Started by upstream project "Trigger" build number 308 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 42aacf25de17d376508a27f59445c75cb63b7903 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Commit message: "Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a" > git rev-list --no-walk 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 271 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-13 00:42:34,212 [ scc.config] DEBUG Found github.token 2024-12-13 00:42:34,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-13 00:42:34,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:42:34,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:42:35,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-13 00:42:35,191 [ scc.gh] DEBUG 4676 remaining from 5000 (Reset at 01:12 2024-12-13 00:42:35,192 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:42:35,196 [ scc.git] DEBUG Check current status 2024-12-13 00:42:35,196 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:35,200 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-13 00:42:35,200 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:35,249 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-13 00:42:35,252 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-13 00:42:35,262 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-13 00:42:35,306 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-13 00:42:35,311 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-13 00:42:35,314 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-13 00:42:35,418 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-13 00:42:35,422 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-13 00:42:35,425 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-13 00:42:35,428 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-13 00:42:35,547 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-13 00:42:35,550 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-13 00:42:35,553 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-13 00:42:35,556 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-13 00:42:35,559 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-13 00:42:35,562 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-13 00:42:35,564 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-13 00:42:35,566 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-13 00:42:35,620 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-13 00:42:35,623 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-13 00:42:35,626 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-13 00:42:35,629 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-13 00:42:35,633 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:42:35,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-13 00:42:36,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:42:36,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:42:37,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:42:37,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:42:37,564 [ scc.git] DEBUG Resetting... 2024-12-13 00:42:37,564 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-13 00:42:37,573 [ scc.git] DEBUG HEAD is now at 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-13 00:42:37,573 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-13 00:42:37,672 [ scc.git] DEBUG Check current status 2024-12-13 00:42:37,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:37,676 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-13 00:42:37,676 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:37,722 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-13 00:42:37,725 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-13 00:42:37,729 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-13 00:42:37,731 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-13 00:42:37,736 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-13 00:42:37,739 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-13 00:42:37,742 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-13 00:42:37,745 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-13 00:42:37,748 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-13 00:42:37,752 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-13 00:42:37,755 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-13 00:42:37,757 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-13 00:42:37,761 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-13 00:42:37,763 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-13 00:42:37,767 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-13 00:42:37,770 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-13 00:42:37,773 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-13 00:42:37,775 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-13 00:42:37,778 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-13 00:42:37,781 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-13 00:42:37,784 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-13 00:42:37,787 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-13 00:42:37,788 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-13 00:42:37,788 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-13 00:42:37,788 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-13 00:42:37,789 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-13 00:42:37,789 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-13 00:42:37,789 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:42:38,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-13 00:42:38,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/422 HTTP/1.1" 200 None 2024-12-13 00:42:38,555 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:42:38,555 [ scc.repo] DEBUG - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-13 00:42:38,555 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:42:38,555 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:42:38,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:42:38,559 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:42:38,563 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:42:38,563 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:42:38,567 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:42:38,571 [ scc.git] DEBUG Already up to date. 2024-12-13 00:42:38,572 [ scc.git] DEBUG Calling 'git fetch origin pull/422/head' 2024-12-13 00:42:38,882 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-13 00:42:38,882 [ scc.git] DEBUG * branch refs/pull/422/head -> FETCH_HEAD 2024-12-13 00:42:38,888 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:42:38,888 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:42:38,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:42:38,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-13 00:42:38,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:42:38,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 422 (Bump omero-figure from `1dfb138` to `d5050d8`) c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-13 00:42:38,916 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:42:38,919 [ scc.git] DEBUG omero-figure | 2 +- 2024-12-13 00:42:38,919 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-13 00:42:39,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:42:39,069 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:42:39,577 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'd5050d8cd199b837ef234d08600cc4199538fb77' 2024-12-13 00:42:39,578 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:42:39,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:42:39,582 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:42:41,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f41ff778e20> has no local changes 2024-12-13 00:42:41,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:42:41,503 [ scc.git] DEBUG [detached HEAD ea6a559] merge master -Dorg -Snone 2024-12-13 00:42:41,503 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-13 00:42:41,503 [ scc.merge] INFO Already up to date. 2024-12-13 00:42:41,503 [ scc.merge] INFO 2024-12-13 00:42:41,503 [ scc.merge] INFO Merged PRs: 2024-12-13 00:42:41,503 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-13 00:42:41,503 [ scc.merge] INFO 2024-12-13 00:42:41,503 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-13 00:42:41,503 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-13 00:42:49,882 [ scc.config] DEBUG Found github.token 2024-12-13 00:42:49,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-13 00:42:50,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:42:50,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:42:50,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-13 00:42:50,878 [ scc.gh] DEBUG 4666 remaining from 5000 (Reset at 01:12 2024-12-13 00:42:50,879 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:42:50,883 [ scc.git] DEBUG Check current status 2024-12-13 00:42:50,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:50,887 [ scc.git] DEBUG ea6a559 merge master -Dorg -Snone 2024-12-13 00:42:50,887 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:50,934 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-13 00:42:50,937 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-13 00:42:50,940 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-13 00:42:50,943 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-13 00:42:50,962 [ scc.git] DEBUG d5050d8cd199b837ef234d08600cc4199538fb77 omero-figure (v7.1.0-248-gd5050d8c) 2024-12-13 00:42:50,965 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-13 00:42:50,968 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-13 00:42:50,972 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-13 00:42:50,975 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-13 00:42:50,977 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-13 00:42:50,980 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-13 00:42:50,983 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-13 00:42:50,986 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-13 00:42:50,988 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-13 00:42:50,992 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-13 00:42:50,994 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-13 00:42:50,997 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-13 00:42:50,999 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-13 00:42:51,002 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-13 00:42:51,005 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-13 00:42:51,007 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-13 00:42:51,011 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-13 00:42:51,015 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:42:51,015 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-13 00:42:51,017 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-13 00:42:51,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-13 00:42:51,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:42:52,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:42:52,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:42:53,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:42:53,161 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:42:53,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-13 00:42:53,232 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:42:53,235 [ scc.git] DEBUG Check current status 2024-12-13 00:42:53,235 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:53,239 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-13 00:42:53,239 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:53,278 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:42:53,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-13 00:42:54,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:42:54,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:42:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:42:55,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:42:55,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:42:55,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:42:55,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-13 00:42:55,416 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:42:55,420 [ scc.git] DEBUG Check current status 2024-12-13 00:42:55,420 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:55,423 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-13 00:42:55,424 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:55,462 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:42:55,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-13 00:42:56,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:42:56,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:42:57,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:42:57,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:42:57,599 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:42:57,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:42:57,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-13 00:42:57,640 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:42:57,644 [ scc.git] DEBUG Check current status 2024-12-13 00:42:57,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:57,648 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-13 00:42:57,648 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:57,692 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:42:58,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-13 00:42:58,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:42:58,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:42:59,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:42:59,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:42:59,743 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:42:59,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:42:59,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-13 00:42:59,785 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:42:59,790 [ scc.git] DEBUG Check current status 2024-12-13 00:42:59,790 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:42:59,794 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-13 00:42:59,795 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:42:59,841 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:00,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-13 00:43:00,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:01,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:01,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:01,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:01,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:01,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:01,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-13 00:43:01,987 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:01,992 [ scc.git] DEBUG Check current status 2024-12-13 00:43:01,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:02,065 [ scc.git] DEBUG d5050d8c Merge pull request #592 from will-moore/file_filter_group_owner_fixes 2024-12-13 00:43:02,066 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:02,112 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:02,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-13 00:43:02,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:03,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:03,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:04,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:04,102 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:04,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:04,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-13 00:43:04,143 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:04,147 [ scc.git] DEBUG Check current status 2024-12-13 00:43:04,147 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:04,151 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-13 00:43:04,151 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:04,190 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:04,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-13 00:43:05,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:05,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:06,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:06,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:06,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:06,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:06,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-13 00:43:06,753 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:06,757 [ scc.git] DEBUG Check current status 2024-12-13 00:43:06,757 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:06,760 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-13 00:43:06,761 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:06,799 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:07,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-13 00:43:07,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:08,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:08,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:08,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:08,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:09,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:09,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-13 00:43:09,018 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:09,022 [ scc.git] DEBUG Check current status 2024-12-13 00:43:09,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:09,026 [ scc.git] DEBUG b4102d4 add dev 2024-12-13 00:43:09,026 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:09,071 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:09,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-13 00:43:09,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:10,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:10,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:11,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:11,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:11,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:11,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-13 00:43:11,154 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:11,158 [ scc.git] DEBUG Check current status 2024-12-13 00:43:11,158 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:11,162 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-13 00:43:11,163 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:11,206 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:11,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-13 00:43:12,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:12,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:12,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:13,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:13,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:13,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:13,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-13 00:43:13,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:13,416 [ scc.git] DEBUG Check current status 2024-12-13 00:43:13,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:13,420 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-13 00:43:13,420 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:13,461 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:13,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-13 00:43:14,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:14,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:15,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:15,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:15,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:15,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-13 00:43:15,643 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:15,648 [ scc.git] DEBUG Check current status 2024-12-13 00:43:15,648 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:15,653 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-13 00:43:15,653 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:15,693 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:16,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-13 00:43:16,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:17,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:17,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:17,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:17,878 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:17,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:17,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-13 00:43:17,920 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:17,925 [ scc.git] DEBUG Check current status 2024-12-13 00:43:17,925 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:17,929 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-12-13 00:43:17,930 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:17,974 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:18,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-13 00:43:18,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:19,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:19,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:20,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:20,189 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:20,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:20,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-13 00:43:20,230 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:20,235 [ scc.git] DEBUG Check current status 2024-12-13 00:43:20,235 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:20,239 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-12-13 00:43:20,240 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:20,283 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-13 00:43:21,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:21,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:21,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:22,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:22,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:22,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:22,423 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-13 00:43:22,423 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:22,428 [ scc.git] DEBUG Check current status 2024-12-13 00:43:22,428 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:22,433 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-13 00:43:22,434 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:22,475 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:22,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-13 00:43:23,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:23,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:24,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:24,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:24,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:24,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:24,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-13 00:43:24,592 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:24,597 [ scc.git] DEBUG Check current status 2024-12-13 00:43:24,597 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:24,601 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-13 00:43:24,601 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:24,642 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:24,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-13 00:43:24,952 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-13 00:43:25,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-13 00:43:25,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:26,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:26,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:26,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:26,897 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:26,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:26,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-13 00:43:26,936 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:26,941 [ scc.git] DEBUG Check current status 2024-12-13 00:43:26,941 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:26,946 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-13 00:43:26,946 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:26,988 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:27,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-13 00:43:27,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:28,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:28,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:29,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:29,065 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:29,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:29,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-13 00:43:29,104 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:29,109 [ scc.git] DEBUG Check current status 2024-12-13 00:43:29,109 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:29,113 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-13 00:43:29,113 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:29,152 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:29,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-13 00:43:30,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:30,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:30,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:31,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:31,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:31,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:31,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-13 00:43:31,399 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:31,404 [ scc.git] DEBUG Check current status 2024-12-13 00:43:31,404 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:31,409 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-13 00:43:31,409 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:31,452 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:31,453 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-13 00:43:31,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-13 00:43:32,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:32,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:33,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:33,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:33,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:33,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:33,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-13 00:43:33,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:33,624 [ scc.git] DEBUG Check current status 2024-12-13 00:43:33,624 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:33,629 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-13 00:43:33,629 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:33,673 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:33,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-13 00:43:33,988 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-13 00:43:34,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-13 00:43:34,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:35,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:35,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:36,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:36,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:36,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:36,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-13 00:43:36,123 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:36,128 [ scc.git] DEBUG Check current status 2024-12-13 00:43:36,128 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:36,132 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-13 00:43:36,133 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:36,176 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:36,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-13 00:43:36,492 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-13 00:43:37,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-13 00:43:37,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:38,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:38,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:38,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:38,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:38,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:38,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-13 00:43:38,878 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:38,883 [ scc.git] DEBUG Check current status 2024-12-13 00:43:38,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:38,887 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-13 00:43:38,888 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:38,934 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:39,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-13 00:43:39,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:40,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:40,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:40,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:40,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:41,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:41,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-13 00:43:41,005 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-13 00:43:41,010 [ scc.git] DEBUG Check current status 2024-12-13 00:43:41,010 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:41,016 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-13 00:43:41,016 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:41,060 [ scc.config] DEBUG Found remote.origin.url 2024-12-13 00:43:41,061 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-13 00:43:41,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-13 00:43:41,406 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-13 00:43:41,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-13 00:43:42,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-13 00:43:42,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-13 00:43:42,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-13 00:43:43,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-13 00:43:43,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:43,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:43,331 [ scc.git] DEBUG Resetting... 2024-12-13 00:43:43,331 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-13 00:43:43,341 [ scc.git] DEBUG HEAD is now at ea6a559 merge master -Dorg -Snone 2024-12-13 00:43:43,342 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-13 00:43:43,441 [ scc.git] DEBUG Check current status 2024-12-13 00:43:43,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-13 00:43:43,447 [ scc.git] DEBUG ea6a559 merge master -Dorg -Snone 2024-12-13 00:43:43,447 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-13 00:43:43,494 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-13 00:43:43,497 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-13 00:43:43,500 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-13 00:43:43,503 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-13 00:43:43,508 [ scc.git] DEBUG d5050d8cd199b837ef234d08600cc4199538fb77 omero-figure (v7.1.0-248-gd5050d8c) 2024-12-13 00:43:43,510 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-13 00:43:43,513 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-13 00:43:43,517 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-13 00:43:43,520 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-13 00:43:43,523 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-13 00:43:43,526 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-13 00:43:43,528 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-13 00:43:43,531 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-13 00:43:43,533 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-13 00:43:43,537 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-13 00:43:43,539 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-13 00:43:43,542 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-13 00:43:43,544 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-13 00:43:43,547 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-13 00:43:43,550 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-13 00:43:43,553 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-13 00:43:43,556 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-13 00:43:43,557 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-13 00:43:43,557 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-13 00:43:43,557 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-13 00:43:43,557 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-13 00:43:43,557 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-13 00:43:43,557 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-13 00:43:43,558 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:43:43,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-13 00:43:44,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/422 HTTP/1.1" 200 None 2024-12-13 00:43:44,297 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:43:44,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f HTTP/1.1" 200 None 2024-12-13 00:43:45,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:43:45,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c6aa3d252793454fa925b76cfdce1ccff781d53f HTTP/1.1" 200 None 2024-12-13 00:43:46,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c6aa3d252793454fa925b76cfdce1ccff781d53f?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:43:46,398 [ scc.repo] DEBUG - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-13 00:43:46,398 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:43:46,398 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:46,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:46,404 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:43:46,408 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:43:46,408 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:43:46,413 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:43:46,418 [ scc.git] DEBUG Already up to date. 2024-12-13 00:43:46,418 [ scc.git] DEBUG Calling 'git fetch origin pull/422/head' 2024-12-13 00:43:46,733 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-13 00:43:46,733 [ scc.git] DEBUG * branch refs/pull/422/head -> FETCH_HEAD 2024-12-13 00:43:46,739 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:43:46,739 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:46,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:46,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-13 00:43:46,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:46,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 422 (Bump omero-figure from `1dfb138` to `d5050d8`) c6aa3d252793454fa925b76cfdce1ccff781d53f' 2024-12-13 00:43:46,759 [ scc.git] DEBUG Already up to date. 2024-12-13 00:43:46,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:43:46,909 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:43:46,962 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:46,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:46,968 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:43:47,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-13 00:43:47,324 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:43:47,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-13 00:43:47,324 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:47,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:47,330 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:43:47,335 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:43:47,335 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:43:47,340 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:43:47,345 [ scc.git] DEBUG Already up to date. 2024-12-13 00:43:47,345 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:43:47,345 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:47,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:47,349 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:43:47,388 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:47,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:47,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:47,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:43:47,440 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a99321e50> has no local changes 2024-12-13 00:43:47,441 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:43:47,450 [ scc.git] DEBUG [detached HEAD ee3e8e4] merge master -Dorg -Ssuccess-only 2024-12-13 00:43:47,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:47,450 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:43:47,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-13 00:43:48,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-13 00:43:48,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-13 00:43:48,747 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:43:48,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-13 00:43:48,748 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:48,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:48,754 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:43:48,759 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:43:48,759 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:43:48,765 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:43:48,771 [ scc.git] DEBUG Already up to date. 2024-12-13 00:43:48,772 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:43:48,772 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:48,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:48,777 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:43:48,817 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:48,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:48,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:48,863 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:43:48,870 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a99594850> has no local changes 2024-12-13 00:43:48,870 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:43:48,878 [ scc.git] DEBUG [detached HEAD 40fbfef] merge master -Dorg -Ssuccess-only 2024-12-13 00:43:48,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:48,879 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:43:49,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-13 00:43:49,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-13 00:43:50,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-13 00:43:50,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-13 00:43:51,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:43:51,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:43:52,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-13 00:43:52,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:43:52,770 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-13 00:43:53,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-13 00:43:53,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-13 00:43:53,663 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:43:53,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-13 00:43:53,663 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:53,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:53,670 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:43:53,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:43:53,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:43:53,682 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:43:53,688 [ scc.git] DEBUG Already up to date. 2024-12-13 00:43:53,688 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-13 00:43:54,121 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-13 00:43:54,122 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-13 00:43:54,127 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:43:54,127 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:54,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:54,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-13 00:43:54,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:54,142 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-13 00:43:54,202 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:43:54,205 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-13 00:43:54,205 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-13 00:43:54,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:43:54,373 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:43:54,415 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:43:54,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:43:54,420 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:43:54,460 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:43:54,467 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a98296f40> has no local changes 2024-12-13 00:43:54,467 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:43:54,476 [ scc.git] DEBUG [detached HEAD a26086b] merge master -Dorg -Ssuccess-only 2024-12-13 00:43:54,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:43:54,477 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:43:54,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-13 00:43:55,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-13 00:43:55,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-13 00:43:56,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-13 00:43:56,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-13 00:43:57,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:43:57,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:43:58,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-13 00:43:58,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-13 00:43:59,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-13 00:43:59,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-13 00:43:59,582 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-13 00:44:00,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-13 00:44:00,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-13 00:44:01,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-13 00:44:01,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-13 00:44:02,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:02,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-13 00:44:03,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:03,089 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-13 00:44:03,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-13 00:44:04,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-13 00:44:04,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-13 00:44:05,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:05,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-13 00:44:06,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:06,012 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-13 00:44:06,013 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:44:06,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-13 00:44:06,013 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:06,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:06,020 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:44:06,025 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:44:06,025 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:44:06,030 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:44:06,035 [ scc.git] DEBUG Already up to date. 2024-12-13 00:44:06,036 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-13 00:44:06,451 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-13 00:44:06,451 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-13 00:44:06,456 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-13 00:44:06,937 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-13 00:44:06,937 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-13 00:44:06,942 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-13 00:44:07,356 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-13 00:44:07,356 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-13 00:44:07,361 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:44:07,361 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:07,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:07,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-13 00:44:07,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:07,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-13 00:44:07,501 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-13 00:44:07,501 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-13 00:44:07,501 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-13 00:44:07,502 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:44:07,502 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:44:07,509 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-13 00:44:07,515 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-13 00:44:07,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:07,660 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-13 00:44:07,668 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-13 00:44:07,674 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-13 00:44:07,679 [ scc.config] DEBUG Found github.token 2024-12-13 00:44:07,679 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-13 00:44:07,679 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-13 00:44:07,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:07,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-13 00:44:07,734 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-13 00:44:07,734 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-13 00:44:07,734 [ scc.git] DEBUG Auto-merging setup.py 2024-12-13 00:44:07,734 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-13 00:44:07,734 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-13 00:44:07,734 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-13 00:44:07,734 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-13 00:44:07,734 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:44:07,734 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:44:07,740 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-13 00:44:07,746 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-13 00:44:08,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:08,064 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-13 00:44:08,072 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-13 00:44:08,080 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-12-13 00:44:08,086 [ scc.config] DEBUG Found github.token 2024-12-13 00:44:08,086 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-13 00:44:08,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-13 00:44:08,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:08,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-13 00:44:08,125 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-13 00:44:08,126 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-13 00:44:08,126 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:08,130 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-13 00:44:08,130 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-13 00:44:08,130 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-13 00:44:08,130 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-13 00:44:08,130 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-13 00:44:08,130 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-13 00:44:08,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:08,461 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:44:08,504 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:08,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:08,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:44:08,550 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:44:08,557 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a99321e80> has no local changes 2024-12-13 00:44:08,557 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:44:08,567 [ scc.git] DEBUG [detached HEAD a5cb561] merge master -Dorg -Ssuccess-only 2024-12-13 00:44:08,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:44:08,567 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:44:09,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-13 00:44:09,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-13 00:44:10,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/602 HTTP/1.1" 200 None 2024-12-13 00:44:10,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/602/comments HTTP/1.1" 200 None 2024-12-13 00:44:11,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d50055126e84c1d8f0a89fed314dec452f9f87cc HTTP/1.1" 200 None 2024-12-13 00:44:11,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d50055126e84c1d8f0a89fed314dec452f9f87cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:11,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d50055126e84c1d8f0a89fed314dec452f9f87cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:12,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d50055126e84c1d8f0a89fed314dec452f9f87cc HTTP/1.1" 200 None 2024-12-13 00:44:12,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d50055126e84c1d8f0a89fed314dec452f9f87cc?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:12,941 [ scc.repo] DEBUG - PR 602 will-moore 'Changelog 7.2.0' 2024-12-13 00:44:13,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-13 00:44:13,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-13 00:44:13,938 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:44:13,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-13 00:44:13,939 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:13,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:13,945 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:44:13,950 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:44:13,950 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:44:13,955 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:44:13,961 [ scc.git] DEBUG Already up to date. 2024-12-13 00:44:13,962 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2024-12-13 00:44:14,575 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-12-13 00:44:14,575 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2024-12-13 00:44:14,578 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:44:14,578 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:14,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:14,584 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d50055126e84c1d8f0a89fed314dec452f9f87cc' 2024-12-13 00:44:14,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:14,596 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Changelog 7.2.0) d50055126e84c1d8f0a89fed314dec452f9f87cc' 2024-12-13 00:44:14,610 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:14,612 [ scc.git] DEBUG CHANGELOG.md | 21 +++++++++++++++++++++ 2024-12-13 00:44:14,613 [ scc.git] DEBUG 1 file changed, 21 insertions(+) 2024-12-13 00:44:14,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:14,748 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:44:14,790 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:14,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:14,796 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:44:14,837 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:44:14,846 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a98241b20> has no local changes 2024-12-13 00:44:14,846 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 602 will-moore 'Changelog 7.2.0' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:44:14,856 [ scc.git] DEBUG [detached HEAD bbb6a2f9] merge master -Dorg -Ssuccess-only 2024-12-13 00:44:14,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:44:14,857 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:44:15,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-13 00:44:15,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-13 00:44:16,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-13 00:44:16,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-13 00:44:17,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:17,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-13 00:44:18,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:18,046 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-13 00:44:18,046 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:44:18,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-13 00:44:18,046 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:18,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:18,052 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:44:18,057 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:44:18,057 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:44:18,062 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:44:18,067 [ scc.git] DEBUG Already up to date. 2024-12-13 00:44:18,067 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-13 00:44:18,376 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-13 00:44:18,377 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-13 00:44:18,381 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:44:18,381 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:18,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:18,387 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-13 00:44:18,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:18,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-13 00:44:18,418 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-13 00:44:18,421 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:18,424 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-13 00:44:18,424 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-13 00:44:18,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:18,573 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:44:18,612 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:18,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:18,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:44:18,656 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:44:18,662 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a98287e50> has no local changes 2024-12-13 00:44:18,663 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:44:18,671 [ scc.git] DEBUG [detached HEAD 359a2ea] merge master -Dorg -Ssuccess-only 2024-12-13 00:44:18,671 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:44:18,671 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:44:19,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-13 00:44:19,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-13 00:44:20,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-13 00:44:20,073 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:20,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-13 00:44:21,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:21,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:22,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-13 00:44:22,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:22,924 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-13 00:44:23,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-13 00:44:23,426 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:24,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-13 00:44:24,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:25,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:25,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-13 00:44:25,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:25,919 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-13 00:44:26,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-13 00:44:26,375 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:26,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-13 00:44:27,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:27,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:28,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-13 00:44:28,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:28,924 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-13 00:44:29,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-13 00:44:29,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-13 00:44:29,839 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:30,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-13 00:44:30,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:31,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:31,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-13 00:44:32,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:32,404 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-13 00:44:32,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-13 00:44:32,879 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:33,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-13 00:44:33,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:34,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:34,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-13 00:44:35,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:35,354 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-13 00:44:35,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-13 00:44:35,811 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:36,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-13 00:44:36,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:37,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:37,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-13 00:44:38,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:38,357 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-13 00:44:38,357 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:44:38,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-13 00:44:38,358 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:38,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:38,363 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:44:38,368 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:44:38,368 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:44:38,373 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:44:38,379 [ scc.git] DEBUG Already up to date. 2024-12-13 00:44:38,379 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-13 00:44:38,714 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-13 00:44:38,714 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-13 00:44:38,719 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-13 00:44:39,003 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-13 00:44:39,003 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-13 00:44:39,008 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-13 00:44:39,296 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-13 00:44:39,296 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-13 00:44:39,301 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-13 00:44:39,594 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-13 00:44:39,594 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-13 00:44:39,599 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-13 00:44:39,903 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-13 00:44:39,904 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-13 00:44:39,908 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-13 00:44:40,196 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-13 00:44:40,196 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-13 00:44:40,201 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:44:40,201 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:40,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:40,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-13 00:44:40,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:40,220 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-13 00:44:40,232 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:40,237 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-13 00:44:40,237 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-13 00:44:40,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:40,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-13 00:44:40,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:40,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-13 00:44:40,530 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-13 00:44:40,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:40,536 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-13 00:44:40,536 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-13 00:44:40,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:40,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-13 00:44:40,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:40,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-13 00:44:40,988 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-13 00:44:40,988 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-13 00:44:40,988 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:44:40,988 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:44:40,995 [ scc.git] DEBUG Calling 'git reset --hard 287c6a7a998f00435b450418e02562f7c3eda637' 2024-12-13 00:44:41,003 [ scc.git] DEBUG HEAD is now at 287c6a7 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-13 00:44:41,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:41,169 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-13 00:44:41,176 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-13 00:44:41,181 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-13 00:44:41,186 [ scc.config] DEBUG Found github.token 2024-12-13 00:44:41,186 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-13 00:44:41,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-13 00:44:41,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:41,197 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-13 00:44:41,217 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-13 00:44:41,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:41,222 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-13 00:44:41,222 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-13 00:44:41,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:41,571 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-13 00:44:41,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:41,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-13 00:44:41,619 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-13 00:44:41,620 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:44:41,624 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-13 00:44:41,625 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-13 00:44:41,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:41,958 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-13 00:44:41,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:41,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-13 00:44:42,211 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-13 00:44:42,211 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-13 00:44:42,211 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:44:42,211 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:44:42,217 [ scc.git] DEBUG Calling 'git reset --hard 79e347270502675f26574dc35e9cd509222f6093' 2024-12-13 00:44:42,224 [ scc.git] DEBUG HEAD is now at 79e3472 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-13 00:44:42,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:44:42,363 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-13 00:44:42,369 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-13 00:44:42,375 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-13 00:44:42,381 [ scc.config] DEBUG Found github.token 2024-12-13 00:44:42,381 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-13 00:44:43,198 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-13 00:44:43,199 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:44:43,238 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:43,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:43,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:44:43,283 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:44:43,291 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a98272f40> has no local changes 2024-12-13 00:44:43,291 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:44:43,300 [ scc.git] DEBUG [detached HEAD 6dd288d] merge master -Dorg -Ssuccess-only 2024-12-13 00:44:43,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:44:43,300 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:44:43,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-13 00:44:44,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-13 00:44:44,263 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-13 00:44:44,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-13 00:44:45,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:45,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:46,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-13 00:44:46,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:46,847 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-13 00:44:47,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-13 00:44:47,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-13 00:44:48,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-13 00:44:48,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-13 00:44:49,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-13 00:44:49,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:50,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:50,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-13 00:44:51,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:51,163 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-13 00:44:51,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-13 00:44:52,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-13 00:44:52,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-13 00:44:53,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:53,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:44:54,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-13 00:44:54,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:54,513 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-13 00:44:54,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-13 00:44:55,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-13 00:44:55,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-13 00:44:56,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:44:56,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-13 00:44:57,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:44:57,364 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-13 00:44:57,365 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:44:57,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-13 00:44:57,365 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:44:57,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:44:57,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:44:57,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:44:57,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:44:57,383 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:44:57,389 [ scc.git] DEBUG Already up to date. 2024-12-13 00:44:57,389 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-13 00:44:59,779 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-13 00:44:59,779 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-13 00:44:59,784 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-13 00:45:00,753 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-13 00:45:00,753 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-13 00:45:00,758 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-13 00:45:01,133 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-13 00:45:01,133 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-13 00:45:01,138 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-13 00:45:01,427 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-13 00:45:01,427 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-13 00:45:01,431 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:01,432 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:01,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:01,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-13 00:45:01,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:01,448 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-13 00:45:01,568 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-13 00:45:01,568 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:01,572 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-13 00:45:01,572 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-13 00:45:01,572 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-13 00:45:01,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:01,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-13 00:45:01,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:01,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-13 00:45:01,907 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-13 00:45:01,908 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-13 00:45:01,908 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-13 00:45:01,908 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-13 00:45:01,908 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:01,913 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-13 00:45:01,913 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-13 00:45:01,913 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-13 00:45:01,913 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-13 00:45:01,913 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-13 00:45:01,913 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-13 00:45:01,913 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-13 00:45:01,913 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-13 00:45:02,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:02,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-13 00:45:02,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:02,122 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-13 00:45:02,147 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-13 00:45:02,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:02,150 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-13 00:45:02,150 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-13 00:45:02,150 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-13 00:45:02,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:02,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-13 00:45:02,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:02,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-13 00:45:02,619 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:02,629 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-13 00:45:02,629 [ scc.git] DEBUG package.json | 2 +- 2024-12-13 00:45:02,629 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-13 00:45:02,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:02,897 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:02,936 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:02,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:02,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:02,982 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:02,992 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981ea610> has no local changes 2024-12-13 00:45:02,992 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:03,005 [ scc.git] DEBUG [detached HEAD 753a03d] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:03,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:03,006 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:03,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-13 00:45:03,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-13 00:45:04,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-13 00:45:04,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-13 00:45:05,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:05,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-13 00:45:06,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:06,391 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-13 00:45:06,391 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:06,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-13 00:45:06,391 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:06,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:06,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:06,403 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:06,403 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:06,409 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:06,415 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:06,415 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-13 00:45:07,203 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-13 00:45:07,204 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-13 00:45:07,208 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:07,209 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:07,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:07,215 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-13 00:45:07,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:07,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-13 00:45:07,239 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:07,242 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-13 00:45:07,242 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-13 00:45:07,242 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-13 00:45:07,243 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-13 00:45:07,243 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-13 00:45:07,243 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-13 00:45:07,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:07,386 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:07,429 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:07,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:07,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:07,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:07,485 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981fcbb0> has no local changes 2024-12-13 00:45:07,485 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:07,495 [ scc.git] DEBUG [detached HEAD d8aea75] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:07,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:07,496 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:07,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-13 00:45:08,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-13 00:45:08,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-13 00:45:09,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-13 00:45:09,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:10,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-13 00:45:10,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:10,888 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-13 00:45:11,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-13 00:45:11,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-13 00:45:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-13 00:45:12,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:13,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-13 00:45:13,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:13,791 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-13 00:45:13,791 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:13,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-13 00:45:13,791 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:13,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:13,797 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:13,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:13,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:13,808 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:13,813 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:13,813 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-13 00:45:14,714 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-13 00:45:14,714 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-13 00:45:14,719 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-13 00:45:15,301 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-13 00:45:15,301 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-13 00:45:15,306 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:15,306 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:15,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:15,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-13 00:45:15,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:15,324 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-13 00:45:15,634 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-13 00:45:15,634 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-13 00:45:15,634 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-13 00:45:15,634 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-13 00:45:15,634 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:45:15,634 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:45:15,641 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-13 00:45:15,648 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-13 00:45:15,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:15,784 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-13 00:45:15,792 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-13 00:45:15,856 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-12-13 00:45:15,862 [ scc.config] DEBUG Found github.token 2024-12-13 00:45:15,863 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-13 00:45:15,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-13 00:45:15,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:15,881 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-13 00:45:15,991 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-13 00:45:15,991 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-13 00:45:15,992 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-13 00:45:15,992 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:45:15,992 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:45:15,999 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-13 00:45:16,008 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-13 00:45:16,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:16,174 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-13 00:45:16,182 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-13 00:45:16,188 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-13 00:45:16,194 [ scc.config] DEBUG Found github.token 2024-12-13 00:45:16,194 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-13 00:45:16,194 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:16,236 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:16,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:16,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:16,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:16,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981a4880> has no local changes 2024-12-13 00:45:16,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:16,300 [ scc.git] DEBUG [detached HEAD 8c25cad] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:16,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:16,301 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:16,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-13 00:45:17,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-13 00:45:17,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-13 00:45:18,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-13 00:45:18,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-13 00:45:19,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-13 00:45:19,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-13 00:45:20,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-13 00:45:20,242 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:20,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-13 00:45:20,242 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:20,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:20,248 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:20,254 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:20,254 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:20,259 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:20,264 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:20,265 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:20,265 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:20,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:20,269 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:20,309 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:20,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:20,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:20,355 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:20,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981a4670> has no local changes 2024-12-13 00:45:20,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:20,377 [ scc.git] DEBUG [detached HEAD 014dccb] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:20,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:20,378 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:20,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-12-13 00:45:21,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None 2024-12-13 00:45:21,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None 2024-12-13 00:45:22,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:22,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:45:23,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-12-13 00:45:23,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-13 00:45:24,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:24,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-12-13 00:45:25,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:25,192 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-12-13 00:45:25,192 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:25,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-13 00:45:25,192 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:25,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:25,198 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:25,203 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:25,204 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:25,208 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:25,213 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:25,214 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-13 00:45:25,555 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-12-13 00:45:25,555 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-13 00:45:25,560 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:25,560 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:25,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:25,566 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-13 00:45:25,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:25,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-12-13 00:45:25,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:25,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:25,728 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:25,768 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:25,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:25,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:25,812 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:25,817 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a9821ba30> has no local changes 2024-12-13 00:45:25,817 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:25,825 [ scc.git] DEBUG [detached HEAD 11327e4] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:25,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:25,825 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:26,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-13 00:45:26,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None 2024-12-13 00:45:27,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-13 00:45:27,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:28,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-13 00:45:28,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:29,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-12-13 00:45:29,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None 2024-12-13 00:45:29,837 [ scc.repo] DEBUG - PR 29 jburel 'Build' 2024-12-13 00:45:30,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-12-13 00:45:30,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-13 00:45:31,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-13 00:45:31,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-13 00:45:32,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:32,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-13 00:45:33,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:33,098 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-13 00:45:33,098 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:33,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-13 00:45:33,098 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:33,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:33,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:33,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:33,110 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:33,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:33,120 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:33,120 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-13 00:45:33,654 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-13 00:45:33,654 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-13 00:45:33,659 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2024-12-13 00:45:34,312 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-13 00:45:34,312 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2024-12-13 00:45:34,317 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:34,317 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:34,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:34,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-13 00:45:34,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:34,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-13 00:45:34,344 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-13 00:45:34,345 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:34,347 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-13 00:45:34,347 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-13 00:45:34,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:34,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-13 00:45:34,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:34,496 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-12-13 00:45:34,561 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:34,564 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-13 00:45:34,564 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-13 00:45:34,564 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-) 2024-12-13 00:45:34,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:34,895 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:34,936 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:34,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:34,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:34,979 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:34,985 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981d5220> has no local changes 2024-12-13 00:45:34,986 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:34,993 [ scc.git] DEBUG [detached HEAD ef769d2] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:34,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:34,994 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:35,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-13 00:45:35,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None 2024-12-13 00:45:36,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-13 00:45:36,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:37,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:45:37,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-12-13 00:45:38,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:38,250 [ scc.repo] DEBUG - PR 21 jburel 'Build' 2024-12-13 00:45:38,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-13 00:45:39,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-13 00:45:39,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-13 00:45:40,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:40,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-13 00:45:40,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:40,997 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-13 00:45:40,998 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:40,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-13 00:45:40,998 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:40,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:41,004 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:41,009 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:41,009 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:41,014 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:41,020 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:41,020 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-13 00:45:41,348 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-13 00:45:41,348 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-13 00:45:41,353 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2024-12-13 00:45:41,808 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-13 00:45:41,808 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2024-12-13 00:45:41,813 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:41,813 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:41,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:41,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-13 00:45:41,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:41,831 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-13 00:45:41,865 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG Auto-merging setup.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-13 00:45:41,866 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:45:41,866 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:45:41,872 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-13 00:45:41,879 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-12-13 00:45:42,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:42,019 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-13 00:45:42,025 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-12-13 00:45:42,032 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2024-12-13 00:45:42,037 [ scc.config] DEBUG Found github.token 2024-12-13 00:45:42,038 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-13 00:45:42,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-13 00:45:42,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:42,048 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-12-13 00:45:42,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:42,061 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-13 00:45:42,061 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-13 00:45:42,061 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-13 00:45:42,061 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-13 00:45:42,061 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-13 00:45:42,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:42,414 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:42,455 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:42,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:42,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:42,500 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:42,507 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981d5340> has no local changes 2024-12-13 00:45:42,507 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:42,516 [ scc.git] DEBUG [detached HEAD 260d696] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:42,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:42,517 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:42,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-13 00:45:43,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2024-12-13 00:45:43,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2024-12-13 00:45:44,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2024-12-13 00:45:44,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:45,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:45:45,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2024-12-13 00:45:46,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2024-12-13 00:45:46,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-13 00:45:47,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-13 00:45:47,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-13 00:45:48,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:48,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-13 00:45:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:49,159 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-13 00:45:49,159 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:49,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-13 00:45:49,159 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:49,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:49,165 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:49,170 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:49,170 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:49,177 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:49,183 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:49,183 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-13 00:45:49,544 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-13 00:45:49,544 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-13 00:45:49,548 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:49,548 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:49,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:49,553 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-13 00:45:49,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:49,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-13 00:45:49,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:49,586 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-13 00:45:49,586 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-13 00:45:49,587 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-13 00:45:49,587 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-13 00:45:49,587 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-13 00:45:49,587 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-13 00:45:49,587 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-13 00:45:49,587 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-13 00:45:49,589 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-13 00:45:49,589 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-13 00:45:49,590 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-13 00:45:49,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:49,758 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:49,796 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:49,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:49,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:49,838 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:49,844 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981a9c70> has no local changes 2024-12-13 00:45:49,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:49,853 [ scc.git] DEBUG [detached HEAD ab72722] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:49,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:49,853 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:50,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-13 00:45:50,176 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:50,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-13 00:45:50,176 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:50,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:50,181 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:50,186 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:50,186 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:50,191 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:50,196 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:50,196 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:50,196 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:50,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:50,201 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:50,237 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:50,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:50,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:50,278 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:50,284 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981f7bb0> has no local changes 2024-12-13 00:45:50,284 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:50,291 [ scc.git] DEBUG [detached HEAD a5617ba] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:50,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:50,292 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:50,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-13 00:45:51,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-13 00:45:51,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-13 00:45:52,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:52,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:45:53,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-13 00:45:53,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:45:53,754 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-13 00:45:53,754 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:45:53,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-13 00:45:53,754 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:53,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:53,761 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:45:53,765 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:45:53,765 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:45:53,771 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:45:53,776 [ scc.git] DEBUG Already up to date. 2024-12-13 00:45:53,776 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-13 00:45:54,394 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-13 00:45:54,394 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-13 00:45:54,399 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:45:54,399 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:54,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:54,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-13 00:45:54,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:54,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-13 00:45:54,469 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:45:54,471 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-13 00:45:54,471 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-13 00:45:54,471 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-13 00:45:54,471 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-13 00:45:54,471 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-13 00:45:54,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:45:54,602 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:45:54,643 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:45:54,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:45:54,649 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:45:54,689 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:45:54,696 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a981adf70> has no local changes 2024-12-13 00:45:54,696 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:45:54,706 [ scc.git] DEBUG [detached HEAD ab90b85] merge master -Dorg -Ssuccess-only 2024-12-13 00:45:54,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:45:54,706 [ scc.git] INFO Overriding base-branch from master to main 2024-12-13 00:45:54,706 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:45:55,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-13 00:45:55,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-13 00:45:56,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-13 00:45:56,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-13 00:45:57,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:45:57,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:45:58,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None 2024-12-13 00:45:58,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None 2024-12-13 00:45:59,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None 2024-12-13 00:45:59,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:46:00,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:46:00,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-13 00:46:01,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-13 00:46:01,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-13 00:46:02,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-13 00:46:02,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:46:03,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-13 00:46:03,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:46:03,720 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-13 00:46:03,721 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:46:03,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-13 00:46:03,721 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:03,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:03,727 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-13 00:46:03,732 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:46:03,732 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-13 00:46:03,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-13 00:46:03,744 [ scc.git] DEBUG Already up to date. 2024-12-13 00:46:03,744 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-13 00:46:04,236 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-13 00:46:04,236 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-13 00:46:04,241 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:46:04,241 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:04,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:04,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-13 00:46:04,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:04,257 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-13 00:46:04,277 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-13 00:46:04,277 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-13 00:46:04,277 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:46:04,278 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:46:04,283 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-13 00:46:04,288 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-12-13 00:46:04,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:04,447 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-13 00:46:04,453 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-12-13 00:46:04,458 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-13 00:46:04,462 [ scc.config] DEBUG Found github.token 2024-12-13 00:46:04,463 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-13 00:46:04,463 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:46:04,500 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:04,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:04,505 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:46:04,542 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:46:04,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a98143af0> has no local changes 2024-12-13 00:46:04,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:46:04,556 [ scc.git] DEBUG [detached HEAD cbc3c6d] merge master -Dorg -Ssuccess-only 2024-12-13 00:46:04,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:04,556 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:46:04,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-13 00:46:04,859 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:46:04,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-13 00:46:04,860 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:04,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:04,865 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:46:04,870 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:46:04,870 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:46:04,875 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:46:04,880 [ scc.git] DEBUG Already up to date. 2024-12-13 00:46:04,880 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:46:04,880 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:04,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:04,885 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:46:04,923 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:04,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:04,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:46:04,965 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:46:04,971 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a98143a30> has no local changes 2024-12-13 00:46:04,971 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:46:04,978 [ scc.git] DEBUG [detached HEAD 4cd67eb] merge master -Dorg -Ssuccess-only 2024-12-13 00:46:04,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:04,979 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:46:05,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-13 00:46:05,298 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:46:05,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-13 00:46:05,298 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:05,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:05,304 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:46:05,309 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:46:05,309 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:46:05,314 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:46:05,319 [ scc.git] DEBUG Already up to date. 2024-12-13 00:46:05,319 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:46:05,319 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:05,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:05,324 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:46:05,361 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:05,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:05,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:46:05,404 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:46:05,410 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a980e88b0> has no local changes 2024-12-13 00:46:05,410 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:46:05,419 [ scc.git] DEBUG [detached HEAD 0a4df60] merge master -Dorg -Ssuccess-only 2024-12-13 00:46:05,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:05,420 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:46:05,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-13 00:46:06,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-13 00:46:06,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-13 00:46:07,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-13 00:46:07,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:46:08,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-13 00:46:08,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:46:08,714 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-13 00:46:08,714 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:46:08,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-13 00:46:08,715 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:08,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:08,721 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-13 00:46:08,727 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:46:08,727 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-13 00:46:08,733 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-13 00:46:08,739 [ scc.git] DEBUG Already up to date. 2024-12-13 00:46:08,739 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-13 00:46:09,086 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-13 00:46:09,086 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-13 00:46:09,090 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:46:09,090 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:09,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:09,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-13 00:46:09,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:09,109 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-13 00:46:09,180 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-13 00:46:09,180 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-13 00:46:09,180 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:46:09,181 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:46:09,187 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-13 00:46:09,195 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-13 00:46:09,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:09,339 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-13 00:46:09,346 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-13 00:46:09,352 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-13 00:46:09,357 [ scc.config] DEBUG Found github.token 2024-12-13 00:46:09,358 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-13 00:46:09,358 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:46:09,398 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:09,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:09,404 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:46:09,443 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:46:09,449 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a980e85b0> has no local changes 2024-12-13 00:46:09,449 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:46:09,457 [ scc.git] DEBUG [detached HEAD 578817f] merge master -Dorg -Ssuccess-only 2024-12-13 00:46:09,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:09,457 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-13 00:46:09,457 [ scc.repo] DEBUG ## PRs found: 2024-12-13 00:46:09,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-13 00:46:10,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-13 00:46:10,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-13 00:46:11,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-13 00:46:11,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:46:12,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-13 00:46:12,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-13 00:46:13,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:46:13,189 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-13 00:46:13,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-12-13 00:46:14,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-12-13 00:46:14,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-12-13 00:46:15,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-13 00:46:15,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-13 00:46:16,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-13 00:46:16,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-13 00:46:16,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-13 00:46:17,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-13 00:46:17,384 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-13 00:46:17,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-13 00:46:18,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-13 00:46:18,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-13 00:46:19,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-13 00:46:19,323 [ scc.repo] DEBUG ## Branches found: 2024-12-13 00:46:19,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-13 00:46:19,323 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:19,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:19,330 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-13 00:46:19,335 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-13 00:46:19,335 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-13 00:46:19,341 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-13 00:46:19,346 [ scc.git] DEBUG Already up to date. 2024-12-13 00:46:19,347 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-13 00:46:19,827 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-13 00:46:19,827 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-13 00:46:19,831 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-13 00:46:20,680 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-13 00:46:20,680 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-13 00:46:20,684 [ scc.git] DEBUG ## Unique users: [] 2024-12-13 00:46:20,685 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:20,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:20,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-13 00:46:20,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:20,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-13 00:46:20,766 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-12-13 00:46:20,766 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-12-13 00:46:20,766 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-13 00:46:20,766 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-13 00:46:20,773 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-13 00:46:20,780 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-12-13 00:46:20,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:20,936 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-13 00:46:20,944 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-13 00:46:20,950 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#277](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-13 00:46:20,955 [ scc.config] DEBUG Found github.token 2024-12-13 00:46:20,956 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-13 00:46:20,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-13 00:46:20,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:20,967 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-13 00:46:20,977 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-13 00:46:20,980 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-13 00:46:20,980 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-13 00:46:21,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:21,332 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-13 00:46:21,373 [ scc.git] DEBUG Get sha1 of %s 2024-12-13 00:46:21,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-13 00:46:21,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:46:21,417 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:46:21,424 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a9816df10> has no local changes 2024-12-13 00:46:21,425 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:46:21,433 [ scc.git] DEBUG [detached HEAD c1e9d5a] merge master -Dorg -Ssuccess-only 2024-12-13 00:46:21,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:21,433 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-13 00:46:21,508 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-13 00:46:21,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:21,742 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-13 00:46:21,747 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-13 00:46:22,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:22,130 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-13 00:46:22,134 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-13 00:46:22,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:22,531 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-13 00:46:22,536 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-13 00:46:22,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:22,986 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-13 00:46:23,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:23,362 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-13 00:46:23,368 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-13 00:46:23,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:23,752 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-13 00:46:23,757 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-13 00:46:24,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:24,131 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-13 00:46:24,136 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-13 00:46:24,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:24,522 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-13 00:46:24,526 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-13 00:46:24,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:24,900 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-13 00:46:24,905 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-13 00:46:25,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:25,296 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-13 00:46:25,300 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-13 00:46:25,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:25,679 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-13 00:46:25,683 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-13 00:46:26,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:26,113 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-13 00:46:26,118 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-13 00:46:26,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:26,503 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-13 00:46:26,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:26,884 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-13 00:46:27,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:27,274 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-13 00:46:27,279 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-13 00:46:27,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:27,708 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-13 00:46:28,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:28,097 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-13 00:46:28,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:28,478 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-13 00:46:28,483 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-13 00:46:28,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:28,862 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-13 00:46:28,867 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-13 00:46:29,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:29,287 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-13 00:46:29,291 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-13 00:46:29,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:29,679 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-13 00:46:29,685 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-13 00:46:30,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-13 00:46:30,073 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-13 00:46:30,073 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-13 00:46:30,154 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0a9b6a4e20> has local changes 2024-12-13 00:46:30,154 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 602 will-moore 'Changelog 7.2.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#277 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/277/)' 2024-12-13 00:46:30,169 [ scc.git] DEBUG [detached HEAD bd0ae7b] merge master -Dorg -Ssuccess-only 2024-12-13 00:46:30,169 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-13 00:46:30,169 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-13 00:46:30,169 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,169 [ scc.merge] INFO 2024-12-13 00:46:30,169 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 422 dependabot[bot] 'Bump omero-figure from `1dfb138` to `d5050d8`' 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-13 00:46:30,170 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-13 00:46:30,170 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-13 00:46:30,170 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-13 00:46:30,170 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-13 00:46:30,170 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-13 00:46:30,170 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-13 00:46:30,170 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-13 00:46:30,170 [ scc.merge] INFO 2024-12-13 00:46:30,170 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-13 00:46:30,170 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-13 00:46:30,170 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-13 00:46:30,171 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,171 [ scc.merge] INFO 2024-12-13 00:46:30,171 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0' 2024-12-13 00:46:30,171 [ scc.merge] INFO 2024-12-13 00:46:30,171 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-13 00:46:30,171 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,171 [ scc.merge] INFO 2024-12-13 00:46:30,171 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-13 00:46:30,171 [ scc.merge] INFO 2024-12-13 00:46:30,171 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-13 00:46:30,171 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,171 [ scc.merge] INFO 2024-12-13 00:46:30,171 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-13 00:46:30,171 [ scc.merge] INFO 2024-12-13 00:46:30,171 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,171 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-13 00:46:30,172 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-13 00:46:30,172 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-13 00:46:30,172 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-13 00:46:30,172 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-13 00:46:30,172 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,172 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-13 00:46:30,172 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-13 00:46:30,172 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-13 00:46:30,172 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,172 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-13 00:46:30,173 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure) 2024-12-13 00:46:30,173 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-13 00:46:30,173 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-13 00:46:30,173 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 29 jburel 'Build' 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-13 00:46:30,173 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 21 jburel 'Build' 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-13 00:46:30,173 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2024-12-13 00:46:30,173 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,173 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,173 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-13 00:46:30,173 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-13 00:46:30,174 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-13 00:46:30,174 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-13 00:46:30,174 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure) 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-13 00:46:30,174 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-13 00:46:30,174 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-13 00:46:30,174 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-13 00:46:30,174 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-13 00:46:30,174 [ scc.merge] INFO 2024-12-13 00:46:30,174 [ scc.merge] INFO Repository: ome/scripts 2024-12-13 00:46:30,174 [ scc.merge] INFO Excluded PRs: 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-12-13 00:46:30,174 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-13 00:46:30,175 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-13 00:46:30,175 [ scc.merge] INFO Already up to date. 2024-12-13 00:46:30,175 [ scc.merge] INFO 2024-12-13 00:46:30,175 [ scc.merge] INFO Merged PRs: 2024-12-13 00:46:30,175 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-13 00:46:30,175 [ scc.merge] INFO 2024-12-13 00:46:30,175 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-13 00:46:30,175 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-13 00:46:30,175 [ scc.merge] INFO 2024-12-13 00:46:30,175 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-13 00:46:30,175 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-13 00:46:30,181 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-13 00:46:30,187 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-13 00:46:30,192 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-13 00:46:30,198 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-13 00:46:30,203 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-13 00:46:30,207 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-13 00:46:30,213 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-13 00:46:30,218 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-13 00:46:30,223 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-13 00:46:30,228 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-13 00:46:30,233 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-13 00:46:30,240 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-13 00:46:30,245 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-13 00:46:30,250 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-13 00:46:30,254 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-13 00:46:30,260 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-13 00:46:30,265 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-13 00:46:30,270 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-13 00:46:30,275 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-13 00:46:30,281 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,286 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-13 00:46:30,287 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-13 00:46:30,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-13 00:46:30,293 [ scc.git] DEBUG Calling 'git remote' 2024-12-13 00:46:30,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD d705273] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from d5050d8c nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 2c59722] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-13 00:47:17,032 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-13 00:47:25,975 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-13 00:47:28,378 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-13 00:47:32,871 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-13 00:48:15,218 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS