Started by upstream project "Trigger" build number 567
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 501
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.1.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.1.1
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-45.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.7.14-py3-none-any.whl.metadata (2.4 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-45.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
Using cached requests-2.32.4-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.7.14-py3-none-any.whl (162 kB)
Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.7.14 cffi-1.17.1 charset_normalizer-3.4.2 cryptography-45.0.5 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-07-27 00:36:00,993 [ scc.config] DEBUG Found github.token
2025-07-27 00:36:00,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:01,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:01,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:01,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:01,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:02,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-27 00:36:02,008 [ scc.gh] DEBUG 4640 remaining from 5000 (Reset at 01:07
2025-07-27 00:36:02,009 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:02,011 [ scc.git] DEBUG Check current status
2025-07-27 00:36:02,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:02,014 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-07-27 00:36:02,014 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:02,065 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-07-27 00:36:02,069 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-07-27 00:36:02,073 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-07-27 00:36:02,077 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-07-27 00:36:02,082 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-07-27 00:36:02,085 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-07-27 00:36:02,088 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-07-27 00:36:02,092 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-07-27 00:36:02,096 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-07-27 00:36:02,099 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-07-27 00:36:02,103 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-07-27 00:36:02,106 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-07-27 00:36:02,110 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-07-27 00:36:02,113 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-07-27 00:36:02,117 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-07-27 00:36:02,120 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-07-27 00:36:02,123 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-07-27 00:36:02,126 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-07-27 00:36:02,129 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-07-27 00:36:02,133 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-07-27 00:36:02,136 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-07-27 00:36:02,140 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-07-27 00:36:02,143 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:02,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:02,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-07-27 00:36:02,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:03,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:03,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:03,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:03,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:03,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:04,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:04,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:04,338 [ scc.git] DEBUG Resetting...
2025-07-27 00:36:04,338 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-27 00:36:04,346 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-07-27 00:36:04,347 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-27 00:36:04,456 [ scc.git] DEBUG Check current status
2025-07-27 00:36:04,456 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:04,459 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-07-27 00:36:04,459 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:04,507 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-07-27 00:36:04,511 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-07-27 00:36:04,514 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-07-27 00:36:04,519 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-07-27 00:36:04,523 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-07-27 00:36:04,527 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-07-27 00:36:04,530 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-07-27 00:36:04,534 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-07-27 00:36:04,537 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-07-27 00:36:04,541 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-07-27 00:36:04,544 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-07-27 00:36:04,547 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-07-27 00:36:04,551 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-07-27 00:36:04,554 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-07-27 00:36:04,558 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-07-27 00:36:04,561 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-07-27 00:36:04,564 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-07-27 00:36:04,567 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-07-27 00:36:04,570 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-07-27 00:36:04,573 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-07-27 00:36:04,576 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-07-27 00:36:04,580 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-07-27 00:36:04,581 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-07-27 00:36:04,581 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-07-27 00:36:04,581 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-07-27 00:36:04,581 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-07-27 00:36:04,581 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-07-27 00:36:04,581 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:36:04,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:04,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-07-27 00:36:05,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:05,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-07-27 00:36:05,399 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:36:05,399 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-07-27 00:36:05,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:05,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-07-27 00:36:05,892 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:36:05,892 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-07-27 00:36:06,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:06,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-07-27 00:36:06,428 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:36:06,428 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-07-27 00:36:06,428 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:36:06,428 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:36:06,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:36:06,431 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:36:06,433 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:36:06,433 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:36:06,437 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:36:06,440 [ scc.git] DEBUG Already up to date.
2025-07-27 00:36:06,440 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-07-27 00:36:06,732 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-07-27 00:36:06,732 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-07-27 00:36:06,739 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-07-27 00:36:07,159 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-07-27 00:36:07,159 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-07-27 00:36:07,167 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-07-27 00:36:07,462 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-07-27 00:36:07,462 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-07-27 00:36:07,470 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:36:07,470 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:36:07,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:36:07,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-07-27 00:36:07,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:36:07,477 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-07-27 00:36:07,495 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:36:07,497 [ scc.git] DEBUG scripts | 2 +-
2025-07-27 00:36:07,497 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-27 00:36:07,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:07,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:07,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-07-27 00:36:07,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:36:07,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-07-27 00:36:07,924 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:36:07,927 [ scc.git] DEBUG omero-figure | 2 +-
2025-07-27 00:36:07,927 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-27 00:36:08,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:08,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:08,344 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-07-27 00:36:08,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:36:08,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-07-27 00:36:08,366 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:36:08,369 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-07-27 00:36:08,369 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-27 00:36:08,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:08,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:08,757 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:36:08,823 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-07-27 00:36:08,854 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-07-27 00:36:08,871 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-07-27 00:36:08,871 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:36:08,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:36:08,874 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:36:08,963 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f701a4f76d0> has no local changes
2025-07-27 00:36:08,963 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:36:09,044 [ scc.git] DEBUG [detached HEAD a6739ac] merge master -Dorg -Snone
2025-07-27 00:36:09,045 [ scc.merge] INFO Repository: ome/omero-plugins
2025-07-27 00:36:09,045 [ scc.merge] INFO Already up to date.
2025-07-27 00:36:09,045 [ scc.merge] INFO
2025-07-27 00:36:09,045 [ scc.merge] INFO Merged PRs:
2025-07-27 00:36:09,045 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-07-27 00:36:09,045 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-07-27 00:36:09,045 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-07-27 00:36:09,045 [ scc.merge] INFO
2025-07-27 00:36:09,045 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-27 00:36:09,045 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb'
Submodule path 'omero-figure': checked out '3e8fa73092b997ca81b2cb5a9ab19ce81f159d45'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-07-27 00:36:15,974 [ scc.config] DEBUG Found github.token
2025-07-27 00:36:15,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:16,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:16,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:16,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:36:16,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:16,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-07-27 00:36:16,985 [ scc.gh] DEBUG 4626 remaining from 5000 (Reset at 01:07
2025-07-27 00:36:16,985 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:16,988 [ scc.git] DEBUG Check current status
2025-07-27 00:36:16,988 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:16,990 [ scc.git] DEBUG a6739ac merge master -Dorg -Snone
2025-07-27 00:36:16,991 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:17,043 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-07-27 00:36:17,046 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-07-27 00:36:17,050 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-07-27 00:36:17,054 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c)
2025-07-27 00:36:17,059 [ scc.git] DEBUG +3e8fa73092b997ca81b2cb5a9ab19ce81f159d45 omero-figure (v7.2.1-11-g3e8fa730)
2025-07-27 00:36:17,063 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-07-27 00:36:17,066 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-07-27 00:36:17,071 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-07-27 00:36:17,074 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-07-27 00:36:17,078 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-07-27 00:36:17,081 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-07-27 00:36:17,085 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-07-27 00:36:17,088 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-07-27 00:36:17,092 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-07-27 00:36:17,096 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-07-27 00:36:17,099 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-07-27 00:36:17,102 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-07-27 00:36:17,105 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-07-27 00:36:17,108 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-07-27 00:36:17,111 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-07-27 00:36:17,114 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-07-27 00:36:17,118 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34)
2025-07-27 00:36:17,121 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:17,121 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-07-27 00:36:17,123 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-07-27 00:36:17,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:17,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-07-27 00:36:17,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:17,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:18,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:18,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:18,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:19,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:19,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:19,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:19,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-07-27 00:36:19,341 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:19,343 [ scc.git] DEBUG Check current status
2025-07-27 00:36:19,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:19,346 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-07-27 00:36:19,346 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:19,389 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:19,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:19,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-07-27 00:36:20,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:20,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:20,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:20,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:21,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:21,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:21,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:21,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:21,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:21,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-07-27 00:36:21,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:21,630 [ scc.git] DEBUG Check current status
2025-07-27 00:36:21,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:21,633 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-07-27 00:36:21,633 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:21,676 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:21,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:22,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-07-27 00:36:22,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:22,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:22,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:23,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:23,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:23,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:23,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:24,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:24,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:24,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:24,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-07-27 00:36:24,070 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:24,072 [ scc.git] DEBUG Check current status
2025-07-27 00:36:24,072 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:24,075 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-07-27 00:36:24,075 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:24,117 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:24,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:24,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-07-27 00:36:24,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:25,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:25,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:25,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:25,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:25,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:26,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:26,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:26,363 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:26,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:26,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-07-27 00:36:26,404 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:26,406 [ scc.git] DEBUG Check current status
2025-07-27 00:36:26,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:26,409 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0
2025-07-27 00:36:26,409 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:26,451 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:26,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:26,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-07-27 00:36:27,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:27,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:27,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:27,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:28,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:28,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:28,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:28,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:28,694 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:28,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:28,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-07-27 00:36:28,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:28,737 [ scc.git] DEBUG Check current status
2025-07-27 00:36:28,737 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:28,740 [ scc.git] DEBUG 3e8fa730 Merge pull request #633 from ome/dependabot/npm_and_yarn/dompurify-3.2.4
2025-07-27 00:36:28,740 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:28,781 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:28,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:29,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-07-27 00:36:29,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:29,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:30,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:30,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:30,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:30,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:30,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:31,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:31,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:31,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:31,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-07-27 00:36:31,159 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:31,161 [ scc.git] DEBUG Check current status
2025-07-27 00:36:31,161 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:31,163 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-07-27 00:36:31,163 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:31,204 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:31,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:31,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-07-27 00:36:31,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:32,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:32,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:32,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:32,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:33,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:33,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:33,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:33,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:33,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:33,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-07-27 00:36:33,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:33,493 [ scc.git] DEBUG Check current status
2025-07-27 00:36:33,493 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:33,496 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-07-27 00:36:33,496 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:33,537 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:33,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:33,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-07-27 00:36:34,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:34,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:34,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:34,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:35,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:35,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:35,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:35,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:35,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:35,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:35,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-07-27 00:36:35,833 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:35,836 [ scc.git] DEBUG Check current status
2025-07-27 00:36:35,836 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:35,838 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-07-27 00:36:35,838 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:35,880 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:36,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:36,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-07-27 00:36:36,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:36,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:37,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:37,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:37,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:37,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:37,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:38,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:38,173 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:38,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:38,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-07-27 00:36:38,214 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:38,216 [ scc.git] DEBUG Check current status
2025-07-27 00:36:38,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:38,219 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-07-27 00:36:38,219 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:38,260 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:38,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:38,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-07-27 00:36:38,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:39,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:39,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:39,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:39,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:40,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:40,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:40,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:40,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:40,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:40,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-07-27 00:36:40,580 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:40,582 [ scc.git] DEBUG Check current status
2025-07-27 00:36:40,582 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:40,584 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-07-27 00:36:40,585 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:40,626 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:40,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:41,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-07-27 00:36:41,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:41,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:41,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:42,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:42,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:42,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:42,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:42,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:42,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:42,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:42,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-07-27 00:36:42,950 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:42,953 [ scc.git] DEBUG Check current status
2025-07-27 00:36:42,953 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:42,955 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-07-27 00:36:42,955 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:42,997 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:43,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:43,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-07-27 00:36:43,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:43,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:44,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:44,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:44,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:44,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:45,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:45,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:45,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:45,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:45,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-07-27 00:36:45,281 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:45,283 [ scc.git] DEBUG Check current status
2025-07-27 00:36:45,283 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:45,286 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-07-27 00:36:45,286 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:45,329 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:45,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:45,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-07-27 00:36:46,034 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:46,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:46,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:46,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:46,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:47,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:47,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:47,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:47,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:47,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:47,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-07-27 00:36:47,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:47,630 [ scc.git] DEBUG Check current status
2025-07-27 00:36:47,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:47,632 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-07-27 00:36:47,633 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:47,673 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:47,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:48,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-07-27 00:36:48,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:48,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:48,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:49,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:49,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:49,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:49,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:49,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:49,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:49,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:49,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-07-27 00:36:49,973 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:49,976 [ scc.git] DEBUG Check current status
2025-07-27 00:36:49,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:49,978 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-07-27 00:36:49,978 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:50,020 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:50,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:50,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-07-27 00:36:50,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:50,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:51,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:51,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:51,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:51,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:52,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:52,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:52,270 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:52,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:52,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-07-27 00:36:52,311 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:52,314 [ scc.git] DEBUG Check current status
2025-07-27 00:36:52,314 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:52,316 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2025-07-27 00:36:52,317 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:52,357 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:52,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:52,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-07-27 00:36:52,713 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-07-27 00:36:52,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:52,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-07-27 00:36:53,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:53,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:53,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:53,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:54,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:54,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:54,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:54,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:54,824 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:54,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:54,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-07-27 00:36:54,865 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:54,867 [ scc.git] DEBUG Check current status
2025-07-27 00:36:54,867 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:54,869 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-07-27 00:36:54,870 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:54,911 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:55,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:55,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-07-27 00:36:55,627 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:55,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:56,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:56,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:56,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:56,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:56,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:57,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:57,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:57,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:57,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-07-27 00:36:57,220 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:57,222 [ scc.git] DEBUG Check current status
2025-07-27 00:36:57,222 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:57,224 [ scc.git] DEBUG 160d894 Fix display of code
2025-07-27 00:36:57,225 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:57,265 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:57,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:57,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-07-27 00:36:57,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:58,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:36:58,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:58,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:36:58,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:59,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:36:59,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:36:59,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:36:59,505 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:36:59,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:36:59,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-07-27 00:36:59,547 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:36:59,550 [ scc.git] DEBUG Check current status
2025-07-27 00:36:59,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:36:59,552 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build
2025-07-27 00:36:59,552 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:36:59,593 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:36:59,593 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-07-27 00:36:59,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:00,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-07-27 00:37:00,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:00,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:37:00,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:00,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:37:01,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:01,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:37:01,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:01,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:37:01,846 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:01,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:01,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-07-27 00:37:01,887 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:37:01,889 [ scc.git] DEBUG Check current status
2025-07-27 00:37:01,889 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:37:01,891 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-07-27 00:37:01,891 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:37:01,931 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:37:02,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:02,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-07-27 00:37:02,281 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-07-27 00:37:02,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:02,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-07-27 00:37:02,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:03,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:37:03,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:03,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:37:03,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:03,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:37:04,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:04,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:37:04,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:04,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:04,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-07-27 00:37:04,382 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:37:04,384 [ scc.git] DEBUG Check current status
2025-07-27 00:37:04,384 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:37:04,387 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-07-27 00:37:04,387 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:37:04,429 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:37:04,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:04,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-07-27 00:37:04,787 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-07-27 00:37:04,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:05,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-07-27 00:37:05,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:05,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:37:05,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:06,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:37:06,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:06,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:37:06,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:06,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:37:06,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:06,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:06,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-07-27 00:37:06,933 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:37:06,935 [ scc.git] DEBUG Check current status
2025-07-27 00:37:06,935 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:37:06,938 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-07-27 00:37:06,938 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:37:06,979 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:37:07,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:07,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-07-27 00:37:07,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:07,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:37:08,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:08,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:37:08,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:08,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:37:08,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:09,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:37:09,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:09,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:09,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-07-27 00:37:09,219 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-07-27 00:37:09,221 [ scc.git] DEBUG Check current status
2025-07-27 00:37:09,221 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:37:09,224 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-07-27 00:37:09,224 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:37:09,266 [ scc.config] DEBUG Found remote.origin.url
2025-07-27 00:37:09,266 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-07-27 00:37:09,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:09,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-07-27 00:37:09,630 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-07-27 00:37:09,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:09,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-07-27 00:37:10,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:10,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-07-27 00:37:10,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:10,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-07-27 00:37:11,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:11,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-07-27 00:37:11,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:11,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-07-27 00:37:11,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:11,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:11,765 [ scc.git] DEBUG Resetting...
2025-07-27 00:37:11,765 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-07-27 00:37:11,773 [ scc.git] DEBUG HEAD is now at a6739ac merge master -Dorg -Snone
2025-07-27 00:37:11,773 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-07-27 00:37:11,834 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-07-27 00:37:11,853 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-07-27 00:37:11,876 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-07-27 00:37:11,892 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-07-27 00:37:11,922 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-07-27 00:37:11,952 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-07-27 00:37:11,955 [ scc.git] DEBUG Check current status
2025-07-27 00:37:11,955 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-07-27 00:37:11,957 [ scc.git] DEBUG a6739ac merge master -Dorg -Snone
2025-07-27 00:37:11,958 [ scc.git] DEBUG Calling 'git submodule status'
2025-07-27 00:37:12,005 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-07-27 00:37:12,008 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-07-27 00:37:12,012 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-07-27 00:37:12,015 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-07-27 00:37:12,020 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-07-27 00:37:12,023 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-07-27 00:37:12,026 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-07-27 00:37:12,031 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-07-27 00:37:12,034 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-07-27 00:37:12,037 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-07-27 00:37:12,041 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-07-27 00:37:12,044 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-07-27 00:37:12,048 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-07-27 00:37:12,051 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-07-27 00:37:12,054 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-07-27 00:37:12,058 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-07-27 00:37:12,060 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-07-27 00:37:12,063 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-07-27 00:37:12,066 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-07-27 00:37:12,069 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-07-27 00:37:12,072 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-07-27 00:37:12,076 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-07-27 00:37:12,077 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-07-27 00:37:12,077 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-07-27 00:37:12,077 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-07-27 00:37:12,077 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-07-27 00:37:12,077 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-07-27 00:37:12,077 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-07-27 00:37:12,077 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:37:12,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:12,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-07-27 00:37:12,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:12,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-07-27 00:37:12,847 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:37:13,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:13,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-07-27 00:37:13,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:13,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:14,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:14,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-07-27 00:37:14,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:14,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:14,938 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-07-27 00:37:15,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:15,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-07-27 00:37:15,416 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:37:15,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-07-27 00:37:16,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:16,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:16,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:16,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-07-27 00:37:17,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:17,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:17,429 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-07-27 00:37:17,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:17,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-07-27 00:37:17,913 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:37:18,164 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:18,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-07-27 00:37:18,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:18,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:19,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:19,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-07-27 00:37:19,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:19,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:19,912 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-07-27 00:37:19,912 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:37:19,912 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:19,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:19,915 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:37:19,917 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:37:19,917 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:37:19,920 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:37:19,923 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:19,923 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-07-27 00:37:20,227 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-07-27 00:37:20,227 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-07-27 00:37:20,234 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-07-27 00:37:20,512 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-07-27 00:37:20,512 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-07-27 00:37:20,519 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-07-27 00:37:20,799 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-07-27 00:37:20,799 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-07-27 00:37:20,806 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:37:20,806 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:20,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:20,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-07-27 00:37:20,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:20,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-07-27 00:37:20,816 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:20,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:20,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:20,988 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-07-27 00:37:20,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:20,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-07-27 00:37:20,996 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:21,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:21,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:21,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-07-27 00:37:21,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:21,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-07-27 00:37:21,418 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:21,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:21,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:21,856 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:37:21,913 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:21,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:21,915 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:37:22,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:22,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-07-27 00:37:22,334 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:37:22,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-07-27 00:37:22,334 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:22,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:22,337 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:37:22,339 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:37:22,339 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:37:22,342 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:37:22,345 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:22,345 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:37:22,345 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:22,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:22,348 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:37:22,388 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:22,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:22,390 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:22,428 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:37:22,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9ea13cacd0> has no local changes
2025-07-27 00:37:22,432 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:37:22,438 [ scc.git] DEBUG [detached HEAD 1f222d1] merge master -Dorg -Ssuccess-only
2025-07-27 00:37:22,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:22,438 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:37:22,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:22,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-07-27 00:37:23,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:23,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-07-27 00:37:23,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:23,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-07-27 00:37:23,849 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:37:23,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-07-27 00:37:23,849 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:23,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:23,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:37:23,854 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:37:23,854 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:37:23,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:37:23,860 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:23,860 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:37:23,860 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:23,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:23,863 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:37:23,902 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:23,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:23,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:23,945 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:37:23,948 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e931650> has no local changes
2025-07-27 00:37:23,948 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:37:23,954 [ scc.git] DEBUG [detached HEAD 2f638a2] merge master -Dorg -Ssuccess-only
2025-07-27 00:37:23,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:23,955 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:37:24,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:24,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-07-27 00:37:24,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:24,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-07-27 00:37:25,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:25,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-07-27 00:37:25,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:25,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:26,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:26,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-07-27 00:37:26,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:26,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:26,906 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-07-27 00:37:27,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:27,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-07-27 00:37:27,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:27,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-07-27 00:37:28,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:28,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-07-27 00:37:28,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:28,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:29,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:29,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:37:29,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:29,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-07-27 00:37:30,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:30,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:30,422 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-07-27 00:37:30,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:30,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-07-27 00:37:31,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:31,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-07-27 00:37:31,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:31,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-07-27 00:37:32,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:32,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:32,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:32,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:37:33,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:33,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-07-27 00:37:33,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:33,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:33,859 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-07-27 00:37:34,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:34,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-07-27 00:37:34,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:34,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-07-27 00:37:34,820 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:37:34,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-07-27 00:37:34,820 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:34,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:34,823 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:37:34,825 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:37:34,825 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:37:34,828 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:37:34,831 [ scc.git] DEBUG Already up to date.
2025-07-27 00:37:34,831 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-07-27 00:37:35,110 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-07-27 00:37:35,110 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-07-27 00:37:35,114 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-07-27 00:37:35,394 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-07-27 00:37:35,394 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-07-27 00:37:35,398 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-07-27 00:37:35,670 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-07-27 00:37:35,670 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-07-27 00:37:35,674 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:37:35,674 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:35,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:35,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-07-27 00:37:35,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:35,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-07-27 00:37:35,692 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:37:35,695 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-07-27 00:37:35,695 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-07-27 00:37:35,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:35,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:35,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-07-27 00:37:35,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:35,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-07-27 00:37:35,882 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-07-27 00:37:35,883 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:37:35,886 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-07-27 00:37:35,886 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-07-27 00:37:36,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:36,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:36,325 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-07-27 00:37:36,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:36,331 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-07-27 00:37:36,341 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-07-27 00:37:36,342 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:37:36,345 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-07-27 00:37:36,345 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-07-27 00:37:36,576 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:36,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:36,767 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:37:36,809 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:36,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:36,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:36,851 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:37:36,855 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9ea15b3450> has no local changes
2025-07-27 00:37:36,855 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:37:36,862 [ scc.git] DEBUG [detached HEAD 7bec56d] merge master -Dorg -Ssuccess-only
2025-07-27 00:37:36,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:36,863 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:37:37,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:37,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-07-27 00:37:37,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:37,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-07-27 00:37:38,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:38,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a24a128d514126929476c541b2ec2853ec66e7d0 HTTP/1.1" 200 None
2025-07-27 00:37:38,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:38,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a24a128d514126929476c541b2ec2853ec66e7d0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:39,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:39,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a24a128d514126929476c541b2ec2853ec66e7d0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:37:39,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:39,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a24a128d514126929476c541b2ec2853ec66e7d0 HTTP/1.1" 200 None
2025-07-27 00:37:40,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:40,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a24a128d514126929476c541b2ec2853ec66e7d0?per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:40,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:40,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a24a128d514126929476c541b2ec2853ec66e7d0 HTTP/1.1" 200 None
2025-07-27 00:37:40,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:41,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a24a128d514126929476c541b2ec2853ec66e7d0/status HTTP/1.1" 200 None
2025-07-27 00:37:41,181 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-07-27 00:37:41,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:41,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-07-27 00:37:41,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:42,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-07-27 00:37:42,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:42,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-07-27 00:37:42,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:43,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-07-27 00:37:43,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:43,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/61f5f2fc72e94244b1312e7b66254336a4eef5bd HTTP/1.1" 200 None
2025-07-27 00:37:43,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:44,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/61f5f2fc72e94244b1312e7b66254336a4eef5bd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:44,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:44,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/61f5f2fc72e94244b1312e7b66254336a4eef5bd/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:37:44,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:45,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-07-27 00:37:45,394 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:45,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-07-27 00:37:45,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:46,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-07-27 00:37:46,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:46,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-07-27 00:37:46,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:47,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-07-27 00:37:47,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:47,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-07-27 00:37:47,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:48,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-07-27 00:37:48,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:48,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-07-27 00:37:48,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:49,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-07-27 00:37:49,149 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:37:49,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-07-27 00:37:49,149 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:49,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:49,152 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:37:49,154 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:37:49,154 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:37:49,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:37:49,172 [ scc.git] DEBUG Updating 11d3587..f7eea7c
2025-07-27 00:37:49,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:49,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-07-27 00:37:50,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:50,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-07-27 00:37:50,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:51,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-07-27 00:37:51,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:51,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-07-27 00:37:52,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:52,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-07-27 00:37:52,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:53,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-07-27 00:37:53,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:53,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-07-27 00:37:53,922 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-07-27 00:37:54,203 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-07-27 00:37:54,203 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-07-27 00:37:54,207 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:37:54,207 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:54,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:54,209 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a24a128d514126929476c541b2ec2853ec66e7d0'
2025-07-27 00:37:54,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:54,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) a24a128d514126929476c541b2ec2853ec66e7d0'
2025-07-27 00:37:54,224 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-07-27 00:37:54,225 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:37:54,228 [ scc.git] DEBUG src/omero_zarr/masks.py | 5 +++--
2025-07-27 00:37:54,228 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++--------------
2025-07-27 00:37:54,228 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 16 deletions(-)
2025-07-27 00:37:54,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:54,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:37:54,395 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:37:54,436 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:37:54,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:37:54,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:37:54,478 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:37:54,482 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9d1ed0> has no local changes
2025-07-27 00:37:54,482 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:37:54,489 [ scc.git] DEBUG [detached HEAD 7f9b66a] merge master -Dorg -Ssuccess-only
2025-07-27 00:37:54,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:37:54,490 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:37:54,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:54,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-07-27 00:37:55,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:55,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None
2025-07-27 00:37:55,532 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:37:55,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:56,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None
2025-07-27 00:37:56,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:56,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:37:56,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:57,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:37:57,372 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:57,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None
2025-07-27 00:37:57,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:58,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:37:58,071 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-07-27 00:37:58,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:58,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/638 HTTP/1.1" 200 None
2025-07-27 00:37:58,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:59,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-07-27 00:37:59,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:37:59,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-07-27 00:37:59,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:00,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None
2025-07-27 00:38:00,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:00,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None
2025-07-27 00:38:00,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:01,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-07-27 00:38:01,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:01,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:01,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:02,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:02,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:02,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-07-27 00:38:02,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:02,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:02,999 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-07-27 00:38:03,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:03,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-07-27 00:38:03,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:03,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None
2025-07-27 00:38:04,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:04,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None
2025-07-27 00:38:04,491 [ scc.repo] DEBUG # ... Include label: include
2025-07-27 00:38:04,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:05,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f65a33ea4b5b764874dd132c5608ac1c8954191 HTTP/1.1" 200 None
2025-07-27 00:38:05,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:05,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f65a33ea4b5b764874dd132c5608ac1c8954191/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:05,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:06,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f65a33ea4b5b764874dd132c5608ac1c8954191/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:06,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:06,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2f65a33ea4b5b764874dd132c5608ac1c8954191 HTTP/1.1" 200 None
2025-07-27 00:38:06,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:06,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2f65a33ea4b5b764874dd132c5608ac1c8954191?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:06,965 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border'
2025-07-27 00:38:07,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:07,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None
2025-07-27 00:38:07,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:07,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None
2025-07-27 00:38:08,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:08,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-07-27 00:38:08,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:09,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:09,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:09,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:09,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:10,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-07-27 00:38:10,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:10,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:10,538 [ scc.repo] DEBUG - PR 612 will-moore 'Script version'
2025-07-27 00:38:10,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:11,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-07-27 00:38:11,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:11,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-07-27 00:38:11,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:12,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-07-27 00:38:12,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:12,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:12,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:13,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:13,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:13,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-07-27 00:38:13,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:14,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:14,048 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-07-27 00:38:14,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:14,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None
2025-07-27 00:38:14,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:15,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None
2025-07-27 00:38:15,261 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:15,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None
2025-07-27 00:38:15,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:16,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:16,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:16,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:16,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:17,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None
2025-07-27 00:38:17,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:17,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:17,534 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature'
2025-07-27 00:38:17,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:18,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-07-27 00:38:18,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:18,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-07-27 00:38:18,558 [ scc.repo] DEBUG # ... Include label: include
2025-07-27 00:38:18,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:19,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1376c3b561307534ceaff651a6269c8bf10a029e HTTP/1.1" 200 None
2025-07-27 00:38:19,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:19,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1376c3b561307534ceaff651a6269c8bf10a029e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:19,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:20,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1376c3b561307534ceaff651a6269c8bf10a029e HTTP/1.1" 200 None
2025-07-27 00:38:20,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:20,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1376c3b561307534ceaff651a6269c8bf10a029e?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:20,548 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-07-27 00:38:20,548 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:38:20,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-07-27 00:38:20,549 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:20,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:20,552 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:38:20,555 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:38:20,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:38:20,559 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:38:20,571 [ scc.git] DEBUG Updating 9cc36cde..3e8fa730
2025-07-27 00:38:20,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:21,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-07-27 00:38:21,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:21,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-07-27 00:38:22,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:22,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-07-27 00:38:22,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:23,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-07-27 00:38:23,031 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-07-27 00:38:23,332 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:23,332 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-07-27 00:38:23,337 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head'
2025-07-27 00:38:23,619 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:23,619 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD
2025-07-27 00:38:23,624 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-07-27 00:38:23,907 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:23,907 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-07-27 00:38:23,912 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-07-27 00:38:24,192 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:24,192 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-07-27 00:38:24,197 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-07-27 00:38:24,473 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:24,473 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-07-27 00:38:24,478 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head'
2025-07-27 00:38:24,760 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:24,760 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD
2025-07-27 00:38:24,765 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head'
2025-07-27 00:38:25,042 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-07-27 00:38:25,042 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD
2025-07-27 00:38:25,046 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:38:25,047 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:25,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:25,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1376c3b561307534ceaff651a6269c8bf10a029e'
2025-07-27 00:38:25,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:25,058 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 1376c3b561307534ceaff651a6269c8bf10a029e'
2025-07-27 00:38:25,077 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:25,088 [ scc.git] DEBUG .gitignore | 2 +
2025-07-27 00:38:25,088 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/css/figure.css | 20 +-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/index.html | 34 +-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-07-27 00:38:25,088 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++-
2025-07-27 00:38:25,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:25,089 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-07-27 00:38:25,089 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-07-27 00:38:25,089 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-07-27 00:38:25,089 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++----
2025-07-27 00:38:25,089 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-)
2025-07-27 00:38:25,089 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-07-27 00:38:25,089 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-07-27 00:38:25,089 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-07-27 00:38:25,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:25,270 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895'
2025-07-27 00:38:25,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:25,280 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895'
2025-07-27 00:38:25,312 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-07-27 00:38:25,312 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-07-27 00:38:25,312 [ scc.git] DEBUG Auto-merging src/index.html
2025-07-27 00:38:25,312 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2025-07-27 00:38:25,312 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-07-27 00:38:25,312 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-07-27 00:38:25,313 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:25,319 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++--
2025-07-27 00:38:25,319 [ scc.git] DEBUG src/css/figure.css | 133 ++++++-
2025-07-27 00:38:25,319 [ scc.git] DEBUG src/index.html | 4 +
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++--
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++--
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++-
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 +
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++
2025-07-27 00:38:25,320 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++
2025-07-27 00:38:25,320 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-)
2025-07-27 00:38:25,320 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js
2025-07-27 00:38:25,320 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html
2025-07-27 00:38:25,320 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html
2025-07-27 00:38:25,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:25,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:25,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-07-27 00:38:25,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:25,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-07-27 00:38:25,755 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:25,759 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-07-27 00:38:25,759 [ scc.git] DEBUG README.rst | 4 +-
2025-07-27 00:38:25,759 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-07-27 00:38:25,759 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-07-27 00:38:25,759 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-07-27 00:38:25,759 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-07-27 00:38:25,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:26,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:26,162 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-07-27 00:38:26,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:26,172 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-07-27 00:38:26,200 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-07-27 00:38:26,200 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:38:26,200 [ scc.git] DEBUG Auto-merging package.json
2025-07-27 00:38:26,200 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-07-27 00:38:26,200 [ scc.git] DEBUG Auto-merging src/index.html
2025-07-27 00:38:26,201 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:26,209 [ scc.git] DEBUG .bumpversion.cfg | 2 +
2025-07-27 00:38:26,209 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +-
2025-07-27 00:38:26,209 [ scc.git] DEBUG omero_figure/urls.py | 3 +
2025-07-27 00:38:26,209 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++
2025-07-27 00:38:26,209 [ scc.git] DEBUG package-lock.json | 8 +-
2025-07-27 00:38:26,209 [ scc.git] DEBUG package.json | 3 +-
2025-07-27 00:38:26,209 [ scc.git] DEBUG src/css/figure.css | 2 +-
2025-07-27 00:38:26,209 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++
2025-07-27 00:38:26,209 [ scc.git] DEBUG src/index.html | 20 +++--
2025-07-27 00:38:26,209 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++
2025-07-27 00:38:26,209 [ scc.git] DEBUG vite.config.js | 3 +
2025-07-27 00:38:26,209 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-)
2025-07-27 00:38:26,209 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html
2025-07-27 00:38:26,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:26,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:26,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2f65a33ea4b5b764874dd132c5608ac1c8954191'
2025-07-27 00:38:26,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:26,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 2f65a33ea4b5b764874dd132c5608ac1c8954191'
2025-07-27 00:38:26,631 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-07-27 00:38:26,631 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2025-07-27 00:38:26,631 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-07-27 00:38:26,631 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js
2025-07-27 00:38:26,632 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:38:26,632 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:38:26,638 [ scc.git] DEBUG Calling 'git reset --hard ddd5b429080069e25ba8441d3972c4fd5a2fd52c'
2025-07-27 00:38:26,647 [ scc.git] DEBUG HEAD is now at ddd5b429 merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-07-27 00:38:26,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:27,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:27,017 [ scc.git] DEBUG Calling 'git merge-base 3e8fa73092b997ca81b2cb5a9ab19ce81f159d45 2f65a33ea4b5b764874dd132c5608ac1c8954191'
2025-07-27 00:38:27,021 [ scc.git] DEBUG Calling 'git diff --name-only 3e8fa73092b997ca81b2cb5a9ab19ce81f159d45..3e8fa73092b997ca81b2cb5a9ab19ce81f159d45'
2025-07-27 00:38:27,025 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/panel_view.js
- PR #605 Tom-TBT 'Colorbar feature'
- src/js/views/panel_view.js
--conflicts
2025-07-27 00:38:27,027 [ scc.config] DEBUG Found github.token
2025-07-27 00:38:27,027 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts.
2025-07-27 00:38:27,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29'
2025-07-27 00:38:27,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:27,037 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-07-27 00:38:27,054 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-07-27 00:38:27,054 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js
2025-07-27 00:38:27,055 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:38:27,055 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:38:27,059 [ scc.git] DEBUG Calling 'git reset --hard ddd5b429080069e25ba8441d3972c4fd5a2fd52c'
2025-07-27 00:38:27,064 [ scc.git] DEBUG HEAD is now at ddd5b429 merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-07-27 00:38:27,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:27,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:27,441 [ scc.git] DEBUG Calling 'git merge-base 3e8fa73092b997ca81b2cb5a9ab19ce81f159d45 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-07-27 00:38:27,445 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..3e8fa73092b997ca81b2cb5a9ab19ce81f159d45'
2025-07-27 00:38:27,448 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/right_panel_view.js
- PR #605 Tom-TBT 'Colorbar feature'
- src/js/views/right_panel_view.js
--conflicts
2025-07-27 00:38:27,451 [ scc.config] DEBUG Found github.token
2025-07-27 00:38:27,451 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts.
2025-07-27 00:38:27,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf'
2025-07-27 00:38:27,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:27,460 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf'
2025-07-27 00:38:27,475 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:38:27,475 [ scc.git] DEBUG Auto-merging package.json
2025-07-27 00:38:27,476 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:27,480 [ scc.git] DEBUG package-lock.json | 8 ++++----
2025-07-27 00:38:27,480 [ scc.git] DEBUG package.json | 2 +-
2025-07-27 00:38:27,480 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2025-07-27 00:38:27,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:27,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:27,867 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:38:27,909 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:27,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:27,911 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:38:27,951 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:38:27,956 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9c0550> has no local changes
2025-07-27 00:38:27,956 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 638 Rdornier 'Fix arrow opacity' (user: Rdornier)
- PR 637 Rdornier 'Fix scalebar position' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..3e8fa730
Previously merged:
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:38:27,966 [ scc.git] DEBUG [detached HEAD 48b51e27] merge master -Dorg -Ssuccess-only
2025-07-27 00:38:27,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:38:27,966 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:38:28,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:28,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-07-27 00:38:28,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:29,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-07-27 00:38:29,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:29,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-07-27 00:38:29,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:30,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-07-27 00:38:30,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:30,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:30,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:31,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-07-27 00:38:31,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:31,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:31,491 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-07-27 00:38:31,492 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:38:31,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-07-27 00:38:31,492 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:31,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:31,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:38:31,497 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:38:31,497 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:38:31,500 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:38:31,503 [ scc.git] DEBUG Already up to date.
2025-07-27 00:38:31,503 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-07-27 00:38:31,787 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-07-27 00:38:31,787 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-07-27 00:38:31,792 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:38:31,792 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:31,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:31,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-07-27 00:38:31,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:31,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-07-27 00:38:31,808 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-07-27 00:38:31,809 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:31,812 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-07-27 00:38:31,812 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-07-27 00:38:31,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:31,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:31,998 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:38:32,039 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:32,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:32,042 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:38:32,080 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:38:32,084 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9ab710> has no local changes
2025-07-27 00:38:32,084 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:38:32,090 [ scc.git] DEBUG [detached HEAD fd9c5a2] merge master -Dorg -Ssuccess-only
2025-07-27 00:38:32,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:38:32,090 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:38:32,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:32,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-07-27 00:38:32,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:33,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-07-27 00:38:33,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:33,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-07-27 00:38:33,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:34,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-07-27 00:38:34,082 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:34,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:34,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-07-27 00:38:34,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:35,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:35,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:35,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:35,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:36,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-07-27 00:38:36,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:36,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:36,604 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-07-27 00:38:36,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:37,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-07-27 00:38:37,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:37,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-07-27 00:38:37,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:38,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-07-27 00:38:38,131 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:38,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:38,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-07-27 00:38:38,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:39,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:39,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:39,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:40,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:40,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-07-27 00:38:40,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:40,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:40,723 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-07-27 00:38:40,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:41,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-07-27 00:38:41,206 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:41,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:41,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-07-27 00:38:42,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:42,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:42,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:42,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:43,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:43,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-07-27 00:38:43,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:43,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:43,835 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-07-27 00:38:44,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:44,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-07-27 00:38:44,320 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:44,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:44,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-07-27 00:38:45,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:45,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:45,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:45,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:46,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:46,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-07-27 00:38:46,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:47,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:47,102 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-07-27 00:38:47,353 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:47,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-07-27 00:38:47,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:48,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-07-27 00:38:48,109 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:48,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:48,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-07-27 00:38:48,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:49,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:49,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:49,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:50,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:50,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-07-27 00:38:50,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:50,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:50,802 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-07-27 00:38:51,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:51,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-07-27 00:38:51,312 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:51,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:51,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-07-27 00:38:52,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:52,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:52,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:52,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:53,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:53,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-07-27 00:38:53,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:54,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:54,007 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-07-27 00:38:54,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:54,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-07-27 00:38:54,566 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:38:54,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:55,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-07-27 00:38:55,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:55,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:38:55,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:56,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:38:56,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:56,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-07-27 00:38:57,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:57,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:38:57,224 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-07-27 00:38:57,224 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:38:57,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-07-27 00:38:57,225 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:57,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:57,228 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:38:57,230 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:38:57,230 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:38:57,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:38:57,236 [ scc.git] DEBUG Already up to date.
2025-07-27 00:38:57,236 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-07-27 00:38:57,510 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:57,510 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-07-27 00:38:57,515 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-07-27 00:38:57,795 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:57,795 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-07-27 00:38:57,799 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-07-27 00:38:58,074 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:58,074 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-07-27 00:38:58,078 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-07-27 00:38:58,361 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:58,361 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-07-27 00:38:58,366 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-07-27 00:38:58,641 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:58,642 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-07-27 00:38:58,646 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-07-27 00:38:58,914 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:58,914 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-07-27 00:38:58,918 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-07-27 00:38:59,191 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-07-27 00:38:59,191 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-07-27 00:38:59,195 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:38:59,195 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:38:59,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:59,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-07-27 00:38:59,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:59,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-07-27 00:38:59,212 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:59,218 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-07-27 00:38:59,218 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-07-27 00:38:59,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:59,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:59,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-07-27 00:38:59,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:59,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-07-27 00:38:59,407 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:38:59,408 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:38:59,413 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-07-27 00:38:59,413 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-07-27 00:38:59,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:38:59,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:38:59,820 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-07-27 00:38:59,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:38:59,825 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-07-27 00:38:59,842 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:38:59,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-07-27 00:38:59,843 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:38:59,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:38:59,846 [ scc.git] DEBUG Calling 'git reset --hard d28d36bec51008424b3e6479d1941102061704af'
2025-07-27 00:38:59,851 [ scc.git] DEBUG HEAD is now at d28d36b merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-07-27 00:39:00,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:00,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:00,252 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-07-27 00:39:00,256 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-07-27 00:39:00,258 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-07-27 00:39:00,261 [ scc.config] DEBUG Found github.token
2025-07-27 00:39:00,261 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-07-27 00:39:00,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-07-27 00:39:00,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:00,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-07-27 00:39:00,282 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:39:00,283 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:00,288 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-07-27 00:39:00,288 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-07-27 00:39:00,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:00,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:00,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-07-27 00:39:00,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:00,698 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-07-27 00:39:00,715 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:39:00,716 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:00,721 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-07-27 00:39:00,721 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-07-27 00:39:00,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:01,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:01,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-07-27 00:39:01,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:01,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-07-27 00:39:01,162 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:39:01,162 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-07-27 00:39:01,162 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:39:01,163 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:39:01,166 [ scc.git] DEBUG Calling 'git reset --hard 7550448eed2721653a1a7aed024fdab8cb8cb421'
2025-07-27 00:39:01,171 [ scc.git] DEBUG HEAD is now at 7550448 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-07-27 00:39:01,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:01,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:01,575 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-07-27 00:39:01,578 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-07-27 00:39:01,581 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-07-27 00:39:01,583 [ scc.config] DEBUG Found github.token
2025-07-27 00:39:01,583 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-07-27 00:39:01,584 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-07-27 00:39:01,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:01,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-07-27 00:39:01,608 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:39:01,608 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-07-27 00:39:01,608 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:39:01,609 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:39:01,612 [ scc.git] DEBUG Calling 'git reset --hard 7550448eed2721653a1a7aed024fdab8cb8cb421'
2025-07-27 00:39:01,617 [ scc.git] DEBUG HEAD is now at 7550448 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-07-27 00:39:01,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:02,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:02,018 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-07-27 00:39:02,022 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-07-27 00:39:02,025 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-07-27 00:39:02,027 [ scc.config] DEBUG Found github.token
2025-07-27 00:39:02,027 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-07-27 00:39:02,027 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:02,068 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:02,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:02,070 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:02,109 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:02,114 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9ea19590> has no local changes
2025-07-27 00:39:02,114 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:02,121 [ scc.git] DEBUG [detached HEAD 765e3b5] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:02,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:02,121 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:02,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:02,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-07-27 00:39:02,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:03,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-07-27 00:39:03,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:03,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-07-27 00:39:03,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:04,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-07-27 00:39:04,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:04,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-07-27 00:39:04,533 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:39:04,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:05,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-07-27 00:39:05,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:05,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:05,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:06,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:39:06,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:06,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-07-27 00:39:06,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:07,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:07,152 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-07-27 00:39:07,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:07,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-07-27 00:39:07,634 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:39:07,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:08,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-07-27 00:39:08,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:08,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:08,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:09,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:39:09,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:09,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-07-27 00:39:10,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:10,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:10,291 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-07-27 00:39:10,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:10,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-07-27 00:39:11,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:11,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-07-27 00:39:11,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:11,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-07-27 00:39:11,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:12,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-07-27 00:39:12,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:12,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-07-27 00:39:12,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:13,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:13,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:13,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-07-27 00:39:13,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:14,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:14,164 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-07-27 00:39:14,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:14,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-07-27 00:39:14,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:15,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-07-27 00:39:15,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:15,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-07-27 00:39:15,860 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:16,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:16,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:16,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-07-27 00:39:16,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:16,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:16,992 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-07-27 00:39:17,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:17,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-07-27 00:39:17,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:17,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-07-27 00:39:18,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:18,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-07-27 00:39:18,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:18,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:19,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:19,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-07-27 00:39:19,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:19,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:19,935 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-07-27 00:39:20,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:20,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-07-27 00:39:20,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:20,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-07-27 00:39:21,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:21,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-07-27 00:39:21,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:21,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:22,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:22,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:39:22,479 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:39:22,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-07-27 00:39:22,479 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:22,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:22,482 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:39:22,484 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:39:22,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:39:22,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:39:22,496 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-07-27 00:39:22,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:23,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-07-27 00:39:23,133 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-07-27 00:39:23,436 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-07-27 00:39:23,436 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-07-27 00:39:23,441 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-07-27 00:39:23,720 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-07-27 00:39:23,720 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-07-27 00:39:23,724 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-07-27 00:39:24,005 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-07-27 00:39:24,005 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-07-27 00:39:24,010 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-07-27 00:39:24,291 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-07-27 00:39:24,292 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-07-27 00:39:24,296 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-07-27 00:39:24,582 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-07-27 00:39:24,582 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-07-27 00:39:24,586 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:39:24,587 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:24,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:24,589 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-07-27 00:39:24,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:24,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-07-27 00:39:24,612 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-07-27 00:39:24,612 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-07-27 00:39:24,615 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:24,619 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-07-27 00:39:24,619 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-07-27 00:39:24,619 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-07-27 00:39:24,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:24,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:24,793 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-07-27 00:39:24,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:24,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-07-27 00:39:24,822 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-07-27 00:39:24,822 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-07-27 00:39:24,822 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-07-27 00:39:24,822 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-07-27 00:39:24,823 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:24,828 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-07-27 00:39:24,828 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-07-27 00:39:24,828 [ scc.git] DEBUG src/app/header.html | 5 +
2025-07-27 00:39:24,828 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-07-27 00:39:24,828 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-07-27 00:39:24,828 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-07-27 00:39:24,828 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-07-27 00:39:24,828 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-07-27 00:39:25,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:25,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:25,214 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-07-27 00:39:25,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:25,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-07-27 00:39:25,237 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-07-27 00:39:25,238 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:25,242 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-07-27 00:39:25,242 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-07-27 00:39:25,242 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-07-27 00:39:25,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:25,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:25,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-07-27 00:39:25,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:25,652 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-07-27 00:39:25,669 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:25,679 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-07-27 00:39:25,679 [ scc.git] DEBUG package.json | 2 +-
2025-07-27 00:39:25,679 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-07-27 00:39:25,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:26,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:26,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-07-27 00:39:26,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:26,096 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-07-27 00:39:26,133 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:39:26,133 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-07-27 00:39:26,134 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:39:26,134 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:39:26,137 [ scc.git] DEBUG Calling 'git reset --hard d31a8012bb9d0793c1f2f5d60b1cb8861a97418e'
2025-07-27 00:39:26,145 [ scc.git] DEBUG HEAD is now at d31a801 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-07-27 00:39:26,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:26,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:26,517 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-07-27 00:39:26,520 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-07-27 00:39:26,523 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-07-27 00:39:26,525 [ scc.config] DEBUG Found github.token
2025-07-27 00:39:26,525 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-07-27 00:39:26,525 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:26,565 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:26,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:26,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:26,607 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:26,614 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e94a910> has no local changes
2025-07-27 00:39:26,614 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:26,624 [ scc.git] DEBUG [detached HEAD 052da56] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:26,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:26,624 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:26,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:27,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-07-27 00:39:27,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:27,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-07-27 00:39:27,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:28,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-07-27 00:39:28,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:28,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:28,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:29,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-07-27 00:39:29,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:29,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:29,443 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:39:29,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:29,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-07-27 00:39:30,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:30,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-07-27 00:39:30,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:30,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-07-27 00:39:31,226 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:31,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:31,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:32,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-07-27 00:39:32,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:32,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:32,463 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-07-27 00:39:32,464 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:39:32,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-07-27 00:39:32,464 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:32,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:32,467 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:39:32,469 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:39:32,469 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:39:32,472 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:39:32,475 [ scc.git] DEBUG Already up to date.
2025-07-27 00:39:32,475 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-07-27 00:39:32,764 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-07-27 00:39:32,764 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-07-27 00:39:32,768 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-07-27 00:39:33,049 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-07-27 00:39:33,049 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-07-27 00:39:33,054 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:39:33,054 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:33,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:33,056 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-07-27 00:39:33,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:33,063 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-07-27 00:39:33,071 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:33,075 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-07-27 00:39:33,075 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-07-27 00:39:33,075 [ scc.git] DEBUG requirements.txt | 2 +-
2025-07-27 00:39:33,075 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-07-27 00:39:33,075 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-07-27 00:39:33,075 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-07-27 00:39:33,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:33,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:33,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-07-27 00:39:33,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:33,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-07-27 00:39:33,274 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:33,277 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-07-27 00:39:33,277 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-27 00:39:33,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:33,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:33,703 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:33,746 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:33,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:33,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:33,790 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:33,794 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e945d50> has no local changes
2025-07-27 00:39:33,794 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:33,801 [ scc.git] DEBUG [detached HEAD c452de5] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:33,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:33,801 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:33,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:34,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-07-27 00:39:34,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:34,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-07-27 00:39:34,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:35,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-07-27 00:39:35,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:35,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-07-27 00:39:35,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:36,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:36,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:36,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-07-27 00:39:36,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:37,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:37,184 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-07-27 00:39:37,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:37,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-07-27 00:39:37,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:38,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-07-27 00:39:38,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:38,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-07-27 00:39:38,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:39,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:39,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:39,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-07-27 00:39:39,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:40,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:40,132 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-07-27 00:39:40,132 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:39:40,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-07-27 00:39:40,132 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:40,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:40,135 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:39:40,137 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:39:40,137 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:39:40,140 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:39:40,148 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-07-27 00:39:40,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:40,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-07-27 00:39:40,760 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-07-27 00:39:41,042 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-07-27 00:39:41,042 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-07-27 00:39:41,046 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-07-27 00:39:41,317 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-07-27 00:39:41,318 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-07-27 00:39:41,322 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:39:41,322 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:41,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:41,325 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-07-27 00:39:41,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:41,332 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-07-27 00:39:41,345 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-07-27 00:39:41,345 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-07-27 00:39:41,345 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-07-27 00:39:41,345 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-07-27 00:39:41,345 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:39:41,345 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:39:41,348 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-07-27 00:39:41,353 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-07-27 00:39:41,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:41,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:41,528 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-07-27 00:39:41,533 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-07-27 00:39:41,536 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-07-27 00:39:41,538 [ scc.config] DEBUG Found github.token
2025-07-27 00:39:41,538 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-07-27 00:39:41,538 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-07-27 00:39:41,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:41,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-07-27 00:39:41,560 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-07-27 00:39:41,560 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-07-27 00:39:41,560 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-07-27 00:39:41,560 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:39:41,561 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:39:41,564 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-07-27 00:39:41,569 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-07-27 00:39:41,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:41,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:41,949 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-07-27 00:39:41,954 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-07-27 00:39:41,956 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-07-27 00:39:41,959 [ scc.config] DEBUG Found github.token
2025-07-27 00:39:41,959 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-07-27 00:39:41,959 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:42,000 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:42,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:42,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:42,042 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:42,047 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9dbc90> has no local changes
2025-07-27 00:39:42,047 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:42,053 [ scc.git] DEBUG [detached HEAD 43c9660] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:42,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:42,054 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:42,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:42,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-07-27 00:39:42,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:43,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-07-27 00:39:43,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:43,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-07-27 00:39:43,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:44,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:44,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:44,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:39:44,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:45,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-07-27 00:39:45,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:45,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:45,507 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:39:45,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:45,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-07-27 00:39:46,000 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:39:46,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:46,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-07-27 00:39:46,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:47,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:47,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:47,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:39:47,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:48,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-07-27 00:39:48,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:48,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:48,573 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-07-27 00:39:48,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:49,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-07-27 00:39:49,075 [ scc.repo] DEBUG # ... Include label: dependencies
2025-07-27 00:39:49,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:49,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-07-27 00:39:49,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:50,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:39:50,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:50,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:39:50,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:51,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-07-27 00:39:51,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:51,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:39:51,681 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-07-27 00:39:51,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:52,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-07-27 00:39:52,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:52,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-07-27 00:39:52,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:53,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-07-27 00:39:53,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:53,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-07-27 00:39:53,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:54,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-07-27 00:39:54,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:54,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-07-27 00:39:54,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:55,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-07-27 00:39:55,143 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:39:55,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-07-27 00:39:55,143 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:55,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:55,146 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:39:55,149 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:39:55,149 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:39:55,152 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:39:55,155 [ scc.git] DEBUG Already up to date.
2025-07-27 00:39:55,155 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-07-27 00:39:55,439 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-07-27 00:39:55,440 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-07-27 00:39:55,443 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-07-27 00:39:55,722 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-07-27 00:39:55,722 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-07-27 00:39:55,727 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-07-27 00:39:56,010 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-07-27 00:39:56,010 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-07-27 00:39:56,015 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:39:56,015 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:56,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:56,017 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-07-27 00:39:56,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:56,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-07-27 00:39:56,031 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:56,034 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-07-27 00:39:56,034 [ scc.git] DEBUG package.json | 2 +-
2025-07-27 00:39:56,034 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-07-27 00:39:56,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:56,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:56,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-07-27 00:39:56,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:56,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-07-27 00:39:56,242 [ scc.git] DEBUG Auto-merging package-lock.json
2025-07-27 00:39:56,242 [ scc.git] DEBUG Auto-merging package.json
2025-07-27 00:39:56,243 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:56,247 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-07-27 00:39:56,247 [ scc.git] DEBUG package.json | 2 +-
2025-07-27 00:39:56,247 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-07-27 00:39:56,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:56,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:56,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-07-27 00:39:56,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:56,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-07-27 00:39:56,671 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:39:56,674 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-07-27 00:39:56,674 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-07-27 00:39:56,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:57,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:39:57,070 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:57,111 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:57,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:57,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:57,154 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:57,158 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c016110> has no local changes
2025-07-27 00:39:57,158 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:57,164 [ scc.git] DEBUG [detached HEAD fbdb924] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:57,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:57,165 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:57,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:57,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-07-27 00:39:57,516 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:39:57,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-07-27 00:39:57,516 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:57,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:57,519 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:39:57,522 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:39:57,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:39:57,525 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:39:57,528 [ scc.git] DEBUG Already up to date.
2025-07-27 00:39:57,528 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:39:57,528 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:57,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:57,531 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:57,572 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:57,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:57,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:57,614 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:57,618 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c024790> has no local changes
2025-07-27 00:39:57,618 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:57,624 [ scc.git] DEBUG [detached HEAD 6c096e8] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:57,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:57,625 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:57,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:58,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-07-27 00:39:58,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:58,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-07-27 00:39:58,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:59,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-07-27 00:39:59,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:39:59,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-07-27 00:39:59,517 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:39:59,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-07-27 00:39:59,517 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:59,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:59,520 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:39:59,523 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:39:59,523 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:39:59,526 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:39:59,529 [ scc.git] DEBUG Already up to date.
2025-07-27 00:39:59,529 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:39:59,529 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:59,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:59,532 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:39:59,574 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:39:59,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:39:59,576 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:39:59,617 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:39:59,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c01c910> has no local changes
2025-07-27 00:39:59,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:39:59,626 [ scc.git] DEBUG [detached HEAD 4fbf7ec] merge master -Dorg -Ssuccess-only
2025-07-27 00:39:59,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:39:59,627 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:39:59,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:00,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-07-27 00:40:00,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:00,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-07-27 00:40:00,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:01,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-07-27 00:40:01,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:01,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-07-27 00:40:01,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:02,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:02,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:02,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-07-27 00:40:02,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:03,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:03,099 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-07-27 00:40:03,099 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:03,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-07-27 00:40:03,099 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:03,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:03,102 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:03,105 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:03,105 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:03,108 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:03,111 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:03,111 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-07-27 00:40:03,391 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-07-27 00:40:03,391 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-07-27 00:40:03,395 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:03,395 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:03,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:03,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-07-27 00:40:03,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:03,404 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-07-27 00:40:03,413 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG Auto-merging setup.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-07-27 00:40:03,413 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:40:03,413 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:40:03,416 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-07-27 00:40:03,421 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-07-27 00:40:03,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:03,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:03,604 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-07-27 00:40:03,608 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-07-27 00:40:03,611 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- setup.py
- omero_signup/urls.py
- omero_signup/signup_settings.py
--conflicts
2025-07-27 00:40:03,614 [ scc.config] DEBUG Found github.token
2025-07-27 00:40:03,614 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-07-27 00:40:03,614 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:03,655 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:03,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:03,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:03,695 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:03,699 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9c1490> has no local changes
2025-07-27 00:40:03,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:03,706 [ scc.git] DEBUG [detached HEAD 1cc1caf] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:03,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:03,706 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:03,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:04,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-07-27 00:40:04,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:04,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-07-27 00:40:04,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:05,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-07-27 00:40:05,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:05,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:06,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:06,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:40:06,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:06,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-07-27 00:40:07,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:07,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:07,291 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-07-27 00:40:07,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:07,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-07-27 00:40:08,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:08,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-07-27 00:40:08,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:08,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-07-27 00:40:09,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:09,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:09,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:09,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:40:10,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:10,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-07-27 00:40:10,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:10,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-07-27 00:40:11,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:11,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-07-27 00:40:11,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:11,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-07-27 00:40:12,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:12,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-07-27 00:40:12,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:12,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:13,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:13,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-07-27 00:40:13,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:13,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:13,701 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-07-27 00:40:13,701 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:13,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-07-27 00:40:13,701 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:13,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:13,704 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:13,706 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:13,706 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:13,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:13,712 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:13,713 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-07-27 00:40:13,999 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-07-27 00:40:13,999 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-07-27 00:40:14,003 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-07-27 00:40:14,290 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-07-27 00:40:14,290 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-07-27 00:40:14,295 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:14,295 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:14,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:14,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-07-27 00:40:14,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:14,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-07-27 00:40:14,317 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:40:14,320 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-07-27 00:40:14,320 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-07-27 00:40:14,320 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-07-27 00:40:14,320 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-07-27 00:40:14,321 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-07-27 00:40:14,321 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-07-27 00:40:14,321 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-07-27 00:40:14,321 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-07-27 00:40:14,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-07-27 00:40:14,322 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-07-27 00:40:14,322 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-07-27 00:40:14,322 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-07-27 00:40:14,323 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-07-27 00:40:14,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:14,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-07-27 00:40:14,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:14,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-07-27 00:40:14,520 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:40:14,523 [ scc.git] DEBUG docker | 1 +
2025-07-27 00:40:14,523 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-07-27 00:40:14,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:14,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:14,946 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:14,988 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:14,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:14,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:15,028 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:15,032 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9a2150> has no local changes
2025-07-27 00:40:15,032 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:15,038 [ scc.git] DEBUG [detached HEAD ead65e2] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:15,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:15,039 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:15,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:15,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-07-27 00:40:15,407 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:15,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-07-27 00:40:15,408 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:15,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:15,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:15,413 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:15,413 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:15,416 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:15,419 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:15,419 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:15,419 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:15,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:15,421 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:15,461 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:15,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:15,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:15,504 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:15,508 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c04e690> has no local changes
2025-07-27 00:40:15,508 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:15,514 [ scc.git] DEBUG [detached HEAD 7d49ed6] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:15,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:15,515 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:15,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:15,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2025-07-27 00:40:15,862 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:15,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-07-27 00:40:15,862 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:15,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:15,865 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:15,867 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:15,867 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:15,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:15,878 [ scc.git] DEBUG Updating deab817..160d894
2025-07-27 00:40:16,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:16,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-07-27 00:40:16,528 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:16,528 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:16,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:16,530 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:16,573 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:16,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:16,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:16,614 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:16,618 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c0a3e10> has no local changes
2025-07-27 00:40:16,618 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:16,624 [ scc.git] DEBUG [detached HEAD 20db191] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:16,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:16,624 [ scc.git] INFO Overriding base-branch from master to main
2025-07-27 00:40:16,624 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:16,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:17,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-07-27 00:40:17,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:17,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-07-27 00:40:17,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:18,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-07-27 00:40:18,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:18,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-07-27 00:40:18,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:19,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:19,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:19,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:40:20,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:20,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-07-27 00:40:20,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:20,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-07-27 00:40:21,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:21,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-07-27 00:40:21,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:21,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-07-27 00:40:22,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:22,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:22,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:22,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-07-27 00:40:23,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:23,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:23,272 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-07-27 00:40:23,272 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:23,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-07-27 00:40:23,273 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:23,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:23,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-07-27 00:40:23,278 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:23,278 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-07-27 00:40:23,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-07-27 00:40:23,284 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:23,284 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-07-27 00:40:23,578 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-07-27 00:40:23,578 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-07-27 00:40:23,583 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:23,583 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:23,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:23,586 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-07-27 00:40:23,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:23,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-07-27 00:40:23,599 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-07-27 00:40:23,599 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-07-27 00:40:23,599 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:40:23,599 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:40:23,602 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-07-27 00:40:23,606 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-07-27 00:40:23,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:23,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:23,791 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-07-27 00:40:23,794 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-07-27 00:40:23,797 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-07-27 00:40:23,799 [ scc.config] DEBUG Found github.token
2025-07-27 00:40:23,799 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-07-27 00:40:23,799 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:23,839 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:23,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:23,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:23,880 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:23,883 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c07f6d0> has no local changes
2025-07-27 00:40:23,883 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:23,890 [ scc.git] DEBUG [detached HEAD 8eab309] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:23,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:23,890 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:24,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:24,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-07-27 00:40:24,235 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:24,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-07-27 00:40:24,235 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:24,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:24,238 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:24,240 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:24,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:24,243 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:24,246 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:24,246 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:24,246 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:24,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:24,249 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:24,290 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:24,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:24,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:24,332 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:24,336 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9e9f0850> has no local changes
2025-07-27 00:40:24,336 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:24,342 [ scc.git] DEBUG [detached HEAD 93cd68f] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:24,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:24,342 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:24,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:24,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-07-27 00:40:24,681 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:24,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-07-27 00:40:24,681 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:24,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:24,683 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:24,685 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:24,685 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:24,688 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:24,691 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:24,691 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:24,691 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:24,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:24,693 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:24,732 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:24,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:24,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:24,773 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:24,777 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c0d3410> has no local changes
2025-07-27 00:40:24,777 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:24,783 [ scc.git] DEBUG [detached HEAD d5aaa9f] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:24,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:24,784 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:24,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:25,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-07-27 00:40:25,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:25,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-07-27 00:40:25,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:26,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-07-27 00:40:26,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:26,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-07-27 00:40:26,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:27,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:27,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:27,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-07-27 00:40:27,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:28,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:28,114 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-07-27 00:40:28,114 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:28,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-07-27 00:40:28,114 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:28,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:28,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-07-27 00:40:28,119 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:28,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-07-27 00:40:28,122 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-07-27 00:40:28,125 [ scc.git] DEBUG Already up to date.
2025-07-27 00:40:28,125 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-07-27 00:40:28,406 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-07-27 00:40:28,406 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-07-27 00:40:28,410 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:28,410 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:28,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:28,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-07-27 00:40:28,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:28,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-07-27 00:40:28,427 [ scc.git] DEBUG Auto-merging Dockerfile
2025-07-27 00:40:28,427 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-07-27 00:40:28,428 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:40:28,428 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:40:28,431 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-07-27 00:40:28,436 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-07-27 00:40:28,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:28,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:28,605 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-07-27 00:40:28,608 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-07-27 00:40:28,611 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-07-27 00:40:28,613 [ scc.config] DEBUG Found github.token
2025-07-27 00:40:28,613 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-07-27 00:40:28,613 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:28,654 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:28,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:28,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:28,695 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:28,699 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c01c190> has no local changes
2025-07-27 00:40:28,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:28,706 [ scc.git] DEBUG [detached HEAD bf6d8e5] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:28,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:28,706 [ scc.git] INFO Overriding base-branch from master to develop
2025-07-27 00:40:28,706 [ scc.repo] DEBUG ## PRs found:
2025-07-27 00:40:28,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:29,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-07-27 00:40:29,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:29,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-07-27 00:40:29,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:30,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-07-27 00:40:30,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:30,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-07-27 00:40:30,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:31,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:31,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:31,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-07-27 00:40:31,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:32,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-07-27 00:40:32,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:32,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:32,559 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-07-27 00:40:32,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:33,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-07-27 00:40:33,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:33,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-07-27 00:40:33,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:34,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-07-27 00:40:34,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:34,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-07-27 00:40:34,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:35,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-07-27 00:40:35,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:35,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-07-27 00:40:35,447 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-07-27 00:40:35,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:35,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-07-27 00:40:36,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:36,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-07-27 00:40:36,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:36,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-07-27 00:40:37,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:37,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-07-27 00:40:37,407 [ scc.repo] DEBUG ## Branches found:
2025-07-27 00:40:37,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-07-27 00:40:37,408 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:37,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:37,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-07-27 00:40:37,413 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-07-27 00:40:37,413 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-07-27 00:40:37,416 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-07-27 00:40:37,427 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-07-27 00:40:37,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:38,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-07-27 00:40:38,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:38,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-07-27 00:40:38,694 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-07-27 00:40:38,985 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-07-27 00:40:38,985 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-07-27 00:40:38,989 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-07-27 00:40:39,288 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-07-27 00:40:39,288 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-07-27 00:40:39,292 [ scc.git] DEBUG ## Unique users: []
2025-07-27 00:40:39,292 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:39,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:39,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-07-27 00:40:39,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:39,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-07-27 00:40:39,315 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-07-27 00:40:39,315 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-07-27 00:40:39,316 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-07-27 00:40:39,318 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-07-27 00:40:39,322 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-07-27 00:40:39,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:39,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:39,518 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-07-27 00:40:39,524 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-07-27 00:40:39,528 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#489](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-07-27 00:40:39,530 [ scc.config] DEBUG Found github.token
2025-07-27 00:40:39,530 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-07-27 00:40:39,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-07-27 00:40:39,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:39,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-07-27 00:40:39,547 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-07-27 00:40:39,550 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-07-27 00:40:39,551 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-07-27 00:40:39,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:39,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:39,984 [ scc.git] DEBUG Calling 'git submodule update'
2025-07-27 00:40:40,027 [ scc.git] DEBUG Get sha1 of %s
2025-07-27 00:40:40,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-07-27 00:40:40,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:40,068 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:40,072 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9e9c0cd390> has no local changes
2025-07-27 00:40:40,072 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:40,078 [ scc.git] DEBUG [detached HEAD 7614622] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:40,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:40,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-07-27 00:40:40,155 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-07-27 00:40:40,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:40,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:40,417 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-07-27 00:40:40,419 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-07-27 00:40:40,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:40,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:40,859 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-07-27 00:40:40,861 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-07-27 00:40:41,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:41,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:41,295 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-07-27 00:40:41,297 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-07-27 00:40:41,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:41,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:41,715 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-07-27 00:40:41,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:42,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:42,131 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-07-27 00:40:42,133 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-07-27 00:40:42,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:42,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:42,556 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-07-27 00:40:42,559 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-07-27 00:40:42,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:42,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:42,973 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-07-27 00:40:42,975 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-07-27 00:40:43,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:43,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:43,389 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-07-27 00:40:43,391 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-07-27 00:40:43,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:43,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:43,840 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-07-27 00:40:43,842 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-07-27 00:40:44,086 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:44,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:44,275 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-07-27 00:40:44,277 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-07-27 00:40:44,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:44,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:44,693 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-07-27 00:40:44,695 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-07-27 00:40:44,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:45,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:45,111 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-07-27 00:40:45,114 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-07-27 00:40:45,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:45,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:45,531 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-07-27 00:40:45,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:45,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:45,962 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-07-27 00:40:46,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:46,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:46,384 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-07-27 00:40:46,386 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-07-27 00:40:46,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:46,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:46,825 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-07-27 00:40:47,069 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:47,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:47,244 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-07-27 00:40:47,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:47,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:47,675 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-07-27 00:40:47,677 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-07-27 00:40:47,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:48,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:48,094 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-07-27 00:40:48,096 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-07-27 00:40:48,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:48,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:48,561 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-07-27 00:40:48,563 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-07-27 00:40:48,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:48,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:48,995 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-07-27 00:40:48,997 [ scc.config] DEBUG Found submodule.scripts.url
2025-07-27 00:40:49,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-07-27 00:40:49,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-07-27 00:40:49,433 [ scc.config] DEBUG Found submodule.scripts.branch
2025-07-27 00:40:49,433 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-07-27 00:40:49,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9ea07049d0> has local changes
2025-07-27 00:40:49,523 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 638 Rdornier 'Fix arrow opacity' (user: Rdornier)
- PR 637 Rdornier 'Fix scalebar position' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..3e8fa730
Previously merged:
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#489 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/489/)'
2025-07-27 00:40:49,536 [ scc.git] DEBUG [detached HEAD d912fa0] merge master -Dorg -Ssuccess-only
2025-07-27 00:40:49,536 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-07-27 00:40:49,536 [ scc.merge] INFO Repository: ome/omero-plugins
2025-07-27 00:40:49,536 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,536 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-07-27 00:40:49,537 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-07-27 00:40:49,537 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-07-27 00:40:49,537 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-07-27 00:40:49,537 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-07-27 00:40:49,537 [ scc.merge] INFO
2025-07-27 00:40:49,537 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-07-27 00:40:49,537 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-07-27 00:40:49,537 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-07-27 00:40:49,537 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-07-27 00:40:49,537 [ scc.merge] INFO Previously merged:
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:40:49,538 [ scc.merge] INFO
2025-07-27 00:40:49,538 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-07-27 00:40:49,538 [ scc.merge] INFO
2025-07-27 00:40:49,538 [ scc.merge] INFO Repository: ome/omero-figure
2025-07-27 00:40:49,538 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' (user: Rdornier)
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' (user: Rdornier)
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-07-27 00:40:49,538 [ scc.merge] INFO Updating 9cc36cde..3e8fa730
2025-07-27 00:40:49,538 [ scc.merge] INFO Previously merged:
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:40:49,538 [ scc.merge] INFO
2025-07-27 00:40:49,538 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-07-27 00:40:49,538 [ scc.merge] INFO
2025-07-27 00:40:49,538 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-07-27 00:40:49,538 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-07-27 00:40:49,538 [ scc.merge] INFO
2025-07-27 00:40:49,538 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-07-27 00:40:49,538 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,538 [ scc.merge] INFO
2025-07-27 00:40:49,538 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Repository: ome/omero-gallery
2025-07-27 00:40:49,539 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-07-27 00:40:49,539 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-07-27 00:40:49,539 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-07-27 00:40:49,539 [ scc.merge] INFO Previously merged:
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,539 [ scc.merge] INFO Repository: ome/omero-mapr
2025-07-27 00:40:49,539 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,539 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-07-27 00:40:49,539 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,539 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Repository: ome/omero-metadata
2025-07-27 00:40:49,540 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-07-27 00:40:49,540 [ scc.merge] INFO Previously merged:
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Repository: ome/omero-parade
2025-07-27 00:40:49,540 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-07-27 00:40:49,540 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-07-27 00:40:49,540 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Repository: ome/omero-rois
2025-07-27 00:40:49,540 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' (user: jo-mueller)
2025-07-27 00:40:49,540 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-07-27 00:40:49,540 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,540 [ scc.merge] INFO Repository: ome/omero-signup
2025-07-27 00:40:49,540 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,540 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-07-27 00:40:49,541 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-07-27 00:40:49,541 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Repository: ome/omero-upload
2025-07-27 00:40:49,541 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-07-27 00:40:49,541 [ scc.merge] INFO Updating deab817..160d894
2025-07-27 00:40:49,541 [ scc.merge] INFO Previously merged:
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-07-27 00:40:49,541 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-07-27 00:40:49,541 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,541 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-07-27 00:40:49,541 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,541 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-07-27 00:40:49,541 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,541 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-07-27 00:40:49,542 [ scc.merge] INFO Already up to date.
2025-07-27 00:40:49,542 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-07-27 00:40:49,542 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] INFO Repository: ome/scripts
2025-07-27 00:40:49,542 [ scc.merge] INFO Excluded PRs:
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-07-27 00:40:49,542 [ scc.merge] INFO Updating 4b4c755..573db34
2025-07-27 00:40:49,542 [ scc.merge] INFO Previously merged:
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-07-27 00:40:49,542 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] INFO Merged PRs:
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-07-27 00:40:49,542 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] INFO Conflicting PRs (not included):
2025-07-27 00:40:49,542 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-07-27 00:40:49,542 [ scc.merge] INFO
2025-07-27 00:40:49,542 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-07-27 00:40:49,542 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-07-27 00:40:49,544 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-07-27 00:40:49,547 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-07-27 00:40:49,549 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-07-27 00:40:49,551 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-07-27 00:40:49,553 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-07-27 00:40:49,556 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-07-27 00:40:49,558 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-07-27 00:40:49,560 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-07-27 00:40:49,562 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-07-27 00:40:49,564 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-07-27 00:40:49,567 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-07-27 00:40:49,569 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-07-27 00:40:49,571 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-07-27 00:40:49,573 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-07-27 00:40:49,575 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-07-27 00:40:49,578 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-07-27 00:40:49,580 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-07-27 00:40:49,582 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-07-27 00:40:49,584 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-07-27 00:40:49,586 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-07-27 00:40:49,589 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-07-27 00:40:49,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-07-27 00:40:49,591 [ scc.git] DEBUG Calling 'git remote'
2025-07-27 00:40:49,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 9abac1c] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD cf2cb30] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-07-27 00:41:37,843 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-07-27 00:41:47,939 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-07-27 00:41:50,488 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-07-27 00:41:55,365 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-07-27 00:42:36,268 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS