Started by upstream project "Trigger" build number 254 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 219 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-20 00:42:06,905 [ scc.config] DEBUG Found github.token 2024-10-20 00:42:06,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-20 00:42:07,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:42:07,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:42:07,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-20 00:42:07,854 [ scc.gh] DEBUG 4011 remaining from 5000 (Reset at 00:10 2024-10-20 00:42:07,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:07,859 [ scc.git] DEBUG Check current status 2024-10-20 00:42:07,859 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:07,863 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-20 00:42:07,863 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:07,912 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-20 00:42:07,915 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-20 00:42:07,917 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-20 00:42:07,921 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-20 00:42:07,925 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-20 00:42:07,928 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-20 00:42:07,930 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-20 00:42:07,935 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-20 00:42:07,939 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-20 00:42:07,942 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-20 00:42:07,944 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-20 00:42:07,947 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-20 00:42:07,950 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-20 00:42:07,952 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-20 00:42:07,979 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-20 00:42:07,982 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-20 00:42:07,985 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-20 00:42:07,987 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-20 00:42:07,990 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-20 00:42:07,993 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-20 00:42:07,995 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-20 00:42:07,999 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-20 00:42:08,005 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:08,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-20 00:42:08,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:09,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:09,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:09,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:09,974 [ scc.git] DEBUG Resetting... 2024-10-20 00:42:09,974 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-20 00:42:09,983 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-20 00:42:09,984 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-20 00:42:10,086 [ scc.git] DEBUG Check current status 2024-10-20 00:42:10,086 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:10,090 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-20 00:42:10,090 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:10,139 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-20 00:42:10,142 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-20 00:42:10,145 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-20 00:42:10,148 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-20 00:42:10,153 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-20 00:42:10,156 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-20 00:42:10,159 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-20 00:42:10,162 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-20 00:42:10,165 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-20 00:42:10,168 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-20 00:42:10,171 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-20 00:42:10,174 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-20 00:42:10,178 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-20 00:42:10,180 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-20 00:42:10,184 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-20 00:42:10,187 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-20 00:42:10,190 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-20 00:42:10,193 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-20 00:42:10,195 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-20 00:42:10,198 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-20 00:42:10,201 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-20 00:42:10,205 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-20 00:42:10,206 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-20 00:42:10,206 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-20 00:42:10,206 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-20 00:42:10,206 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-20 00:42:10,206 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-20 00:42:10,206 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:42:10,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-20 00:42:10,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-20 00:42:10,905 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:42:10,905 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-20 00:42:10,905 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:42:10,905 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:42:10,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:42:10,910 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:42:10,914 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:42:10,914 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:42:10,918 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:42:10,922 [ scc.git] DEBUG Already up to date. 2024-10-20 00:42:10,922 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-20 00:42:11,244 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-20 00:42:11,244 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-20 00:42:11,249 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:42:11,250 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:42:11,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:42:11,255 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-20 00:42:11,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:42:11,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-20 00:42:11,337 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:42:11,339 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-20 00:42:11,339 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-20 00:42:11,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:42:11,491 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:42:11,571 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-20 00:42:11,572 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:42:11,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:42:11,577 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:42:13,430 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f50c592f8b0> has no local changes 2024-10-20 00:42:13,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:42:13,517 [ scc.git] DEBUG [detached HEAD 8081c25] merge master -Dorg -Snone 2024-10-20 00:42:13,517 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-20 00:42:13,517 [ scc.merge] INFO Already up to date. 2024-10-20 00:42:13,517 [ scc.merge] INFO 2024-10-20 00:42:13,517 [ scc.merge] INFO Merged PRs: 2024-10-20 00:42:13,517 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-20 00:42:13,517 [ scc.merge] INFO 2024-10-20 00:42:13,517 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-20 00:42:13,517 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-20 00:42:21,777 [ scc.config] DEBUG Found github.token 2024-10-20 00:42:21,780 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-20 00:42:21,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:42:22,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:42:22,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-20 00:42:22,729 [ scc.gh] DEBUG 3999 remaining from 5000 (Reset at 00:10 2024-10-20 00:42:22,730 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:22,734 [ scc.git] DEBUG Check current status 2024-10-20 00:42:22,734 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:22,738 [ scc.git] DEBUG 8081c25 merge master -Dorg -Snone 2024-10-20 00:42:22,738 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:22,786 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-20 00:42:22,789 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-20 00:42:22,793 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-20 00:42:22,796 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-20 00:42:24,486 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-20 00:42:24,489 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-20 00:42:24,492 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-20 00:42:24,495 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-20 00:42:24,498 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-20 00:42:24,501 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-20 00:42:24,504 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-20 00:42:24,506 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-20 00:42:24,509 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-20 00:42:24,512 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-20 00:42:24,515 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-20 00:42:24,517 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-20 00:42:24,521 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-20 00:42:24,524 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-20 00:42:24,527 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-20 00:42:24,530 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-20 00:42:24,533 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-20 00:42:24,537 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-20 00:42:24,542 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:24,542 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-20 00:42:24,544 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-20 00:42:24,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-20 00:42:25,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:25,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:26,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:26,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:26,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:26,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-20 00:42:26,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:26,524 [ scc.git] DEBUG Check current status 2024-10-20 00:42:26,524 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:26,528 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-20 00:42:26,528 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:26,574 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:26,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-20 00:42:27,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:27,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:28,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:28,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:28,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:28,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:28,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-20 00:42:28,586 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:28,592 [ scc.git] DEBUG Check current status 2024-10-20 00:42:28,592 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:28,597 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-20 00:42:28,597 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:28,647 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:28,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-20 00:42:29,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:29,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:30,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:30,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:30,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:30,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:30,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-20 00:42:30,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:30,711 [ scc.git] DEBUG Check current status 2024-10-20 00:42:30,711 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:30,716 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-20 00:42:30,717 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:30,773 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:31,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-20 00:42:31,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:31,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:32,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:32,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:32,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:32,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:32,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-20 00:42:32,833 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:32,838 [ scc.git] DEBUG Check current status 2024-10-20 00:42:32,838 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:32,843 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-20 00:42:32,844 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:32,895 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:33,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-20 00:42:33,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:34,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:34,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:34,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:34,888 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:34,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:34,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-20 00:42:34,953 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:34,959 [ scc.git] DEBUG Check current status 2024-10-20 00:42:34,959 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:35,017 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-20 00:42:35,018 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:35,075 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:35,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-20 00:42:35,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:36,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:36,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:36,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:36,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:37,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:37,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-20 00:42:37,032 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:37,037 [ scc.git] DEBUG Check current status 2024-10-20 00:42:37,037 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:37,041 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-20 00:42:37,041 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:37,102 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:37,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-20 00:42:37,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:38,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:38,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:39,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:39,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:39,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:39,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-20 00:42:39,097 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:39,102 [ scc.git] DEBUG Check current status 2024-10-20 00:42:39,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:39,106 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-20 00:42:39,106 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:39,149 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:39,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-20 00:42:39,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:40,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:40,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:41,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:41,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:41,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:41,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-20 00:42:41,197 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:41,201 [ scc.git] DEBUG Check current status 2024-10-20 00:42:41,201 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:41,205 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-20 00:42:41,205 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:41,247 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:41,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-20 00:42:42,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:42,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:42,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:43,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:43,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:43,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:43,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-20 00:42:43,302 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:43,314 [ scc.git] DEBUG Check current status 2024-10-20 00:42:43,315 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:43,323 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-20 00:42:43,324 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:43,383 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:43,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-20 00:42:44,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:44,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:44,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:45,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:45,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:45,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:45,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-20 00:42:45,421 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:45,425 [ scc.git] DEBUG Check current status 2024-10-20 00:42:45,426 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:45,429 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-20 00:42:45,430 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:45,475 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:45,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-20 00:42:46,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:46,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:47,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:47,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:47,534 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:47,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:47,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-20 00:42:47,581 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:47,587 [ scc.git] DEBUG Check current status 2024-10-20 00:42:47,588 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:47,593 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-20 00:42:47,593 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:47,643 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:48,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-20 00:42:48,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:48,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:49,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:49,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:49,653 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:49,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:49,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-20 00:42:49,696 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:49,701 [ scc.git] DEBUG Check current status 2024-10-20 00:42:49,701 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:49,705 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-20 00:42:49,706 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:49,749 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:50,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-20 00:42:50,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:50,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:51,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:51,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:51,795 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:51,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:51,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-20 00:42:51,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:51,845 [ scc.git] DEBUG Check current status 2024-10-20 00:42:51,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:51,849 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-20 00:42:51,850 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:51,891 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:52,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-20 00:42:52,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:53,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:53,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:53,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:53,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:53,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:53,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-20 00:42:53,918 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:53,923 [ scc.git] DEBUG Check current status 2024-10-20 00:42:53,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:53,928 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-20 00:42:53,928 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:53,979 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:54,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-20 00:42:54,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:55,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:55,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:55,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:55,973 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:56,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:56,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-20 00:42:56,012 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:56,016 [ scc.git] DEBUG Check current status 2024-10-20 00:42:56,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:56,021 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-20 00:42:56,021 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:56,066 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:56,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-20 00:42:56,380 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-20 00:42:56,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-20 00:42:56,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:57,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:57,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:42:58,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:42:58,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:42:58,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:42:58,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-20 00:42:58,256 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:42:58,262 [ scc.git] DEBUG Check current status 2024-10-20 00:42:58,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:42:58,268 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-20 00:42:58,268 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:42:58,317 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:42:58,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-20 00:42:59,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:42:59,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:42:59,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:00,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:00,387 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:00,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:00,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-20 00:43:00,428 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:43:00,434 [ scc.git] DEBUG Check current status 2024-10-20 00:43:00,434 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:00,438 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-20 00:43:00,438 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:00,483 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:43:00,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-20 00:43:01,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:43:01,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:43:02,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:02,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:02,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:02,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:02,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-20 00:43:02,514 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:43:02,519 [ scc.git] DEBUG Check current status 2024-10-20 00:43:02,519 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:02,524 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-20 00:43:02,524 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:02,569 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:43:02,570 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-20 00:43:02,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-20 00:43:03,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:43:03,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:43:04,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:04,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:04,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:04,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:04,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-20 00:43:04,648 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:43:04,653 [ scc.git] DEBUG Check current status 2024-10-20 00:43:04,653 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:04,658 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-20 00:43:04,658 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:04,700 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:43:04,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-20 00:43:05,000 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-20 00:43:05,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-20 00:43:05,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:43:06,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:43:06,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:06,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:06,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:06,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:06,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-20 00:43:06,953 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:43:06,959 [ scc.git] DEBUG Check current status 2024-10-20 00:43:06,959 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:06,964 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-20 00:43:06,964 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:07,011 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:43:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-20 00:43:07,318 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-20 00:43:07,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-20 00:43:08,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:43:08,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:43:08,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:09,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:09,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:09,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:09,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-20 00:43:09,252 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:43:09,257 [ scc.git] DEBUG Check current status 2024-10-20 00:43:09,257 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:09,262 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-20 00:43:09,262 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:09,304 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:43:09,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-20 00:43:10,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:43:10,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:43:11,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:11,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:11,479 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:11,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:11,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-20 00:43:11,521 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-20 00:43:11,526 [ scc.git] DEBUG Check current status 2024-10-20 00:43:11,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:11,570 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-20 00:43:11,570 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:11,617 [ scc.config] DEBUG Found remote.origin.url 2024-10-20 00:43:11,618 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-20 00:43:11,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-20 00:43:11,878 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-20 00:43:12,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-20 00:43:12,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-20 00:43:13,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-20 00:43:13,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:13,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-20 00:43:13,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:13,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:13,909 [ scc.git] DEBUG Resetting... 2024-10-20 00:43:13,910 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-20 00:43:13,919 [ scc.git] DEBUG HEAD is now at 8081c25 merge master -Dorg -Snone 2024-10-20 00:43:13,919 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-20 00:43:14,017 [ scc.git] DEBUG Check current status 2024-10-20 00:43:14,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-20 00:43:14,022 [ scc.git] DEBUG 8081c25 merge master -Dorg -Snone 2024-10-20 00:43:14,023 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-20 00:43:14,067 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-20 00:43:14,070 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-20 00:43:14,072 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-20 00:43:14,075 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-20 00:43:14,085 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-20 00:43:14,087 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-20 00:43:14,090 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-20 00:43:14,093 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-20 00:43:14,096 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-20 00:43:14,098 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-20 00:43:14,101 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-20 00:43:14,104 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-20 00:43:14,107 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-20 00:43:14,109 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-20 00:43:14,112 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-20 00:43:14,115 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-20 00:43:14,117 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-20 00:43:14,120 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-20 00:43:14,122 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-20 00:43:14,126 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-20 00:43:14,129 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-20 00:43:14,133 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-20 00:43:14,134 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-20 00:43:14,134 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-20 00:43:14,135 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-20 00:43:14,135 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-20 00:43:14,135 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-20 00:43:14,135 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-20 00:43:14,135 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:43:14,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-20 00:43:14,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-20 00:43:14,821 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:43:15,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-20 00:43:15,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:16,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-20 00:43:16,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:16,587 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-20 00:43:16,587 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:43:16,587 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:16,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:16,592 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:43:16,597 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:43:16,597 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:43:16,603 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:43:16,609 [ scc.git] DEBUG Already up to date. 2024-10-20 00:43:16,609 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-20 00:43:16,929 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-20 00:43:16,929 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-20 00:43:16,935 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:43:16,935 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:16,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:16,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-20 00:43:16,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:16,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-20 00:43:16,956 [ scc.git] DEBUG Already up to date. 2024-10-20 00:43:17,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:17,087 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:43:17,143 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:17,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:17,150 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:43:17,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-20 00:43:18,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-20 00:43:18,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-20 00:43:19,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:19,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:43:19,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-20 00:43:20,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:20,318 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-20 00:43:20,318 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:43:20,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-20 00:43:20,318 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:20,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:20,323 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:43:20,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:43:20,328 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:43:20,333 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:43:20,338 [ scc.git] DEBUG Already up to date. 2024-10-20 00:43:20,338 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-20 00:43:20,946 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-20 00:43:20,946 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-20 00:43:20,951 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:43:20,951 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:20,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:20,957 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-20 00:43:20,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:20,970 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-20 00:43:21,072 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:43:21,075 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-20 00:43:21,075 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-20 00:43:21,075 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-20 00:43:21,075 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-20 00:43:21,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:21,206 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:43:21,247 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:21,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:21,253 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:21,294 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:43:21,300 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a1c89400> has no local changes 2024-10-20 00:43:21,301 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:43:21,309 [ scc.git] DEBUG [detached HEAD 4c173d2] merge master -Dorg -Ssuccess-only 2024-10-20 00:43:21,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:21,310 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:43:21,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-20 00:43:22,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-20 00:43:22,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-20 00:43:23,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-20 00:43:23,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:24,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:43:24,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-20 00:43:24,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:24,931 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-20 00:43:25,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-20 00:43:25,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-20 00:43:25,815 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:43:25,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-20 00:43:25,815 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:25,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:25,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:43:25,826 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:43:25,826 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:43:25,831 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:43:25,836 [ scc.git] DEBUG Already up to date. 2024-10-20 00:43:25,836 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-20 00:43:26,363 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-20 00:43:26,364 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-20 00:43:26,369 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:43:26,369 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:26,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:26,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-20 00:43:26,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:26,386 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-20 00:43:26,398 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:43:26,401 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-20 00:43:26,401 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-20 00:43:26,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:26,537 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:43:26,578 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:26,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:26,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:26,633 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:43:26,640 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a1c898e0> has no local changes 2024-10-20 00:43:26,640 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:43:26,650 [ scc.git] DEBUG [detached HEAD bad97a8] merge master -Dorg -Ssuccess-only 2024-10-20 00:43:26,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:26,650 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:43:27,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-20 00:43:27,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-20 00:43:27,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-20 00:43:28,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-20 00:43:28,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-20 00:43:29,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-20 00:43:29,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:30,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-20 00:43:30,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:30,587 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-20 00:43:31,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-20 00:43:31,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-20 00:43:31,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-20 00:43:32,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-20 00:43:32,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-20 00:43:32,856 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:43:32,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-20 00:43:32,856 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:32,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:32,862 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:43:32,868 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:43:32,868 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:43:32,873 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:43:32,879 [ scc.git] DEBUG Already up to date. 2024-10-20 00:43:32,879 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-20 00:43:33,515 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-20 00:43:33,515 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-20 00:43:33,522 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:43:33,522 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:33,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:33,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-20 00:43:33,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:33,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-20 00:43:33,659 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-20 00:43:33,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:43:33,663 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-20 00:43:33,663 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-20 00:43:33,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:33,791 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:43:33,831 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:33,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:33,837 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:33,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:43:33,882 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0c391c0> has no local changes 2024-10-20 00:43:33,882 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:43:33,890 [ scc.git] DEBUG [detached HEAD 2b5cee3] merge master -Dorg -Ssuccess-only 2024-10-20 00:43:33,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:33,891 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:43:34,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-20 00:43:34,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-20 00:43:35,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-20 00:43:35,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-20 00:43:36,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-20 00:43:36,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:37,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:43:37,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-20 00:43:37,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:38,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-20 00:43:38,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-20 00:43:38,772 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-20 00:43:39,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-20 00:43:39,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-20 00:43:40,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-20 00:43:40,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-20 00:43:41,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:41,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-20 00:43:41,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:41,949 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-20 00:43:42,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-20 00:43:42,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-20 00:43:43,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-20 00:43:43,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:44,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-20 00:43:44,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:44,769 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-20 00:43:44,769 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:43:44,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-20 00:43:44,770 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:44,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:44,775 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:43:44,780 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:43:44,780 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:43:44,785 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:43:44,791 [ scc.git] DEBUG Already up to date. 2024-10-20 00:43:44,791 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-20 00:43:45,259 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-20 00:43:45,260 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-20 00:43:45,265 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-20 00:43:45,590 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-20 00:43:45,590 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-20 00:43:45,596 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-20 00:43:45,958 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-20 00:43:45,959 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-20 00:43:45,963 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:43:45,963 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:45,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:45,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-20 00:43:45,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:45,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-20 00:43:46,110 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-20 00:43:46,110 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-20 00:43:46,110 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-20 00:43:46,110 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:43:46,111 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:43:46,118 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-20 00:43:46,126 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-20 00:43:46,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:46,270 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-20 00:43:46,278 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-20 00:43:46,284 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-20 00:43:46,289 [ scc.config] DEBUG Found github.token 2024-10-20 00:43:46,290 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-20 00:43:46,290 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-20 00:43:46,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:46,301 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-20 00:43:46,329 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-20 00:43:46,329 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-20 00:43:46,329 [ scc.git] DEBUG Auto-merging setup.py 2024-10-20 00:43:46,329 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-20 00:43:46,329 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-20 00:43:46,329 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-20 00:43:46,329 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-20 00:43:46,330 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:43:46,330 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:43:46,336 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-20 00:43:46,342 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-20 00:43:46,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:46,656 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-20 00:43:46,663 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-20 00:43:46,668 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-10-20 00:43:46,673 [ scc.config] DEBUG Found github.token 2024-10-20 00:43:46,674 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-20 00:43:46,674 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-20 00:43:46,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:46,685 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-20 00:43:46,700 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-20 00:43:46,701 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-20 00:43:46,701 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:43:46,704 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-20 00:43:46,704 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-20 00:43:46,704 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-20 00:43:46,704 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-20 00:43:46,705 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-20 00:43:46,705 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-20 00:43:47,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:43:47,035 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:43:47,076 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:43:47,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:43:47,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:43:47,123 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:43:47,130 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0c40df0> has no local changes 2024-10-20 00:43:47,130 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:43:47,139 [ scc.git] DEBUG [detached HEAD 4a6437c] merge master -Dorg -Ssuccess-only 2024-10-20 00:43:47,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:43:47,139 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:43:47,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-20 00:43:48,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599 HTTP/1.1" 200 None 2024-10-20 00:43:48,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599/comments HTTP/1.1" 200 None 2024-10-20 00:43:48,529 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:43:49,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d HTTP/1.1" 200 None 2024-10-20 00:43:49,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:49,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:43:50,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1ed40454af54ee6d3db9917aa88b5ccacd910f6d HTTP/1.1" 200 None 2024-10-20 00:43:50,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1ed40454af54ee6d3db9917aa88b5ccacd910f6d?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:50,767 [ scc.repo] DEBUG - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' 2024-10-20 00:43:51,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-20 00:43:51,275 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:43:51,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-20 00:43:52,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:52,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:43:53,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-20 00:43:53,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3c170054f782fb9ac230c740c32dceac9e50c618?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:53,556 [ scc.repo] DEBUG - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-20 00:43:53,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-20 00:43:54,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-20 00:43:54,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-20 00:43:55,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-20 00:43:55,331 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:43:55,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-20 00:43:56,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:43:56,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:43:57,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-20 00:43:57,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cb283024150d8f1fe9f02a312cfa2930001d7814?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:43:57,714 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-20 00:43:58,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-20 00:43:58,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-20 00:43:59,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-20 00:43:59,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:00,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:00,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-20 00:44:01,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:01,024 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-20 00:44:01,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-20 00:44:02,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-20 00:44:02,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-20 00:44:02,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-20 00:44:02,934 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:44:03,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-20 00:44:03,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:04,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:04,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-20 00:44:05,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bcdf94652b2841ead8d4d9386ea3aff751e64b4a?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:05,357 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-20 00:44:05,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-20 00:44:06,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-20 00:44:06,305 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:44:06,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-20 00:44:07,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:07,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:08,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-20 00:44:08,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3e0427ff792396a9b61921fac9f1c8ef656522cd?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:08,716 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-20 00:44:09,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-20 00:44:09,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-20 00:44:10,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-20 00:44:10,159 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:44:10,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-20 00:44:11,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:11,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:11,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-20 00:44:12,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4069931439f9e3daecd680e02fd1af13f7e2b755?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:12,379 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-20 00:44:12,380 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:44:12,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-20 00:44:12,380 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:12,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:12,387 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:44:12,393 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:44:12,393 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:44:12,401 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:44:12,410 [ scc.git] DEBUG Already up to date. 2024-10-20 00:44:12,410 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-20 00:44:13,314 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:13,314 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-20 00:44:13,320 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-20 00:44:13,606 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:13,606 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-20 00:44:13,614 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-20 00:44:13,987 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:13,988 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-20 00:44:13,996 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-20 00:44:14,358 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:14,359 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-20 00:44:14,365 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-20 00:44:14,653 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:14,654 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-20 00:44:14,661 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-10-20 00:44:15,037 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:15,037 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-10-20 00:44:15,043 [ scc.git] DEBUG Calling 'git fetch origin pull/599/head' 2024-10-20 00:44:15,402 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-20 00:44:15,403 [ scc.git] DEBUG * branch refs/pull/599/head -> FETCH_HEAD 2024-10-20 00:44:15,408 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:44:15,409 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:15,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:15,415 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-20 00:44:15,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:15,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-20 00:44:15,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:15,458 [ scc.git] DEBUG .gitignore | 2 + 2024-10-20 00:44:15,458 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-20 00:44:15,458 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-20 00:44:15,459 [ scc.git] DEBUG 11 files changed, 316 insertions(+), 17 deletions(-) 2024-10-20 00:44:15,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:15,591 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-20 00:44:15,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:15,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-20 00:44:15,999 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-20 00:44:15,999 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-20 00:44:15,999 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-20 00:44:16,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:16,007 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-20 00:44:16,007 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-20 00:44:16,007 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-20 00:44:16,007 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-20 00:44:16,007 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-20 00:44:16,007 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-20 00:44:16,007 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-20 00:44:16,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:16,176 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-20 00:44:16,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:16,193 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-20 00:44:16,366 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:16,373 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-20 00:44:16,374 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-20 00:44:16,374 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-20 00:44:16,374 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-20 00:44:16,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:16,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-20 00:44:16,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:16,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-20 00:44:16,785 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:16,789 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-20 00:44:16,789 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-20 00:44:16,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:16,946 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-20 00:44:16,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:16,964 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-20 00:44:17,302 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-20 00:44:17,303 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-20 00:44:17,303 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-20 00:44:17,303 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-20 00:44:17,303 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:17,309 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-20 00:44:17,310 [ scc.git] DEBUG package.json | 2 +- 2024-10-20 00:44:17,310 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-20 00:44:17,310 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-10-20 00:44:17,310 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-20 00:44:17,310 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-20 00:44:17,310 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-20 00:44:17,310 [ scc.git] DEBUG 7 files changed, 61 insertions(+), 33 deletions(-) 2024-10-20 00:44:17,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:17,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-20 00:44:17,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:17,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Query timestamps from all planes when C or Z dimensions are not filled) 3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-20 00:44:17,492 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:17,496 [ scc.git] DEBUG omero_figure/omeroutils.py | 25 +++++++++++++++++++++++++ 2024-10-20 00:44:17,496 [ scc.git] DEBUG 1 file changed, 25 insertions(+) 2024-10-20 00:44:17,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:17,833 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ed40454af54ee6d3db9917aa88b5ccacd910f6d' 2024-10-20 00:44:17,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:17,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 599 (Patch label text selection issue from drag and drop) 1ed40454af54ee6d3db9917aa88b5ccacd910f6d' 2024-10-20 00:44:17,935 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-20 00:44:17,936 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:17,941 [ scc.git] DEBUG src/js/views/right_panel_view.js | 4 +++- 2024-10-20 00:44:17,941 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2024-10-20 00:44:18,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:18,215 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:44:18,261 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:18,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:18,267 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:44:18,312 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:44:18,323 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0c32820> has no local changes 2024-10-20 00:44:18,323 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:44:18,338 [ scc.git] DEBUG [detached HEAD 717281ba] merge master -Dorg -Ssuccess-only 2024-10-20 00:44:18,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:44:18,339 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:44:18,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-20 00:44:19,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-20 00:44:19,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-20 00:44:20,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-20 00:44:20,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:20,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-20 00:44:21,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:21,378 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-20 00:44:21,378 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:44:21,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-20 00:44:21,378 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:21,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:21,385 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:44:21,390 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:44:21,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:44:21,396 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:44:21,403 [ scc.git] DEBUG Already up to date. 2024-10-20 00:44:21,403 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-20 00:44:21,820 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-20 00:44:21,821 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-20 00:44:21,825 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:44:21,826 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:21,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:21,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-20 00:44:21,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:21,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-20 00:44:21,858 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-20 00:44:21,858 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:21,861 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-20 00:44:21,861 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-20 00:44:22,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:22,012 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:44:22,057 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:22,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:22,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:44:22,106 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:44:22,113 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0c059d0> has no local changes 2024-10-20 00:44:22,114 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:44:22,123 [ scc.git] DEBUG [detached HEAD 45ad5d2] merge master -Dorg -Ssuccess-only 2024-10-20 00:44:22,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:44:22,123 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:44:22,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-20 00:44:22,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-20 00:44:22,897 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:44:23,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-20 00:44:23,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:24,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:24,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-20 00:44:25,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:25,351 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-20 00:44:25,351 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:44:25,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-20 00:44:25,351 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:25,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:25,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:44:25,370 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:44:25,370 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:44:25,385 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:44:25,396 [ scc.git] DEBUG Already up to date. 2024-10-20 00:44:25,396 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-20 00:44:25,706 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-20 00:44:25,707 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-20 00:44:25,713 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:44:25,714 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:25,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:25,721 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-20 00:44:25,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:25,734 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-20 00:44:25,755 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:25,762 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-20 00:44:25,762 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-20 00:44:25,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:25,890 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:44:25,932 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:25,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:25,938 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:44:25,977 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:44:25,986 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0bd8be0> has no local changes 2024-10-20 00:44:25,986 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:44:25,995 [ scc.git] DEBUG [detached HEAD c142ea2] merge master -Dorg -Ssuccess-only 2024-10-20 00:44:25,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:44:25,996 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:44:26,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-20 00:44:26,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-20 00:44:27,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-20 00:44:27,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-20 00:44:28,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-20 00:44:28,354 [ scc.repo] DEBUG # ... Include label: include 2024-10-20 00:44:28,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-20 00:44:29,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:29,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:30,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-20 00:44:30,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:30,620 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-20 00:44:31,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-20 00:44:31,067 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:44:31,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-20 00:44:32,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:32,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:33,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-20 00:44:33,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:33,500 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-20 00:44:33,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-20 00:44:34,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-20 00:44:34,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-20 00:44:35,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:35,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:36,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-20 00:44:36,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:36,800 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-20 00:44:37,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-20 00:44:37,273 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:44:37,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-20 00:44:38,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:38,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:39,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-20 00:44:39,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:39,586 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-20 00:44:40,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-20 00:44:40,088 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:44:40,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-20 00:44:41,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:41,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:42,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-20 00:44:42,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:42,573 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-20 00:44:43,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-20 00:44:43,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-20 00:44:44,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-20 00:44:44,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:45,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:45,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-20 00:44:45,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:45,895 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-20 00:44:46,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-20 00:44:46,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-20 00:44:47,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-20 00:44:47,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:48,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:44:48,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-20 00:44:49,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:49,170 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-20 00:44:49,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-20 00:44:50,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-20 00:44:50,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-20 00:44:50,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:44:51,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-20 00:44:51,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:44:51,826 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-20 00:44:51,826 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:44:51,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-20 00:44:51,826 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:51,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:51,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:44:51,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:44:51,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:44:52,009 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:44:52,016 [ scc.git] DEBUG Already up to date. 2024-10-20 00:44:52,016 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-20 00:44:52,691 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:52,691 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-20 00:44:52,697 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-20 00:44:54,113 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:54,113 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-20 00:44:54,118 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-20 00:44:55,265 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:55,266 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-20 00:44:55,272 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-20 00:44:55,555 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:55,555 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-20 00:44:55,560 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-20 00:44:55,845 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:55,846 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-20 00:44:55,851 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-20 00:44:56,376 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:56,376 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-20 00:44:56,381 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-20 00:44:56,662 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:56,663 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-20 00:44:56,667 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-20 00:44:57,779 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-20 00:44:57,780 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-20 00:44:57,784 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:44:57,785 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:44:57,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:57,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-20 00:44:57,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:57,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-20 00:44:57,945 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-20 00:44:57,946 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:57,950 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-20 00:44:57,950 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-20 00:44:57,950 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-20 00:44:58,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:58,081 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-20 00:44:58,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:58,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-20 00:44:58,362 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-20 00:44:58,362 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-20 00:44:58,362 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-20 00:44:58,362 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-20 00:44:58,363 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:58,367 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-20 00:44:58,367 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-20 00:44:58,367 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-20 00:44:58,367 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-20 00:44:58,367 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-20 00:44:58,367 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-20 00:44:58,367 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-20 00:44:58,367 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-20 00:44:58,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:58,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-20 00:44:58,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:58,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-20 00:44:58,711 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-20 00:44:58,711 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:58,714 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-20 00:44:58,714 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-20 00:44:58,715 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-20 00:44:58,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:58,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-20 00:44:58,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:58,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-20 00:44:58,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:58,953 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-20 00:44:58,953 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-20 00:44:59,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:59,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-20 00:44:59,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:59,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-20 00:44:59,466 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-20 00:44:59,467 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:44:59,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:44:59,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-20 00:44:59,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:44:59,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-20 00:45:00,126 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-20 00:45:00,126 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-20 00:45:00,126 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-20 00:45:00,127 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:00,132 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-20 00:45:00,132 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-20 00:45:00,132 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-20 00:45:00,132 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-20 00:45:00,132 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-20 00:45:00,132 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-20 00:45:00,132 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-20 00:45:00,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:00,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-20 00:45:00,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:00,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-20 00:45:00,608 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-20 00:45:00,609 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:00,626 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-20 00:45:00,626 [ scc.git] DEBUG package.json | 2 +- 2024-10-20 00:45:00,626 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-20 00:45:00,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:00,807 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-20 00:45:00,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:00,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-20 00:45:00,900 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:00,903 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-20 00:45:00,903 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-20 00:45:01,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:01,202 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:01,241 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:01,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:01,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:01,287 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:01,297 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0bd6e50> has no local changes 2024-10-20 00:45:01,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:01,307 [ scc.git] DEBUG [detached HEAD aefb726] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:01,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:01,307 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:01,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-20 00:45:02,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-20 00:45:02,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-20 00:45:03,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-20 00:45:03,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:04,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:45:04,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-20 00:45:05,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-20 00:45:05,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-20 00:45:05,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:06,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-20 00:45:06,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:06,891 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-20 00:45:06,891 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:06,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-20 00:45:06,891 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:06,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:06,897 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:06,902 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:06,902 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:06,907 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:06,913 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:06,913 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-20 00:45:07,203 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-20 00:45:07,203 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-20 00:45:07,207 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:07,207 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:07,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:07,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-20 00:45:07,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:07,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-20 00:45:07,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:07,240 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-20 00:45:07,240 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-20 00:45:07,240 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-20 00:45:07,240 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-20 00:45:07,240 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-20 00:45:07,240 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-20 00:45:07,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:07,458 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:07,500 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:07,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:07,506 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:07,547 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:07,554 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a03b2370> has no local changes 2024-10-20 00:45:07,554 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:07,563 [ scc.git] DEBUG [detached HEAD 917d2a0] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:07,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:07,563 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:07,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-20 00:45:08,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-20 00:45:08,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-20 00:45:09,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-20 00:45:09,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:10,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-20 00:45:10,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:10,725 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-20 00:45:11,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-20 00:45:11,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-20 00:45:12,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-20 00:45:12,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:13,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-20 00:45:13,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:13,438 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-20 00:45:13,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-20 00:45:14,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-20 00:45:14,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-20 00:45:15,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:15,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-20 00:45:16,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:16,198 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-20 00:45:16,198 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:16,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-20 00:45:16,198 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:16,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:16,204 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:16,210 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:16,210 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:16,216 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:16,223 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:16,223 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-20 00:45:16,917 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-20 00:45:16,917 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-20 00:45:16,924 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-20 00:45:17,599 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-20 00:45:17,600 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-20 00:45:17,605 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-20 00:45:17,907 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-20 00:45:17,908 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-20 00:45:17,912 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:17,912 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:17,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:17,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-20 00:45:17,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:17,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-20 00:45:17,960 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-20 00:45:17,960 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-20 00:45:17,960 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-20 00:45:17,960 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-20 00:45:17,961 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:45:17,962 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:45:17,968 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-20 00:45:17,976 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-20 00:45:18,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:18,111 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-20 00:45:18,119 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-20 00:45:18,126 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-20 00:45:18,132 [ scc.config] DEBUG Found github.token 2024-10-20 00:45:18,132 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-20 00:45:18,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-20 00:45:18,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:18,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-20 00:45:18,179 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-20 00:45:18,179 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-20 00:45:18,179 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-20 00:45:18,179 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:45:18,180 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:45:18,186 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-20 00:45:18,194 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-20 00:45:18,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:18,495 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-20 00:45:18,503 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-20 00:45:18,510 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-20 00:45:18,515 [ scc.config] DEBUG Found github.token 2024-10-20 00:45:18,516 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-20 00:45:18,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-20 00:45:18,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:18,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-20 00:45:18,583 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:18,586 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-20 00:45:18,586 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-20 00:45:18,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:18,883 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:18,924 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:18,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:18,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:18,975 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:18,983 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a03b4ee0> has no local changes 2024-10-20 00:45:18,984 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:18,995 [ scc.git] DEBUG [detached HEAD b3d5f9f] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:18,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:18,995 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:19,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-20 00:45:19,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-20 00:45:19,894 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:45:20,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-20 00:45:20,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:21,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:45:21,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-20 00:45:22,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:22,366 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-20 00:45:22,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-20 00:45:22,813 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:45:23,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-20 00:45:23,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:24,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:45:24,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-20 00:45:25,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:25,215 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-20 00:45:25,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-20 00:45:25,658 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-20 00:45:26,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-20 00:45:26,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:27,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:45:27,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-20 00:45:27,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:27,987 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-20 00:45:28,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-20 00:45:28,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-20 00:45:29,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-20 00:45:29,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-20 00:45:30,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-20 00:45:30,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-20 00:45:30,652 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:30,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-20 00:45:30,652 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:30,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:30,659 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:30,664 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:30,665 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:30,671 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:30,677 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:30,677 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-20 00:45:30,987 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-20 00:45:30,987 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-20 00:45:30,993 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-20 00:45:31,282 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-20 00:45:31,283 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-20 00:45:31,289 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-20 00:45:31,581 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-20 00:45:31,581 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-20 00:45:31,586 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:31,586 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:31,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:31,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-20 00:45:31,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:31,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-20 00:45:31,616 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:31,619 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-20 00:45:31,619 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-20 00:45:31,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:31,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-20 00:45:31,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:31,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-20 00:45:31,856 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-20 00:45:31,857 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:31,860 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-20 00:45:31,860 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-20 00:45:32,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:32,142 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-20 00:45:32,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:32,156 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-20 00:45:32,171 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-20 00:45:32,171 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:32,174 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-20 00:45:32,175 [ scc.git] DEBUG package.json | 2 +- 2024-10-20 00:45:32,175 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-20 00:45:32,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:32,532 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:32,577 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:32,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:32,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:32,627 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:32,635 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a03babe0> has no local changes 2024-10-20 00:45:32,635 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:32,645 [ scc.git] DEBUG [detached HEAD 72f765b] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:32,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:32,646 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:32,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-20 00:45:33,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-20 00:45:33,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-20 00:45:34,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:34,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-20 00:45:35,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:35,258 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-20 00:45:35,259 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:35,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-20 00:45:35,259 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:35,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:35,265 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:35,271 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:35,271 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:35,277 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:35,283 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:35,283 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-20 00:45:35,598 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-20 00:45:35,598 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-20 00:45:35,603 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:35,603 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:35,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:35,609 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-20 00:45:35,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:35,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-20 00:45:35,629 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:35,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:35,767 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:35,806 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:35,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:35,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:35,851 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:35,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0382fa0> has no local changes 2024-10-20 00:45:35,858 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:35,865 [ scc.git] DEBUG [detached HEAD babdd8d] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:35,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:35,866 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:36,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-20 00:45:36,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-20 00:45:37,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-20 00:45:37,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-20 00:45:38,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-20 00:45:38,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:39,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-20 00:45:39,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:39,416 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-20 00:45:39,416 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:39,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-20 00:45:39,417 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:39,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:39,423 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:39,427 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:39,427 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:39,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:39,438 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:39,438 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-20 00:45:39,848 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-20 00:45:39,848 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-20 00:45:39,853 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:39,853 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:39,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:39,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-20 00:45:39,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:39,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-20 00:45:39,878 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-20 00:45:39,878 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:39,881 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-20 00:45:39,881 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-20 00:45:40,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:40,017 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:40,055 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:40,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:40,061 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:40,097 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:40,103 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0376e80> has no local changes 2024-10-20 00:45:40,104 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:40,111 [ scc.git] DEBUG [detached HEAD b029440] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:40,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:40,112 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:40,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-20 00:45:40,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-20 00:45:41,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-20 00:45:41,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-20 00:45:42,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:42,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-20 00:45:43,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:43,279 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-20 00:45:43,279 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:43,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-20 00:45:43,280 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:43,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:43,285 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:43,291 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:43,291 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:43,302 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:43,312 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:43,312 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-20 00:45:43,737 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-20 00:45:43,737 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-20 00:45:43,742 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:43,742 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:43,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:43,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-20 00:45:43,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:43,762 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-20 00:45:43,938 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG Auto-merging setup.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-20 00:45:43,938 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:45:43,939 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:45:43,945 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-20 00:45:43,953 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-20 00:45:44,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:44,126 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-20 00:45:44,134 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-20 00:45:44,141 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2024-10-20 00:45:44,149 [ scc.config] DEBUG Found github.token 2024-10-20 00:45:44,149 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-20 00:45:44,149 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:44,192 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:44,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:44,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:44,246 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:44,254 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0362700> has no local changes 2024-10-20 00:45:44,255 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:44,269 [ scc.git] DEBUG [detached HEAD 7f97ef4] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:44,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:44,270 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:44,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-20 00:45:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-20 00:45:45,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-20 00:45:45,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-20 00:45:46,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:46,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-20 00:45:47,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:47,219 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-20 00:45:47,219 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:47,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-20 00:45:47,219 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:47,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:47,225 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:47,230 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:47,231 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:47,236 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:47,243 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:47,243 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-20 00:45:47,678 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-20 00:45:47,678 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-20 00:45:47,683 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:47,683 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:47,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:47,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-20 00:45:47,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:47,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-20 00:45:47,717 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-20 00:45:47,720 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-20 00:45:47,723 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-20 00:45:47,723 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-20 00:45:47,724 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-20 00:45:47,724 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-20 00:45:47,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:47,854 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:47,897 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:47,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:47,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:47,944 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:47,951 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a03825b0> has no local changes 2024-10-20 00:45:47,952 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:47,962 [ scc.git] DEBUG [detached HEAD aa1fe1c] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:47,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:47,963 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:48,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-20 00:45:48,253 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:48,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-20 00:45:48,253 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:48,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:48,259 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:48,265 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:48,265 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:48,271 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:48,278 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:48,278 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:48,278 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:48,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:48,284 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:48,326 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:48,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:48,332 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:48,378 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:48,385 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a033a2e0> has no local changes 2024-10-20 00:45:48,385 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:48,395 [ scc.git] DEBUG [detached HEAD 59f20f5] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:48,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:48,396 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:48,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-20 00:45:48,687 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:48,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-20 00:45:48,687 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:48,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:48,693 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:48,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:48,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:48,704 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:48,710 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:48,710 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:48,710 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:48,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:48,715 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:48,757 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:48,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:48,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:48,805 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:48,813 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a02eda00> has no local changes 2024-10-20 00:45:48,813 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:48,823 [ scc.git] DEBUG [detached HEAD e180f0a] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:48,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:48,823 [ scc.git] INFO Overriding base-branch from master to main 2024-10-20 00:45:48,823 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:49,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-20 00:45:49,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-20 00:45:50,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-20 00:45:50,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-20 00:45:51,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-20 00:45:51,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:51,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-20 00:45:52,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:52,355 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-20 00:45:52,355 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:52,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-20 00:45:52,356 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:52,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:52,364 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-20 00:45:52,373 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:52,373 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-20 00:45:52,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-20 00:45:52,387 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:52,387 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-20 00:45:52,724 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-20 00:45:52,724 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-20 00:45:52,729 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:52,729 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:52,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:52,735 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-20 00:45:52,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:52,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-20 00:45:52,848 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-20 00:45:52,849 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-20 00:45:52,849 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:45:52,849 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:45:52,855 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-20 00:45:52,861 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-20 00:45:52,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:52,995 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-20 00:45:53,002 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-20 00:45:53,008 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-20 00:45:53,013 [ scc.config] DEBUG Found github.token 2024-10-20 00:45:53,014 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-20 00:45:53,014 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:53,056 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,062 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:53,103 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:53,110 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a030aeb0> has no local changes 2024-10-20 00:45:53,111 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:53,120 [ scc.git] DEBUG [detached HEAD 8511409] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:53,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:53,120 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:53,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-20 00:45:53,408 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:53,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-20 00:45:53,408 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:53,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:53,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:53,427 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:53,434 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:53,435 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:53,435 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,440 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:53,480 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:53,524 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:53,532 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a02ed7c0> has no local changes 2024-10-20 00:45:53,533 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:53,542 [ scc.git] DEBUG [detached HEAD 80727fa] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:53,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:53,542 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:53,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-20 00:45:53,810 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:53,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-20 00:45:53,810 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,816 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:53,821 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:53,821 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:53,826 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:53,831 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:53,832 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:53,832 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,836 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:53,875 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:53,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:53,882 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:53,922 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:53,929 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a02dfe80> has no local changes 2024-10-20 00:45:53,929 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:53,939 [ scc.git] DEBUG [detached HEAD 6982139] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:53,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:53,940 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:54,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-20 00:45:54,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-20 00:45:55,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-20 00:45:55,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-20 00:45:56,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:45:56,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-20 00:45:56,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:45:56,990 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-20 00:45:56,990 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:45:56,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-20 00:45:56,990 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:56,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:56,997 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-20 00:45:57,002 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:45:57,003 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-20 00:45:57,009 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-20 00:45:57,016 [ scc.git] DEBUG Already up to date. 2024-10-20 00:45:57,016 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-20 00:45:57,434 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-20 00:45:57,434 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-20 00:45:57,439 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:45:57,439 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:57,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:57,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-20 00:45:57,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:57,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-20 00:45:57,571 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-20 00:45:57,572 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-20 00:45:57,572 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:45:57,572 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:45:57,579 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-20 00:45:57,587 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-20 00:45:57,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:45:57,725 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-20 00:45:57,732 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-20 00:45:57,738 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-20 00:45:57,743 [ scc.config] DEBUG Found github.token 2024-10-20 00:45:57,743 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-20 00:45:57,743 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:45:57,786 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:45:57,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:45:57,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:45:57,837 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:45:57,845 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a02d5fd0> has no local changes 2024-10-20 00:45:57,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:45:57,855 [ scc.git] DEBUG [detached HEAD 9c523a0] merge master -Dorg -Ssuccess-only 2024-10-20 00:45:57,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:45:57,855 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-20 00:45:57,855 [ scc.repo] DEBUG ## PRs found: 2024-10-20 00:45:58,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-20 00:45:58,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-20 00:45:59,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-20 00:45:59,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-20 00:46:00,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:46:00,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-20 00:46:00,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-20 00:46:01,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:46:01,400 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-20 00:46:01,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-20 00:46:02,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-20 00:46:02,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-20 00:46:03,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-20 00:46:03,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-20 00:46:04,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-20 00:46:04,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-20 00:46:05,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-20 00:46:05,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-20 00:46:05,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-20 00:46:05,960 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-20 00:46:06,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-20 00:46:06,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-20 00:46:07,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-20 00:46:07,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-20 00:46:07,825 [ scc.repo] DEBUG ## Branches found: 2024-10-20 00:46:07,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-20 00:46:07,825 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:46:07,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:46:07,831 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-20 00:46:07,836 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-20 00:46:07,836 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-20 00:46:07,841 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-20 00:46:07,847 [ scc.git] DEBUG Already up to date. 2024-10-20 00:46:07,847 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-20 00:46:08,356 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-20 00:46:08,356 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-20 00:46:08,361 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-20 00:46:08,833 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-20 00:46:08,833 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-20 00:46:08,838 [ scc.git] DEBUG ## Unique users: [] 2024-10-20 00:46:08,839 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:46:08,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:46:08,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-20 00:46:08,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:46:08,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-20 00:46:08,976 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-20 00:46:08,976 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-20 00:46:08,976 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-20 00:46:08,977 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-20 00:46:08,985 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-20 00:46:08,992 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-20 00:46:09,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:09,129 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-20 00:46:09,137 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-20 00:46:09,144 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#217](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-20 00:46:09,150 [ scc.config] DEBUG Found github.token 2024-10-20 00:46:09,150 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-20 00:46:09,150 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-20 00:46:09,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:46:09,163 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-20 00:46:09,186 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-20 00:46:09,189 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-20 00:46:09,189 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-20 00:46:09,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:09,511 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-20 00:46:09,558 [ scc.git] DEBUG Get sha1 of %s 2024-10-20 00:46:09,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-20 00:46:09,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:46:09,602 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:46:09,609 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a0246520> has no local changes 2024-10-20 00:46:09,609 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:46:09,618 [ scc.git] DEBUG [detached HEAD 369b756] merge master -Dorg -Ssuccess-only 2024-10-20 00:46:09,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:09,619 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-20 00:46:09,699 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-20 00:46:09,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:09,904 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-20 00:46:09,909 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-20 00:46:10,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:10,284 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-20 00:46:10,293 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-20 00:46:10,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:10,662 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-20 00:46:10,667 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-20 00:46:11,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:11,042 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-20 00:46:11,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:11,430 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-20 00:46:11,435 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-20 00:46:11,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:11,801 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-20 00:46:11,806 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-20 00:46:12,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:12,188 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-20 00:46:12,193 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-20 00:46:12,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:12,569 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-20 00:46:12,574 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-20 00:46:12,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:12,960 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-20 00:46:12,964 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-20 00:46:13,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:13,351 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-20 00:46:13,356 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-20 00:46:13,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:13,732 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-20 00:46:13,738 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-20 00:46:14,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:14,203 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-20 00:46:14,209 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-20 00:46:14,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:14,593 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-20 00:46:14,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:14,991 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-20 00:46:15,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:15,366 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-20 00:46:15,372 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-20 00:46:15,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:15,782 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-20 00:46:16,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:16,170 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-20 00:46:16,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:16,540 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-20 00:46:16,546 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-20 00:46:16,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:16,918 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-20 00:46:16,923 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-20 00:46:17,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:17,299 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-20 00:46:17,305 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-20 00:46:17,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:17,699 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-20 00:46:17,703 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-20 00:46:18,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-20 00:46:18,086 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-20 00:46:18,086 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-20 00:46:18,167 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f72a1f278b0> has local changes 2024-10-20 00:46:18,167 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#217 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/217/)' 2024-10-20 00:46:18,182 [ scc.git] DEBUG [detached HEAD 5e64c9b] merge master -Dorg -Ssuccess-only 2024-10-20 00:46:18,182 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-20 00:46:18,182 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-20 00:46:18,182 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,182 [ scc.merge] INFO 2024-10-20 00:46:18,182 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-20 00:46:18,183 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-20 00:46:18,183 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-20 00:46:18,183 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-20 00:46:18,183 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-20 00:46:18,183 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-20 00:46:18,183 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-20 00:46:18,183 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,183 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-20 00:46:18,183 [ scc.merge] INFO 2024-10-20 00:46:18,183 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-20 00:46:18,184 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-20 00:46:18,184 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection issue from drag and drop' 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-20 00:46:18,184 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-20 00:46:18,184 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-20 00:46:18,184 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-20 00:46:18,184 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-20 00:46:18,184 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,184 [ scc.merge] INFO 2024-10-20 00:46:18,184 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-20 00:46:18,185 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-20 00:46:18,185 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-20 00:46:18,185 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-20 00:46:18,185 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-20 00:46:18,185 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,185 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-20 00:46:18,185 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-20 00:46:18,185 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-20 00:46:18,186 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-20 00:46:18,186 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-20 00:46:18,186 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,186 [ scc.merge] INFO 2024-10-20 00:46:18,186 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-20 00:46:18,186 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-20 00:46:18,187 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-20 00:46:18,187 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-20 00:46:18,187 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Repository: ome/scripts 2024-10-20 00:46:18,187 [ scc.merge] INFO Excluded PRs: 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-20 00:46:18,187 [ scc.merge] INFO Already up to date. 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Merged PRs: 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-20 00:46:18,187 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-20 00:46:18,187 [ scc.merge] INFO 2024-10-20 00:46:18,187 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-20 00:46:18,187 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-20 00:46:18,193 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-20 00:46:18,199 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-20 00:46:18,205 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-20 00:46:18,210 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-20 00:46:18,215 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-20 00:46:18,221 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-20 00:46:18,227 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-20 00:46:18,232 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-20 00:46:18,238 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-20 00:46:18,244 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-20 00:46:18,249 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-20 00:46:18,254 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-20 00:46:18,258 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-20 00:46:18,263 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-20 00:46:18,268 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-20 00:46:18,274 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-20 00:46:18,280 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-20 00:46:18,285 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-20 00:46:18,290 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-20 00:46:18,296 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-20 00:46:18,302 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-20 00:46:18,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-20 00:46:18,306 [ scc.git] DEBUG Calling 'git remote' 2024-10-20 00:46:18,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 727d678] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c0e5f95 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 533cc97] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-20 00:47:04,233 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-20 00:47:12,958 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-20 00:47:15,245 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-20 00:47:19,636 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-20 00:47:59,673 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS