Started by upstream project "Trigger" build number 118 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision cb61484e15676f5193c68158b2dbf39b585f2360 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Commit message: "Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f" > git rev-list --no-walk cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 106 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.1 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-29 00:44:20,695 [ scc.config] DEBUG Found github.token 2024-06-29 00:44:20,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-29 00:44:20,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:44:21,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:44:21,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-29 00:44:21,731 [ scc.gh] DEBUG 3968 remaining from 5000 (Reset at 01:06 2024-06-29 00:44:21,732 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:21,738 [ scc.git] DEBUG Check current status 2024-06-29 00:44:21,738 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:21,742 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-29 00:44:21,742 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:21,817 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-29 00:44:21,820 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-29 00:44:21,823 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-29 00:44:21,826 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-29 00:44:21,867 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-29 00:44:21,880 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-29 00:44:21,885 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-29 00:44:21,901 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-29 00:44:21,905 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-29 00:44:21,908 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-29 00:44:21,911 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-29 00:44:21,914 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-29 00:44:21,920 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-29 00:44:21,928 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-29 00:44:21,944 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-29 00:44:21,951 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-29 00:44:21,964 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-29 00:44:21,967 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-29 00:44:21,971 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-29 00:44:21,974 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-29 00:44:21,977 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-29 00:44:21,981 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-29 00:44:21,989 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:22,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-29 00:44:22,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:23,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:23,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:24,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:24,043 [ scc.git] DEBUG Resetting... 2024-06-29 00:44:24,043 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-29 00:44:24,053 [ scc.git] DEBUG HEAD is now at cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-29 00:44:24,053 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-29 00:44:24,158 [ scc.git] DEBUG Check current status 2024-06-29 00:44:24,158 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:24,163 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-29 00:44:24,163 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:24,207 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-29 00:44:24,209 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-29 00:44:24,211 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-29 00:44:24,214 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-29 00:44:24,218 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-29 00:44:24,220 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-29 00:44:24,223 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-29 00:44:24,226 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-29 00:44:24,228 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-29 00:44:24,231 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-29 00:44:24,234 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-29 00:44:24,236 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-29 00:44:24,239 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-29 00:44:24,242 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-29 00:44:24,245 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-29 00:44:24,247 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-29 00:44:24,249 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-29 00:44:24,252 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-29 00:44:24,254 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-29 00:44:24,256 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-29 00:44:24,259 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-29 00:44:24,262 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-29 00:44:24,263 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-29 00:44:24,263 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-29 00:44:24,263 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-29 00:44:24,263 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-29 00:44:24,263 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-29 00:44:24,264 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:44:24,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-29 00:44:25,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-29 00:44:25,006 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:44:25,006 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-29 00:44:25,006 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:44:25,006 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:44:25,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:44:25,012 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:44:25,018 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:44:25,019 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:44:25,025 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:44:25,031 [ scc.git] DEBUG Already up to date. 2024-06-29 00:44:25,031 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-29 00:44:25,473 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-29 00:44:25,473 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-29 00:44:25,483 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:44:25,483 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:44:25,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:44:25,489 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-29 00:44:25,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:44:25,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-29 00:44:25,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:44:25,536 [ scc.git] DEBUG scripts | 2 +- 2024-06-29 00:44:25,536 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-29 00:44:25,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:44:25,697 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:44:25,817 [ scc.git] DEBUG Submodule path 'scripts': checked out 'c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-29 00:44:25,818 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:44:25,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:44:25,826 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:44:26,614 [ scc.git] DEBUG has no local changes 2024-06-29 00:44:26,615 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:44:26,715 [ scc.git] DEBUG [detached HEAD f3754ca] merge master -Dorg -Snone 2024-06-29 00:44:26,715 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-29 00:44:26,715 [ scc.merge] INFO Already up to date. 2024-06-29 00:44:26,715 [ scc.merge] INFO 2024-06-29 00:44:26,715 [ scc.merge] INFO Merged PRs: 2024-06-29 00:44:26,715 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-29 00:44:26,715 [ scc.merge] INFO 2024-06-29 00:44:26,716 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-29 00:44:26,716 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-29 00:44:36,351 [ scc.config] DEBUG Found github.token 2024-06-29 00:44:36,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-29 00:44:36,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:44:37,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:44:37,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-29 00:44:37,683 [ scc.gh] DEBUG 3958 remaining from 5000 (Reset at 01:06 2024-06-29 00:44:37,684 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:37,693 [ scc.git] DEBUG Check current status 2024-06-29 00:44:37,693 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:37,699 [ scc.git] DEBUG f3754ca merge master -Dorg -Snone 2024-06-29 00:44:37,699 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:37,756 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-29 00:44:37,759 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-29 00:44:37,763 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-29 00:44:37,766 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-29 00:44:37,771 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-29 00:44:37,775 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-29 00:44:37,780 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-29 00:44:37,786 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-29 00:44:37,789 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-29 00:44:37,793 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-29 00:44:37,796 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-29 00:44:37,799 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-29 00:44:37,803 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-29 00:44:37,806 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-29 00:44:37,810 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-29 00:44:37,814 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-29 00:44:37,817 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-29 00:44:37,821 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-29 00:44:37,824 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-29 00:44:37,827 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-29 00:44:37,831 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-29 00:44:37,834 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-29 00:44:37,841 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:37,841 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-29 00:44:37,844 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-29 00:44:38,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-29 00:44:38,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:39,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:39,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:40,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:40,079 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:40,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-29 00:44:40,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:40,166 [ scc.git] DEBUG Check current status 2024-06-29 00:44:40,166 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:40,169 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-29 00:44:40,170 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:40,213 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:40,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-29 00:44:41,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:41,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:42,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:42,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:42,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:42,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:42,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-29 00:44:42,600 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:42,605 [ scc.git] DEBUG Check current status 2024-06-29 00:44:42,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:42,609 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-29 00:44:42,609 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:42,654 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:43,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-29 00:44:43,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:44,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:44,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:45,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:45,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:45,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:45,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-29 00:44:45,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:45,103 [ scc.git] DEBUG Check current status 2024-06-29 00:44:45,103 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:45,109 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-29 00:44:45,109 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:45,168 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:45,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-29 00:44:46,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:46,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:47,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:47,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:47,471 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:47,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:47,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-29 00:44:47,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:47,524 [ scc.git] DEBUG Check current status 2024-06-29 00:44:47,524 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:47,529 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-29 00:44:47,529 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:47,582 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:47,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-29 00:44:48,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:48,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:49,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:49,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:49,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:49,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:49,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-29 00:44:49,872 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:49,877 [ scc.git] DEBUG Check current status 2024-06-29 00:44:49,877 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:49,895 [ scc.git] DEBUG 9ffbc8b7 Merge pull request #570 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-29 00:44:49,895 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:49,941 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:50,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-29 00:44:50,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:51,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:51,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:52,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:52,271 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:52,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:52,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-29 00:44:52,315 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:52,320 [ scc.git] DEBUG Check current status 2024-06-29 00:44:52,320 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:52,324 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-29 00:44:52,324 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:52,372 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:52,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-29 00:44:53,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:53,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:54,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:54,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:54,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:54,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:54,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-29 00:44:54,725 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:54,729 [ scc.git] DEBUG Check current status 2024-06-29 00:44:54,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:54,734 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-29 00:44:54,734 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:54,774 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:55,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-29 00:44:55,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:56,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:56,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:57,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:57,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:57,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:57,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-29 00:44:57,377 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:57,380 [ scc.git] DEBUG Check current status 2024-06-29 00:44:57,380 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:57,384 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-29 00:44:57,384 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:44:57,428 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:44:57,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-29 00:44:58,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:44:58,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:44:59,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:44:59,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:44:59,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:44:59,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:44:59,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-29 00:44:59,990 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:44:59,994 [ scc.git] DEBUG Check current status 2024-06-29 00:44:59,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:44:59,998 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-29 00:44:59,998 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:00,042 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:00,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-29 00:45:01,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:01,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:02,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:02,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:02,484 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:02,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:02,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-29 00:45:02,527 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:02,531 [ scc.git] DEBUG Check current status 2024-06-29 00:45:02,531 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:02,535 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-29 00:45:02,535 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:02,579 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:03,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-29 00:45:03,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:04,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:04,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:05,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:05,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:05,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:05,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-29 00:45:05,084 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:05,089 [ scc.git] DEBUG Check current status 2024-06-29 00:45:05,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:05,093 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-29 00:45:05,093 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:05,140 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:05,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-29 00:45:06,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:06,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:07,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:07,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:07,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:07,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:07,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-29 00:45:07,632 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:07,637 [ scc.git] DEBUG Check current status 2024-06-29 00:45:07,638 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:07,643 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-29 00:45:07,643 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:07,691 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:08,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-29 00:45:08,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:09,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:09,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:10,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:10,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:10,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:10,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-29 00:45:10,174 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:10,179 [ scc.git] DEBUG Check current status 2024-06-29 00:45:10,179 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:10,184 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-29 00:45:10,184 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:10,232 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:10,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-29 00:45:11,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:11,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:12,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:12,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:12,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:12,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:13,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-29 00:45:13,000 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:13,005 [ scc.git] DEBUG Check current status 2024-06-29 00:45:13,005 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:13,009 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-29 00:45:13,010 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:13,053 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:13,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-29 00:45:14,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:14,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:15,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:15,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:15,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:15,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:15,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-29 00:45:15,623 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:15,631 [ scc.git] DEBUG Check current status 2024-06-29 00:45:15,631 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:15,637 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-29 00:45:15,638 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:15,696 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:16,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-29 00:45:16,110 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-29 00:45:16,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-29 00:45:16,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:17,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:17,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:18,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:18,413 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:18,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:18,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-29 00:45:18,460 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:18,468 [ scc.git] DEBUG Check current status 2024-06-29 00:45:18,468 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:18,473 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-29 00:45:18,473 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:18,536 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:18,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-29 00:45:19,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:19,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:20,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:20,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:20,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:21,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:21,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-29 00:45:21,009 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:21,018 [ scc.git] DEBUG Check current status 2024-06-29 00:45:21,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:21,026 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-29 00:45:21,026 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:21,081 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:21,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-29 00:45:22,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:22,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:23,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:23,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:23,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:23,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:23,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-29 00:45:23,535 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:23,542 [ scc.git] DEBUG Check current status 2024-06-29 00:45:23,542 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:23,549 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-29 00:45:23,549 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:23,600 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:23,601 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-29 00:45:24,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-29 00:45:24,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:25,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:25,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:26,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:26,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:26,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:26,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-29 00:45:26,173 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:26,180 [ scc.git] DEBUG Check current status 2024-06-29 00:45:26,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:26,185 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-29 00:45:26,185 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:26,226 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:26,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-29 00:45:26,592 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-29 00:45:26,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-29 00:45:27,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:27,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:28,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:28,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:28,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:28,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:28,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-29 00:45:28,963 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:28,969 [ scc.git] DEBUG Check current status 2024-06-29 00:45:28,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:28,975 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-29 00:45:28,976 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:29,033 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:29,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-29 00:45:29,420 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-29 00:45:29,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-29 00:45:30,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:30,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:31,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:31,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:31,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:31,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:31,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-29 00:45:31,725 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:31,732 [ scc.git] DEBUG Check current status 2024-06-29 00:45:31,732 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:31,738 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-29 00:45:31,739 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:31,783 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:32,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-29 00:45:32,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:33,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:33,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:34,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:34,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:34,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:34,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-29 00:45:34,264 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-29 00:45:34,270 [ scc.git] DEBUG Check current status 2024-06-29 00:45:34,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:34,290 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-29 00:45:34,291 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:34,335 [ scc.config] DEBUG Found remote.origin.url 2024-06-29 00:45:34,336 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-29 00:45:34,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-29 00:45:34,683 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-29 00:45:34,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-29 00:45:35,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-29 00:45:35,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-29 00:45:36,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-29 00:45:36,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-29 00:45:36,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:36,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:36,906 [ scc.git] DEBUG Resetting... 2024-06-29 00:45:36,906 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-29 00:45:36,917 [ scc.git] DEBUG HEAD is now at f3754ca merge master -Dorg -Snone 2024-06-29 00:45:36,918 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-29 00:45:37,027 [ scc.git] DEBUG Check current status 2024-06-29 00:45:37,027 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-29 00:45:37,033 [ scc.git] DEBUG f3754ca merge master -Dorg -Snone 2024-06-29 00:45:37,034 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-29 00:45:37,087 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-29 00:45:37,090 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-29 00:45:37,093 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-29 00:45:37,096 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-29 00:45:37,100 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-29 00:45:37,103 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-29 00:45:37,106 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-29 00:45:37,109 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-29 00:45:37,112 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-29 00:45:37,115 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-29 00:45:37,117 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-29 00:45:37,120 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-29 00:45:37,123 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-29 00:45:37,126 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-29 00:45:37,130 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-29 00:45:37,132 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-29 00:45:37,135 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-29 00:45:37,137 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-29 00:45:37,140 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-29 00:45:37,142 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-29 00:45:37,145 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-29 00:45:37,149 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-29 00:45:37,150 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-29 00:45:37,150 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-29 00:45:37,150 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-29 00:45:37,150 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-29 00:45:37,150 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-29 00:45:37,150 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-29 00:45:37,150 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:45:37,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-29 00:45:37,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-29 00:45:37,942 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:45:38,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-29 00:45:39,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:45:39,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-29 00:45:40,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/037763f1d0b88b101a1a9631a7570806073a41be?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:45:40,151 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-29 00:45:40,151 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:45:40,151 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:40,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:40,158 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:45:40,162 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:45:40,163 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:45:40,168 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:45:40,174 [ scc.git] DEBUG Already up to date. 2024-06-29 00:45:40,175 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-29 00:45:40,632 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-29 00:45:40,633 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-29 00:45:40,638 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:45:40,638 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:40,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:40,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-29 00:45:40,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:40,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-29 00:45:40,658 [ scc.git] DEBUG Already up to date. 2024-06-29 00:45:40,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:45:40,859 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:45:40,919 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:40,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:40,927 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:45:41,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-29 00:45:41,323 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:45:41,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-29 00:45:41,323 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:41,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:41,328 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:45:41,333 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:45:41,333 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:45:41,338 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:45:41,344 [ scc.git] DEBUG Already up to date. 2024-06-29 00:45:41,344 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:45:41,344 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:41,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:41,349 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:45:41,393 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:41,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:41,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:41,436 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:45:41,442 [ scc.git] DEBUG has no local changes 2024-06-29 00:45:41,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:45:41,450 [ scc.git] DEBUG [detached HEAD 221838c] merge master -Dorg -Ssuccess-only 2024-06-29 00:45:41,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:41,450 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:45:41,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-29 00:45:42,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-29 00:45:42,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-29 00:45:43,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-29 00:45:43,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:45:44,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:45:45,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-29 00:45:45,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:45:45,457 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-29 00:45:45,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-29 00:45:46,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-29 00:45:46,437 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:45:46,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-29 00:45:46,437 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:46,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:46,445 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:45:46,451 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:45:46,452 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:45:46,457 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:45:46,462 [ scc.git] DEBUG Already up to date. 2024-06-29 00:45:46,462 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-29 00:45:46,898 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-29 00:45:46,898 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-29 00:45:46,904 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:45:46,904 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:46,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:46,910 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-29 00:45:46,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:46,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-29 00:45:46,944 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:45:46,947 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-29 00:45:46,947 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-29 00:45:47,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:45:47,174 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:45:47,218 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:45:47,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:45:47,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:45:47,263 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:45:47,270 [ scc.git] DEBUG has no local changes 2024-06-29 00:45:47,270 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:45:47,279 [ scc.git] DEBUG [detached HEAD ef25b4e] merge master -Dorg -Ssuccess-only 2024-06-29 00:45:47,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:45:47,280 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:45:47,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-29 00:45:48,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-29 00:45:48,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-29 00:45:49,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-29 00:45:49,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:45:50,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-29 00:45:50,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:45:50,836 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-29 00:45:51,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-29 00:45:51,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-29 00:45:52,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:45:52,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-29 00:45:53,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:45:53,413 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-29 00:45:53,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-29 00:45:54,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-29 00:45:54,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-29 00:45:55,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-29 00:45:56,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-29 00:45:56,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:45:57,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-29 00:45:57,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:45:57,634 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-29 00:45:58,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-29 00:45:58,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-29 00:45:59,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-29 00:45:59,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-29 00:46:00,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-29 00:46:00,164 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:46:00,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-29 00:46:00,164 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:00,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:00,171 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:46:00,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:46:00,178 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:46:00,185 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:46:00,191 [ scc.git] DEBUG Already up to date. 2024-06-29 00:46:00,192 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-29 00:46:00,644 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-29 00:46:00,644 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-29 00:46:00,652 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-29 00:46:01,197 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-29 00:46:01,197 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-29 00:46:01,205 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-29 00:46:01,642 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-29 00:46:01,643 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-29 00:46:01,649 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:46:01,649 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:01,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:01,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-29 00:46:01,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:01,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-29 00:46:01,702 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:01,705 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-29 00:46:01,705 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-29 00:46:01,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:01,906 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-29 00:46:01,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:01,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-29 00:46:01,964 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-29 00:46:01,965 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:01,969 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-29 00:46:01,969 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-29 00:46:01,969 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-29 00:46:01,969 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-29 00:46:02,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:02,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-29 00:46:02,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:02,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-29 00:46:02,428 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-29 00:46:02,428 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-29 00:46:02,429 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:02,435 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-29 00:46:02,436 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-29 00:46:02,436 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-29 00:46:02,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:02,815 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:46:02,873 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:02,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:02,881 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:46:02,930 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:46:02,940 [ scc.git] DEBUG has no local changes 2024-06-29 00:46:02,940 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:46:02,952 [ scc.git] DEBUG [detached HEAD 958d6ff] merge master -Dorg -Ssuccess-only 2024-06-29 00:46:02,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:46:02,953 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:46:03,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-29 00:46:03,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-29 00:46:04,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-29 00:46:04,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-29 00:46:05,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-29 00:46:05,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:06,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:06,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-29 00:46:07,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:07,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-29 00:46:08,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-29 00:46:08,392 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-29 00:46:08,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-29 00:46:09,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-29 00:46:10,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-29 00:46:10,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-29 00:46:11,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:11,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-29 00:46:12,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:12,148 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-29 00:46:12,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-29 00:46:13,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-29 00:46:13,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-29 00:46:14,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-29 00:46:14,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:15,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-29 00:46:15,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:15,771 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-29 00:46:15,772 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:46:15,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-29 00:46:15,773 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:15,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:15,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:46:15,797 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:46:15,798 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:46:15,808 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:46:15,829 [ scc.git] DEBUG Already up to date. 2024-06-29 00:46:15,830 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-29 00:46:16,324 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-29 00:46:16,326 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-29 00:46:16,351 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-29 00:46:16,887 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-29 00:46:16,888 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-29 00:46:16,899 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-29 00:46:17,430 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-29 00:46:17,431 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-29 00:46:17,442 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:46:17,443 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:17,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:17,459 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-29 00:46:17,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:17,493 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-29 00:46:17,604 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-29 00:46:17,604 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-29 00:46:17,604 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-29 00:46:17,604 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:46:17,604 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:46:17,614 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-29 00:46:17,624 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-29 00:46:17,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:17,810 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-29 00:46:17,822 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-29 00:46:17,838 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-29 00:46:17,848 [ scc.config] DEBUG Found github.token 2024-06-29 00:46:17,849 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-29 00:46:17,849 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-29 00:46:17,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:17,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-29 00:46:17,934 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-29 00:46:17,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-29 00:46:17,935 [ scc.git] DEBUG Auto-merging setup.py 2024-06-29 00:46:17,935 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-29 00:46:17,935 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-29 00:46:17,935 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-29 00:46:17,935 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-29 00:46:17,935 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:46:17,936 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:46:17,944 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-29 00:46:17,952 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-29 00:46:18,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:18,307 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-29 00:46:18,320 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-29 00:46:18,330 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-29 00:46:18,336 [ scc.config] DEBUG Found github.token 2024-06-29 00:46:18,337 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-29 00:46:18,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-29 00:46:18,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:18,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-29 00:46:18,399 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-29 00:46:18,399 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-29 00:46:18,399 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:18,404 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-29 00:46:18,404 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-29 00:46:18,404 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-29 00:46:18,404 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-29 00:46:18,404 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-29 00:46:18,404 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-29 00:46:18,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:18,730 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:46:18,780 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:18,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:18,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:46:18,844 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:46:18,856 [ scc.git] DEBUG has no local changes 2024-06-29 00:46:18,856 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:46:18,869 [ scc.git] DEBUG [detached HEAD 32089f9] merge master -Dorg -Ssuccess-only 2024-06-29 00:46:18,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:46:18,870 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:46:19,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-29 00:46:19,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/572 HTTP/1.1" 200 None 2024-06-29 00:46:20,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/572/comments HTTP/1.1" 200 None 2024-06-29 00:46:20,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2 HTTP/1.1" 200 None 2024-06-29 00:46:21,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:21,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:22,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/055cbba7ea52b6281065a885bcc1adcfe91636f2 HTTP/1.1" 200 None 2024-06-29 00:46:22,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/055cbba7ea52b6281065a885bcc1adcfe91636f2?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:22,954 [ scc.repo] DEBUG - PR 572 sbesson 'Remove the maximum reportlab version from the readme' 2024-06-29 00:46:23,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-06-29 00:46:23,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-06-29 00:46:24,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-29 00:46:25,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:25,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:26,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-29 00:46:26,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:26,679 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-29 00:46:27,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-29 00:46:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-29 00:46:28,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-29 00:46:28,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:29,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:29,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-29 00:46:30,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:30,256 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-29 00:46:30,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-29 00:46:31,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-29 00:46:31,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:32,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:32,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-29 00:46:33,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:33,335 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-29 00:46:33,336 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:46:33,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-29 00:46:33,336 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:33,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:33,349 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:46:33,357 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:46:33,357 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:46:33,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:46:33,374 [ scc.git] DEBUG Already up to date. 2024-06-29 00:46:33,375 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-29 00:46:34,875 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-29 00:46:34,876 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-29 00:46:34,890 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-29 00:46:35,548 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-29 00:46:35,548 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-29 00:46:35,556 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-06-29 00:46:35,944 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-29 00:46:35,945 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-06-29 00:46:35,955 [ scc.git] DEBUG Calling 'git fetch origin pull/572/head' 2024-06-29 00:46:36,424 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-29 00:46:36,425 [ scc.git] DEBUG * branch refs/pull/572/head -> FETCH_HEAD 2024-06-29 00:46:36,430 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:46:36,431 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:36,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:36,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-29 00:46:36,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:36,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-29 00:46:36,642 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-29 00:46:36,652 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-29 00:46:36,652 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-29 00:46:36,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:36,869 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-29 00:46:36,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:36,885 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-29 00:46:37,043 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-29 00:46:37,043 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-29 00:46:37,043 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-29 00:46:37,044 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:37,050 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-29 00:46:37,050 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-29 00:46:37,050 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-29 00:46:37,050 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-29 00:46:37,051 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-29 00:46:37,051 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-29 00:46:37,051 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-29 00:46:37,051 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-29 00:46:37,052 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-29 00:46:37,052 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-29 00:46:37,052 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-29 00:46:37,052 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-29 00:46:37,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:37,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-29 00:46:37,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:37,329 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-29 00:46:37,383 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:37,387 [ scc.git] DEBUG setup.py | 2 +- 2024-06-29 00:46:37,387 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-29 00:46:37,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:37,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...055cbba7ea52b6281065a885bcc1adcfe91636f2' 2024-06-29 00:46:37,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:37,740 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 572 (Remove the maximum reportlab version from the readme) 055cbba7ea52b6281065a885bcc1adcfe91636f2' 2024-06-29 00:46:37,784 [ scc.git] DEBUG Auto-merging README.rst 2024-06-29 00:46:37,785 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:37,788 [ scc.git] DEBUG README.rst | 2 +- 2024-06-29 00:46:37,789 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-29 00:46:38,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:38,202 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:46:38,270 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:38,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:38,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:46:38,317 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:46:38,328 [ scc.git] DEBUG has no local changes 2024-06-29 00:46:38,328 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 572 sbesson 'Remove the maximum reportlab version from the readme' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:46:38,341 [ scc.git] DEBUG [detached HEAD d7d9fc26] merge master -Dorg -Ssuccess-only 2024-06-29 00:46:38,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:46:38,342 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:46:38,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-29 00:46:39,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-29 00:46:39,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-29 00:46:40,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-29 00:46:40,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:41,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-29 00:46:41,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:41,730 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-29 00:46:41,730 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:46:41,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-29 00:46:41,730 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:41,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:41,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:46:41,750 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:46:41,751 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:46:41,760 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:46:41,770 [ scc.git] DEBUG Already up to date. 2024-06-29 00:46:41,771 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-29 00:46:42,185 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-29 00:46:42,186 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-29 00:46:42,190 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:46:42,190 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:42,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:42,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-29 00:46:42,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:42,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-29 00:46:42,248 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-29 00:46:42,249 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:42,252 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-29 00:46:42,252 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-29 00:46:42,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:42,422 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:46:42,478 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:42,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:42,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:46:42,534 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:46:42,545 [ scc.git] DEBUG has no local changes 2024-06-29 00:46:42,546 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:46:42,559 [ scc.git] DEBUG [detached HEAD 19c1c3d] merge master -Dorg -Ssuccess-only 2024-06-29 00:46:42,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:46:42,560 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:46:42,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-29 00:46:43,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-29 00:46:43,422 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:46:44,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-29 00:46:44,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:45,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:45,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-29 00:46:46,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:46,024 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-29 00:46:46,024 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:46:46,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-29 00:46:46,025 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:46,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:46,034 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:46:46,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:46:46,043 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:46:46,053 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:46:46,064 [ scc.git] DEBUG Already up to date. 2024-06-29 00:46:46,064 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-29 00:46:46,477 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-29 00:46:46,478 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-29 00:46:46,484 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:46:46,484 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:46,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:46,493 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-29 00:46:46,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:46,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-29 00:46:46,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:46:46,528 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-29 00:46:46,528 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-29 00:46:46,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:46:46,694 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:46:46,738 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:46:46,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:46:46,746 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:46:46,790 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:46:46,799 [ scc.git] DEBUG has no local changes 2024-06-29 00:46:46,799 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:46:46,809 [ scc.git] DEBUG [detached HEAD 933efd9] merge master -Dorg -Ssuccess-only 2024-06-29 00:46:46,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:46:46,810 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:46:47,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-29 00:46:47,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-06-29 00:46:47,786 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:46:48,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-29 00:46:49,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:49,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:50,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-29 00:46:50,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:50,620 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-29 00:46:51,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-06-29 00:46:51,140 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:46:51,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-29 00:46:52,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:52,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:53,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-29 00:46:53,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:53,963 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-29 00:46:54,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-29 00:46:55,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-29 00:46:55,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-29 00:46:56,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:46:56,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:46:57,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-29 00:46:57,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:46:57,699 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-29 00:46:58,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-29 00:46:58,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-29 00:46:59,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-29 00:46:59,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:00,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:47:00,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-29 00:47:01,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:01,360 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-29 00:47:01,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-29 00:47:02,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-29 00:47:02,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-29 00:47:03,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:03,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-29 00:47:04,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:04,369 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-29 00:47:04,369 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:04,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-29 00:47:04,369 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:04,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:04,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:04,382 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:04,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:04,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:04,461 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:04,461 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-29 00:47:05,035 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-29 00:47:05,036 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-29 00:47:05,042 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-29 00:47:05,988 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-29 00:47:05,988 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-29 00:47:05,996 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-29 00:47:06,445 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-29 00:47:06,446 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-29 00:47:06,452 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-06-29 00:47:06,815 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-29 00:47:06,815 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-06-29 00:47:06,822 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-06-29 00:47:07,199 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-29 00:47:07,199 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-06-29 00:47:07,204 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:07,204 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:07,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:07,210 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-29 00:47:07,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:07,224 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-29 00:47:07,280 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-29 00:47:07,280 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:07,284 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-29 00:47:07,284 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-29 00:47:07,284 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-29 00:47:07,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:07,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-29 00:47:07,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:07,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-29 00:47:07,638 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-29 00:47:07,638 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-29 00:47:07,639 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-29 00:47:07,639 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-29 00:47:07,639 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:07,643 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-29 00:47:07,643 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-29 00:47:07,643 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-29 00:47:07,643 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-29 00:47:07,644 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-29 00:47:07,644 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-29 00:47:07,644 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-29 00:47:07,644 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-29 00:47:07,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:07,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-29 00:47:07,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:07,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-29 00:47:08,059 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-29 00:47:08,060 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:08,063 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-29 00:47:08,063 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-29 00:47:08,063 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-29 00:47:08,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:08,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-29 00:47:08,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:08,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-29 00:47:08,551 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:08,561 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-06-29 00:47:08,561 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-06-29 00:47:08,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:08,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-29 00:47:08,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:08,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-29 00:47:08,939 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-29 00:47:08,940 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:09,242 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:09,289 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:09,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:09,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:09,344 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:09,356 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:09,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:09,369 [ scc.git] DEBUG [detached HEAD 8b223ac] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:09,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:09,369 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:09,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-29 00:47:10,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-29 00:47:10,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-29 00:47:11,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-29 00:47:11,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:12,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:47:12,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-29 00:47:13,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:13,402 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-29 00:47:13,402 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:13,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-29 00:47:13,402 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:13,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:13,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:13,416 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:13,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:13,423 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:13,430 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:13,431 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-29 00:47:13,826 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-29 00:47:13,826 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-29 00:47:13,832 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:13,832 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:13,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:13,840 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-29 00:47:13,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:13,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-29 00:47:13,867 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:13,870 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-29 00:47:13,870 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-29 00:47:13,870 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-29 00:47:13,870 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-29 00:47:13,870 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-29 00:47:13,870 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-29 00:47:14,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:14,081 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:14,122 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:14,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:14,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:14,168 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:14,175 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:14,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:14,184 [ scc.git] DEBUG [detached HEAD 373515a] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:14,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:14,185 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:14,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-29 00:47:15,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-29 00:47:15,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-29 00:47:16,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-29 00:47:16,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:17,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-29 00:47:17,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:17,820 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-29 00:47:18,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-29 00:47:18,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-29 00:47:19,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-29 00:47:19,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:20,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-29 00:47:20,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:20,945 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-29 00:47:20,945 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:20,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-29 00:47:20,945 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:20,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:20,954 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:20,960 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:20,960 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:20,967 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:20,974 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:20,974 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-29 00:47:21,511 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-29 00:47:21,511 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-29 00:47:21,519 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-29 00:47:22,024 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-29 00:47:22,024 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-29 00:47:22,030 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:22,030 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:22,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:22,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-29 00:47:22,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:22,055 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-29 00:47:22,120 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-29 00:47:22,120 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-29 00:47:22,120 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-29 00:47:22,120 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-29 00:47:22,120 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:47:22,121 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:47:22,127 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-29 00:47:22,135 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-29 00:47:22,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:22,325 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-29 00:47:22,334 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-29 00:47:22,342 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-06-29 00:47:22,349 [ scc.config] DEBUG Found github.token 2024-06-29 00:47:22,349 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-29 00:47:22,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-29 00:47:22,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:22,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-29 00:47:22,414 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-29 00:47:22,414 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-29 00:47:22,414 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-29 00:47:22,414 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:47:22,415 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:47:22,422 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-29 00:47:22,432 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-29 00:47:22,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:22,790 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-29 00:47:22,806 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-29 00:47:22,817 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-29 00:47:22,825 [ scc.config] DEBUG Found github.token 2024-06-29 00:47:22,825 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-29 00:47:22,826 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:22,882 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:22,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:22,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:22,946 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:22,957 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:22,957 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:22,973 [ scc.git] DEBUG [detached HEAD 46de245] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:22,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:22,975 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:23,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-29 00:47:23,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-29 00:47:23,894 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:47:24,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-29 00:47:25,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:25,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:47:26,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-29 00:47:26,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:26,530 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-29 00:47:27,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-29 00:47:27,055 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:47:27,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-29 00:47:28,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:28,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:47:29,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-29 00:47:29,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:29,823 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-29 00:47:30,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-29 00:47:30,288 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-29 00:47:30,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-29 00:47:31,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:31,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:47:32,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-29 00:47:32,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:32,857 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-29 00:47:33,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-29 00:47:33,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-29 00:47:34,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-29 00:47:34,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-29 00:47:35,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-29 00:47:35,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-29 00:47:35,845 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:35,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-29 00:47:35,846 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:35,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:35,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:35,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:35,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:35,865 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:35,872 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:35,872 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-29 00:47:36,316 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-29 00:47:36,317 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-29 00:47:36,324 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-29 00:47:36,822 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-29 00:47:36,823 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-29 00:47:36,828 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-29 00:47:37,205 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-29 00:47:37,205 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-29 00:47:37,210 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:37,210 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:37,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:37,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-29 00:47:37,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:37,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-29 00:47:37,243 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:37,246 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-29 00:47:37,246 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-29 00:47:37,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:37,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-29 00:47:37,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:37,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-29 00:47:37,545 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-29 00:47:37,546 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:37,549 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-29 00:47:37,549 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-29 00:47:37,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:37,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-29 00:47:37,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:37,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-29 00:47:38,004 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-29 00:47:38,005 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:38,008 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-29 00:47:38,008 [ scc.git] DEBUG package.json | 2 +- 2024-06-29 00:47:38,008 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-29 00:47:38,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:38,401 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:38,442 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:38,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:38,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:38,494 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:38,501 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:38,502 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:38,512 [ scc.git] DEBUG [detached HEAD a92bb73] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:38,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:38,513 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:38,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-29 00:47:39,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-29 00:47:39,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-29 00:47:40,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:41,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-29 00:47:41,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:41,454 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-29 00:47:41,454 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:41,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-29 00:47:41,454 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:41,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:41,460 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:41,465 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:41,465 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:41,470 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:41,477 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:41,477 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-29 00:47:41,906 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-29 00:47:41,906 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-29 00:47:41,911 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:41,912 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:41,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:41,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-29 00:47:41,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:41,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-29 00:47:41,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:42,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:42,153 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:42,195 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:42,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:42,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:42,247 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:42,253 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:42,254 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:42,262 [ scc.git] DEBUG [detached HEAD f1a6017] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:42,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:42,263 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:42,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-29 00:47:43,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-29 00:47:43,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-29 00:47:44,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-29 00:47:44,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-29 00:47:45,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:45,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-29 00:47:46,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:46,218 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-29 00:47:46,218 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:46,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-29 00:47:46,218 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:46,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:46,227 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:46,238 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:46,239 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:46,248 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:46,259 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:46,259 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-29 00:47:46,706 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-29 00:47:46,706 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-29 00:47:46,712 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:46,712 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:46,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:46,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-29 00:47:46,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:46,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-29 00:47:46,743 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-29 00:47:46,744 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:46,746 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-29 00:47:46,746 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-29 00:47:46,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:46,924 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:46,968 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:46,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:46,975 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:47,015 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:47,022 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:47,022 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:47,031 [ scc.git] DEBUG [detached HEAD fc892ec] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:47,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:47,032 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:47,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-29 00:47:47,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-29 00:47:48,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-29 00:47:48,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-29 00:47:49,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:50,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-29 00:47:50,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:50,495 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-29 00:47:50,495 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:50,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-29 00:47:50,496 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:50,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:50,504 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:50,512 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:50,512 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:50,519 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:50,527 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:50,528 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-29 00:47:50,971 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-29 00:47:50,971 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-29 00:47:50,979 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:50,979 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:50,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:50,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-29 00:47:50,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:51,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-29 00:47:51,081 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG Auto-merging setup.py 2024-06-29 00:47:51,081 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-29 00:47:51,082 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:47:51,084 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:47:51,094 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-29 00:47:51,105 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-29 00:47:51,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:51,328 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-29 00:47:51,336 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-29 00:47:51,344 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py - omero_signup/views.py --conflicts 2024-06-29 00:47:51,350 [ scc.config] DEBUG Found github.token 2024-06-29 00:47:51,351 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-29 00:47:51,351 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:51,391 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:51,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:51,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:51,443 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:51,452 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:51,452 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:51,463 [ scc.git] DEBUG [detached HEAD 9f7f05e] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:51,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:51,464 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:51,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-29 00:47:52,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-29 00:47:52,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-29 00:47:53,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-29 00:47:53,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:47:54,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-29 00:47:54,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:47:54,923 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-29 00:47:54,923 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:54,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-29 00:47:54,923 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:54,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:54,936 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:54,943 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:54,943 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:54,950 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:54,957 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:54,957 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-29 00:47:55,399 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-29 00:47:55,400 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-29 00:47:55,407 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:55,407 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:55,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:55,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-29 00:47:55,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:55,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-29 00:47:55,462 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-29 00:47:55,466 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-29 00:47:55,467 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-29 00:47:55,467 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-29 00:47:55,467 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-29 00:47:55,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-29 00:47:55,470 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-29 00:47:55,470 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-29 00:47:55,471 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-29 00:47:55,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:47:55,682 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:55,749 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:55,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:55,761 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:55,827 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:55,843 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:55,844 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:55,864 [ scc.git] DEBUG [detached HEAD fc08d96] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:55,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:55,865 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:56,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-29 00:47:56,154 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:56,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-29 00:47:56,154 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:56,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:56,162 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:56,168 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:56,168 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:56,175 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:56,182 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:56,183 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:56,183 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:56,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:56,191 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:56,236 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:56,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:56,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:56,302 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:56,315 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:56,315 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:56,328 [ scc.git] DEBUG [detached HEAD 9ed9a96] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:56,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:56,329 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:56,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-29 00:47:56,621 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:47:56,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-29 00:47:56,621 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:56,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:56,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:47:56,635 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:47:56,635 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:47:56,643 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:47:56,651 [ scc.git] DEBUG Already up to date. 2024-06-29 00:47:56,651 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:47:56,652 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:56,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:56,658 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:47:56,703 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:47:56,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:47:56,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:47:56,764 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:47:56,771 [ scc.git] DEBUG has no local changes 2024-06-29 00:47:56,772 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:47:56,781 [ scc.git] DEBUG [detached HEAD bffa6b5] merge master -Dorg -Ssuccess-only 2024-06-29 00:47:56,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:47:56,781 [ scc.git] INFO Overriding base-branch from master to main 2024-06-29 00:47:56,781 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:47:57,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-29 00:47:57,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-29 00:47:58,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-29 00:47:58,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-29 00:47:59,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-29 00:47:59,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:48:00,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-29 00:48:00,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-29 00:48:01,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:48:01,104 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-29 00:48:01,104 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:48:01,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-29 00:48:01,104 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:01,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:01,119 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-29 00:48:01,127 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:48:01,127 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-29 00:48:01,135 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-29 00:48:01,144 [ scc.git] DEBUG Already up to date. 2024-06-29 00:48:01,145 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-29 00:48:01,590 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-29 00:48:01,590 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-29 00:48:01,595 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:48:01,595 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:01,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:01,601 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-29 00:48:01,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:01,616 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-29 00:48:01,645 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-29 00:48:01,647 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-29 00:48:01,649 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:48:01,653 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:48:01,681 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-29 00:48:01,692 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-29 00:48:01,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:01,846 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-29 00:48:01,853 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-29 00:48:01,859 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-29 00:48:01,872 [ scc.config] DEBUG Found github.token 2024-06-29 00:48:01,872 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-29 00:48:01,872 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:48:01,912 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:01,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:01,919 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:48:01,956 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:48:01,962 [ scc.git] DEBUG has no local changes 2024-06-29 00:48:01,962 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:48:01,970 [ scc.git] DEBUG [detached HEAD 366f475] merge master -Dorg -Ssuccess-only 2024-06-29 00:48:01,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:01,971 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:48:02,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-29 00:48:02,273 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:48:02,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-29 00:48:02,273 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:02,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:02,279 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:48:02,284 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:48:02,284 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:48:02,290 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:48:02,296 [ scc.git] DEBUG Already up to date. 2024-06-29 00:48:02,296 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:48:02,296 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:02,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:02,302 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:48:02,341 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:02,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:02,346 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:48:02,392 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:48:02,398 [ scc.git] DEBUG has no local changes 2024-06-29 00:48:02,399 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:48:02,407 [ scc.git] DEBUG [detached HEAD 57f7663] merge master -Dorg -Ssuccess-only 2024-06-29 00:48:02,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:02,407 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:48:02,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-29 00:48:02,711 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:48:02,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-29 00:48:02,711 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:02,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:02,717 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:48:02,722 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:48:02,722 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:48:02,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:48:02,733 [ scc.git] DEBUG Already up to date. 2024-06-29 00:48:02,733 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:48:02,733 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:02,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:02,738 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:48:02,779 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:02,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:02,784 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:48:02,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:48:02,829 [ scc.git] DEBUG has no local changes 2024-06-29 00:48:02,829 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:48:02,838 [ scc.git] DEBUG [detached HEAD 8f28cb4] merge master -Dorg -Ssuccess-only 2024-06-29 00:48:02,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:02,839 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:48:03,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-29 00:48:03,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-29 00:48:04,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-29 00:48:04,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-29 00:48:05,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:48:05,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-29 00:48:06,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:48:06,281 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-29 00:48:06,281 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:48:06,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-29 00:48:06,282 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:06,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:06,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-29 00:48:06,295 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:48:06,296 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-29 00:48:06,302 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-29 00:48:06,307 [ scc.git] DEBUG Already up to date. 2024-06-29 00:48:06,308 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-29 00:48:06,709 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-29 00:48:06,709 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-29 00:48:06,714 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:48:06,715 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:06,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:06,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-29 00:48:06,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:06,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-29 00:48:06,768 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-29 00:48:06,769 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-29 00:48:06,769 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:48:06,769 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:48:06,775 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-29 00:48:06,783 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-29 00:48:06,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:06,984 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-29 00:48:06,991 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-29 00:48:06,997 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-29 00:48:07,002 [ scc.config] DEBUG Found github.token 2024-06-29 00:48:07,003 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-29 00:48:07,003 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:48:07,047 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:07,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:07,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:48:07,100 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:48:07,109 [ scc.git] DEBUG has no local changes 2024-06-29 00:48:07,110 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:48:07,121 [ scc.git] DEBUG [detached HEAD 88ef0d8] merge master -Dorg -Ssuccess-only 2024-06-29 00:48:07,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:07,122 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-29 00:48:07,122 [ scc.repo] DEBUG ## PRs found: 2024-06-29 00:48:07,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-29 00:48:08,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-29 00:48:08,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-29 00:48:09,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-29 00:48:09,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-29 00:48:10,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-29 00:48:10,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-29 00:48:11,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-29 00:48:11,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-29 00:48:12,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-29 00:48:12,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-29 00:48:12,624 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-29 00:48:13,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-29 00:48:13,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-29 00:48:14,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-29 00:48:14,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-29 00:48:14,758 [ scc.repo] DEBUG ## Branches found: 2024-06-29 00:48:14,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-29 00:48:14,759 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:14,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:14,770 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-29 00:48:14,780 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-29 00:48:14,781 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-29 00:48:14,791 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-29 00:48:14,801 [ scc.git] DEBUG Already up to date. 2024-06-29 00:48:14,801 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-29 00:48:15,271 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-29 00:48:15,271 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-29 00:48:15,279 [ scc.git] DEBUG ## Unique users: [] 2024-06-29 00:48:15,279 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:15,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:15,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-29 00:48:15,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:15,320 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-29 00:48:15,361 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-29 00:48:15,362 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-29 00:48:15,362 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-29 00:48:15,363 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-29 00:48:15,379 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-29 00:48:15,394 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-29 00:48:15,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:15,596 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-29 00:48:15,608 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-29 00:48:15,622 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#110](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-29 00:48:15,631 [ scc.config] DEBUG Found github.token 2024-06-29 00:48:15,631 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-29 00:48:15,632 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-29 00:48:15,677 [ scc.git] DEBUG Get sha1 of %s 2024-06-29 00:48:15,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-29 00:48:15,687 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:48:15,730 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:48:15,741 [ scc.git] DEBUG has no local changes 2024-06-29 00:48:15,741 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:48:15,752 [ scc.git] DEBUG [detached HEAD e2f45a7] merge master -Dorg -Ssuccess-only 2024-06-29 00:48:15,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:15,753 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-29 00:48:15,847 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-29 00:48:16,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:16,052 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-29 00:48:16,059 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-29 00:48:16,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:16,513 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-29 00:48:16,521 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-29 00:48:16,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:16,933 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-29 00:48:16,937 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-29 00:48:17,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:17,384 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-29 00:48:17,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:17,823 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-29 00:48:17,828 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-29 00:48:18,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:18,320 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-29 00:48:18,325 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-29 00:48:18,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:18,796 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-29 00:48:18,802 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-29 00:48:19,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:19,244 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-29 00:48:19,252 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-29 00:48:19,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:19,678 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-29 00:48:19,685 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-29 00:48:20,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:20,126 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-29 00:48:20,131 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-29 00:48:20,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:20,583 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-29 00:48:20,588 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-29 00:48:21,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:21,032 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-29 00:48:21,037 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-29 00:48:21,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:21,478 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-29 00:48:21,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:21,945 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-29 00:48:22,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:22,372 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-29 00:48:22,379 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-29 00:48:22,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:22,833 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-29 00:48:23,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:23,288 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-29 00:48:23,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:23,776 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-29 00:48:23,792 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-29 00:48:24,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:24,205 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-29 00:48:24,210 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-29 00:48:24,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:24,646 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-29 00:48:24,652 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-29 00:48:25,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:25,141 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-29 00:48:25,148 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-29 00:48:25,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-29 00:48:25,580 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-29 00:48:25,581 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-29 00:48:25,664 [ scc.git] DEBUG has local changes 2024-06-29 00:48:25,664 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 572 sbesson 'Remove the maximum reportlab version from the readme' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#110 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/110/)' 2024-06-29 00:48:25,679 [ scc.git] DEBUG [detached HEAD ee4f296] merge master -Dorg -Ssuccess-only 2024-06-29 00:48:25,680 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-29 00:48:25,680 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-29 00:48:25,680 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-29 00:48:25,680 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-29 00:48:25,680 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-29 00:48:25,680 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-29 00:48:25,680 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-29 00:48:25,680 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-29 00:48:25,680 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,680 [ scc.merge] INFO 2024-06-29 00:48:25,680 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-29 00:48:25,681 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-29 00:48:25,681 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-29 00:48:25,681 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-29 00:48:25,681 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 572 sbesson 'Remove the maximum reportlab version from the readme' 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-29 00:48:25,681 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-29 00:48:25,681 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,681 [ scc.merge] INFO 2024-06-29 00:48:25,681 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,681 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-29 00:48:25,682 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-29 00:48:25,682 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-29 00:48:25,682 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-29 00:48:25,682 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-29 00:48:25,682 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-29 00:48:25,682 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-29 00:48:25,682 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,682 [ scc.merge] INFO 2024-06-29 00:48:25,682 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-29 00:48:25,682 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,683 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-29 00:48:25,683 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,683 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,683 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-29 00:48:25,683 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Merged PRs: 2024-06-29 00:48:25,683 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,683 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-29 00:48:25,683 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,683 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-29 00:48:25,683 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,683 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-29 00:48:25,684 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-29 00:48:25,684 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-29 00:48:25,684 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Repository: ome/scripts 2024-06-29 00:48:25,684 [ scc.merge] INFO Excluded PRs: 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-29 00:48:25,684 [ scc.merge] INFO Already up to date. 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-29 00:48:25,684 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-29 00:48:25,684 [ scc.merge] INFO 2024-06-29 00:48:25,684 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-29 00:48:25,684 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-29 00:48:25,690 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-29 00:48:25,696 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-29 00:48:25,703 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-29 00:48:25,709 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-29 00:48:25,716 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-29 00:48:25,721 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-29 00:48:25,726 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-29 00:48:25,731 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-29 00:48:25,737 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-29 00:48:25,743 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-29 00:48:25,749 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-29 00:48:25,755 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-29 00:48:25,760 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,766 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-29 00:48:25,766 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-29 00:48:25,773 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-29 00:48:25,779 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-29 00:48:25,785 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-29 00:48:25,790 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-29 00:48:25,795 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-29 00:48:25,800 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-29 00:48:25,805 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-29 00:48:25,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-29 00:48:25,811 [ scc.git] DEBUG Calling 'git remote' 2024-06-29 00:48:25,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 339ca23] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9ffbc8b7 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD 257eebd] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-29 00:49:13,672 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-29 00:49:22,573 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-29 00:49:24,952 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-29 00:49:29,519 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-29 00:50:26,279 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS