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:15,178 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:15,184 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144f1c340> has no local changes
2024-06-18 08:44:15,184 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:15,191 [ scc.git] DEBUG [detached HEAD 01ba632] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:15,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:15,192 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:15,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-06-18 08:44:16,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-06-18 08:44:16,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-06-18 08:44:17,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-06-18 08:44:17,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:18,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:18,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-06-18 08:44:19,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:19,121 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-06-18 08:44:19,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-06-18 08:44:20,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-06-18 08:44:20,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-06-18 08:44:21,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:21,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:22,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-06-18 08:44:22,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:22,614 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-06-18 08:44:23,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-06-18 08:44:23,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-06-18 08:44:24,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-06-18 08:44:24,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:24,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-06-18 08:44:25,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:25,406 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-06-18 08:44:25,406 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:25,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-18 08:44:25,407 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:25,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:25,412 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:25,416 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:25,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:25,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:25,426 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:25,426 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-06-18 08:44:25,864 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-18 08:44:25,864 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-06-18 08:44:25,868 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-06-18 08:44:26,783 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-18 08:44:26,783 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-06-18 08:44:26,787 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-06-18 08:44:27,149 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-06-18 08:44:27,149 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-06-18 08:44:27,152 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:27,153 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:27,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:27,157 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-06-18 08:44:27,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:27,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-06-18 08:44:27,211 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-06-18 08:44:27,211 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:27,214 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-06-18 08:44:27,214 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-06-18 08:44:27,214 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-06-18 08:44:27,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:27,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-06-18 08:44:27,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:27,383 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-06-18 08:44:27,512 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-06-18 08:44:27,512 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-06-18 08:44:27,512 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-06-18 08:44:27,512 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-06-18 08:44:27,513 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:27,516 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-06-18 08:44:27,516 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-06-18 08:44:27,516 [ scc.git] DEBUG src/app/header.html | 5 +
2024-06-18 08:44:27,516 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-06-18 08:44:27,516 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-06-18 08:44:27,516 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-06-18 08:44:27,516 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-06-18 08:44:27,516 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-06-18 08:44:27,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:27,787 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-06-18 08:44:27,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:27,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-06-18 08:44:27,830 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-06-18 08:44:27,830 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:27,833 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-06-18 08:44:27,833 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-06-18 08:44:27,833 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-06-18 08:44:28,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:28,210 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:28,246 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:28,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:28,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:28,285 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:28,292 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144ef78e0> has no local changes
2024-06-18 08:44:28,292 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:28,301 [ scc.git] DEBUG [detached HEAD 89083f5] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:28,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:28,302 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:28,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-06-18 08:44:29,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-06-18 08:44:29,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-06-18 08:44:30,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-06-18 08:44:30,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:31,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:31,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-06-18 08:44:32,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:32,271 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-06-18 08:44:32,271 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:32,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-18 08:44:32,271 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:32,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:32,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:32,281 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:32,281 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:32,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:32,291 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:32,291 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-06-18 08:44:32,659 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-06-18 08:44:32,659 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-06-18 08:44:32,663 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:32,663 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:32,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:32,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-06-18 08:44:32,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:32,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-06-18 08:44:32,687 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:32,689 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-06-18 08:44:32,689 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-06-18 08:44:32,689 [ scc.git] DEBUG requirements.txt | 2 +-
2024-06-18 08:44:32,689 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-06-18 08:44:32,690 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-06-18 08:44:32,690 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-06-18 08:44:32,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:32,862 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:32,897 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:32,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:32,902 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:32,936 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:32,941 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1446abbb0> has no local changes
2024-06-18 08:44:32,941 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:32,949 [ scc.git] DEBUG [detached HEAD 4c7481b] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:32,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:32,950 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:33,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-06-18 08:44:33,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-06-18 08:44:34,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-06-18 08:44:34,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-06-18 08:44:35,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:35,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-06-18 08:44:36,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:36,230 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-06-18 08:44:36,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-06-18 08:44:37,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-06-18 08:44:37,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-06-18 08:44:38,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:38,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-06-18 08:44:39,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:39,079 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-06-18 08:44:39,079 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:39,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-18 08:44:39,080 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:39,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:39,085 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:39,089 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:39,090 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:39,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:39,099 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:39,100 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-06-18 08:44:39,591 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-06-18 08:44:39,591 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-06-18 08:44:39,594 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-06-18 08:44:40,577 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-06-18 08:44:40,577 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-06-18 08:44:40,582 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:40,582 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:40,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:40,586 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-18 08:44:40,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:40,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-18 08:44:40,701 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-06-18 08:44:40,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-06-18 08:44:40,701 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-06-18 08:44:40,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-06-18 08:44:40,701 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:44:40,701 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:44:40,706 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-18 08:44:40,712 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-18 08:44:40,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:40,872 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-06-18 08:44:40,878 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-18 08:44:40,883 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2024-06-18 08:44:40,887 [ scc.config] DEBUG Found github.token
2024-06-18 08:44:40,887 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-06-18 08:44:40,888 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-18 08:44:40,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:40,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-18 08:44:40,913 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-06-18 08:44:40,913 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-06-18 08:44:40,913 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-06-18 08:44:40,913 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:44:40,914 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:44:40,919 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-18 08:44:40,926 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-06-18 08:44:41,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:41,285 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-06-18 08:44:41,291 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-06-18 08:44:41,296 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-06-18 08:44:41,300 [ scc.config] DEBUG Found github.token
2024-06-18 08:44:41,300 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-06-18 08:44:41,300 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:41,335 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:41,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:41,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:41,374 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:41,380 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144f0af40> has no local changes
2024-06-18 08:44:41,380 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:41,388 [ scc.git] DEBUG [detached HEAD d409ffb] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:41,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:41,388 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:41,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-06-18 08:44:42,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-06-18 08:44:42,360 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:44:42,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-06-18 08:44:43,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:43,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:44,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-06-18 08:44:44,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:44,825 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-06-18 08:44:45,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-06-18 08:44:45,315 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:44:45,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-06-18 08:44:46,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:46,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:47,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-06-18 08:44:47,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:47,850 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-06-18 08:44:48,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-06-18 08:44:48,330 [ scc.repo] DEBUG # ... Include label: dependencies
2024-06-18 08:44:48,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-06-18 08:44:49,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:49,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:44:50,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-06-18 08:44:50,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:50,787 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-06-18 08:44:51,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-06-18 08:44:51,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-06-18 08:44:52,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-06-18 08:44:52,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-06-18 08:44:53,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-06-18 08:44:53,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-06-18 08:44:53,601 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:53,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-18 08:44:53,601 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:53,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:53,607 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:53,611 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:53,611 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:53,616 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:53,621 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:53,621 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-06-18 08:44:54,021 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-18 08:44:54,021 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD
2024-06-18 08:44:54,025 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-06-18 08:44:54,402 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-18 08:44:54,402 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD
2024-06-18 08:44:54,406 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-06-18 08:44:54,781 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-06-18 08:44:54,782 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD
2024-06-18 08:44:54,785 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:54,785 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:54,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:54,790 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-06-18 08:44:54,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:54,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-06-18 08:44:54,808 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:54,810 [ scc.git] DEBUG package-lock.json | 12 ++++++++----
2024-06-18 08:44:54,810 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-)
2024-06-18 08:44:54,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:54,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-06-18 08:44:54,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:54,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-06-18 08:44:54,993 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-18 08:44:54,993 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:54,996 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-06-18 08:44:54,996 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-)
2024-06-18 08:44:55,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:55,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-06-18 08:44:55,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:55,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-06-18 08:44:55,410 [ scc.git] DEBUG Auto-merging package-lock.json
2024-06-18 08:44:55,410 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:55,413 [ scc.git] DEBUG package-lock.json | 8 ++++----
2024-06-18 08:44:55,413 [ scc.git] DEBUG package.json | 2 +-
2024-06-18 08:44:55,413 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2024-06-18 08:44:55,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:55,783 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:55,818 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:55,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:55,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:55,857 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:55,863 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144663640> has no local changes
2024-06-18 08:44:55,863 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:55,871 [ scc.git] DEBUG [detached HEAD 0795cee] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:55,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:55,872 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:56,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-06-18 08:44:56,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-06-18 08:44:57,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-06-18 08:44:57,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:44:58,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-06-18 08:44:58,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:44:58,817 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-06-18 08:44:58,817 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:44:58,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-18 08:44:58,817 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:58,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:58,823 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:44:58,827 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:44:58,827 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:44:58,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:44:58,837 [ scc.git] DEBUG Already up to date.
2024-06-18 08:44:58,837 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-06-18 08:44:59,203 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-06-18 08:44:59,203 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-06-18 08:44:59,206 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:44:59,206 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:59,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:59,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-06-18 08:44:59,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:59,221 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-06-18 08:44:59,229 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:44:59,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:44:59,389 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:44:59,425 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:44:59,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:44:59,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:44:59,464 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:44:59,469 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144f0bbe0> has no local changes
2024-06-18 08:44:59,469 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:44:59,476 [ scc.git] DEBUG [detached HEAD 1c3da66] merge master -Dorg -Ssuccess-only
2024-06-18 08:44:59,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:44:59,477 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:44:59,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-06-18 08:45:00,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-06-18 08:45:00,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-06-18 08:45:01,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-06-18 08:45:01,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-06-18 08:45:02,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:45:02,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-06-18 08:45:03,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:45:03,264 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-06-18 08:45:03,264 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:03,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-18 08:45:03,264 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:03,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:03,269 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:03,274 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:03,274 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:03,279 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:03,284 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:03,284 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-06-18 08:45:03,704 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-06-18 08:45:03,704 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-06-18 08:45:03,707 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:03,708 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:03,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:03,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-06-18 08:45:03,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:03,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-06-18 08:45:03,731 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-06-18 08:45:03,732 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:45:03,734 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-06-18 08:45:03,734 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-06-18 08:45:03,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:03,958 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:03,994 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:03,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:03,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:04,034 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:04,040 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa14461a550> has no local changes
2024-06-18 08:45:04,040 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:04,048 [ scc.git] DEBUG [detached HEAD 15eb37a] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:04,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:04,048 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:04,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-06-18 08:45:04,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-06-18 08:45:05,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-06-18 08:45:06,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-06-18 08:45:06,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:45:07,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-06-18 08:45:07,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:45:07,557 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-06-18 08:45:07,557 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:07,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-18 08:45:07,558 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:07,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:07,563 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:07,568 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:07,568 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:07,573 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:07,578 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:07,578 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-06-18 08:45:07,993 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-06-18 08:45:07,993 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-06-18 08:45:07,997 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:07,997 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:07,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:08,002 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-18 08:45:08,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:08,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-18 08:45:08,104 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG Auto-merging setup.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-06-18 08:45:08,104 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:45:08,104 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:45:08,109 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-06-18 08:45:08,115 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-06-18 08:45:08,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:08,275 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-06-18 08:45:08,280 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-06-18 08:45:08,284 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/urls.py
- omero_signup/signup_settings.py
- omero_signup/views.py
- setup.py
--conflicts
2024-06-18 08:45:08,289 [ scc.config] DEBUG Found github.token
2024-06-18 08:45:08,289 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-06-18 08:45:08,289 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:08,324 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:08,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:08,329 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:08,364 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:08,370 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa14468df40> has no local changes
2024-06-18 08:45:08,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:08,377 [ scc.git] DEBUG [detached HEAD b8cd88b] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:08,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:08,378 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:08,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-06-18 08:45:09,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-06-18 08:45:09,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-06-18 08:45:10,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-06-18 08:45:10,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:45:11,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-06-18 08:45:11,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:45:11,657 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-06-18 08:45:11,658 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:11,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-18 08:45:11,658 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:11,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:11,663 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:11,668 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:11,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:11,673 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:11,678 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:11,678 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-06-18 08:45:12,048 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-06-18 08:45:12,049 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-06-18 08:45:12,052 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:12,052 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:12,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:12,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-06-18 08:45:12,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:12,068 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-06-18 08:45:12,080 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-06-18 08:45:12,082 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-06-18 08:45:12,084 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-06-18 08:45:12,085 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-06-18 08:45:12,085 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-06-18 08:45:12,085 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-06-18 08:45:12,085 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-06-18 08:45:12,085 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-06-18 08:45:12,085 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-06-18 08:45:12,085 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-06-18 08:45:12,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:12,248 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:12,283 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:12,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:12,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:12,322 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:12,328 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa14461a730> has no local changes
2024-06-18 08:45:12,328 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:12,336 [ scc.git] DEBUG [detached HEAD 4d57b99] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:12,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:12,337 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:12,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-06-18 08:45:12,688 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:12,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-18 08:45:12,688 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:12,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:12,692 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:12,697 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:12,697 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:12,702 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:12,707 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:12,707 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:12,707 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:12,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:12,711 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:12,746 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:12,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:12,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:12,784 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:12,790 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa14462bb80> has no local changes
2024-06-18 08:45:12,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:12,797 [ scc.git] DEBUG [detached HEAD 41a86d9] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:12,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:12,798 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:13,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-06-18 08:45:13,125 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:13,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-18 08:45:13,125 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:13,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:13,129 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:13,134 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:13,134 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:13,138 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:13,143 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:13,144 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:13,144 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:13,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:13,148 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:13,182 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:13,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:13,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:13,222 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:13,227 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144659d90> has no local changes
2024-06-18 08:45:13,227 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:13,234 [ scc.git] DEBUG [detached HEAD 74b1e79] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:13,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:13,235 [ scc.git] INFO Overriding base-branch from master to main
2024-06-18 08:45:13,235 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:13,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-06-18 08:45:14,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-06-18 08:45:14,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-06-18 08:45:15,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-06-18 08:45:15,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-06-18 08:45:16,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:45:16,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-06-18 08:45:17,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-06-18 08:45:17,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:45:17,694 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-06-18 08:45:17,694 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:17,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-18 08:45:17,695 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:17,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:17,700 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-06-18 08:45:17,704 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:17,704 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-06-18 08:45:17,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-06-18 08:45:17,714 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:17,714 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-06-18 08:45:18,076 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-06-18 08:45:18,076 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-06-18 08:45:18,080 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:18,080 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:18,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:18,084 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-18 08:45:18,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:18,094 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-18 08:45:18,102 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-06-18 08:45:18,102 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-06-18 08:45:18,102 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:45:18,103 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:45:18,108 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-06-18 08:45:18,113 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-06-18 08:45:18,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:18,278 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-06-18 08:45:18,282 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-06-18 08:45:18,287 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-06-18 08:45:18,291 [ scc.config] DEBUG Found github.token
2024-06-18 08:45:18,291 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-06-18 08:45:18,291 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:18,326 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:18,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:18,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:18,365 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:18,370 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa14465eee0> has no local changes
2024-06-18 08:45:18,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:18,378 [ scc.git] DEBUG [detached HEAD 7fe367f] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:18,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:18,378 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:18,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-06-18 08:45:18,717 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:18,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-18 08:45:18,717 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:18,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:18,721 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:18,726 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:18,726 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:18,730 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:18,735 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:18,735 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:18,736 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:18,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:18,740 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:18,774 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:18,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:18,779 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:18,813 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:18,818 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144632e80> has no local changes
2024-06-18 08:45:18,818 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:18,826 [ scc.git] DEBUG [detached HEAD d00ad96] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:18,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:18,826 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:19,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-06-18 08:45:19,161 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:19,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-18 08:45:19,161 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:19,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:19,166 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:19,171 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:19,171 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:19,176 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:19,181 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:19,181 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:19,181 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:19,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:19,185 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:19,221 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:19,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:19,226 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:19,261 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:19,266 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144596400> has no local changes
2024-06-18 08:45:19,266 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:19,273 [ scc.git] DEBUG [detached HEAD 13392c0] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:19,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:19,274 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:19,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-06-18 08:45:20,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-06-18 08:45:20,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-06-18 08:45:21,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-06-18 08:45:21,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:45:22,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-06-18 08:45:22,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:45:22,481 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-06-18 08:45:22,481 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:22,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-18 08:45:22,481 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:22,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:22,487 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-06-18 08:45:22,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:22,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-06-18 08:45:22,496 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-06-18 08:45:22,501 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:22,501 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-06-18 08:45:22,882 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-06-18 08:45:22,882 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-06-18 08:45:22,886 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:22,886 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:22,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:22,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-18 08:45:22,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:22,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-18 08:45:22,910 [ scc.git] DEBUG Auto-merging Dockerfile
2024-06-18 08:45:22,910 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-06-18 08:45:22,910 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:45:22,911 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:45:22,915 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-06-18 08:45:22,922 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-06-18 08:45:23,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:23,085 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-06-18 08:45:23,090 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-06-18 08:45:23,094 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-06-18 08:45:23,099 [ scc.config] DEBUG Found github.token
2024-06-18 08:45:23,099 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-06-18 08:45:23,099 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:23,134 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:23,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:23,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:23,175 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:23,181 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1445dcb80> has no local changes
2024-06-18 08:45:23,181 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:23,189 [ scc.git] DEBUG [detached HEAD b90f3c3] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:23,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:23,189 [ scc.git] INFO Overriding base-branch from master to develop
2024-06-18 08:45:23,190 [ scc.repo] DEBUG ## PRs found:
2024-06-18 08:45:23,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-06-18 08:45:24,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-06-18 08:45:24,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-06-18 08:45:25,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-06-18 08:45:25,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-06-18 08:45:26,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-06-18 08:45:26,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-06-18 08:45:27,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-18 08:45:27,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-06-18 08:45:28,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-06-18 08:45:28,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-06-18 08:45:28,594 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-18 08:45:29,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-06-18 08:45:29,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-06-18 08:45:30,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-06-18 08:45:30,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-06-18 08:45:30,583 [ scc.repo] DEBUG ## Branches found:
2024-06-18 08:45:30,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-18 08:45:30,583 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:30,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:30,589 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-06-18 08:45:30,593 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-06-18 08:45:30,593 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-06-18 08:45:30,598 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-06-18 08:45:30,603 [ scc.git] DEBUG Already up to date.
2024-06-18 08:45:30,603 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-06-18 08:45:30,981 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-06-18 08:45:30,981 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-06-18 08:45:30,984 [ scc.git] DEBUG ## Unique users: []
2024-06-18 08:45:30,985 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:30,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:30,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-18 08:45:30,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:31,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-18 08:45:31,048 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-06-18 08:45:31,049 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-06-18 08:45:31,049 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-06-18 08:45:31,049 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-06-18 08:45:31,054 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-18 08:45:31,059 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-06-18 08:45:31,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:31,223 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-06-18 08:45:31,229 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-06-18 08:45:31,234 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#100](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-06-18 08:45:31,238 [ scc.config] DEBUG Found github.token
2024-06-18 08:45:31,238 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-06-18 08:45:31,238 [ scc.git] DEBUG Calling 'git submodule update'
2024-06-18 08:45:31,274 [ scc.git] DEBUG Get sha1 of %s
2024-06-18 08:45:31,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-06-18 08:45:31,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:31,312 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:31,318 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa144608ee0> has no local changes
2024-06-18 08:45:31,318 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:31,325 [ scc.git] DEBUG [detached HEAD 79647f4] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:31,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:31,326 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-06-18 08:45:31,396 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-06-18 08:45:31,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:31,647 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-06-18 08:45:31,651 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-06-18 08:45:32,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:32,062 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-06-18 08:45:32,066 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-06-18 08:45:32,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:32,477 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-06-18 08:45:32,482 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-06-18 08:45:32,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:32,908 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-06-18 08:45:33,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:33,320 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-06-18 08:45:33,325 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-06-18 08:45:33,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:33,734 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-06-18 08:45:33,739 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-06-18 08:45:34,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:34,151 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-06-18 08:45:34,155 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-06-18 08:45:34,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:34,569 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-06-18 08:45:34,573 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-06-18 08:45:34,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:34,975 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-06-18 08:45:34,979 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-06-18 08:45:35,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:35,388 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-06-18 08:45:35,392 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-06-18 08:45:35,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:35,799 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-06-18 08:45:35,803 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-06-18 08:45:36,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:36,206 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-06-18 08:45:36,211 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-06-18 08:45:36,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:36,632 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-06-18 08:45:37,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:37,039 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-06-18 08:45:37,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:37,435 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-06-18 08:45:37,439 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-06-18 08:45:37,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:37,850 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-06-18 08:45:38,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:38,269 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-06-18 08:45:38,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:38,680 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-06-18 08:45:38,685 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-06-18 08:45:39,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:39,126 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-06-18 08:45:39,130 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-06-18 08:45:39,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:39,534 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-06-18 08:45:39,538 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-06-18 08:45:39,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:39,947 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-06-18 08:45:39,951 [ scc.config] DEBUG Found submodule.scripts.url
2024-06-18 08:45:40,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-06-18 08:45:40,361 [ scc.config] DEBUG Found submodule.scripts.branch
2024-06-18 08:45:40,361 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-06-18 08:45:40,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa145ffbc40> has local changes
2024-06-18 08:45:40,432 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`'
- PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 63 sbesson 'Remove python-future dependency'
- PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
- PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (exclude comment)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 568 will-moore 'Remove numpy from tests_require in setup.py'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#100 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/100/)'
2024-06-18 08:45:40,445 [ scc.git] DEBUG [detached HEAD c01a653] merge master -Dorg -Ssuccess-only
2024-06-18 08:45:40,445 [ scc.merge] INFO Repository: ome/omero-plugins
2024-06-18 08:45:40,445 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
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2024-06-18 08:45:40,445 [ scc.merge] INFO
2024-06-18 08:45:40,445 [ scc.merge] INFO Merged PRs:
2024-06-18 08:45:40,445 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`'
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`'
2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,446 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-06-18 08:45:40,446 [ scc.merge] INFO Already up to date.
2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,446 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-06-18 08:45:40,446 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
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2024-06-18 08:45:40,446 [ scc.merge] INFO
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2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,446 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-06-18 08:45:40,446 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
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2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,446 [ scc.merge] INFO Merged PRs:
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency'
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition'
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password'
2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,446 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-06-18 08:45:40,446 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
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2024-06-18 08:45:40,446 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-06-18 08:45:40,446 [ scc.merge] INFO
2024-06-18 08:45:40,447 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-06-18 08:45:40,447 [ scc.merge] INFO
2024-06-18 08:45:40,447 [ scc.merge] INFO Repository: ome/omero-figure
2024-06-18 08:45:40,447 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment)
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
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2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 549 will-moore 'Inset feature'
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor'
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py'
2024-06-18 08:45:40,447 [ scc.merge] INFO
2024-06-18 08:45:40,447 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-06-18 08:45:40,447 [ scc.merge] INFO Already up to date.
2024-06-18 08:45:40,447 [ scc.merge] INFO
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2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-06-18 08:45:40,447 [ scc.merge] INFO
2024-06-18 08:45:40,447 [ scc.merge] INFO Repository: ome/omero-gallery
2024-06-18 08:45:40,447 [ scc.merge] INFO Already up to date.
2024-06-18 08:45:40,447 [ scc.merge] INFO
2024-06-18 08:45:40,447 [ scc.merge] INFO Merged PRs:
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-06-18 08:45:40,447 [ scc.merge] INFO
2024-06-18 08:45:40,447 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-06-18 08:45:40,447 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
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2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-06-18 08:45:40,447 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-06-18 08:45:40,447 [ scc.merge] INFO
2024-06-18 08:45:40,448 [ scc.merge] INFO Repository: ome/omero-mapr
2024-06-18 08:45:40,448 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-06-18 08:45:40,448 [ scc.merge] INFO Already up to date.
2024-06-18 08:45:40,448 [ scc.merge] INFO
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2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-06-18 08:45:40,448 [ scc.merge] INFO
2024-06-18 08:45:40,448 [ scc.merge] INFO Repository: ome/omero-metadata
2024-06-18 08:45:40,448 [ scc.merge] INFO Already up to date.
2024-06-18 08:45:40,448 [ scc.merge] INFO
2024-06-18 08:45:40,448 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-06-18 08:45:40,448 [ scc.merge] INFO
2024-06-18 08:45:40,448 [ scc.merge] INFO Repository: ome/omero-parade
2024-06-18 08:45:40,448 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
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2024-06-18 08:45:40,448 [ scc.merge] INFO
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2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-06-18 08:45:40,448 [ scc.merge] INFO
2024-06-18 08:45:40,448 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
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2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-06-18 08:45:40,448 [ scc.merge] INFO
2024-06-18 08:45:40,448 [ scc.merge] INFO Repository: ome/omero-rois
2024-06-18 08:45:40,448 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,448 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
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2024-06-18 08:45:40,448 [ scc.merge] INFO
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2024-06-18 08:45:40,449 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-06-18 08:45:40,449 [ scc.merge] INFO
2024-06-18 08:45:40,449 [ scc.merge] INFO Repository: ome/omero-signup
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2024-06-18 08:45:40,449 [ scc.merge] INFO
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2024-06-18 08:45:40,449 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-06-18 08:45:40,449 [ scc.merge] INFO
2024-06-18 08:45:40,449 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
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2024-06-18 08:45:40,449 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-06-18 08:45:40,449 [ scc.merge] INFO
2024-06-18 08:45:40,449 [ scc.merge] INFO Repository: ome/omero-upload
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2024-06-18 08:45:40,449 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
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2024-06-18 08:45:40,449 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
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2024-06-18 08:45:40,449 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
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2024-06-18 08:45:40,449 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
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2024-06-18 08:45:40,449 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
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2024-06-18 08:45:40,450 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-06-18 08:45:40,450 [ scc.merge] INFO Already up to date.
2024-06-18 08:45:40,450 [ scc.merge] INFO
2024-06-18 08:45:40,450 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-18 08:45:40,450 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-06-18 08:45:40,450 [ scc.merge] INFO
2024-06-18 08:45:40,450 [ scc.merge] INFO Repository: ome/scripts
2024-06-18 08:45:40,450 [ scc.merge] INFO Excluded PRs:
2024-06-18 08:45:40,450 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-06-18 08:45:40,450 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-06-18 08:45:40,450 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-06-18 08:45:40,450 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
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2024-06-18 08:45:40,450 [ scc.merge] INFO Conflicting PRs (not included):
2024-06-18 08:45:40,450 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-06-18 08:45:40,450 [ scc.merge] INFO
2024-06-18 08:45:40,450 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-06-18 08:45:40,450 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-06-18 08:45:40,455 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-06-18 08:45:40,460 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-06-18 08:45:40,464 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-06-18 08:45:40,469 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-06-18 08:45:40,473 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-06-18 08:45:40,478 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-06-18 08:45:40,483 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-06-18 08:45:40,487 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-06-18 08:45:40,492 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-06-18 08:45:40,496 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-06-18 08:45:40,501 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-06-18 08:45:40,505 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-06-18 08:45:40,510 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-06-18 08:45:40,514 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-06-18 08:45:40,519 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-06-18 08:45:40,523 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-06-18 08:45:40,528 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-06-18 08:45:40,532 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-06-18 08:45:40,537 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-06-18 08:45:40,541 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-06-18 08:45:40,546 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-06-18 08:45:40,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-06-18 08:45:40,550 [ scc.git] DEBUG Calling 'git remote'
2024-06-18 08:45:40,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
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/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
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WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD b59b4e6] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
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Entering 'omero-cli-render'
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Entering 'omero-figure'
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Entering 'omero-gallery'
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Entering 'omero-iviewer'
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Entering 'omero-mapr'
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Entering 'omero-metadata'
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Entering 'omero-parade'
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Entering 'omero-prometheus-tools'
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Entering 'omero-rois'
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Entering 'omero-signup'
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Entering 'rOMERO-gateway'
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[detached HEAD 7240f73] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-06-18 08:46:28,418 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-06-18 08:46:37,463 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-06-18 08:46:39,869 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-18 08:46:44,525 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-06-18 08:47:33,192 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
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[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS