Started by upstream project "Trigger" build number 322 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 282 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-27 00:42:47,738 [ scc.config] DEBUG Found github.token 2024-12-27 00:42:47,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-27 00:42:47,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:42:48,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:42:48,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-27 00:42:48,714 [ scc.gh] DEBUG 4110 remaining from 5000 (Reset at 01:12 2024-12-27 00:42:48,714 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:42:48,719 [ scc.git] DEBUG Check current status 2024-12-27 00:42:48,719 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:42:48,723 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-27 00:42:48,723 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:42:48,772 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-27 00:42:48,775 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-27 00:42:48,938 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-27 00:42:48,943 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-27 00:42:48,948 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-27 00:42:48,952 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-27 00:42:48,956 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-27 00:42:48,961 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-27 00:42:48,965 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-27 00:42:48,969 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-27 00:42:48,973 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-27 00:42:48,997 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-27 00:42:49,001 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-27 00:42:49,004 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-27 00:42:49,008 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-27 00:42:49,011 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-27 00:42:49,015 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-27 00:42:49,056 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-27 00:42:49,059 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-27 00:42:49,062 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-27 00:42:49,065 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-27 00:42:49,069 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-27 00:42:49,075 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:42:49,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-27 00:42:49,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:42:50,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:42:50,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:42:51,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:42:51,042 [ scc.git] DEBUG Resetting... 2024-12-27 00:42:51,042 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-27 00:42:51,051 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-27 00:42:51,051 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-27 00:42:51,177 [ scc.git] DEBUG Check current status 2024-12-27 00:42:51,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:42:51,182 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-27 00:42:51,183 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:42:51,235 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-27 00:42:51,239 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-27 00:42:51,242 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-27 00:42:51,246 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-27 00:42:51,251 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-27 00:42:51,255 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-27 00:42:51,258 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-27 00:42:51,262 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-27 00:42:51,265 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-27 00:42:51,268 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-27 00:42:51,271 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-27 00:42:51,274 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-27 00:42:51,278 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-27 00:42:51,281 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-27 00:42:51,284 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-27 00:42:51,288 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-27 00:42:51,291 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-27 00:42:51,293 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-27 00:42:51,296 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-27 00:42:51,299 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-27 00:42:51,302 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-27 00:42:51,306 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-27 00:42:51,307 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-27 00:42:51,307 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-27 00:42:51,307 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-27 00:42:51,307 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-27 00:42:51,307 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-27 00:42:51,307 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:42:51,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-27 00:42:51,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2024-12-27 00:42:51,966 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:42:51,966 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-27 00:42:51,966 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:42:51,967 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:42:51,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:42:51,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:42:51,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:42:51,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:42:51,982 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:42:51,988 [ scc.git] DEBUG Already up to date. 2024-12-27 00:42:51,988 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2024-12-27 00:42:52,351 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-27 00:42:52,351 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2024-12-27 00:42:52,358 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:42:52,358 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:42:52,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:42:52,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-27 00:42:52,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:42:52,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-27 00:42:52,387 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:42:52,389 [ scc.git] DEBUG scripts | 2 +- 2024-12-27 00:42:52,389 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-27 00:42:52,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:42:52,524 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:42:52,617 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-27 00:42:52,617 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:42:52,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:42:52,623 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:42:53,626 [ scc.git] DEBUG has no local changes 2024-12-27 00:42:53,627 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:42:53,705 [ scc.git] DEBUG [detached HEAD fe9007a] merge master -Dorg -Snone 2024-12-27 00:42:53,705 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-27 00:42:53,706 [ scc.merge] INFO Already up to date. 2024-12-27 00:42:53,706 [ scc.merge] INFO 2024-12-27 00:42:53,706 [ scc.merge] INFO Merged PRs: 2024-12-27 00:42:53,706 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-27 00:42:53,706 [ scc.merge] INFO 2024-12-27 00:42:53,706 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-27 00:42:53,706 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-27 00:43:01,681 [ scc.config] DEBUG Found github.token 2024-12-27 00:43:01,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-27 00:43:01,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:43:02,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:43:02,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-27 00:43:02,658 [ scc.gh] DEBUG 4100 remaining from 5000 (Reset at 01:12 2024-12-27 00:43:02,659 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:02,665 [ scc.git] DEBUG Check current status 2024-12-27 00:43:02,665 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:02,670 [ scc.git] DEBUG fe9007a merge master -Dorg -Snone 2024-12-27 00:43:02,670 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:02,724 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-27 00:43:02,727 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-27 00:43:02,731 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-27 00:43:02,734 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-27 00:43:02,738 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-27 00:43:02,741 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-27 00:43:02,745 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-27 00:43:02,748 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-27 00:43:02,752 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-27 00:43:02,755 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-27 00:43:02,759 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-27 00:43:02,763 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-27 00:43:02,767 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-27 00:43:02,771 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-27 00:43:02,774 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-27 00:43:02,777 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-27 00:43:02,780 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-27 00:43:02,783 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-27 00:43:02,785 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-27 00:43:02,788 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-27 00:43:02,791 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-27 00:43:02,795 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-27 00:43:02,800 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:02,800 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-27 00:43:02,802 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-27 00:43:03,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-27 00:43:03,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:04,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:04,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:04,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:04,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:04,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-27 00:43:04,931 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:04,936 [ scc.git] DEBUG Check current status 2024-12-27 00:43:04,936 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:04,941 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-27 00:43:04,941 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:04,990 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:05,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-27 00:43:05,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:06,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:06,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:07,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:07,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:07,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:07,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-27 00:43:07,113 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:07,117 [ scc.git] DEBUG Check current status 2024-12-27 00:43:07,118 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:07,122 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-27 00:43:07,122 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:07,169 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:07,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-27 00:43:08,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:08,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:08,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:09,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:09,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:09,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:09,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-27 00:43:09,284 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:09,288 [ scc.git] DEBUG Check current status 2024-12-27 00:43:09,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:09,292 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-27 00:43:09,293 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:09,338 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:09,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-27 00:43:10,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:10,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:11,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:11,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:11,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:11,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:11,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-27 00:43:11,482 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:11,487 [ scc.git] DEBUG Check current status 2024-12-27 00:43:11,487 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:11,491 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-27 00:43:11,491 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:11,533 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:11,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-27 00:43:12,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:12,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:13,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:13,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:13,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:13,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:13,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-27 00:43:13,670 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:13,675 [ scc.git] DEBUG Check current status 2024-12-27 00:43:13,675 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:13,681 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2024-12-27 00:43:13,681 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:13,733 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:14,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-27 00:43:14,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:14,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:15,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:15,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:15,802 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:15,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:15,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-27 00:43:15,844 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:15,849 [ scc.git] DEBUG Check current status 2024-12-27 00:43:15,850 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:15,855 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-27 00:43:15,855 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:15,902 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:16,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-27 00:43:16,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:17,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:17,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:17,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:17,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:17,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:17,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-27 00:43:17,978 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:18,003 [ scc.git] DEBUG Check current status 2024-12-27 00:43:18,004 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:18,011 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-27 00:43:18,012 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:18,061 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:18,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-27 00:43:18,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:19,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:19,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:20,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:20,108 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:20,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:20,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-27 00:43:20,158 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:20,162 [ scc.git] DEBUG Check current status 2024-12-27 00:43:20,163 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:20,167 [ scc.git] DEBUG b4102d4 add dev 2024-12-27 00:43:20,167 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:20,212 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:20,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-27 00:43:21,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:21,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:21,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:22,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:22,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:22,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:22,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-27 00:43:22,277 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:22,282 [ scc.git] DEBUG Check current status 2024-12-27 00:43:22,282 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:22,287 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-27 00:43:22,287 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:22,331 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:22,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-27 00:43:23,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:23,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:24,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:24,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:24,414 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:24,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:24,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-27 00:43:24,458 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:24,463 [ scc.git] DEBUG Check current status 2024-12-27 00:43:24,464 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:24,468 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-27 00:43:24,468 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:24,510 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:24,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-27 00:43:25,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:25,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:26,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:26,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:26,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:26,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:26,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-27 00:43:26,602 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:26,607 [ scc.git] DEBUG Check current status 2024-12-27 00:43:26,608 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:26,612 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-27 00:43:26,612 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:26,658 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:27,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-27 00:43:27,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:27,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:28,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:28,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:28,736 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:28,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:28,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-27 00:43:28,779 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:28,784 [ scc.git] DEBUG Check current status 2024-12-27 00:43:28,784 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:28,789 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2024-12-27 00:43:28,789 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:28,838 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:29,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-27 00:43:29,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:30,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:30,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:30,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:30,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:30,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:30,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-27 00:43:30,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:30,942 [ scc.git] DEBUG Check current status 2024-12-27 00:43:30,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:30,947 [ scc.git] DEBUG bdfeb5e bump sphinx version 2024-12-27 00:43:30,948 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:30,997 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:31,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-27 00:43:31,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:32,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:32,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:33,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:33,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:33,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:33,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-27 00:43:33,085 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:33,090 [ scc.git] DEBUG Check current status 2024-12-27 00:43:33,090 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:33,094 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2024-12-27 00:43:33,095 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:33,139 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:33,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-27 00:43:33,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:34,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:34,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:35,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:35,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:35,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:35,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-27 00:43:35,258 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:35,264 [ scc.git] DEBUG Check current status 2024-12-27 00:43:35,264 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:35,269 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-27 00:43:35,269 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:35,310 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:35,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-27 00:43:35,622 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-27 00:43:35,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-27 00:43:36,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:36,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:37,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:37,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:37,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:37,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:37,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-27 00:43:37,570 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:37,576 [ scc.git] DEBUG Check current status 2024-12-27 00:43:37,576 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:37,582 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-27 00:43:37,582 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:37,631 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:38,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-27 00:43:38,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:38,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:39,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:39,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:39,626 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:39,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:39,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-27 00:43:39,670 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:39,674 [ scc.git] DEBUG Check current status 2024-12-27 00:43:39,675 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:39,679 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-27 00:43:39,679 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:39,726 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:40,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-27 00:43:40,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:40,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:41,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:41,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:41,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:41,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:41,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-27 00:43:41,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:41,822 [ scc.git] DEBUG Check current status 2024-12-27 00:43:41,822 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:41,827 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2024-12-27 00:43:41,827 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:41,870 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:41,871 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-27 00:43:42,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-27 00:43:42,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:43,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:43,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:43,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:43,972 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:44,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:44,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-27 00:43:44,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:44,020 [ scc.git] DEBUG Check current status 2024-12-27 00:43:44,020 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:44,025 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-27 00:43:44,025 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:44,068 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:44,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-27 00:43:44,376 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-27 00:43:44,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-27 00:43:45,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:45,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:45,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:46,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:46,325 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:46,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:46,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-27 00:43:46,369 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:46,375 [ scc.git] DEBUG Check current status 2024-12-27 00:43:46,375 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:46,380 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-27 00:43:46,380 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:46,427 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:46,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-27 00:43:46,728 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-27 00:43:46,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-27 00:43:47,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:47,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:48,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:48,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:48,636 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:48,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:48,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-27 00:43:48,680 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:48,685 [ scc.git] DEBUG Check current status 2024-12-27 00:43:48,685 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:48,690 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-27 00:43:48,691 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:48,739 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:49,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-27 00:43:49,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:49,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:50,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:50,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:50,778 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:50,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:50,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-27 00:43:50,819 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-27 00:43:50,824 [ scc.git] DEBUG Check current status 2024-12-27 00:43:50,825 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:50,830 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-27 00:43:50,830 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:50,872 [ scc.config] DEBUG Found remote.origin.url 2024-12-27 00:43:50,873 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-27 00:43:51,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-27 00:43:51,185 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-27 00:43:51,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-27 00:43:51,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-27 00:43:52,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-27 00:43:52,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-27 00:43:53,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-27 00:43:53,045 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:53,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:53,086 [ scc.git] DEBUG Resetting... 2024-12-27 00:43:53,086 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-27 00:43:53,097 [ scc.git] DEBUG HEAD is now at fe9007a merge master -Dorg -Snone 2024-12-27 00:43:53,098 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-27 00:43:53,205 [ scc.git] DEBUG Check current status 2024-12-27 00:43:53,206 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-27 00:43:53,213 [ scc.git] DEBUG fe9007a merge master -Dorg -Snone 2024-12-27 00:43:53,214 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-27 00:43:53,263 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-27 00:43:53,266 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-27 00:43:53,269 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-27 00:43:53,272 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-27 00:43:53,276 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-27 00:43:53,279 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-27 00:43:53,282 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-27 00:43:53,285 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-27 00:43:53,288 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-27 00:43:53,292 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-27 00:43:53,295 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-27 00:43:53,298 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-27 00:43:53,302 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-27 00:43:53,305 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-27 00:43:53,308 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-27 00:43:53,311 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-27 00:43:53,314 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-27 00:43:53,317 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-27 00:43:53,319 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-27 00:43:53,324 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-27 00:43:53,331 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-27 00:43:53,335 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-27 00:43:53,336 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-27 00:43:53,337 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-27 00:43:53,337 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-27 00:43:53,337 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-27 00:43:53,337 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-27 00:43:53,337 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-27 00:43:53,337 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:43:53,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-27 00:43:54,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2024-12-27 00:43:54,049 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:43:54,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2024-12-27 00:43:55,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:43:55,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2024-12-27 00:43:55,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:43:55,960 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-27 00:43:55,960 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:43:55,960 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:55,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:55,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:43:55,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:43:55,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:43:55,978 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:43:55,985 [ scc.git] DEBUG Already up to date. 2024-12-27 00:43:55,985 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2024-12-27 00:43:56,316 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-27 00:43:56,317 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2024-12-27 00:43:56,327 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:43:56,328 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:56,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:56,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-27 00:43:56,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:56,345 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-27 00:43:56,350 [ scc.git] DEBUG Already up to date. 2024-12-27 00:43:56,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:43:56,495 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:43:56,551 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:56,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:56,558 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:43:56,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-27 00:43:56,910 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:43:56,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-27 00:43:56,910 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:56,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:56,917 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:43:56,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:43:56,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:43:56,928 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:43:56,933 [ scc.git] DEBUG Already up to date. 2024-12-27 00:43:56,933 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:43:56,933 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:56,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:56,939 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:43:56,979 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:56,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:56,984 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:57,023 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:43:57,030 [ scc.git] DEBUG has no local changes 2024-12-27 00:43:57,030 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:43:57,039 [ scc.git] DEBUG [detached HEAD d7b16cf] merge master -Dorg -Ssuccess-only 2024-12-27 00:43:57,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:57,039 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:43:57,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-27 00:43:57,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-27 00:43:58,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-27 00:43:58,474 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:43:58,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-27 00:43:58,474 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:58,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:58,480 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:43:58,485 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:43:58,486 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:43:58,493 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:43:58,500 [ scc.git] DEBUG Already up to date. 2024-12-27 00:43:58,500 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:43:58,500 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:58,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:58,506 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:43:58,549 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:43:58,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:43:58,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:43:58,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:43:58,602 [ scc.git] DEBUG has no local changes 2024-12-27 00:43:58,602 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:43:58,611 [ scc.git] DEBUG [detached HEAD 51fea1c] merge master -Dorg -Ssuccess-only 2024-12-27 00:43:58,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:43:58,612 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:43:59,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-27 00:43:59,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-27 00:43:59,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-27 00:44:00,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-27 00:44:01,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:01,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:02,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-27 00:44:02,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:02,492 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-27 00:44:02,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-27 00:44:03,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-27 00:44:03,422 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:44:03,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-27 00:44:03,422 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:03,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:03,429 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:44:03,434 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:44:03,434 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:44:03,440 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:44:03,447 [ scc.git] DEBUG Already up to date. 2024-12-27 00:44:03,447 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-27 00:44:04,120 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-27 00:44:04,120 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-27 00:44:04,125 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:44:04,126 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:04,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:04,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-27 00:44:04,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:04,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-27 00:44:04,206 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:04,210 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-27 00:44:04,210 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-27 00:44:04,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:04,348 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:44:04,391 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:04,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:04,397 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:44:04,438 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:44:04,444 [ scc.git] DEBUG has no local changes 2024-12-27 00:44:04,445 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:44:04,453 [ scc.git] DEBUG [detached HEAD 63a4494] merge master -Dorg -Ssuccess-only 2024-12-27 00:44:04,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:44:04,454 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:44:04,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-27 00:44:05,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-27 00:44:05,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-27 00:44:06,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-27 00:44:06,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-27 00:44:07,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:07,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:08,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-27 00:44:08,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:09,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-27 00:44:09,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-27 00:44:09,529 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-27 00:44:09,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-27 00:44:10,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-27 00:44:11,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-27 00:44:11,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-27 00:44:12,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:12,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-27 00:44:13,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:13,016 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-27 00:44:13,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-27 00:44:14,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-27 00:44:14,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-27 00:44:15,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:15,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-27 00:44:15,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:15,944 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-27 00:44:15,944 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:44:15,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-27 00:44:15,945 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:15,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:15,950 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:44:15,955 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:44:15,955 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:44:15,961 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:44:15,967 [ scc.git] DEBUG Already up to date. 2024-12-27 00:44:15,967 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-27 00:44:16,297 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-27 00:44:16,297 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-27 00:44:16,302 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-27 00:44:16,846 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-27 00:44:16,847 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-27 00:44:16,852 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-27 00:44:17,435 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-27 00:44:17,435 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-27 00:44:17,440 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:44:17,440 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:17,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:17,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-27 00:44:17,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:17,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-27 00:44:17,682 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-27 00:44:17,682 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-27 00:44:17,683 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-27 00:44:17,683 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:44:17,683 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:44:17,689 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-27 00:44:17,695 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-27 00:44:17,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:17,933 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-27 00:44:17,941 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-27 00:44:17,946 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-27 00:44:17,951 [ scc.config] DEBUG Found github.token 2024-12-27 00:44:17,952 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-27 00:44:17,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-27 00:44:17,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:17,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-27 00:44:18,100 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-27 00:44:18,100 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-27 00:44:18,100 [ scc.git] DEBUG Auto-merging setup.py 2024-12-27 00:44:18,100 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-27 00:44:18,100 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-27 00:44:18,100 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-27 00:44:18,101 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-27 00:44:18,101 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:44:18,101 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:44:18,108 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-27 00:44:18,115 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-27 00:44:18,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:18,331 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-27 00:44:18,342 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-27 00:44:18,350 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-12-27 00:44:18,356 [ scc.config] DEBUG Found github.token 2024-12-27 00:44:18,356 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-27 00:44:18,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-27 00:44:18,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:18,368 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-27 00:44:18,382 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-27 00:44:18,382 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-27 00:44:18,383 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:18,386 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-27 00:44:18,386 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-27 00:44:18,386 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-27 00:44:18,386 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-27 00:44:18,386 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-27 00:44:18,386 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-27 00:44:18,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:18,728 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:44:18,769 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:18,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:18,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:44:18,814 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:44:18,820 [ scc.git] DEBUG has no local changes 2024-12-27 00:44:18,821 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:44:18,830 [ scc.git] DEBUG [detached HEAD 7d2e78d] merge master -Dorg -Ssuccess-only 2024-12-27 00:44:18,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:44:18,830 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:44:19,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-27 00:44:19,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-27 00:44:20,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-27 00:44:20,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-27 00:44:20,713 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:44:20,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-27 00:44:20,713 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:20,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:20,719 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:44:20,723 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:44:20,724 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:44:20,729 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:44:20,735 [ scc.git] DEBUG Already up to date. 2024-12-27 00:44:20,735 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:44:20,735 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:20,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:20,740 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:44:20,780 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:20,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:20,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:44:20,826 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:44:20,834 [ scc.git] DEBUG has no local changes 2024-12-27 00:44:20,834 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:44:20,843 [ scc.git] DEBUG [detached HEAD 5e270ad9] merge master -Dorg -Ssuccess-only 2024-12-27 00:44:20,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:44:20,844 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:44:21,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-27 00:44:21,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-27 00:44:22,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-27 00:44:22,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-27 00:44:23,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:23,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-27 00:44:24,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:24,091 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-27 00:44:24,091 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:44:24,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-27 00:44:24,091 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:24,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:24,098 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:44:24,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:44:24,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:44:24,108 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:44:24,115 [ scc.git] DEBUG Already up to date. 2024-12-27 00:44:24,115 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-27 00:44:24,512 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-27 00:44:24,512 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-27 00:44:24,516 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:44:24,516 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:24,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:24,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-27 00:44:24,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:24,547 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-27 00:44:24,664 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-27 00:44:24,665 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:24,668 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-27 00:44:24,668 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-27 00:44:24,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:24,813 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:44:24,853 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:24,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:24,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:44:24,899 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:44:24,906 [ scc.git] DEBUG has no local changes 2024-12-27 00:44:24,906 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:44:24,915 [ scc.git] DEBUG [detached HEAD 3663b14] merge master -Dorg -Ssuccess-only 2024-12-27 00:44:24,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:44:24,915 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:44:25,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-27 00:44:25,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-27 00:44:26,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-27 00:44:26,347 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:26,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-27 00:44:27,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:27,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:28,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-27 00:44:28,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:28,927 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-27 00:44:29,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-27 00:44:29,459 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:30,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-27 00:44:30,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:31,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:31,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-27 00:44:31,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:31,971 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-27 00:44:32,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-27 00:44:32,453 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:32,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-27 00:44:33,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:33,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:34,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-27 00:44:34,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:34,845 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-27 00:44:35,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-27 00:44:35,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-27 00:44:35,783 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:36,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-27 00:44:36,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:37,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:37,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-27 00:44:38,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:38,420 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-27 00:44:38,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-27 00:44:38,870 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:39,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-27 00:44:39,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:40,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:40,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-27 00:44:41,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:41,389 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-27 00:44:41,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-27 00:44:41,856 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:42,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-27 00:44:42,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:43,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:43,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-27 00:44:44,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:44,358 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-27 00:44:44,358 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:44:44,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-27 00:44:44,358 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:44,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:44,364 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:44:44,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:44:44,370 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:44:44,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:44:44,381 [ scc.git] DEBUG Already up to date. 2024-12-27 00:44:44,381 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-27 00:44:44,703 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-27 00:44:44,704 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-27 00:44:44,708 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-27 00:44:45,015 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-27 00:44:45,015 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-27 00:44:45,020 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-27 00:44:45,348 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-27 00:44:45,348 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-27 00:44:45,352 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-27 00:44:45,650 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-27 00:44:45,650 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-27 00:44:45,654 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-27 00:44:46,719 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-27 00:44:46,720 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-27 00:44:46,725 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-27 00:44:47,036 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-27 00:44:47,036 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-27 00:44:47,041 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:44:47,042 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:47,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:47,047 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-27 00:44:47,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:47,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-27 00:44:47,091 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:47,096 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-27 00:44:47,096 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-27 00:44:47,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:47,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-27 00:44:47,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:47,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-27 00:44:47,320 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-27 00:44:47,320 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:47,326 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-27 00:44:47,326 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-27 00:44:47,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:47,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-27 00:44:47,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:47,709 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-27 00:44:47,812 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-27 00:44:47,812 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-27 00:44:47,812 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:44:47,813 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:44:47,820 [ scc.git] DEBUG Calling 'git reset --hard dac42cbb3fc5339cc70c8e34fbb869573ec67541' 2024-12-27 00:44:47,828 [ scc.git] DEBUG HEAD is now at dac42cb merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-27 00:44:48,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:48,065 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-27 00:44:48,071 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-27 00:44:48,077 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-27 00:44:48,083 [ scc.config] DEBUG Found github.token 2024-12-27 00:44:48,083 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-27 00:44:48,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-27 00:44:48,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:48,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-27 00:44:48,279 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-27 00:44:48,280 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:48,284 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-27 00:44:48,284 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-27 00:44:48,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:48,453 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-27 00:44:48,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:48,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-27 00:44:48,499 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-27 00:44:48,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:44:48,504 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-27 00:44:48,504 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-27 00:44:48,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:48,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-27 00:44:48,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:48,868 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-27 00:44:49,033 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-27 00:44:49,033 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-27 00:44:49,033 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:44:49,033 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:44:49,041 [ scc.git] DEBUG Calling 'git reset --hard 15242c1abe1153bedc93c7857c854689bdf24cb9' 2024-12-27 00:44:49,049 [ scc.git] DEBUG HEAD is now at 15242c1 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-27 00:44:49,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:44:49,239 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-27 00:44:49,245 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-27 00:44:49,251 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-27 00:44:49,256 [ scc.config] DEBUG Found github.token 2024-12-27 00:44:49,256 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-27 00:44:50,013 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-27 00:44:50,014 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:44:50,059 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:44:50,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:44:50,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:44:50,105 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:44:50,114 [ scc.git] DEBUG has no local changes 2024-12-27 00:44:50,114 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:44:50,125 [ scc.git] DEBUG [detached HEAD f8c688b] merge master -Dorg -Ssuccess-only 2024-12-27 00:44:50,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:44:50,126 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:44:50,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-27 00:44:51,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-27 00:44:51,009 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-27 00:44:51,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-27 00:44:52,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:52,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:53,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-27 00:44:53,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:53,613 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-27 00:44:54,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-27 00:44:54,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-27 00:44:54,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-27 00:44:55,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-27 00:44:55,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-27 00:44:56,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:44:56,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:44:57,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-27 00:44:57,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:44:57,848 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-27 00:44:58,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-27 00:44:58,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-27 00:44:59,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-27 00:44:59,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:00,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:45:00,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-27 00:45:01,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:01,143 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-27 00:45:01,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-27 00:45:02,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-27 00:45:02,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-27 00:45:02,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:03,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-27 00:45:03,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:03,907 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-27 00:45:03,908 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:03,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-27 00:45:03,908 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:03,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:03,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:03,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:03,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:03,925 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:03,932 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:03,933 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-27 00:45:04,364 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-27 00:45:04,365 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-27 00:45:04,369 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-27 00:45:05,833 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-27 00:45:05,833 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-27 00:45:05,838 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-27 00:45:06,242 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-27 00:45:06,242 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-27 00:45:06,247 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-27 00:45:06,537 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-27 00:45:06,537 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-27 00:45:06,542 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:06,542 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:06,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:06,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-27 00:45:06,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:06,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-27 00:45:06,624 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-27 00:45:06,624 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:06,628 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-27 00:45:06,628 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-27 00:45:06,628 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-27 00:45:06,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:06,772 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-27 00:45:06,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:06,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-27 00:45:06,877 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-27 00:45:06,877 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-27 00:45:06,877 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-27 00:45:06,877 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-27 00:45:06,878 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:06,883 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-27 00:45:06,883 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-27 00:45:06,883 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-27 00:45:06,883 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-27 00:45:06,883 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-27 00:45:06,883 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-27 00:45:06,883 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-27 00:45:06,883 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-27 00:45:07,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:07,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-27 00:45:07,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:07,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-27 00:45:07,208 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-27 00:45:07,209 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:07,212 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-27 00:45:07,212 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-27 00:45:07,212 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-27 00:45:07,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:07,553 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-27 00:45:07,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:07,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-27 00:45:07,714 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:07,724 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-27 00:45:07,724 [ scc.git] DEBUG package.json | 2 +- 2024-12-27 00:45:07,724 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-27 00:45:07,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:07,947 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:07,993 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:07,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:08,000 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:08,044 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:08,055 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:08,055 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:08,065 [ scc.git] DEBUG [detached HEAD 65afe48] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:08,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:08,066 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:08,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-27 00:45:08,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-27 00:45:09,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-27 00:45:10,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-27 00:45:10,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:10,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-27 00:45:11,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:11,346 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-27 00:45:11,346 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:11,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-27 00:45:11,347 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:11,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:11,353 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:11,359 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:11,359 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:11,367 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:11,386 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:11,386 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-27 00:45:11,721 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-27 00:45:11,721 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-27 00:45:11,726 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:11,727 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:11,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:11,733 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-27 00:45:11,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:11,753 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-27 00:45:11,771 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:11,776 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-27 00:45:11,776 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-27 00:45:11,776 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-27 00:45:11,776 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-27 00:45:11,776 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-27 00:45:11,776 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-27 00:45:11,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:11,938 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:11,981 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:11,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:11,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:12,029 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:12,036 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:12,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:12,045 [ scc.git] DEBUG [detached HEAD b6bab28] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:12,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:12,045 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:12,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-27 00:45:12,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-27 00:45:13,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-27 00:45:14,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-27 00:45:14,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:14,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-27 00:45:15,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:15,382 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-27 00:45:15,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-27 00:45:16,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-27 00:45:16,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-27 00:45:17,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:17,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-27 00:45:18,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:18,248 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-27 00:45:18,248 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:18,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-27 00:45:18,248 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:18,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:18,254 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:18,258 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:18,258 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:18,263 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:18,268 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:18,269 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-27 00:45:18,918 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-27 00:45:18,918 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-27 00:45:18,922 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-27 00:45:19,600 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-27 00:45:19,600 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-27 00:45:19,605 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:19,605 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:19,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:19,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-27 00:45:19,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:19,622 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-27 00:45:19,840 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-27 00:45:19,840 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-27 00:45:19,840 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-27 00:45:19,840 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-27 00:45:19,840 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:45:19,840 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:45:19,846 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-27 00:45:19,853 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-27 00:45:19,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:19,988 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-27 00:45:19,996 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-27 00:45:20,086 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-12-27 00:45:20,091 [ scc.config] DEBUG Found github.token 2024-12-27 00:45:20,092 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-27 00:45:20,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-27 00:45:20,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:20,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-27 00:45:20,272 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-27 00:45:20,272 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-27 00:45:20,272 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-27 00:45:20,273 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:45:20,273 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:45:20,281 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-27 00:45:20,289 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-27 00:45:20,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:20,423 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-27 00:45:20,431 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-27 00:45:20,436 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-27 00:45:20,441 [ scc.config] DEBUG Found github.token 2024-12-27 00:45:20,441 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-27 00:45:20,441 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:20,481 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:20,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:20,487 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:20,526 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:20,534 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:20,534 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:20,543 [ scc.git] DEBUG [detached HEAD e5c199d] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:20,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:20,544 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:20,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-27 00:45:21,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-27 00:45:21,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-27 00:45:22,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-27 00:45:22,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-27 00:45:23,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-27 00:45:23,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-27 00:45:24,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-27 00:45:24,277 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:24,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-27 00:45:24,277 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:24,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:24,283 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:24,289 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:24,289 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:24,296 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:24,302 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:24,302 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:24,302 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:24,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:24,308 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:24,350 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:24,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:24,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:24,397 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:24,404 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:24,404 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:24,412 [ scc.git] DEBUG [detached HEAD 6c537f9] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:24,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:24,413 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:24,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2024-12-27 00:45:24,675 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:24,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-27 00:45:24,675 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:24,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:24,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:24,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:24,686 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:24,692 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:24,698 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:24,698 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:24,698 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:24,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:24,704 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:24,744 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:24,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:24,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:24,790 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:24,797 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:24,797 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:24,805 [ scc.git] DEBUG [detached HEAD 374c096] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:24,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:24,806 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:25,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-27 00:45:25,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-27 00:45:26,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-27 00:45:26,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-27 00:45:27,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:27,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-27 00:45:28,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:28,050 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-27 00:45:28,050 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:28,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-27 00:45:28,051 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:28,051 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:28,056 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:28,061 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:28,061 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:28,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:28,072 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:28,072 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-27 00:45:28,614 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-27 00:45:28,614 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-27 00:45:28,619 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:28,619 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:28,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:28,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-27 00:45:28,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:28,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-27 00:45:28,648 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-27 00:45:28,648 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:28,651 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-27 00:45:28,651 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-27 00:45:28,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:28,806 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:28,850 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:28,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:28,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:28,895 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:28,903 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:28,903 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:28,913 [ scc.git] DEBUG [detached HEAD 94184fb] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:28,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:28,914 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:29,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-27 00:45:29,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-27 00:45:30,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-27 00:45:30,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-27 00:45:31,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:31,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-27 00:45:32,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:32,311 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-27 00:45:32,311 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:32,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-27 00:45:32,311 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:32,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:32,317 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:32,323 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:32,323 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:32,329 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:32,335 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:32,335 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-27 00:45:32,778 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-27 00:45:32,778 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-27 00:45:32,783 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:32,783 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:32,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:32,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-27 00:45:32,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:32,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-27 00:45:32,963 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-27 00:45:32,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-27 00:45:32,963 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-27 00:45:32,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-27 00:45:32,964 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-27 00:45:32,964 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:45:32,964 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-27 00:45:32,964 [ scc.git] DEBUG Auto-merging setup.py 2024-12-27 00:45:32,964 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-27 00:45:32,964 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:45:32,970 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-27 00:45:32,977 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2024-12-27 00:45:33,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:33,129 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-27 00:45:33,136 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-27 00:45:33,233 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2024-12-27 00:45:33,238 [ scc.config] DEBUG Found github.token 2024-12-27 00:45:33,239 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-27 00:45:33,239 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:33,279 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:33,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:33,285 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:33,326 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:33,333 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:33,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:33,341 [ scc.git] DEBUG [detached HEAD 2b77e19] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:33,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:33,342 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:33,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-27 00:45:34,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2024-12-27 00:45:34,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2024-12-27 00:45:35,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2024-12-27 00:45:35,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:36,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:45:36,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2024-12-27 00:45:37,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2024-12-27 00:45:37,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-27 00:45:38,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-27 00:45:38,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-27 00:45:39,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:39,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-27 00:45:40,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:40,009 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-27 00:45:40,009 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:40,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-27 00:45:40,010 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:40,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:40,016 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:40,021 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:40,021 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:40,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:40,033 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:40,033 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-27 00:45:40,509 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-27 00:45:40,509 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-27 00:45:40,515 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:40,515 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:40,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:40,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-27 00:45:40,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:40,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-27 00:45:40,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-27 00:45:40,608 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-27 00:45:40,609 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-27 00:45:40,609 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-27 00:45:40,609 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-27 00:45:40,609 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-27 00:45:40,609 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-27 00:45:40,609 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-27 00:45:40,611 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-27 00:45:40,612 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-27 00:45:40,612 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-27 00:45:40,612 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-27 00:45:40,612 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-27 00:45:40,612 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-27 00:45:40,612 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-27 00:45:40,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:40,742 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:40,783 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:40,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:40,789 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:40,829 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:40,836 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:40,836 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:40,846 [ scc.git] DEBUG [detached HEAD 66ec9b5] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:40,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:40,846 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:41,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-27 00:45:41,170 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:41,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-27 00:45:41,170 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:41,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:41,176 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:41,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:41,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:41,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:41,192 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:41,192 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:41,192 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:41,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:41,197 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:41,238 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:41,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:41,243 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:41,284 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:41,290 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:41,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:41,298 [ scc.git] DEBUG [detached HEAD 92f6c8c] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:41,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:41,299 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:41,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-27 00:45:42,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-27 00:45:42,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2024-12-27 00:45:43,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-27 00:45:43,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:44,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:45:44,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-27 00:45:44,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:44,980 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-27 00:45:44,980 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:44,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-27 00:45:44,980 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:44,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:44,986 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:44,991 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:44,991 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:44,996 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:45,001 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:45,001 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-27 00:45:45,414 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-27 00:45:45,414 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-27 00:45:45,419 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:45,419 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:45,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:45,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-27 00:45:45,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:45,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-27 00:45:45,464 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:45:45,467 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-27 00:45:45,467 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-27 00:45:45,467 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-27 00:45:45,467 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-27 00:45:45,467 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-27 00:45:45,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:45,612 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:45,652 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:45,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:45,658 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:45,697 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:45,703 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:45,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:45,713 [ scc.git] DEBUG [detached HEAD fee44b2] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:45,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:45,713 [ scc.git] INFO Overriding base-branch from master to main 2024-12-27 00:45:45,713 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:46,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-27 00:45:46,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-27 00:45:47,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-27 00:45:47,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-27 00:45:48,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:48,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:45:49,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-27 00:45:49,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-27 00:45:50,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-27 00:45:50,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-27 00:45:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:51,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-27 00:45:52,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:52,092 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-27 00:45:52,093 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:52,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-27 00:45:52,094 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:52,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:52,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-27 00:45:52,120 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:52,121 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-27 00:45:52,140 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-27 00:45:52,161 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:52,162 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-27 00:45:52,517 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-27 00:45:52,517 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-27 00:45:52,522 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:52,522 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:52,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:52,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-27 00:45:52,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:52,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-27 00:45:52,647 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-27 00:45:52,647 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-27 00:45:52,647 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:45:52,648 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:45:52,654 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-27 00:45:52,660 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2024-12-27 00:45:52,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:52,803 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-27 00:45:52,809 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-27 00:45:52,815 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-27 00:45:52,819 [ scc.config] DEBUG Found github.token 2024-12-27 00:45:52,819 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-27 00:45:52,819 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:52,858 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:52,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:52,864 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:52,902 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:52,909 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:52,909 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:52,917 [ scc.git] DEBUG [detached HEAD 25bd12a] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:52,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:52,918 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:53,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-27 00:45:53,224 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:53,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-27 00:45:53,224 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:53,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:53,230 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:53,235 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:53,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:53,242 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:53,248 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:53,248 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:53,248 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:53,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:53,263 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:53,306 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:53,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:53,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:53,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:53,358 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:53,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:53,367 [ scc.git] DEBUG [detached HEAD 3590f91] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:53,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:53,368 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:53,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-27 00:45:53,682 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:53,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-27 00:45:53,682 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:53,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:53,689 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:53,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:53,694 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:53,700 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:53,706 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:53,706 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:53,706 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:53,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:53,711 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:53,750 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:53,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:53,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:53,794 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:53,801 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:53,801 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:53,810 [ scc.git] DEBUG [detached HEAD 8dcd7d7] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:53,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:53,810 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:54,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-27 00:45:54,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-27 00:45:55,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-27 00:45:55,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-27 00:45:56,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:45:56,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-27 00:45:56,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:45:56,840 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-27 00:45:56,840 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:45:56,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-27 00:45:56,841 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:56,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:56,846 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-27 00:45:56,851 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:45:56,851 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-27 00:45:56,856 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-27 00:45:56,861 [ scc.git] DEBUG Already up to date. 2024-12-27 00:45:56,862 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-27 00:45:57,234 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-27 00:45:57,235 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-27 00:45:57,239 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:45:57,240 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:57,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:57,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-27 00:45:57,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:57,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-27 00:45:57,461 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-27 00:45:57,461 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-27 00:45:57,461 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:45:57,461 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:45:57,468 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-27 00:45:57,475 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-27 00:45:57,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:45:57,607 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-27 00:45:57,613 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-27 00:45:57,619 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-27 00:45:57,624 [ scc.config] DEBUG Found github.token 2024-12-27 00:45:57,624 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-27 00:45:57,624 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:45:57,663 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:45:57,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:45:57,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:45:57,706 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:45:57,713 [ scc.git] DEBUG has no local changes 2024-12-27 00:45:57,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:45:57,722 [ scc.git] DEBUG [detached HEAD 494e9bb] merge master -Dorg -Ssuccess-only 2024-12-27 00:45:57,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:45:57,723 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-27 00:45:57,723 [ scc.repo] DEBUG ## PRs found: 2024-12-27 00:45:58,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-27 00:45:58,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-27 00:45:59,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-27 00:45:59,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-27 00:45:59,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:46:00,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-27 00:46:00,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-27 00:46:01,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:46:01,209 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-27 00:46:01,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-27 00:46:02,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-27 00:46:02,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-27 00:46:03,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-27 00:46:03,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-27 00:46:03,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-27 00:46:03,924 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-27 00:46:04,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-27 00:46:04,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-27 00:46:05,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-27 00:46:05,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-27 00:46:05,888 [ scc.repo] DEBUG ## Branches found: 2024-12-27 00:46:05,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-27 00:46:05,888 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:46:05,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:46:05,894 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-27 00:46:05,900 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-27 00:46:05,900 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-27 00:46:05,907 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-27 00:46:05,914 [ scc.git] DEBUG Already up to date. 2024-12-27 00:46:05,914 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-27 00:46:06,232 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-27 00:46:06,232 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-27 00:46:06,237 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-27 00:46:06,578 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-27 00:46:06,578 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-27 00:46:06,582 [ scc.git] DEBUG ## Unique users: [] 2024-12-27 00:46:06,582 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:46:06,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:46:06,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-27 00:46:06,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:46:06,601 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-27 00:46:06,757 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2024-12-27 00:46:06,757 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-27 00:46:06,758 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-27 00:46:06,764 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-27 00:46:06,769 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-27 00:46:06,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:06,906 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-27 00:46:06,915 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-27 00:46:06,922 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#288](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-27 00:46:06,927 [ scc.config] DEBUG Found github.token 2024-12-27 00:46:06,928 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-27 00:46:06,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-27 00:46:06,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:46:06,941 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-27 00:46:06,952 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-27 00:46:06,955 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-27 00:46:06,955 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-27 00:46:07,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:07,299 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-27 00:46:07,343 [ scc.git] DEBUG Get sha1 of %s 2024-12-27 00:46:07,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-27 00:46:07,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:46:07,391 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:46:07,400 [ scc.git] DEBUG has no local changes 2024-12-27 00:46:07,400 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:46:07,411 [ scc.git] DEBUG [detached HEAD a3fc4c9] merge master -Dorg -Ssuccess-only 2024-12-27 00:46:07,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:07,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-27 00:46:07,491 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-27 00:46:07,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:07,696 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-27 00:46:07,702 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-27 00:46:08,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:08,091 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-27 00:46:08,096 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-27 00:46:08,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:08,478 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-27 00:46:08,483 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-27 00:46:08,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:08,867 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-27 00:46:09,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:09,270 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-27 00:46:09,275 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-27 00:46:09,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:09,651 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-27 00:46:09,657 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-27 00:46:10,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:10,041 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-27 00:46:10,048 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-27 00:46:10,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:10,459 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-27 00:46:10,466 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-27 00:46:10,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:10,846 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-27 00:46:10,852 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-27 00:46:11,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:11,242 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-27 00:46:11,247 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-27 00:46:11,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:11,626 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-27 00:46:11,630 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-27 00:46:12,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:12,019 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-27 00:46:12,025 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-27 00:46:12,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:12,415 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-27 00:46:12,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:12,818 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-27 00:46:13,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:13,218 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-27 00:46:13,223 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-27 00:46:13,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:13,604 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-27 00:46:13,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:13,994 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-27 00:46:14,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:14,371 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-27 00:46:14,377 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-27 00:46:14,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:14,790 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-27 00:46:14,796 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-27 00:46:15,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:15,184 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-27 00:46:15,193 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-27 00:46:15,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:15,579 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-27 00:46:15,585 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-27 00:46:15,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-27 00:46:15,961 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-27 00:46:15,961 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-27 00:46:16,040 [ scc.git] DEBUG has local changes 2024-12-27 00:46:16,040 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#288 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/288/)' 2024-12-27 00:46:16,055 [ scc.git] DEBUG [detached HEAD b603dd3] merge master -Dorg -Ssuccess-only 2024-12-27 00:46:16,055 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-27 00:46:16,055 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-27 00:46:16,055 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,055 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-27 00:46:16,056 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-27 00:46:16,056 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-27 00:46:16,056 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-27 00:46:16,056 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-27 00:46:16,056 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-27 00:46:16,056 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-27 00:46:16,056 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-27 00:46:16,056 [ scc.merge] INFO 2024-12-27 00:46:16,056 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-27 00:46:16,056 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-27 00:46:16,056 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-27 00:46:16,057 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-27 00:46:16,057 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-27 00:46:16,057 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-27 00:46:16,057 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-27 00:46:16,057 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,057 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-27 00:46:16,057 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-27 00:46:16,057 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-27 00:46:16,058 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-27 00:46:16,058 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-27 00:46:16,058 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-27 00:46:16,058 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-27 00:46:16,058 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-27 00:46:16,058 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-27 00:46:16,058 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-27 00:46:16,058 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,058 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,058 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-27 00:46:16,058 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-27 00:46:16,059 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-27 00:46:16,059 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,059 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO 2024-12-27 00:46:16,059 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-27 00:46:16,059 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,060 [ scc.merge] INFO 2024-12-27 00:46:16,060 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,060 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-27 00:46:16,060 [ scc.merge] INFO 2024-12-27 00:46:16,060 [ scc.merge] INFO Repository: ome/scripts 2024-12-27 00:46:16,060 [ scc.merge] INFO Excluded PRs: 2024-12-27 00:46:16,060 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-27 00:46:16,060 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-27 00:46:16,060 [ scc.merge] INFO Already up to date. 2024-12-27 00:46:16,060 [ scc.merge] INFO 2024-12-27 00:46:16,060 [ scc.merge] INFO Merged PRs: 2024-12-27 00:46:16,060 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-27 00:46:16,060 [ scc.merge] INFO 2024-12-27 00:46:16,060 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-27 00:46:16,060 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-27 00:46:16,060 [ scc.merge] INFO 2024-12-27 00:46:16,060 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-27 00:46:16,060 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-27 00:46:16,066 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-27 00:46:16,072 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-27 00:46:16,077 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-27 00:46:16,082 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-27 00:46:16,087 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-27 00:46:16,092 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-27 00:46:16,097 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-27 00:46:16,102 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-27 00:46:16,107 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-27 00:46:16,112 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-27 00:46:16,117 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-27 00:46:16,122 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-27 00:46:16,127 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-27 00:46:16,132 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-27 00:46:16,137 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-27 00:46:16,142 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-27 00:46:16,147 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-27 00:46:16,153 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-27 00:46:16,158 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-27 00:46:16,163 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-27 00:46:16,168 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-27 00:46:16,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-27 00:46:16,173 [ scc.git] DEBUG Calling 'git remote' 2024-12-27 00:46:16,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 0743652] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD d6ad2fb] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-27 00:47:02,434 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-27 00:47:11,288 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-27 00:47:13,663 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-27 00:47:18,341 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-27 00:47:57,426 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS