Started by upstream project "Trigger" build number 242 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 208 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-09 00:39:55,938 [ scc.config] DEBUG Found github.token 2024-10-09 00:39:55,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-09 00:39:56,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:39:56,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:39:56,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-09 00:39:56,890 [ scc.gh] DEBUG 4650 remaining from 5000 (Reset at 01:10 2024-10-09 00:39:56,890 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:39:56,895 [ scc.git] DEBUG Check current status 2024-10-09 00:39:56,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:39:56,898 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-09 00:39:56,898 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:39:56,945 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-09 00:39:56,947 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-09 00:39:56,951 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-09 00:39:56,954 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-09 00:39:56,958 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-09 00:39:56,961 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-09 00:39:56,963 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-09 00:39:56,966 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-09 00:39:56,969 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-09 00:39:56,972 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-09 00:39:56,974 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-09 00:39:56,977 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-09 00:39:56,979 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-09 00:39:56,982 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-09 00:39:56,985 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-09 00:39:56,987 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-09 00:39:56,990 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-09 00:39:56,992 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-09 00:39:56,994 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-09 00:39:56,997 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-09 00:39:56,999 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-09 00:39:57,002 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-09 00:39:57,006 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:39:57,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-09 00:39:57,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:39:58,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:39:58,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:39:59,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:39:59,052 [ scc.git] DEBUG Resetting... 2024-10-09 00:39:59,052 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-09 00:39:59,061 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-09 00:39:59,062 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-09 00:39:59,159 [ scc.git] DEBUG Check current status 2024-10-09 00:39:59,160 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:39:59,164 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-09 00:39:59,164 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:39:59,212 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-09 00:39:59,215 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-09 00:39:59,217 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-09 00:39:59,220 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-09 00:39:59,225 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-09 00:39:59,227 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-09 00:39:59,230 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-09 00:39:59,233 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-09 00:39:59,235 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-09 00:39:59,239 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-09 00:39:59,241 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-09 00:39:59,244 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-09 00:39:59,247 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-09 00:39:59,249 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-09 00:39:59,253 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-09 00:39:59,255 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-09 00:39:59,257 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-09 00:39:59,260 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-09 00:39:59,262 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-09 00:39:59,265 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-09 00:39:59,267 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-09 00:39:59,271 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-09 00:39:59,272 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-09 00:39:59,272 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-09 00:39:59,272 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-09 00:39:59,272 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-09 00:39:59,272 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-09 00:39:59,272 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:39:59,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-09 00:40:00,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-09 00:40:00,011 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:40:00,012 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-09 00:40:00,012 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:40:00,012 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:40:00,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:40:00,016 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:40:00,020 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:40:00,020 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:40:00,024 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:40:00,028 [ scc.git] DEBUG Already up to date. 2024-10-09 00:40:00,028 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-09 00:40:00,391 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-09 00:40:00,391 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-09 00:40:00,397 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:40:00,397 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:40:00,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:40:00,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-09 00:40:00,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:40:00,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-09 00:40:00,428 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:40:00,430 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-09 00:40:00,430 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-09 00:40:00,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:40:00,585 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:40:00,658 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-09 00:40:00,658 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:40:00,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:40:00,663 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:40:00,858 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4605adcb80> has no local changes 2024-10-09 00:40:00,858 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:40:00,946 [ scc.git] DEBUG [detached HEAD 29d68a5] merge master -Dorg -Snone 2024-10-09 00:40:00,946 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-09 00:40:00,947 [ scc.merge] INFO Already up to date. 2024-10-09 00:40:00,947 [ scc.merge] INFO 2024-10-09 00:40:00,947 [ scc.merge] INFO Merged PRs: 2024-10-09 00:40:00,947 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-09 00:40:00,947 [ scc.merge] INFO 2024-10-09 00:40:00,947 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-09 00:40:00,947 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-09 00:40:08,947 [ scc.config] DEBUG Found github.token 2024-10-09 00:40:08,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-09 00:40:09,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:40:09,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:40:09,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-09 00:40:09,884 [ scc.gh] DEBUG 4640 remaining from 5000 (Reset at 01:10 2024-10-09 00:40:09,884 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:09,889 [ scc.git] DEBUG Check current status 2024-10-09 00:40:09,889 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:09,892 [ scc.git] DEBUG 29d68a5 merge master -Dorg -Snone 2024-10-09 00:40:09,892 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:09,934 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-09 00:40:09,937 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-09 00:40:09,939 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-09 00:40:09,942 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-09 00:40:09,952 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-09 00:40:09,954 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-09 00:40:09,957 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-09 00:40:09,960 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-09 00:40:09,963 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-09 00:40:09,965 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-09 00:40:09,968 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-09 00:40:09,970 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-09 00:40:09,973 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-09 00:40:09,975 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-09 00:40:09,978 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-09 00:40:09,981 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-09 00:40:09,983 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-09 00:40:09,985 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-09 00:40:09,988 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-09 00:40:09,990 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-09 00:40:09,993 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-09 00:40:09,996 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-09 00:40:10,000 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:10,000 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-09 00:40:10,002 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-09 00:40:10,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-09 00:40:10,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:11,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:11,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:12,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:12,061 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:12,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-09 00:40:12,135 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:12,139 [ scc.git] DEBUG Check current status 2024-10-09 00:40:12,139 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:12,142 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-09 00:40:12,142 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:12,182 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:12,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-09 00:40:12,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:13,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:13,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:14,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:14,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:14,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:14,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-09 00:40:14,244 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:14,248 [ scc.git] DEBUG Check current status 2024-10-09 00:40:14,248 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:14,252 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-09 00:40:14,252 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:14,294 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:14,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-09 00:40:15,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:15,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:16,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:16,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:16,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:16,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:16,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-09 00:40:16,501 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:16,505 [ scc.git] DEBUG Check current status 2024-10-09 00:40:16,505 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:16,509 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-09 00:40:16,509 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:16,549 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:16,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-09 00:40:17,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:17,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:18,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:18,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:18,611 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:18,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:18,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-09 00:40:18,651 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:18,655 [ scc.git] DEBUG Check current status 2024-10-09 00:40:18,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:18,659 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-09 00:40:18,660 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:18,697 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:19,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-09 00:40:19,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:19,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:20,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:20,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:20,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:20,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:20,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-09 00:40:20,815 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:20,819 [ scc.git] DEBUG Check current status 2024-10-09 00:40:20,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:20,824 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-09 00:40:20,824 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:20,865 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:21,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-09 00:40:21,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:22,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:22,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:22,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:22,906 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:22,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:22,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-09 00:40:22,946 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:22,950 [ scc.git] DEBUG Check current status 2024-10-09 00:40:22,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:22,954 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-09 00:40:22,954 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:22,992 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:23,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-09 00:40:23,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:24,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:24,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:25,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:25,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:25,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:25,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-09 00:40:25,045 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:25,049 [ scc.git] DEBUG Check current status 2024-10-09 00:40:25,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:25,053 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-09 00:40:25,053 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:25,094 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:25,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-09 00:40:25,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:26,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:26,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:27,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:27,110 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:27,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:27,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-09 00:40:27,147 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:27,151 [ scc.git] DEBUG Check current status 2024-10-09 00:40:27,151 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:27,155 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-09 00:40:27,155 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:27,193 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:27,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-09 00:40:28,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:28,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:28,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:29,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:29,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:29,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:29,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-09 00:40:29,295 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:29,300 [ scc.git] DEBUG Check current status 2024-10-09 00:40:29,300 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:29,304 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-09 00:40:29,304 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:29,344 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:29,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-09 00:40:30,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:30,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:30,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:31,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:31,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:31,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:31,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-09 00:40:31,403 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:31,407 [ scc.git] DEBUG Check current status 2024-10-09 00:40:31,408 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:31,411 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-09 00:40:31,412 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:31,449 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:31,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-09 00:40:32,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:32,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:33,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:33,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:33,532 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:33,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:33,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-09 00:40:33,569 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:33,572 [ scc.git] DEBUG Check current status 2024-10-09 00:40:33,572 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:33,576 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-09 00:40:33,576 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:33,616 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:33,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-09 00:40:34,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:34,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:35,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:35,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:35,694 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:35,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:35,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-09 00:40:35,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:35,738 [ scc.git] DEBUG Check current status 2024-10-09 00:40:35,738 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:35,743 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-09 00:40:35,743 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:35,786 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:36,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-09 00:40:36,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:37,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:37,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:37,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:37,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:37,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:37,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-09 00:40:37,897 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:37,901 [ scc.git] DEBUG Check current status 2024-10-09 00:40:37,901 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:37,906 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-09 00:40:37,906 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:37,951 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:38,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-09 00:40:38,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:39,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:39,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:39,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:39,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:40,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:40,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-09 00:40:40,003 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:40,008 [ scc.git] DEBUG Check current status 2024-10-09 00:40:40,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:40,013 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-09 00:40:40,014 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:40,057 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:40,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-09 00:40:40,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:41,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:41,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:42,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:42,071 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:42,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:42,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-09 00:40:42,110 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:42,114 [ scc.git] DEBUG Check current status 2024-10-09 00:40:42,114 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:42,118 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-09 00:40:42,118 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:42,161 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:42,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-09 00:40:42,463 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-09 00:40:42,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-09 00:40:43,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:43,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:43,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:44,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:44,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:44,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:44,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-09 00:40:44,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:44,396 [ scc.git] DEBUG Check current status 2024-10-09 00:40:44,396 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:44,400 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-09 00:40:44,401 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:44,440 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:44,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-09 00:40:45,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:45,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:46,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:46,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:46,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:46,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:46,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-09 00:40:46,470 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:46,474 [ scc.git] DEBUG Check current status 2024-10-09 00:40:46,474 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:46,478 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-09 00:40:46,478 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:46,519 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:46,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-09 00:40:47,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:47,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:48,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:48,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:48,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:48,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:48,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-09 00:40:48,620 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:48,625 [ scc.git] DEBUG Check current status 2024-10-09 00:40:48,625 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:48,630 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-09 00:40:48,630 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:48,676 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:48,677 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-09 00:40:49,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-09 00:40:49,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:49,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:50,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:50,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:50,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:50,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:50,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-09 00:40:50,769 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:50,775 [ scc.git] DEBUG Check current status 2024-10-09 00:40:50,775 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:50,780 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-09 00:40:50,781 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:50,826 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:51,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-09 00:40:51,135 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-09 00:40:51,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-09 00:40:51,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:52,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:52,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:53,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:53,039 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:53,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:53,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-09 00:40:53,080 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:53,085 [ scc.git] DEBUG Check current status 2024-10-09 00:40:53,085 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:53,090 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-09 00:40:53,090 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:53,130 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:53,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-09 00:40:53,446 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-09 00:40:53,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-09 00:40:54,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:54,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:54,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:55,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:55,296 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:55,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:55,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-09 00:40:55,336 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:55,341 [ scc.git] DEBUG Check current status 2024-10-09 00:40:55,341 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:55,345 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-09 00:40:55,345 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:55,386 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:55,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-09 00:40:56,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:56,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:56,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:57,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:57,391 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:57,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:57,432 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-09 00:40:57,432 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-09 00:40:57,436 [ scc.git] DEBUG Check current status 2024-10-09 00:40:57,437 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:57,441 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-09 00:40:57,441 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:57,485 [ scc.config] DEBUG Found remote.origin.url 2024-10-09 00:40:57,486 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-09 00:40:57,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-09 00:40:57,782 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-09 00:40:57,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-09 00:40:58,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-09 00:40:58,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-09 00:40:59,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-09 00:40:59,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-09 00:40:59,663 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:40:59,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:40:59,704 [ scc.git] DEBUG Resetting... 2024-10-09 00:40:59,704 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-09 00:40:59,714 [ scc.git] DEBUG HEAD is now at 29d68a5 merge master -Dorg -Snone 2024-10-09 00:40:59,714 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-09 00:40:59,813 [ scc.git] DEBUG Check current status 2024-10-09 00:40:59,813 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-09 00:40:59,818 [ scc.git] DEBUG 29d68a5 merge master -Dorg -Snone 2024-10-09 00:40:59,819 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-09 00:40:59,865 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-09 00:40:59,867 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-09 00:40:59,870 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-09 00:40:59,872 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-09 00:40:59,882 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-09 00:40:59,884 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-09 00:40:59,886 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-09 00:40:59,889 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-09 00:40:59,892 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-09 00:40:59,895 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-09 00:40:59,897 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-09 00:40:59,899 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-09 00:40:59,902 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-09 00:40:59,905 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-09 00:40:59,908 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-09 00:40:59,910 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-09 00:40:59,912 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-09 00:40:59,915 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-09 00:40:59,917 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-09 00:40:59,920 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-09 00:40:59,922 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-09 00:40:59,925 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-09 00:40:59,926 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-09 00:40:59,927 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-09 00:40:59,927 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-09 00:40:59,927 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-09 00:40:59,927 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-09 00:40:59,927 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-09 00:40:59,927 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:00,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-09 00:41:00,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-09 00:41:00,681 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:41:01,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-09 00:41:01,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:02,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-09 00:41:03,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:03,371 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-09 00:41:03,372 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:03,372 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:03,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:03,377 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:03,382 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:03,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:03,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:03,395 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:03,395 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-09 00:41:03,732 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-09 00:41:03,732 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-09 00:41:03,737 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:41:03,738 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:03,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:03,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-09 00:41:03,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:03,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-09 00:41:03,757 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:03,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:03,890 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:41:03,938 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:03,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:03,944 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:04,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-09 00:41:04,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-09 00:41:05,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-09 00:41:05,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:06,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:06,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-09 00:41:07,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:07,285 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-09 00:41:07,285 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:07,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-09 00:41:07,285 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:07,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:07,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:07,296 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:07,296 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:07,302 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:07,308 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:07,308 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-09 00:41:07,603 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-09 00:41:07,603 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-09 00:41:07,608 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:41:07,608 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:07,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:07,613 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-09 00:41:07,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:07,625 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-09 00:41:07,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:07,638 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-09 00:41:07,638 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-09 00:41:07,638 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-09 00:41:07,638 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-09 00:41:07,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:07,772 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:41:07,811 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:07,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:07,816 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:41:07,855 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:41:07,862 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea238f1e50> has no local changes 2024-10-09 00:41:07,862 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:41:07,871 [ scc.git] DEBUG [detached HEAD 8f4a0ec] merge master -Dorg -Ssuccess-only 2024-10-09 00:41:07,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:41:07,871 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:08,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-09 00:41:08,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-09 00:41:09,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-09 00:41:09,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-09 00:41:10,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:10,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:11,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-09 00:41:12,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:12,126 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-09 00:41:12,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-09 00:41:13,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-09 00:41:13,074 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:13,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-09 00:41:13,075 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:13,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:13,080 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:13,085 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:13,085 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:13,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:13,095 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:13,095 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-09 00:41:13,404 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-09 00:41:13,405 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-09 00:41:13,409 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:41:13,409 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:13,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:13,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-09 00:41:13,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:13,423 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-09 00:41:13,432 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:13,434 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-09 00:41:13,434 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-09 00:41:13,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:13,573 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:41:13,611 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:13,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:13,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:41:13,653 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:41:13,659 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea21b1be20> has no local changes 2024-10-09 00:41:13,659 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:41:13,667 [ scc.git] DEBUG [detached HEAD 86f21dd] merge master -Dorg -Ssuccess-only 2024-10-09 00:41:13,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:41:13,667 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:14,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-09 00:41:14,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-09 00:41:15,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-09 00:41:15,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-09 00:41:15,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-09 00:41:16,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-09 00:41:16,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:17,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-09 00:41:17,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:17,848 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-09 00:41:18,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-09 00:41:18,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-09 00:41:19,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-09 00:41:19,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-09 00:41:20,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-09 00:41:20,156 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:20,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-09 00:41:20,157 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:20,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:20,163 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:20,168 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:20,168 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:20,173 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:20,179 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:20,179 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-09 00:41:20,477 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-09 00:41:20,477 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-09 00:41:20,482 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:41:20,482 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:20,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:20,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-09 00:41:20,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:20,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-09 00:41:20,508 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-09 00:41:20,509 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:20,512 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-09 00:41:20,512 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-09 00:41:20,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:20,638 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:41:20,675 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:20,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:20,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:41:20,718 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:41:20,725 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea21b3dd00> has no local changes 2024-10-09 00:41:20,725 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:41:20,734 [ scc.git] DEBUG [detached HEAD 4b39f05] merge master -Dorg -Ssuccess-only 2024-10-09 00:41:20,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:41:20,735 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:21,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-09 00:41:21,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-09 00:41:22,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-09 00:41:22,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-09 00:41:23,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-09 00:41:23,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:24,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:24,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-09 00:41:24,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:25,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-09 00:41:25,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-09 00:41:25,728 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-09 00:41:26,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-09 00:41:26,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-09 00:41:27,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-09 00:41:27,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-09 00:41:28,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:28,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-09 00:41:29,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:29,115 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-09 00:41:29,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-09 00:41:30,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-09 00:41:30,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-09 00:41:31,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:31,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-09 00:41:32,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:32,040 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-09 00:41:32,040 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:32,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-09 00:41:32,041 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:32,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:32,047 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:32,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:32,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:32,059 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:32,065 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:32,065 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-09 00:41:32,368 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-09 00:41:32,368 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-09 00:41:32,372 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-09 00:41:32,700 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-09 00:41:32,701 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-09 00:41:32,705 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-09 00:41:32,997 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-09 00:41:32,997 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-09 00:41:33,002 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:41:33,002 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:33,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:33,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-09 00:41:33,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:33,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-09 00:41:33,039 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-09 00:41:33,040 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-09 00:41:33,040 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-09 00:41:33,040 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:41:33,040 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:41:33,048 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-09 00:41:33,055 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-09 00:41:33,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:33,182 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-09 00:41:33,191 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-09 00:41:33,197 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-09 00:41:33,203 [ scc.config] DEBUG Found github.token 2024-10-09 00:41:33,203 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-09 00:41:33,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-09 00:41:33,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:33,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-09 00:41:33,227 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-09 00:41:33,227 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-09 00:41:33,227 [ scc.git] DEBUG Auto-merging setup.py 2024-10-09 00:41:33,227 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-09 00:41:33,227 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-09 00:41:33,227 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-09 00:41:33,227 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-09 00:41:33,227 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:41:33,227 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:41:33,233 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-09 00:41:33,239 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-09 00:41:33,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:33,560 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-09 00:41:33,567 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-09 00:41:33,573 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-10-09 00:41:33,578 [ scc.config] DEBUG Found github.token 2024-10-09 00:41:33,578 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-09 00:41:33,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-09 00:41:33,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:33,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-09 00:41:33,601 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-09 00:41:33,601 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-09 00:41:33,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:33,604 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-09 00:41:33,604 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-09 00:41:33,604 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-09 00:41:33,604 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-09 00:41:33,604 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-09 00:41:33,605 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-09 00:41:33,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:33,949 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:41:33,991 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:33,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:33,996 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:41:34,035 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:41:34,041 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea21b3feb0> has no local changes 2024-10-09 00:41:34,042 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:41:34,050 [ scc.git] DEBUG [detached HEAD c7dcf2a] merge master -Dorg -Ssuccess-only 2024-10-09 00:41:34,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:41:34,050 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:34,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-09 00:41:34,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-09 00:41:35,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-09 00:41:35,398 [ scc.repo] DEBUG # ... Include label: include 2024-10-09 00:41:35,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b0e80ac8018b15e59d79752c8ce70a20136267dd HTTP/1.1" 200 None 2024-10-09 00:41:36,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b0e80ac8018b15e59d79752c8ce70a20136267dd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:36,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b0e80ac8018b15e59d79752c8ce70a20136267dd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:37,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b0e80ac8018b15e59d79752c8ce70a20136267dd HTTP/1.1" 200 None 2024-10-09 00:41:37,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b0e80ac8018b15e59d79752c8ce70a20136267dd?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:37,688 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-09 00:41:38,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-09 00:41:38,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-09 00:41:39,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-09 00:41:39,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:39,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:40,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-09 00:41:40,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:40,830 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-09 00:41:41,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-09 00:41:41,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-09 00:41:42,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-09 00:41:42,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-09 00:41:42,712 [ scc.repo] DEBUG # ... Include label: include 2024-10-09 00:41:43,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275 HTTP/1.1" 200 None 2024-10-09 00:41:43,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:44,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:44,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275 HTTP/1.1" 200 None 2024-10-09 00:41:45,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/126a5ccc667b4fbcf9742460482bfc02cd918275?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:45,107 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-09 00:41:45,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-10-09 00:41:46,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579/comments HTTP/1.1" 200 None 2024-10-09 00:41:46,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-09 00:41:46,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-09 00:41:47,003 [ scc.repo] DEBUG # ... Include label: include 2024-10-09 00:41:47,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-09 00:41:48,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:48,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:48,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-09 00:41:49,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b59d9ee6c7ca24182d05a069fe1db887459bf63f?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:49,489 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-09 00:41:50,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-09 00:41:50,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-09 00:41:51,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-09 00:41:51,104 [ scc.repo] DEBUG # ... Include label: include 2024-10-09 00:41:51,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-09 00:41:52,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:52,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:41:52,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-09 00:41:53,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15353812686b3ac466fc705d017bd8b9a8b25aab?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:53,407 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-09 00:41:53,407 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:53,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-09 00:41:53,408 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:53,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:53,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:53,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:53,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:53,427 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:53,432 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:53,433 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-09 00:41:53,748 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-09 00:41:53,748 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-09 00:41:53,754 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-09 00:41:54,082 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-09 00:41:54,082 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-09 00:41:54,088 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-09 00:41:54,392 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-09 00:41:54,393 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-09 00:41:54,398 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-09 00:41:54,693 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-09 00:41:54,693 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-09 00:41:54,699 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-09 00:41:54,998 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-09 00:41:54,999 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-09 00:41:55,005 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:41:55,005 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:55,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:55,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-09 00:41:55,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:55,027 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-09 00:41:55,053 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-09 00:41:55,054 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-09 00:41:55,054 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-09 00:41:55,054 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-10-09 00:41:55,054 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-09 00:41:55,054 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-10-09 00:41:55,054 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:41:55,054 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:41:55,061 [ scc.git] DEBUG Calling 'git reset --hard 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-09 00:41:55,072 [ scc.git] DEBUG HEAD is now at 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-09 00:41:55,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:55,214 [ scc.git] DEBUG Calling 'git merge-base 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-09 00:41:55,225 [ scc.git] DEBUG Calling 'git diff --name-only 8a70fe9af1be66b86f098e153c6baa65a2fc5d72..1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-09 00:41:55,233 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-10-09 00:41:55,239 [ scc.config] DEBUG Found github.token 2024-10-09 00:41:55,239 [ scc.git] DEBUG Not adding comment to issue #577, already --conflicts. 2024-10-09 00:41:55,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-09 00:41:55,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:55,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-09 00:41:55,280 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-09 00:41:55,280 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-09 00:41:55,281 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-09 00:41:55,281 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:55,287 [ scc.git] DEBUG .gitignore | 2 + 2024-10-09 00:41:55,288 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-09 00:41:55,288 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-09 00:41:55,288 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-09 00:41:55,288 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-09 00:41:55,288 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-09 00:41:55,288 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-10-09 00:41:55,288 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-09 00:41:55,288 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-10-09 00:41:55,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:55,606 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...126a5ccc667b4fbcf9742460482bfc02cd918275' 2024-10-09 00:41:55,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:55,621 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 126a5ccc667b4fbcf9742460482bfc02cd918275' 2024-10-09 00:41:55,640 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:55,644 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-09 00:41:55,644 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-09 00:41:55,644 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-09 00:41:55,644 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-09 00:41:55,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:55,984 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-09 00:41:55,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:55,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-09 00:41:56,018 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:56,022 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-09 00:41:56,022 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-09 00:41:56,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:56,357 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b0e80ac8018b15e59d79752c8ce70a20136267dd' 2024-10-09 00:41:56,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:56,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) b0e80ac8018b15e59d79752c8ce70a20136267dd' 2024-10-09 00:41:56,403 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-09 00:41:56,403 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-09 00:41:56,403 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-09 00:41:56,403 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-09 00:41:56,403 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:41:56,410 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-09 00:41:56,410 [ scc.git] DEBUG package.json | 2 +- 2024-10-09 00:41:56,410 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-09 00:41:56,410 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-10-09 00:41:56,410 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-09 00:41:56,410 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-09 00:41:56,410 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-09 00:41:56,410 [ scc.git] DEBUG 7 files changed, 61 insertions(+), 33 deletions(-) 2024-10-09 00:41:56,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:41:56,736 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:41:56,776 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:56,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:56,782 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:41:56,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:41:56,830 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea21b42880> has no local changes 2024-10-09 00:41:56,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:41:56,844 [ scc.git] DEBUG [detached HEAD 2c80983b] merge master -Dorg -Ssuccess-only 2024-10-09 00:41:56,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:41:56,844 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:41:57,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-09 00:41:57,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-09 00:41:58,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-09 00:41:58,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-09 00:41:59,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:41:59,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-09 00:41:59,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:41:59,839 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-09 00:41:59,839 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:41:59,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-09 00:41:59,839 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:41:59,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:41:59,845 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:41:59,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:41:59,850 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:41:59,855 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:41:59,860 [ scc.git] DEBUG Already up to date. 2024-10-09 00:41:59,860 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-09 00:42:00,175 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-09 00:42:00,175 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-09 00:42:00,180 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:42:00,180 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:00,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:00,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-09 00:42:00,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:00,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-09 00:42:00,210 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-09 00:42:00,211 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:00,214 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-09 00:42:00,214 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-09 00:42:00,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:00,342 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:42:00,383 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:00,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:00,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:42:00,428 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:42:00,435 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea21b099d0> has no local changes 2024-10-09 00:42:00,435 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:42:00,442 [ scc.git] DEBUG [detached HEAD 068fdca] merge master -Dorg -Ssuccess-only 2024-10-09 00:42:00,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:42:00,443 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:42:00,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-09 00:42:01,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-09 00:42:01,267 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:01,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-09 00:42:02,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:02,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:03,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-09 00:42:03,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:03,768 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-09 00:42:03,768 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:42:03,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-09 00:42:03,768 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:03,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:03,774 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:42:03,779 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:42:03,780 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:42:03,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:42:03,793 [ scc.git] DEBUG Already up to date. 2024-10-09 00:42:03,793 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-09 00:42:04,124 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-09 00:42:04,124 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-09 00:42:04,129 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:42:04,129 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:04,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:04,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-09 00:42:04,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:04,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-09 00:42:04,158 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:04,162 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-09 00:42:04,162 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-09 00:42:04,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:04,292 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:42:04,337 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:04,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:04,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:42:04,383 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:42:04,390 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea202bbf10> has no local changes 2024-10-09 00:42:04,390 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:42:04,399 [ scc.git] DEBUG [detached HEAD 926e83f] merge master -Dorg -Ssuccess-only 2024-10-09 00:42:04,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:42:04,400 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:42:05,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-09 00:42:05,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-09 00:42:06,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-09 00:42:06,016 [ scc.repo] DEBUG # ... Include label: include 2024-10-09 00:42:06,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-09 00:42:06,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:07,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:08,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-09 00:42:08,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/68b90aebf749c074bde218ba36d3ce662068cd05?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:08,405 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-09 00:42:08,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-09 00:42:08,890 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:09,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-09 00:42:09,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:10,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:10,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-09 00:42:11,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:11,272 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-09 00:42:11,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-09 00:42:12,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-09 00:42:12,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-09 00:42:13,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:13,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:14,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-09 00:42:14,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:14,463 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-09 00:42:14,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-10-09 00:42:15,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-09 00:42:15,383 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:15,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-09 00:42:16,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:16,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:17,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-09 00:42:17,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:17,900 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-09 00:42:18,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-09 00:42:18,340 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:18,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-09 00:42:19,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:19,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:20,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-09 00:42:20,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:20,777 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-09 00:42:21,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-09 00:42:21,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-09 00:42:22,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-09 00:42:22,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:23,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:23,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-09 00:42:23,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:23,908 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-09 00:42:24,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-09 00:42:24,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-09 00:42:25,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-09 00:42:25,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:26,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:26,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-09 00:42:27,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:27,117 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-09 00:42:27,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-09 00:42:27,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-09 00:42:28,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-09 00:42:28,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:29,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-09 00:42:29,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:29,809 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-09 00:42:29,810 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:42:29,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-09 00:42:29,810 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:29,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:29,816 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:42:29,820 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:42:29,820 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:42:29,825 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:42:29,831 [ scc.git] DEBUG Already up to date. 2024-10-09 00:42:29,831 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-09 00:42:30,148 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:30,148 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-09 00:42:30,153 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-09 00:42:30,461 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:30,461 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-09 00:42:30,466 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-09 00:42:30,765 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:30,765 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-09 00:42:30,770 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-09 00:42:31,053 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:31,053 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-09 00:42:31,057 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-09 00:42:31,350 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:31,350 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-09 00:42:31,355 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-09 00:42:31,643 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:31,644 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-09 00:42:31,648 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-09 00:42:31,928 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:31,928 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-09 00:42:31,933 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-09 00:42:32,219 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-09 00:42:32,219 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-09 00:42:32,224 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:42:32,224 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:32,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:32,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-09 00:42:32,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:32,240 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-09 00:42:32,252 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-09 00:42:32,253 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:32,256 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-09 00:42:32,256 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-09 00:42:32,256 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-09 00:42:32,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:32,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-09 00:42:32,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:32,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-09 00:42:32,416 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-09 00:42:32,416 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-09 00:42:32,416 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-09 00:42:32,417 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-09 00:42:32,417 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:32,421 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-09 00:42:32,421 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-09 00:42:32,421 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-09 00:42:32,421 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-09 00:42:32,421 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-09 00:42:32,421 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-09 00:42:32,421 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-09 00:42:32,421 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-09 00:42:32,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:32,766 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-09 00:42:32,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:32,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-09 00:42:32,791 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-09 00:42:32,792 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:32,794 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-09 00:42:32,794 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-09 00:42:32,794 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-09 00:42:33,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:33,142 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-09 00:42:33,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:33,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-09 00:42:33,168 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:33,177 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-09 00:42:33,177 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-09 00:42:33,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:33,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-09 00:42:33,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:33,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-09 00:42:33,589 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-09 00:42:33,589 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:33,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:33,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-09 00:42:33,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:33,939 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-09 00:42:33,960 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-09 00:42:33,960 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-09 00:42:33,960 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-09 00:42:33,960 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:33,965 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-09 00:42:33,965 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-09 00:42:33,965 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-09 00:42:33,965 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-09 00:42:33,965 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-09 00:42:33,965 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-09 00:42:33,965 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-09 00:42:34,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:34,341 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-09 00:42:34,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:34,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-09 00:42:34,392 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-09 00:42:34,393 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:34,403 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-09 00:42:34,403 [ scc.git] DEBUG package.json | 2 +- 2024-10-09 00:42:34,403 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-09 00:42:34,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:34,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-09 00:42:34,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:34,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-09 00:42:34,811 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:34,814 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-09 00:42:34,814 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-09 00:42:35,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:35,159 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:42:35,200 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:35,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:35,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:42:35,245 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:42:35,255 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea202be8e0> has no local changes 2024-10-09 00:42:35,255 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:42:35,267 [ scc.git] DEBUG [detached HEAD cf8ca35] merge master -Dorg -Ssuccess-only 2024-10-09 00:42:35,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:42:35,267 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:42:35,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-09 00:42:36,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-09 00:42:36,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-09 00:42:37,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-09 00:42:37,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:37,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:38,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-09 00:42:38,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-09 00:42:39,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-09 00:42:39,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:40,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-09 00:42:40,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:40,628 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-09 00:42:40,628 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:42:40,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-09 00:42:40,629 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:40,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:40,635 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:42:40,641 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:42:40,641 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:42:40,646 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:42:40,652 [ scc.git] DEBUG Already up to date. 2024-10-09 00:42:40,652 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-09 00:42:40,986 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-09 00:42:40,986 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-09 00:42:40,991 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:42:40,991 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:40,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:40,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-09 00:42:41,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:41,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-09 00:42:41,019 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:41,022 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-09 00:42:41,022 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-09 00:42:41,022 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-09 00:42:41,022 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-09 00:42:41,022 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-09 00:42:41,022 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-09 00:42:41,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:41,152 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:42:41,193 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:41,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:41,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:42:41,237 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:42:41,245 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea202beb20> has no local changes 2024-10-09 00:42:41,245 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:42:41,254 [ scc.git] DEBUG [detached HEAD f3b4da0] merge master -Dorg -Ssuccess-only 2024-10-09 00:42:41,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:42:41,254 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:42:41,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-09 00:42:42,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-09 00:42:42,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-09 00:42:43,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-09 00:42:43,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:43,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-09 00:42:44,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:44,380 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-09 00:42:44,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-09 00:42:45,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-09 00:42:45,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-09 00:42:46,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:46,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-09 00:42:47,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:47,219 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-09 00:42:47,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-09 00:42:48,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-09 00:42:48,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-09 00:42:49,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:49,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-09 00:42:49,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:49,957 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-09 00:42:49,957 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:42:49,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-09 00:42:49,958 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:49,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:49,964 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:42:49,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:42:49,970 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:42:49,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:42:49,981 [ scc.git] DEBUG Already up to date. 2024-10-09 00:42:49,982 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-09 00:42:50,302 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-09 00:42:50,302 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-09 00:42:50,307 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-09 00:42:50,615 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-09 00:42:50,615 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-09 00:42:50,619 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-09 00:42:50,914 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-09 00:42:50,915 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-09 00:42:50,918 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:42:50,919 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:50,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:50,924 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-09 00:42:50,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:50,935 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-09 00:42:50,949 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-09 00:42:50,950 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-09 00:42:50,950 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-09 00:42:50,950 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-09 00:42:50,950 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:42:50,951 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:42:50,956 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-09 00:42:50,963 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-09 00:42:51,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:51,092 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-09 00:42:51,099 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-09 00:42:51,104 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-09 00:42:51,109 [ scc.config] DEBUG Found github.token 2024-10-09 00:42:51,109 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-09 00:42:51,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-09 00:42:51,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:51,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-09 00:42:51,135 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-09 00:42:51,135 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-09 00:42:51,135 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-09 00:42:51,135 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:42:51,135 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:42:51,141 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-09 00:42:51,148 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-09 00:42:51,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:51,478 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-09 00:42:51,485 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-09 00:42:51,491 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-09 00:42:51,496 [ scc.config] DEBUG Found github.token 2024-10-09 00:42:51,496 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-09 00:42:51,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-09 00:42:51,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:51,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-09 00:42:51,517 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:42:51,519 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-09 00:42:51,519 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-09 00:42:51,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:42:51,851 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:42:51,892 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:42:51,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:42:51,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:42:51,939 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:42:51,947 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea202b5f40> has no local changes 2024-10-09 00:42:51,947 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:42:51,957 [ scc.git] DEBUG [detached HEAD 3f7685f] merge master -Dorg -Ssuccess-only 2024-10-09 00:42:51,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:42:51,958 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:42:52,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-09 00:42:52,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-09 00:42:52,865 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:53,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-09 00:42:53,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:54,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:54,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-09 00:42:55,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:55,385 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-09 00:42:55,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-09 00:42:55,836 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:56,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-09 00:42:56,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:42:57,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:42:57,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-09 00:42:58,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:42:58,139 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-09 00:42:58,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-09 00:42:58,573 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-09 00:42:59,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-09 00:42:59,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:00,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:43:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-09 00:43:00,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:00,935 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-09 00:43:01,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-09 00:43:01,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-09 00:43:02,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-09 00:43:02,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-09 00:43:03,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-09 00:43:03,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-09 00:43:03,731 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:03,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-09 00:43:03,731 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:03,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:03,737 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:03,742 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:03,742 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:03,747 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:03,752 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:03,753 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-09 00:43:04,062 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-09 00:43:04,062 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-09 00:43:04,066 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-09 00:43:04,385 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-09 00:43:04,385 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-09 00:43:04,390 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-09 00:43:04,706 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-09 00:43:04,706 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-09 00:43:04,711 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:04,711 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:04,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:04,716 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-09 00:43:04,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:04,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-09 00:43:04,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:04,739 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-09 00:43:04,739 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-09 00:43:04,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:04,945 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-09 00:43:04,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:04,958 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-09 00:43:04,970 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-09 00:43:04,971 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:04,974 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-09 00:43:04,974 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-09 00:43:05,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:05,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-09 00:43:05,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:05,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-09 00:43:05,364 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-09 00:43:05,364 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:05,368 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-09 00:43:05,368 [ scc.git] DEBUG package.json | 2 +- 2024-10-09 00:43:05,368 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-09 00:43:05,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:05,725 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:05,763 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:05,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:05,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:05,806 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:05,812 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea202bb400> has no local changes 2024-10-09 00:43:05,813 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:05,821 [ scc.git] DEBUG [detached HEAD ff292d7] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:05,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:05,822 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:06,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-09 00:43:06,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-09 00:43:07,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-09 00:43:07,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:08,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-09 00:43:08,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:08,620 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-09 00:43:08,620 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:08,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-09 00:43:08,620 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:08,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:08,626 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:08,632 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:08,633 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:08,638 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:08,645 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:08,645 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-09 00:43:08,957 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-09 00:43:08,957 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-09 00:43:08,962 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:08,962 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:08,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:08,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-09 00:43:08,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:08,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-09 00:43:08,991 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:09,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:09,126 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:09,165 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:09,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:09,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:09,208 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:09,214 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20283b20> has no local changes 2024-10-09 00:43:09,214 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:09,222 [ scc.git] DEBUG [detached HEAD 791c768] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:09,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:09,223 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:09,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-09 00:43:10,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-09 00:43:10,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-09 00:43:11,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-09 00:43:11,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-09 00:43:12,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:12,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-09 00:43:12,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:12,869 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-09 00:43:12,869 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:12,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-09 00:43:12,869 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:12,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:12,875 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:12,881 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:12,881 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:12,887 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:12,893 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:12,893 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-09 00:43:13,225 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-09 00:43:13,225 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-09 00:43:13,231 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:13,231 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:13,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:13,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-09 00:43:13,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:13,248 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-09 00:43:13,257 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-09 00:43:13,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:13,260 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-09 00:43:13,260 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-09 00:43:13,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:13,397 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:13,446 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:13,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:13,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:13,493 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:13,503 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20270ee0> has no local changes 2024-10-09 00:43:13,503 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:13,513 [ scc.git] DEBUG [detached HEAD cc250b9] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:13,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:13,514 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:13,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-09 00:43:14,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-09 00:43:14,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-09 00:43:15,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-09 00:43:15,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:16,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-09 00:43:16,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:16,744 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-09 00:43:16,744 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:16,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-09 00:43:16,744 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:16,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:16,751 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:16,764 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:16,764 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:16,771 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:16,778 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:16,779 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-09 00:43:17,087 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-09 00:43:17,088 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-09 00:43:17,092 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:17,092 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:17,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:17,100 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-09 00:43:17,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:17,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-09 00:43:17,124 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-09 00:43:17,124 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG Auto-merging setup.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-09 00:43:17,125 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:43:17,125 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:43:17,134 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-09 00:43:17,141 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-09 00:43:17,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:17,280 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-09 00:43:17,287 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-09 00:43:17,292 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py - omero_signup/views.py --conflicts 2024-10-09 00:43:17,298 [ scc.config] DEBUG Found github.token 2024-10-09 00:43:17,299 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-09 00:43:17,299 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:17,343 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:17,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:17,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:17,390 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:17,397 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20268be0> has no local changes 2024-10-09 00:43:17,397 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:17,406 [ scc.git] DEBUG [detached HEAD fff79c1] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:17,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:17,406 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:17,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-09 00:43:18,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-09 00:43:18,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-09 00:43:19,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-09 00:43:19,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:20,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-09 00:43:20,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:20,495 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-09 00:43:20,495 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:20,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-09 00:43:20,495 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:20,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:20,501 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:20,507 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:20,507 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:20,513 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:20,518 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:20,519 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-09 00:43:20,872 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-09 00:43:20,872 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-09 00:43:20,876 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:20,876 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:20,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:20,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-09 00:43:20,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:20,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-09 00:43:20,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-09 00:43:20,912 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-09 00:43:20,914 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-09 00:43:20,914 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-09 00:43:20,915 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-09 00:43:20,915 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-09 00:43:20,916 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-09 00:43:20,916 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-09 00:43:20,916 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-09 00:43:20,916 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-09 00:43:21,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:21,059 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:21,102 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,108 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:21,146 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:21,152 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea2023b640> has no local changes 2024-10-09 00:43:21,152 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:21,160 [ scc.git] DEBUG [detached HEAD a108706] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:21,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:21,161 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:21,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-09 00:43:21,506 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:21,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-09 00:43:21,506 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:21,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:21,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:21,524 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:21,531 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:21,531 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:21,531 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,536 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:21,574 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:21,619 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:21,626 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20244b50> has no local changes 2024-10-09 00:43:21,626 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:21,635 [ scc.git] DEBUG [detached HEAD e9ee6bf] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:21,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:21,636 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:21,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-09 00:43:21,901 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:21,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-09 00:43:21,901 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,907 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:21,912 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:21,912 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:21,918 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:21,924 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:21,924 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:21,924 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,930 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:21,967 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:21,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:21,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:22,012 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:22,018 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20283d60> has no local changes 2024-10-09 00:43:22,018 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:22,026 [ scc.git] DEBUG [detached HEAD b7843bd] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:22,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:22,027 [ scc.git] INFO Overriding base-branch from master to main 2024-10-09 00:43:22,027 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:22,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-09 00:43:22,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-09 00:43:23,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-09 00:43:23,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-09 00:43:24,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-09 00:43:24,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:25,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-09 00:43:25,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:25,543 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-09 00:43:25,544 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:25,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-09 00:43:25,544 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:25,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:25,549 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-09 00:43:25,555 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:25,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-09 00:43:25,560 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-09 00:43:25,566 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:25,566 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-09 00:43:25,943 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-09 00:43:25,943 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-09 00:43:25,947 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:25,947 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:25,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:25,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-09 00:43:25,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:25,964 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-09 00:43:25,974 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-09 00:43:25,975 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-09 00:43:25,975 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:43:25,975 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:43:25,981 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-09 00:43:25,987 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-09 00:43:26,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:26,126 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-09 00:43:26,132 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-09 00:43:26,138 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-09 00:43:26,144 [ scc.config] DEBUG Found github.token 2024-10-09 00:43:26,144 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-09 00:43:26,144 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:26,184 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:26,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:26,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:26,230 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:26,237 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea201e8910> has no local changes 2024-10-09 00:43:26,237 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:26,246 [ scc.git] DEBUG [detached HEAD 2747eab] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:26,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:26,246 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:26,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-09 00:43:26,541 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:26,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-09 00:43:26,541 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:26,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:26,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:26,552 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:26,552 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:26,558 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:26,564 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:26,564 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:26,564 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:26,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:26,569 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:26,609 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:26,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:26,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:26,653 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:26,660 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20240d60> has no local changes 2024-10-09 00:43:26,660 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:26,669 [ scc.git] DEBUG [detached HEAD ea13e1a] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:26,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:26,669 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:26,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-09 00:43:26,965 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:26,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-09 00:43:26,965 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:26,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:26,971 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:26,976 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:26,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:26,991 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:27,001 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:27,001 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:27,001 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:27,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:27,008 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:27,048 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:27,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:27,053 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:27,094 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:27,100 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea20204ee0> has no local changes 2024-10-09 00:43:27,100 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:27,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:27,110 [ scc.git] DEBUG [detached HEAD 0b75059] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:27,110 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:27,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-09 00:43:27,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-09 00:43:28,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-09 00:43:28,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-09 00:43:29,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:29,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-09 00:43:30,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:30,125 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-09 00:43:30,125 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:30,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-09 00:43:30,126 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:30,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:30,132 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-09 00:43:30,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:30,139 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-09 00:43:30,145 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-09 00:43:30,150 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:30,151 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-09 00:43:30,483 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-09 00:43:30,483 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-09 00:43:30,488 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:30,488 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:30,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:30,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-09 00:43:30,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:30,503 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-09 00:43:30,514 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-09 00:43:30,514 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-09 00:43:30,514 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:43:30,515 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:43:30,520 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-09 00:43:30,527 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-09 00:43:30,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:30,658 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-09 00:43:30,665 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-09 00:43:30,671 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-09 00:43:30,676 [ scc.config] DEBUG Found github.token 2024-10-09 00:43:30,676 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-09 00:43:30,676 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:30,717 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:30,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:30,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:30,764 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:30,771 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea201debe0> has no local changes 2024-10-09 00:43:30,771 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:30,781 [ scc.git] DEBUG [detached HEAD 25be096] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:30,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:30,781 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-09 00:43:30,781 [ scc.repo] DEBUG ## PRs found: 2024-10-09 00:43:31,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-09 00:43:31,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-09 00:43:32,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-09 00:43:32,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:33,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-09 00:43:33,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-09 00:43:33,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:33,869 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-09 00:43:34,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-09 00:43:34,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-09 00:43:35,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-09 00:43:35,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-09 00:43:36,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-09 00:43:36,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-09 00:43:37,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-09 00:43:37,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-09 00:43:38,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-09 00:43:38,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-09 00:43:38,498 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-09 00:43:38,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-09 00:43:39,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-09 00:43:39,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-09 00:43:40,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-09 00:43:40,362 [ scc.repo] DEBUG ## Branches found: 2024-10-09 00:43:40,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-09 00:43:40,362 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:40,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:40,369 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-09 00:43:40,373 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-09 00:43:40,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-09 00:43:40,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-09 00:43:40,383 [ scc.git] DEBUG Already up to date. 2024-10-09 00:43:40,384 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-09 00:43:40,683 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-09 00:43:40,683 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-09 00:43:40,687 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-09 00:43:41,010 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-09 00:43:41,011 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-09 00:43:41,015 [ scc.git] DEBUG ## Unique users: [] 2024-10-09 00:43:41,015 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:41,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:41,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-09 00:43:41,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:41,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-09 00:43:41,052 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-09 00:43:41,052 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-09 00:43:41,052 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-09 00:43:41,052 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-09 00:43:41,058 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-09 00:43:41,065 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-09 00:43:41,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:41,202 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-09 00:43:41,210 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-09 00:43:41,217 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#206](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-09 00:43:41,222 [ scc.config] DEBUG Found github.token 2024-10-09 00:43:41,223 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-09 00:43:41,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-09 00:43:41,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:41,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-09 00:43:41,244 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-09 00:43:41,246 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-09 00:43:41,247 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-09 00:43:41,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:41,579 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-09 00:43:41,619 [ scc.git] DEBUG Get sha1 of %s 2024-10-09 00:43:41,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-09 00:43:41,624 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:41,662 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:41,668 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea201c85b0> has no local changes 2024-10-09 00:43:41,668 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:41,677 [ scc.git] DEBUG [detached HEAD 33a904c] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:41,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:41,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-09 00:43:41,751 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-09 00:43:41,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:41,981 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-09 00:43:41,985 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-09 00:43:42,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:42,361 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-09 00:43:42,365 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-09 00:43:42,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:42,745 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-09 00:43:42,751 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-09 00:43:43,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:43,123 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-09 00:43:43,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:43,509 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-09 00:43:43,513 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-09 00:43:43,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:43,885 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-09 00:43:43,895 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-09 00:43:44,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:44,271 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-09 00:43:44,276 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-09 00:43:44,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:44,647 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-09 00:43:44,652 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-09 00:43:45,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:45,027 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-09 00:43:45,032 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-09 00:43:45,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:45,403 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-09 00:43:45,409 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-09 00:43:45,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:45,814 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-09 00:43:45,819 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-09 00:43:46,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:46,195 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-09 00:43:46,199 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-09 00:43:46,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:46,581 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-09 00:43:46,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:46,955 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-09 00:43:47,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:47,344 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-09 00:43:47,349 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-09 00:43:47,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:47,726 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-09 00:43:48,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:48,146 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-09 00:43:48,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:48,528 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-09 00:43:48,534 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-09 00:43:48,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:48,907 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-09 00:43:48,913 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-09 00:43:49,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:49,289 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-09 00:43:49,293 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-09 00:43:49,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:49,667 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-09 00:43:49,672 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-09 00:43:50,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-09 00:43:50,060 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-09 00:43:50,061 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-09 00:43:50,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fea230d1b80> has local changes 2024-10-09 00:43:50,145 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#206 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/206/)' 2024-10-09 00:43:50,161 [ scc.git] DEBUG [detached HEAD 20325b4] merge master -Dorg -Ssuccess-only 2024-10-09 00:43:50,161 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-09 00:43:50,161 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-09 00:43:50,161 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,161 [ scc.merge] INFO 2024-10-09 00:43:50,161 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,161 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-09 00:43:50,161 [ scc.merge] INFO 2024-10-09 00:43:50,161 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-09 00:43:50,161 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,161 [ scc.merge] INFO 2024-10-09 00:43:50,161 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,161 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-09 00:43:50,161 [ scc.merge] INFO 2024-10-09 00:43:50,161 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-09 00:43:50,162 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-09 00:43:50,162 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-09 00:43:50,162 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-09 00:43:50,162 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-09 00:43:50,162 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-09 00:43:50,162 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-09 00:43:50,162 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-10-09 00:43:50,162 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-09 00:43:50,162 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,162 [ scc.merge] INFO 2024-10-09 00:43:50,162 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-09 00:43:50,163 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-09 00:43:50,163 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-09 00:43:50,163 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-09 00:43:50,163 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-09 00:43:50,163 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-09 00:43:50,163 [ scc.merge] INFO 2024-10-09 00:43:50,163 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-09 00:43:50,163 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-09 00:43:50,164 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-09 00:43:50,164 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-09 00:43:50,164 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-09 00:43:50,164 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-09 00:43:50,164 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,164 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-09 00:43:50,164 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,164 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-09 00:43:50,164 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,164 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,165 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,165 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,165 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-09 00:43:50,165 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,165 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,165 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-09 00:43:50,165 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO 2024-10-09 00:43:50,165 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-09 00:43:50,166 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,166 [ scc.merge] INFO 2024-10-09 00:43:50,166 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-09 00:43:50,166 [ scc.merge] INFO 2024-10-09 00:43:50,166 [ scc.merge] INFO Repository: ome/scripts 2024-10-09 00:43:50,166 [ scc.merge] INFO Excluded PRs: 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-09 00:43:50,166 [ scc.merge] INFO Already up to date. 2024-10-09 00:43:50,166 [ scc.merge] INFO 2024-10-09 00:43:50,166 [ scc.merge] INFO Merged PRs: 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-09 00:43:50,166 [ scc.merge] INFO 2024-10-09 00:43:50,166 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-09 00:43:50,166 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-09 00:43:50,166 [ scc.merge] INFO 2024-10-09 00:43:50,166 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-09 00:43:50,166 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-09 00:43:50,172 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-09 00:43:50,178 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-09 00:43:50,183 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-09 00:43:50,187 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-09 00:43:50,192 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-09 00:43:50,198 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-09 00:43:50,203 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-09 00:43:50,209 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-09 00:43:50,215 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-09 00:43:50,219 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-09 00:43:50,224 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-09 00:43:50,229 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-09 00:43:50,234 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-09 00:43:50,239 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-09 00:43:50,244 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-09 00:43:50,249 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-09 00:43:50,254 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-09 00:43:50,259 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-09 00:43:50,265 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-09 00:43:50,270 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-09 00:43:50,276 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-09 00:43:50,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-09 00:43:50,280 [ scc.git] DEBUG Calling 'git remote' 2024-10-09 00:43:50,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 1fee4fb] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c0e5f95 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 59a65ca] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-09 00:44:34,229 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-09 00:44:42,983 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-09 00:44:45,265 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-09 00:44:49,646 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-09 00:45:29,038 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS