Started by upstream project "Trigger" build number 93 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 05f561e50be2431cd9410d50001265d0083e357b (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 05f561e50be2431cd9410d50001265d0083e357b # timeout=10 Commit message: "Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542" > git rev-list --no-walk 05f561e50be2431cd9410d50001265d0083e357b # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 83 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.1-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.1-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.1 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-05 00:33:51,860 [ scc.config] DEBUG Found github.token 2024-06-05 00:33:51,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-05 00:33:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:33:52,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:33:52,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-05 00:33:52,957 [ scc.gh] DEBUG 4322 remaining from 5000 (Reset at 00:06 2024-06-05 00:33:52,958 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:33:52,961 [ scc.git] DEBUG Check current status 2024-06-05 00:33:52,962 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:33:52,965 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542 2024-06-05 00:33:52,965 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:33:53,002 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-05 00:33:53,005 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-05 00:33:53,126 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-05 00:33:53,130 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-05 00:33:53,133 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-05 00:33:53,138 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:33:53,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-06-05 00:33:53,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:33:54,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:33:54,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:33:55,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:33:55,178 [ scc.git] DEBUG Resetting... 2024-06-05 00:33:55,179 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-05 00:33:55,189 [ scc.git] DEBUG HEAD is now at 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542 2024-06-05 00:33:55,190 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-05 00:33:55,272 [ scc.git] DEBUG Check current status 2024-06-05 00:33:55,272 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:33:55,278 [ scc.git] DEBUG 05f561e Merge pull request #282 from ome/dependabot/submodules/omero-py-d3a6542 2024-06-05 00:33:55,279 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:33:55,329 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-05 00:33:55,332 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-05 00:33:55,336 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-05 00:33:55,341 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-05 00:33:55,347 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-05 00:33:55,348 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-05 00:33:55,349 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-05 00:33:55,349 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-05 00:33:55,349 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-05 00:33:55,349 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-05 00:33:55,349 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:33:55,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-06-05 00:33:55,617 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:33:55,617 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:33:55,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:33:55,622 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-05 00:33:55,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:33:55,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-05 00:33:55,632 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-05 00:33:55,637 [ scc.git] DEBUG Already up to date. 2024-06-05 00:33:55,637 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:33:55,637 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:33:55,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:33:55,641 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:33:55,688 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:33:55,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:33:55,692 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:33:55,828 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f543f9edd90> has no local changes 2024-06-05 00:33:55,828 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:33:55,854 [ scc.git] DEBUG [detached HEAD dbfc10b] merge master -Dorg -Snone 2024-06-05 00:33:55,854 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-06-05 00:33:55,854 [ scc.merge] INFO Already up to date. 2024-06-05 00:33:55,854 [ scc.merge] INFO 2024-06-05 00:33:55,854 [ scc.merge] INFO 2024-06-05 00:33:55,855 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-05 00:33:55,855 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-06-05 00:33:58,359 [ scc.config] DEBUG Found github.token 2024-06-05 00:33:58,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-05 00:33:58,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:33:58,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:33:59,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-05 00:33:59,396 [ scc.gh] DEBUG 4314 remaining from 5000 (Reset at 00:06 2024-06-05 00:33:59,397 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:33:59,400 [ scc.git] DEBUG Check current status 2024-06-05 00:33:59,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:33:59,405 [ scc.git] DEBUG dbfc10b merge master -Dorg -Snone 2024-06-05 00:33:59,405 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:33:59,454 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-05 00:33:59,459 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-05 00:33:59,463 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-05 00:33:59,467 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-05 00:33:59,471 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-05 00:33:59,476 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:33:59,476 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-05 00:33:59,478 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-06-05 00:33:59,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-06-05 00:34:00,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:34:00,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:34:01,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:34:01,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:34:01,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:01,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-06-05 00:34:01,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:34:01,710 [ scc.git] DEBUG Check current status 2024-06-05 00:34:01,710 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:34:01,715 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-06-05 00:34:01,716 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:34:01,773 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:34:02,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-06-05 00:34:02,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:34:03,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:34:03,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:34:03,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:34:03,863 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:03,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:03,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-06-05 00:34:03,905 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:34:03,909 [ scc.git] DEBUG Check current status 2024-06-05 00:34:03,909 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:34:03,913 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-06-05 00:34:03,914 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:34:03,960 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:34:04,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-06-05 00:34:04,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:34:05,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:34:05,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:34:06,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:34:06,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:06,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:06,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-06-05 00:34:06,108 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:34:06,112 [ scc.git] DEBUG Check current status 2024-06-05 00:34:06,113 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:34:06,116 [ scc.git] DEBUG d3a65421 Merge pull request #410 from jburel/python_wheel 2024-06-05 00:34:06,117 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:34:06,160 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:34:06,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-06-05 00:34:07,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:34:07,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:34:07,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:34:08,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:34:08,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:08,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:08,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-06-05 00:34:08,421 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:34:08,425 [ scc.git] DEBUG Check current status 2024-06-05 00:34:08,426 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:34:08,430 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-05 00:34:08,430 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:34:08,523 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:34:08,525 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-05 00:34:08,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-06-05 00:34:09,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:34:09,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:34:10,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:34:10,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:34:10,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:10,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:10,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-06-05 00:34:10,627 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-05 00:34:10,632 [ scc.git] DEBUG Check current status 2024-06-05 00:34:10,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:34:10,636 [ scc.git] DEBUG 9c94fd493 Bump version: 5.26.0 → 5.26.1.dev0 2024-06-05 00:34:10,637 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:34:10,688 [ scc.config] DEBUG Found remote.origin.url 2024-06-05 00:34:11,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-06-05 00:34:11,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-05 00:34:11,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-05 00:34:12,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-05 00:34:12,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-05 00:34:12,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:12,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:12,824 [ scc.git] DEBUG Resetting... 2024-06-05 00:34:12,824 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-05 00:34:12,830 [ scc.git] DEBUG HEAD is now at dbfc10b merge master -Dorg -Snone 2024-06-05 00:34:12,830 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-05 00:34:12,883 [ scc.git] DEBUG Check current status 2024-06-05 00:34:12,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-05 00:34:12,887 [ scc.git] DEBUG dbfc10b merge master -Dorg -Snone 2024-06-05 00:34:12,888 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-05 00:34:12,928 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-06-05 00:34:12,931 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-06-05 00:34:12,935 [ scc.git] DEBUG d3a65421944d94d69c3d8aa63ebdebed8f4ddb29 omero-py (v5.19.2-10-gd3a65421) 2024-06-05 00:34:12,939 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-06-05 00:34:12,942 [ scc.git] DEBUG 9c94fd493eb94588de8432247e084be57d7ea928 omero-web (v5.26.0-1-g9c94fd493) 2024-06-05 00:34:12,942 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-05 00:34:12,943 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-05 00:34:12,943 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-05 00:34:12,943 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-05 00:34:12,943 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-05 00:34:12,943 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-05 00:34:12,943 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:34:13,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-06-05 00:34:13,218 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:34:13,218 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:13,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:13,223 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-05 00:34:13,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:34:13,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-05 00:34:13,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-05 00:34:13,238 [ scc.git] DEBUG Already up to date. 2024-06-05 00:34:13,238 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:34:13,238 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:13,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:13,242 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:34:13,281 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:13,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:13,285 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:34:13,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-06-05 00:34:14,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-06-05 00:34:14,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-06-05 00:34:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-06-05 00:34:15,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:16,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-06-05 00:34:16,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:16,573 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-06-05 00:34:16,573 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:34:16,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-06-05 00:34:16,573 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:16,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:16,578 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-05 00:34:16,583 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:34:16,583 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-05 00:34:16,589 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-05 00:34:16,596 [ scc.git] DEBUG Already up to date. 2024-06-05 00:34:16,597 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-06-05 00:34:16,991 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-06-05 00:34:16,992 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-06-05 00:34:16,996 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:34:16,996 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:16,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:17,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-06-05 00:34:17,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:17,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-06-05 00:34:17,092 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-06-05 00:34:17,093 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-06-05 00:34:17,094 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:34:17,097 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-06-05 00:34:17,097 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-06-05 00:34:17,098 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-06-05 00:34:17,099 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-06-05 00:34:17,100 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-06-05 00:34:17,100 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-06-05 00:34:17,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:34:17,257 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:34:17,300 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:17,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:17,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:17,347 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:34:17,353 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6c86c460> has no local changes 2024-06-05 00:34:17,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:34:17,362 [ scc.git] DEBUG [detached HEAD 571ef81] merge master -Dorg -Ssuccess-only 2024-06-05 00:34:17,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:17,363 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:34:17,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-06-05 00:34:18,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-06-05 00:34:18,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-06-05 00:34:19,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-06-05 00:34:19,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:20,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:34:20,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-06-05 00:34:21,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:21,060 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-06-05 00:34:21,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-06-05 00:34:22,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-06-05 00:34:22,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-06-05 00:34:22,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-06-05 00:34:22,976 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:34:22,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-06-05 00:34:22,977 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:22,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:22,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-05 00:34:22,985 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:34:22,985 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-05 00:34:22,991 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-05 00:34:22,997 [ scc.git] DEBUG Already up to date. 2024-06-05 00:34:22,997 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-06-05 00:34:23,417 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-06-05 00:34:23,417 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-06-05 00:34:23,422 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:34:23,422 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:23,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:23,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-06-05 00:34:23,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:23,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-06-05 00:34:23,447 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-06-05 00:34:23,448 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:34:23,451 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-06-05 00:34:23,452 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-06-05 00:34:23,452 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-06-05 00:34:23,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:34:23,616 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:34:23,659 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:23,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:23,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:34:23,705 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:34:23,711 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6b78bc40> has no local changes 2024-06-05 00:34:23,712 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:34:23,720 [ scc.git] DEBUG [detached HEAD 4156514] merge master -Dorg -Ssuccess-only 2024-06-05 00:34:23,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:34:23,721 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:34:24,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-06-05 00:34:24,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-06-05 00:34:25,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-06-05 00:34:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-06-05 00:34:26,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:26,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:34:27,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-06-05 00:34:27,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:28,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-06-05 00:34:28,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-06-05 00:34:28,703 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-06-05 00:34:29,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-06-05 00:34:29,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-06-05 00:34:30,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-06-05 00:34:30,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:31,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:34:31,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-06-05 00:34:32,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-06-05 00:34:32,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:33,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:34:33,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-06-05 00:34:34,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:34,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-06-05 00:34:35,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-06-05 00:34:35,105 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-06-05 00:34:35,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-06-05 00:34:35,595 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-06-05 00:34:36,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-06-05 00:34:36,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-06-05 00:34:37,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-06-05 00:34:37,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-06-05 00:34:37,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-06-05 00:34:38,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:38,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-06-05 00:34:39,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:39,377 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-06-05 00:34:39,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-06-05 00:34:40,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-06-05 00:34:40,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-06-05 00:34:41,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:41,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:34:42,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-06-05 00:34:42,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:43,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-06-05 00:34:43,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-06-05 00:34:43,578 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-06-05 00:34:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-06-05 00:34:44,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-06-05 00:34:45,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-06-05 00:34:45,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-06-05 00:34:46,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-06-05 00:34:46,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:46,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-06-05 00:34:47,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:47,381 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-06-05 00:34:47,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-06-05 00:34:48,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-06-05 00:34:48,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:49,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-06-05 00:34:49,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:49,719 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-06-05 00:34:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-06-05 00:34:50,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-06-05 00:34:51,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-06-05 00:34:51,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:52,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-06-05 00:34:52,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:52,574 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-06-05 00:34:53,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-06-05 00:34:53,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-06-05 00:34:54,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-06-05 00:34:54,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:34:54,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-06-05 00:34:55,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:34:55,365 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-06-05 00:34:55,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-06-05 00:34:56,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-06-05 00:34:56,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-06-05 00:34:57,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-06-05 00:34:57,273 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:34:57,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-06-05 00:34:57,274 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:34:57,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:34:57,280 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-05 00:34:57,288 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:34:57,288 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-05 00:34:57,294 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-05 00:34:57,300 [ scc.git] DEBUG Already up to date. 2024-06-05 00:34:57,300 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-06-05 00:34:57,788 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:34:57,788 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-06-05 00:34:57,794 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-06-05 00:34:58,199 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:34:58,199 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-06-05 00:34:58,204 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-06-05 00:34:58,614 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:34:58,614 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-06-05 00:34:58,619 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-06-05 00:34:59,016 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:34:59,017 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-06-05 00:34:59,021 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-06-05 00:34:59,451 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:34:59,452 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-06-05 00:34:59,457 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-06-05 00:34:59,819 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:34:59,819 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-06-05 00:34:59,824 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-06-05 00:35:00,218 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:35:00,219 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-06-05 00:35:00,225 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-06-05 00:35:00,676 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-06-05 00:35:00,676 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-06-05 00:35:00,682 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:35:00,682 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:00,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:00,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-06-05 00:35:00,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:00,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-06-05 00:35:00,758 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-06-05 00:35:00,758 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-06-05 00:35:00,759 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:00,764 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-06-05 00:35:00,764 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-06-05 00:35:00,764 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-06-05 00:35:00,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:00,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-06-05 00:35:00,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:00,945 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-06-05 00:35:01,046 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-06-05 00:35:01,046 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-06-05 00:35:01,047 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:01,054 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-06-05 00:35:01,054 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-06-05 00:35:01,055 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-06-05 00:35:01,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:01,344 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-06-05 00:35:01,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:01,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-06-05 00:35:01,430 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-06-05 00:35:01,430 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:01,434 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-06-05 00:35:01,434 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-06-05 00:35:01,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:01,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-06-05 00:35:01,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:01,771 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-06-05 00:35:01,878 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-06-05 00:35:01,879 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-06-05 00:35:01,881 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:01,885 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-06-05 00:35:01,885 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-06-05 00:35:01,885 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-06-05 00:35:02,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:02,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-06-05 00:35:02,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:02,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-06-05 00:35:02,227 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:02,230 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-06-05 00:35:02,230 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-06-05 00:35:02,230 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-06-05 00:35:02,230 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-06-05 00:35:02,230 [ scc.git] DEBUG create mode 100644 connect.py 2024-06-05 00:35:02,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:02,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-06-05 00:35:02,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:02,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-06-05 00:35:02,663 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-06-05 00:35:02,664 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:02,667 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-06-05 00:35:02,667 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-05 00:35:03,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:03,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-06-05 00:35:03,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:03,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-06-05 00:35:03,129 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-06-05 00:35:03,131 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:03,135 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-06-05 00:35:03,135 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-06-05 00:35:03,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:03,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-06-05 00:35:03,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:03,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-06-05 00:35:03,524 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-06-05 00:35:03,525 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:03,533 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-06-05 00:35:03,533 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-06-05 00:35:03,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:03,880 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:35:03,924 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:03,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:03,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:35:03,974 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:35:03,983 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6c86c430> has no local changes 2024-06-05 00:35:03,984 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:35:03,995 [ scc.git] DEBUG [detached HEAD fd4f6cad] merge master -Dorg -Ssuccess-only 2024-06-05 00:35:03,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:03,996 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-05 00:35:03,996 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:35:04,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-05 00:35:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-05 00:35:05,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-05 00:35:06,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-05 00:35:06,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-05 00:35:07,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-05 00:35:07,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-05 00:35:07,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-05 00:35:08,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:08,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-05 00:35:09,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-05 00:35:09,376 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-05 00:35:09,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-05 00:35:10,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-05 00:35:10,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-05 00:35:11,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-05 00:35:11,374 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:35:11,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-06-05 00:35:11,374 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:11,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:11,379 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-05 00:35:11,384 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:35:11,384 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-05 00:35:11,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-05 00:35:11,395 [ scc.git] DEBUG Already up to date. 2024-06-05 00:35:11,396 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-05 00:35:11,978 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-06-05 00:35:11,979 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-05 00:35:11,983 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:35:11,984 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:11,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:11,988 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-05 00:35:11,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:12,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-05 00:35:12,043 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-05 00:35:12,043 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-05 00:35:12,043 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-05 00:35:12,044 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-05 00:35:12,048 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-05 00:35:12,054 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-05 00:35:12,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:12,226 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-05 00:35:12,233 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-05 00:35:12,238 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#81](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-05 00:35:12,243 [ scc.config] DEBUG Found github.token 2024-06-05 00:35:12,243 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-05 00:35:12,243 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:35:12,286 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:12,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:12,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:35:12,331 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:35:12,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6b767640> has no local changes 2024-06-05 00:35:12,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:35:12,352 [ scc.git] DEBUG [detached HEAD 6cc90b8] merge master -Dorg -Ssuccess-only 2024-06-05 00:35:12,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:12,353 [ scc.repo] DEBUG ## PRs found: 2024-06-05 00:35:12,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-06-05 00:35:13,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/558 HTTP/1.1" 200 None 2024-06-05 00:35:13,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-06-05 00:35:14,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:14,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:35:15,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-06-05 00:35:15,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/575f7bbc72aad997963937297f08156ca6f7dd5e?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:16,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e HTTP/1.1" 200 None 2024-06-05 00:35:16,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/575f7bbc72aad997963937297f08156ca6f7dd5e/status HTTP/1.1" 200 None 2024-06-05 00:35:16,518 [ scc.repo] DEBUG - PR 558 jburel 'Update readme' 2024-06-05 00:35:17,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-06-05 00:35:17,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-06-05 00:35:17,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None 2024-06-05 00:35:18,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:18,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:35:19,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None 2024-06-05 00:35:19,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/59392ac61e24b2ee642c3cdcae6d3f8dd514394f?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:20,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f HTTP/1.1" 200 None 2024-06-05 00:35:20,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/59392ac61e24b2ee642c3cdcae6d3f8dd514394f/status HTTP/1.1" 200 None 2024-06-05 00:35:20,824 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-06-05 00:35:21,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None 2024-06-05 00:35:21,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-06-05 00:35:22,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-06-05 00:35:22,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-06-05 00:35:23,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-06-05 00:35:23,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:24,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:35:24,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-06-05 00:35:25,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:25,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-06-05 00:35:25,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-06-05 00:35:26,000 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-06-05 00:35:26,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-06-05 00:35:26,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-06-05 00:35:27,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-06-05 00:35:27,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:28,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:35:28,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-06-05 00:35:29,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:29,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-06-05 00:35:30,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-06-05 00:35:30,183 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-06-05 00:35:30,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-06-05 00:35:31,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-06-05 00:35:31,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-06-05 00:35:32,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-05 00:35:32,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-05 00:35:32,600 [ scc.repo] DEBUG ## Branches found: 2024-06-05 00:35:32,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-06-05 00:35:32,600 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:32,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:32,605 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-05 00:35:32,610 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-05 00:35:32,610 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-05 00:35:32,615 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-05 00:35:32,620 [ scc.git] DEBUG Already up to date. 2024-06-05 00:35:32,620 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-06-05 00:35:33,185 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-05 00:35:33,186 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-06-05 00:35:33,194 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-06-05 00:35:33,605 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-05 00:35:33,605 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-06-05 00:35:33,610 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-05 00:35:34,327 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-05 00:35:34,327 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-05 00:35:34,332 [ scc.git] DEBUG Calling 'git fetch origin pull/558/head' 2024-06-05 00:35:35,082 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-06-05 00:35:35,082 [ scc.git] DEBUG * branch refs/pull/558/head -> FETCH_HEAD 2024-06-05 00:35:35,087 [ scc.git] DEBUG ## Unique users: [] 2024-06-05 00:35:35,087 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:35,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:35,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-06-05 00:35:35,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:35,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-06-05 00:35:35,146 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-06-05 00:35:35,147 [ scc.git] DEBUG Auto-merging setup.py 2024-06-05 00:35:35,148 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:35,152 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-06-05 00:35:35,152 [ scc.git] DEBUG setup.py | 1 + 2024-06-05 00:35:35,152 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-06-05 00:35:35,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:35,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-06-05 00:35:35,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:35,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-06-05 00:35:35,432 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-06-05 00:35:35,433 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-06-05 00:35:35,434 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:35,439 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-06-05 00:35:35,439 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-06-05 00:35:35,439 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-06-05 00:35:35,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:35,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59392ac61e24b2ee642c3cdcae6d3f8dd514394f' 2024-06-05 00:35:35,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:35,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 59392ac61e24b2ee642c3cdcae6d3f8dd514394f' 2024-06-05 00:35:35,809 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-06-05 00:35:35,811 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:35,816 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 3 +++ 2024-06-05 00:35:35,816 [ scc.git] DEBUG .../templates/webclient/annotations/includes/core_metadata.html | 6 ++++++ 2024-06-05 00:35:35,816 [ scc.git] DEBUG omeroweb/webclient/tree.py | 7 +++++-- 2024-06-05 00:35:35,816 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-06-05 00:35:35,817 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 2 deletions(-) 2024-06-05 00:35:36,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:36,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-06-05 00:35:36,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:36,159 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 558 (Update readme) 575f7bbc72aad997963937297f08156ca6f7dd5e' 2024-06-05 00:35:36,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-05 00:35:36,179 [ scc.git] DEBUG README.rst | 42 +++++++++++++++++++++--------------------- 2024-06-05 00:35:36,179 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 21 deletions(-) 2024-06-05 00:35:36,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:36,566 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-05 00:35:36,609 [ scc.git] DEBUG Get sha1 of %s 2024-06-05 00:35:36,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-05 00:35:36,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:35:36,659 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:35:36,668 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d686f03d0> has no local changes 2024-06-05 00:35:36,668 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:35:36,679 [ scc.git] DEBUG [detached HEAD 9c9faeb98] merge master -Dorg -Ssuccess-only 2024-06-05 00:35:36,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:36,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-05 00:35:36,736 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-06-05 00:35:36,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:36,986 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-06-05 00:35:37,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:37,391 [ scc.config] DEBUG Found submodule.omero-py.url 2024-06-05 00:35:37,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:37,799 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-06-05 00:35:38,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:38,203 [ scc.config] DEBUG Found submodule.omero-web.url 2024-06-05 00:35:38,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-05 00:35:38,602 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-05 00:35:38,631 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6d6c860d90> has local changes 2024-06-05 00:35:38,631 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' - PR 558 jburel 'Update readme' Generated by OMERO-python-superbuild-push#81 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/81/)' 2024-06-05 00:35:38,640 [ scc.git] DEBUG [detached HEAD 262be51] merge master -Dorg -Ssuccess-only 2024-06-05 00:35:38,641 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-06-05 00:35:38,641 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-06-05 00:35:38,641 [ scc.merge] INFO Already up to date. 2024-06-05 00:35:38,641 [ scc.merge] INFO 2024-06-05 00:35:38,641 [ scc.merge] INFO 2024-06-05 00:35:38,641 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-06-05 00:35:38,641 [ scc.merge] INFO Already up to date. 2024-06-05 00:35:38,641 [ scc.merge] INFO 2024-06-05 00:35:38,641 [ scc.merge] INFO Merged PRs: 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-06-05 00:35:38,642 [ scc.merge] INFO 2024-06-05 00:35:38,642 [ scc.merge] INFO Repository: ome/omero-marshal 2024-06-05 00:35:38,642 [ scc.merge] INFO Excluded PRs: 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-06-05 00:35:38,642 [ scc.merge] INFO Already up to date. 2024-06-05 00:35:38,642 [ scc.merge] INFO 2024-06-05 00:35:38,642 [ scc.merge] INFO Merged PRs: 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-06-05 00:35:38,642 [ scc.merge] INFO 2024-06-05 00:35:38,642 [ scc.merge] INFO Repository: ome/omero-py 2024-06-05 00:35:38,642 [ scc.merge] INFO Excluded PRs: 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-06-05 00:35:38,642 [ scc.merge] INFO Already up to date. 2024-06-05 00:35:38,642 [ scc.merge] INFO 2024-06-05 00:35:38,642 [ scc.merge] INFO Merged PRs: 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-06-05 00:35:38,642 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-06-05 00:35:38,643 [ scc.merge] INFO 2024-06-05 00:35:38,643 [ scc.merge] INFO Repository: ome/omero-scripts 2024-06-05 00:35:38,643 [ scc.merge] INFO Excluded PRs: 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-05 00:35:38,643 [ scc.merge] INFO Already up to date. 2024-06-05 00:35:38,643 [ scc.merge] INFO 2024-06-05 00:35:38,643 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-05 00:35:38,643 [ scc.merge] INFO 2024-06-05 00:35:38,643 [ scc.merge] INFO Repository: ome/omero-web 2024-06-05 00:35:38,643 [ scc.merge] INFO Excluded PRs: 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-06-05 00:35:38,643 [ scc.merge] INFO Already up to date. 2024-06-05 00:35:38,643 [ scc.merge] INFO 2024-06-05 00:35:38,643 [ scc.merge] INFO Merged PRs: 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-06-05 00:35:38,643 [ scc.merge] INFO - PR 558 jburel 'Update readme' 2024-06-05 00:35:38,643 [ scc.merge] INFO 2024-06-05 00:35:38,643 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-05 00:35:38,643 [ scc.git] DEBUG Calling 'git remote' 2024-06-05 00:35:38,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-06-05 00:35:38,648 [ scc.git] DEBUG Calling 'git remote' 2024-06-05 00:35:38,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:38,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-06-05 00:35:38,652 [ scc.git] DEBUG Calling 'git remote' 2024-06-05 00:35:38,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:38,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-06-05 00:35:38,656 [ scc.git] DEBUG Calling 'git remote' 2024-06-05 00:35:38,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:38,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-06-05 00:35:38,660 [ scc.git] DEBUG Calling 'git remote' 2024-06-05 00:35:38,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-06-05 00:35:38,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-06-05 00:35:38,663 [ scc.git] DEBUG Calling 'git remote' 2024-06-05 00:35:38,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from d3a65421 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 5a90893 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 9c94fd493 nothing to commit, working tree clean HEAD detached from 05f561e nothing to commit, working tree clean 2024-06-05 00:36:08,614 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS