Started by upstream project "Trigger" build number 648
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 572
[Pipeline] sh
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-46.0.2-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.10.5-py3-none-any.whl (163 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.23-py3-none-any.whl (118 kB)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.10.5 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.2 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-10-10 00:39:40,194 [ scc.config] DEBUG Found github.token
2025-10-10 00:39:40,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-10 00:39:40,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:40,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:41,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-10 00:39:41,142 [ scc.gh] DEBUG 3988 remaining from 5000 (Reset at 00:10
2025-10-10 00:39:41,143 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:39:41,145 [ scc.git] DEBUG Check current status
2025-10-10 00:39:41,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:39:41,147 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-10 00:39:41,147 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:39:41,192 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-10 00:39:41,195 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-10 00:39:41,198 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-10 00:39:41,201 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-10 00:39:41,205 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-10-10 00:39:41,208 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-10 00:39:41,211 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-10 00:39:41,214 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-10-10 00:39:41,217 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-10 00:39:41,220 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-10 00:39:41,223 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-10 00:39:41,225 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-10 00:39:41,228 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-10 00:39:41,231 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-10 00:39:41,234 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-10 00:39:41,237 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-10 00:39:41,239 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-10 00:39:41,242 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-10 00:39:41,244 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-10 00:39:41,247 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-10 00:39:41,250 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-10 00:39:41,253 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-10-10 00:39:41,256 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:39:41,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-10-10 00:39:42,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:39:42,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:39:42,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:39:43,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:39:43,372 [ scc.git] DEBUG Resetting...
2025-10-10 00:39:43,372 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-10 00:39:43,378 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-10 00:39:43,378 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-10 00:39:43,472 [ scc.git] DEBUG Check current status
2025-10-10 00:39:43,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:39:43,474 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-10 00:39:43,474 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:39:43,516 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-10 00:39:43,519 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-10 00:39:43,522 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-10 00:39:43,525 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-10 00:39:43,529 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-10-10 00:39:43,531 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-10 00:39:43,534 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-10 00:39:43,537 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-10-10 00:39:43,540 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-10 00:39:43,543 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-10 00:39:43,546 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-10 00:39:43,548 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-10 00:39:43,551 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-10 00:39:43,554 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-10 00:39:43,557 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-10 00:39:43,560 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-10 00:39:43,562 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-10 00:39:43,564 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-10 00:39:43,567 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-10 00:39:43,570 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-10 00:39:43,572 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-10 00:39:43,576 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-10-10 00:39:43,576 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-10-10 00:39:43,577 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-10-10 00:39:43,577 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-10-10 00:39:43,577 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-10-10 00:39:43,577 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-10-10 00:39:43,577 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:39:43,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-10-10 00:39:44,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-10-10 00:39:44,438 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:39:44,438 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-10 00:39:44,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-10-10 00:39:44,941 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:39:44,941 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-10 00:39:45,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-10-10 00:39:45,446 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:39:45,446 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-10 00:39:45,446 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:39:45,446 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:39:45,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:39:45,449 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:39:45,451 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:39:45,451 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:39:45,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:39:45,456 [ scc.git] DEBUG Already up to date.
2025-10-10 00:39:45,456 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-10-10 00:39:45,745 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-10 00:39:45,745 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-10-10 00:39:45,751 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-10-10 00:39:46,154 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-10 00:39:46,154 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-10-10 00:39:46,160 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-10-10 00:39:46,446 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-10 00:39:46,446 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-10-10 00:39:46,452 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:39:46,452 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:39:46,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:39:46,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-10 00:39:46,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:39:46,458 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-10 00:39:46,471 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:39:46,473 [ scc.git] DEBUG scripts | 2 +-
2025-10-10 00:39:46,473 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:39:46,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:46,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-10 00:39:46,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:39:46,627 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-10 00:39:46,639 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:39:46,642 [ scc.git] DEBUG omero-figure | 2 +-
2025-10-10 00:39:46,642 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:39:47,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:47,030 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-10 00:39:47,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:39:47,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-10 00:39:47,046 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:39:47,049 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-10-10 00:39:47,049 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:39:47,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:47,434 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:39:47,490 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-10-10 00:39:47,514 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-10-10 00:39:47,527 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-10-10 00:39:47,528 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:39:47,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:39:47,530 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:39:47,602 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8550f33610> has no local changes
2025-10-10 00:39:47,602 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:39:47,667 [ scc.git] DEBUG [detached HEAD fda4496] merge master -Dorg -Snone
2025-10-10 00:39:47,668 [ scc.merge] INFO Repository: ome/omero-plugins
2025-10-10 00:39:47,668 [ scc.merge] INFO Already up to date.
2025-10-10 00:39:47,668 [ scc.merge] INFO
2025-10-10 00:39:47,668 [ scc.merge] INFO Merged PRs:
2025-10-10 00:39:47,668 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-10 00:39:47,668 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-10 00:39:47,668 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-10 00:39:47,668 [ scc.merge] INFO
2025-10-10 00:39:47,668 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-10 00:39:47,668 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b'
Submodule path 'omero-figure': checked out 'baab5c06714c374450f7312b1563a593bde691c3'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15'
Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-10-10 00:39:54,781 [ scc.config] DEBUG Found github.token
2025-10-10 00:39:54,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-10 00:39:54,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:55,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:39:55,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-10 00:39:55,776 [ scc.gh] DEBUG 3974 remaining from 5000 (Reset at 00:10
2025-10-10 00:39:55,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:39:55,779 [ scc.git] DEBUG Check current status
2025-10-10 00:39:55,779 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:39:55,781 [ scc.git] DEBUG fda4496 merge master -Dorg -Snone
2025-10-10 00:39:55,781 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:39:55,825 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-10 00:39:55,828 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-10 00:39:55,831 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-10 00:39:55,834 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700)
2025-10-10 00:39:55,841 [ scc.git] DEBUG +baab5c06714c374450f7312b1563a593bde691c3 omero-figure (v7.2.1-106-gbaab5c06)
2025-10-10 00:39:55,843 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-10 00:39:55,846 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-10 00:39:55,850 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-10-10 00:39:55,853 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-10 00:39:55,855 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-10-10 00:39:55,858 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-10 00:39:55,861 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-10 00:39:55,864 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-10 00:39:55,867 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-10 00:39:55,870 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-10 00:39:55,873 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-10 00:39:55,875 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-10-10 00:39:55,878 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207)
2025-10-10 00:39:55,881 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-10 00:39:55,883 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-10 00:39:55,886 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-10 00:39:55,889 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116)
2025-10-10 00:39:55,892 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:39:55,892 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-10-10 00:39:55,894 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-10-10 00:39:56,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-10-10 00:39:56,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:39:57,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:39:57,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:39:57,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:39:57,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:39:58,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-10 00:39:58,045 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:39:58,047 [ scc.git] DEBUG Check current status
2025-10-10 00:39:58,047 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:39:58,049 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-10-10 00:39:58,049 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:39:58,086 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:39:58,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-10-10 00:39:58,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:39:59,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:39:59,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:00,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:00,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:00,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:00,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-10 00:40:00,185 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:00,187 [ scc.git] DEBUG Check current status
2025-10-10 00:40:00,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:00,189 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-10-10 00:40:00,189 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:00,226 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:00,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-10-10 00:40:01,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:01,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:01,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:02,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:02,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:02,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:02,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-10 00:40:02,388 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:02,390 [ scc.git] DEBUG Check current status
2025-10-10 00:40:02,390 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:02,392 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-10-10 00:40:02,392 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:02,430 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:02,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-10-10 00:40:03,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:03,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:04,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:04,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:04,589 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:04,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:04,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-10 00:40:04,627 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:04,629 [ scc.git] DEBUG Check current status
2025-10-10 00:40:04,629 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:04,632 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0
2025-10-10 00:40:04,632 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:04,668 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:05,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-10-10 00:40:05,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:06,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:06,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:07,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:07,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:07,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:07,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-10 00:40:07,090 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:07,092 [ scc.git] DEBUG Check current status
2025-10-10 00:40:07,093 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:07,095 [ scc.git] DEBUG baab5c06 Merge pull request #612 from will-moore/script_version
2025-10-10 00:40:07,095 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:07,132 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:07,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-10-10 00:40:08,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:08,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:08,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:09,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:09,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:09,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:09,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-10 00:40:09,326 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:09,328 [ scc.git] DEBUG Check current status
2025-10-10 00:40:09,328 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:09,330 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-10-10 00:40:09,330 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:09,368 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:09,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-10-10 00:40:10,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:10,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:11,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:11,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:11,525 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:11,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:11,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-10 00:40:11,562 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:11,564 [ scc.git] DEBUG Check current status
2025-10-10 00:40:11,564 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:11,566 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-10-10 00:40:11,566 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:11,604 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:12,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-10-10 00:40:12,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:13,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:13,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:13,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:13,855 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:13,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:13,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-10 00:40:13,892 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:13,894 [ scc.git] DEBUG Check current status
2025-10-10 00:40:13,894 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:13,896 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-10-10 00:40:13,896 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:13,934 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:14,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-10-10 00:40:14,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:15,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:15,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:16,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:16,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:16,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:16,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-10 00:40:16,341 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:16,343 [ scc.git] DEBUG Check current status
2025-10-10 00:40:16,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:16,345 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-10-10 00:40:16,345 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:16,383 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:16,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-10-10 00:40:17,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:17,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:18,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:18,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:18,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:18,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:18,597 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-10 00:40:18,597 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:18,599 [ scc.git] DEBUG Check current status
2025-10-10 00:40:18,599 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:18,602 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-10 00:40:18,602 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:18,639 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:19,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-10-10 00:40:19,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:20,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:20,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:20,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:20,946 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:20,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:20,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-10 00:40:20,985 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:20,987 [ scc.git] DEBUG Check current status
2025-10-10 00:40:20,987 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:20,989 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-10-10 00:40:20,989 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:21,026 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:21,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-10-10 00:40:21,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:22,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:22,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:23,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:23,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:23,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:23,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-10 00:40:23,245 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:23,247 [ scc.git] DEBUG Check current status
2025-10-10 00:40:23,247 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:23,249 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-10-10 00:40:23,249 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:23,286 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:23,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-10-10 00:40:24,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:24,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:25,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:25,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:25,503 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:25,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:25,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-10 00:40:25,541 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:25,543 [ scc.git] DEBUG Check current status
2025-10-10 00:40:25,543 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:25,545 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-10-10 00:40:25,545 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:25,583 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:26,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-10-10 00:40:26,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:26,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:27,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:27,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:27,790 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:27,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:27,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-10 00:40:27,828 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:27,830 [ scc.git] DEBUG Check current status
2025-10-10 00:40:27,830 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:27,832 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-10-10 00:40:27,832 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:27,869 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-10-10 00:40:28,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:29,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:29,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:29,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:29,976 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:30,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:30,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-10 00:40:30,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:30,017 [ scc.git] DEBUG Check current status
2025-10-10 00:40:30,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:30,019 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2025-10-10 00:40:30,019 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:30,057 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:30,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-10 00:40:30,412 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-10 00:40:30,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-10-10 00:40:31,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:31,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:31,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:32,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:32,375 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:32,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:32,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-10 00:40:32,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:32,413 [ scc.git] DEBUG Check current status
2025-10-10 00:40:32,413 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:32,416 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-10-10 00:40:32,416 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:32,454 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:32,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-10-10 00:40:33,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:33,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:34,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:34,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:34,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:34,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:34,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-10 00:40:34,653 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:34,655 [ scc.git] DEBUG Check current status
2025-10-10 00:40:34,655 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:34,657 [ scc.git] DEBUG 160d894 Fix display of code
2025-10-10 00:40:34,657 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:34,695 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:35,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-10-10 00:40:35,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:36,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:36,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:36,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:36,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:36,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:36,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-10 00:40:36,970 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:36,972 [ scc.git] DEBUG Check current status
2025-10-10 00:40:36,972 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:36,974 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-10-10 00:40:36,974 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:37,011 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:37,011 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-10-10 00:40:37,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-10-10 00:40:37,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:38,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:38,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:39,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:39,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:39,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:39,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-10 00:40:39,266 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:39,267 [ scc.git] DEBUG Check current status
2025-10-10 00:40:39,268 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:39,270 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-10-10 00:40:39,270 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:39,308 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:39,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-10 00:40:39,650 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-10 00:40:39,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-10-10 00:40:40,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:40,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:41,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:41,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:41,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:41,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:41,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-10 00:40:41,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:41,708 [ scc.git] DEBUG Check current status
2025-10-10 00:40:41,708 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:41,710 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-10-10 00:40:41,710 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:41,748 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:42,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-10 00:40:42,102 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-10 00:40:42,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-10-10 00:40:42,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:43,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:43,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:44,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:44,123 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:44,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:44,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-10 00:40:44,160 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:44,162 [ scc.git] DEBUG Check current status
2025-10-10 00:40:44,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:44,164 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-10-10 00:40:44,164 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:44,202 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:44,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-10-10 00:40:45,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:45,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:45,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:46,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:46,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:46,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:46,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-10 00:40:46,405 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-10 00:40:46,407 [ scc.git] DEBUG Check current status
2025-10-10 00:40:46,407 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:46,409 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-10-10 00:40:46,410 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:46,447 [ scc.config] DEBUG Found remote.origin.url
2025-10-10 00:40:46,447 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-10-10 00:40:46,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-10 00:40:46,789 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-10 00:40:47,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-10-10 00:40:47,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-10 00:40:47,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-10 00:40:48,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-10 00:40:48,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-10 00:40:48,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:48,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:48,865 [ scc.git] DEBUG Resetting...
2025-10-10 00:40:48,865 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-10 00:40:48,871 [ scc.git] DEBUG HEAD is now at fda4496 merge master -Dorg -Snone
2025-10-10 00:40:48,871 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-10 00:40:48,928 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-10-10 00:40:48,950 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-10-10 00:40:48,971 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-10-10 00:40:48,985 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-10-10 00:40:49,011 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-10-10 00:40:49,022 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-10-10 00:40:49,044 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-10-10 00:40:49,047 [ scc.git] DEBUG Check current status
2025-10-10 00:40:49,047 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-10 00:40:49,049 [ scc.git] DEBUG fda4496 merge master -Dorg -Snone
2025-10-10 00:40:49,049 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-10 00:40:49,091 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-10 00:40:49,093 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-10 00:40:49,096 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-10 00:40:49,100 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-10 00:40:49,104 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-10-10 00:40:49,106 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-10 00:40:49,109 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-10 00:40:49,113 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-10-10 00:40:49,115 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-10 00:40:49,118 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-10 00:40:49,121 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-10 00:40:49,123 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-10 00:40:49,127 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-10 00:40:49,129 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-10 00:40:49,132 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-10 00:40:49,135 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-10 00:40:49,137 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-10 00:40:49,140 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-10 00:40:49,142 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-10 00:40:49,145 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-10 00:40:49,147 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-10 00:40:49,150 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-10-10 00:40:49,151 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-10-10 00:40:49,151 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-10-10 00:40:49,151 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-10-10 00:40:49,151 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-10-10 00:40:49,151 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-10-10 00:40:49,151 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-10-10 00:40:49,151 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:40:49,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-10-10 00:40:49,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-10-10 00:40:49,924 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:40:50,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-10-10 00:40:50,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:40:51,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-10-10 00:40:51,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:40:51,826 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-10 00:40:52,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-10-10 00:40:52,343 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:40:52,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-10-10 00:40:53,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:40:53,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-10-10 00:40:54,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:40:54,287 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-10 00:40:54,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-10-10 00:40:54,793 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:40:55,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-10-10 00:40:55,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:40:56,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-10-10 00:40:56,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:40:56,691 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-10 00:40:56,691 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:40:56,691 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:40:56,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:56,693 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:40:56,695 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:40:56,695 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:40:56,698 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:40:56,701 [ scc.git] DEBUG Already up to date.
2025-10-10 00:40:56,701 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-10-10 00:40:57,005 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-10 00:40:57,005 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-10-10 00:40:57,010 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-10-10 00:40:57,284 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-10 00:40:57,284 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-10-10 00:40:57,290 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-10-10 00:40:57,574 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-10 00:40:57,574 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-10-10 00:40:57,580 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:40:57,580 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:40:57,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:57,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-10 00:40:57,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:57,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-10 00:40:57,589 [ scc.git] DEBUG Already up to date.
2025-10-10 00:40:57,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:40:57,727 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-10 00:40:57,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:57,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-10 00:40:57,734 [ scc.git] DEBUG Already up to date.
2025-10-10 00:40:58,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:40:58,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-10 00:40:58,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:58,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-10 00:40:58,143 [ scc.git] DEBUG Already up to date.
2025-10-10 00:40:58,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:40:58,526 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:40:58,573 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:40:58,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:58,575 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:40:58,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-10-10 00:40:58,957 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:40:58,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-10 00:40:58,957 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:40:58,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:58,960 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:40:58,962 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:40:58,962 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:40:58,965 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:40:58,967 [ scc.git] DEBUG Already up to date.
2025-10-10 00:40:58,968 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:40:58,968 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:40:58,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:58,969 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:40:59,006 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:40:59,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:40:59,008 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:40:59,043 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:40:59,046 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de26d0810> has no local changes
2025-10-10 00:40:59,046 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:40:59,051 [ scc.git] DEBUG [detached HEAD 16a3953] merge master -Dorg -Ssuccess-only
2025-10-10 00:40:59,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:40:59,051 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:40:59,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-10-10 00:41:00,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2025-10-10 00:41:00,102 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:41:00,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-10-10 00:41:01,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:01,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:02,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-10-10 00:41:02,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:41:02,894 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:41:03,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-10-10 00:41:03,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-10-10 00:41:03,891 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:41:03,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-10 00:41:03,891 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:03,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:03,894 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:41:03,896 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:41:03,896 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:41:03,899 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:41:03,902 [ scc.git] DEBUG Already up to date.
2025-10-10 00:41:03,902 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2025-10-10 00:41:04,181 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2025-10-10 00:41:04,181 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2025-10-10 00:41:04,185 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:41:04,185 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:04,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:04,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-10-10 00:41:04,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:04,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-10-10 00:41:04,199 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:41:04,201 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:41:04,202 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:41:04,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:04,342 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:41:04,378 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:04,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:04,381 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:41:04,417 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:41:04,420 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de2c3bc90> has no local changes
2025-10-10 00:41:04,420 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:41:04,425 [ scc.git] DEBUG [detached HEAD d1e5bdf] merge master -Dorg -Ssuccess-only
2025-10-10 00:41:04,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:41:04,426 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:41:04,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-10-10 00:41:05,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None
2025-10-10 00:41:05,392 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:41:05,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-10-10 00:41:06,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:07,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:07,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-10-10 00:41:08,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:41:08,069 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:41:08,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-10-10 00:41:09,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-10-10 00:41:09,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:09,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-10-10 00:41:10,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:41:10,381 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-10-10 00:41:10,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-10-10 00:41:11,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-10-10 00:41:11,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-10-10 00:41:12,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:13,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:13,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-10-10 00:41:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:41:13,902 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-10-10 00:41:14,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-10-10 00:41:14,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-10-10 00:41:15,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-10-10 00:41:15,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:16,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:16,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-10-10 00:41:17,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:41:17,238 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-10-10 00:41:17,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-10-10 00:41:18,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-10-10 00:41:18,222 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:41:18,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-10 00:41:18,222 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:18,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:18,224 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:41:18,226 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:41:18,226 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:41:18,229 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:41:18,231 [ scc.git] DEBUG Already up to date.
2025-10-10 00:41:18,231 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-10-10 00:41:18,537 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-10 00:41:18,537 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-10-10 00:41:18,541 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-10-10 00:41:18,825 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-10 00:41:18,825 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-10-10 00:41:18,828 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-10-10 00:41:19,110 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-10 00:41:19,110 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-10-10 00:41:19,113 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head'
2025-10-10 00:41:19,409 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-10 00:41:19,409 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD
2025-10-10 00:41:19,413 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:41:19,413 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:19,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:19,415 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-10-10 00:41:19,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:19,420 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-10-10 00:41:19,427 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:41:19,430 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-10-10 00:41:19,430 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-10-10 00:41:19,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:19,591 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-10-10 00:41:19,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:19,596 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-10-10 00:41:19,604 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-10-10 00:41:19,605 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:41:19,608 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-10-10 00:41:19,608 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-10-10 00:41:19,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:19,983 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-10-10 00:41:19,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:19,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-10-10 00:41:19,996 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-10-10 00:41:19,997 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:41:20,000 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-10-10 00:41:20,000 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-10-10 00:41:20,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:20,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-10-10 00:41:20,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:20,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-10-10 00:41:20,378 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:41:20,381 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:41:20,381 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:41:20,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:20,772 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:41:20,809 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:20,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:20,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:41:20,846 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:41:20,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de274c910> has no local changes
2025-10-10 00:41:20,849 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:41:20,855 [ scc.git] DEBUG [detached HEAD 10e19a7] merge master -Dorg -Ssuccess-only
2025-10-10 00:41:20,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:41:20,855 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:41:21,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-10-10 00:41:21,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2025-10-10 00:41:22,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None
2025-10-10 00:41:22,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-10 00:41:23,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:23,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:24,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-10 00:41:24,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:25,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-10 00:41:25,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None
2025-10-10 00:41:25,993 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-10-10 00:41:26,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2025-10-10 00:41:26,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None
2025-10-10 00:41:27,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-10 00:41:27,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:28,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:28,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-10 00:41:29,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:29,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-10 00:41:30,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None
2025-10-10 00:41:30,407 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import'
2025-10-10 00:41:30,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-10-10 00:41:31,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2025-10-10 00:41:31,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-10 00:41:32,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:32,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:33,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-10 00:41:33,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:34,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-10 00:41:34,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-10-10 00:41:34,654 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-10-10 00:41:35,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-10-10 00:41:35,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-10-10 00:41:36,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-10 00:41:36,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:37,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:37,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-10 00:41:38,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:38,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-10 00:41:39,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None
2025-10-10 00:41:39,009 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells'
2025-10-10 00:41:39,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-10-10 00:41:40,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-10-10 00:41:40,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b HTTP/1.1" 200 None
2025-10-10 00:41:41,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:41,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:41:42,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b HTTP/1.1" 200 None
2025-10-10 00:41:42,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/0f9cb71c2f2c546fc096a4f824d0164b1014e28b?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:42,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b HTTP/1.1" 200 None
2025-10-10 00:41:43,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/0f9cb71c2f2c546fc096a4f824d0164b1014e28b/status HTTP/1.1" 200 None
2025-10-10 00:41:43,381 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2025-10-10 00:41:43,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-10-10 00:41:44,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-10-10 00:41:44,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-10-10 00:41:45,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-10-10 00:41:45,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-10-10 00:41:46,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-10-10 00:41:46,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-10-10 00:41:47,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-10-10 00:41:47,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-10-10 00:41:47,901 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:41:47,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-10 00:41:47,901 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:47,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:47,903 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:41:47,906 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:41:47,906 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:41:47,909 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:41:47,921 [ scc.git] DEBUG Updating 11d3587..37ea700
2025-10-10 00:41:48,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2025-10-10 00:41:49,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-10-10 00:41:49,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-10-10 00:41:50,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-10-10 00:41:51,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-10-10 00:41:51,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-10-10 00:41:52,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-10-10 00:41:53,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-10-10 00:41:53,161 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head'
2025-10-10 00:41:53,457 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-10 00:41:53,457 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD
2025-10-10 00:41:53,461 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head'
2025-10-10 00:41:53,758 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-10 00:41:53,758 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD
2025-10-10 00:41:53,762 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-10-10 00:41:54,035 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-10 00:41:54,035 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-10-10 00:41:54,039 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head'
2025-10-10 00:41:54,317 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-10 00:41:54,317 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD
2025-10-10 00:41:54,321 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2025-10-10 00:41:54,605 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-10 00:41:54,606 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2025-10-10 00:41:54,610 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:41:54,610 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:54,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:54,612 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f9cb71c2f2c546fc096a4f824d0164b1014e28b'
2025-10-10 00:41:54,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:54,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 0f9cb71c2f2c546fc096a4f824d0164b1014e28b'
2025-10-10 00:41:54,626 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:41:54,630 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +-
2025-10-10 00:41:54,630 [ scc.git] DEBUG .isort.cfg | 2 +-
2025-10-10 00:41:54,630 [ scc.git] DEBUG README.rst | 5 +-
2025-10-10 00:41:54,630 [ scc.git] DEBUG setup.py | 5 +-
2025-10-10 00:41:54,630 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 --
2025-10-10 00:41:54,630 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++-
2025-10-10 00:41:54,630 [ scc.git] DEBUG src/omero_zarr/masks.py | 21 ++++---
2025-10-10 00:41:54,630 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 92 ++++++++++++++++++---------
2025-10-10 00:41:54,630 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++--
2025-10-10 00:41:54,630 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++----------
2025-10-10 00:41:54,630 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++-----
2025-10-10 00:41:54,630 [ scc.git] DEBUG 11 files changed, 224 insertions(+), 108 deletions(-)
2025-10-10 00:41:54,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:54,783 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-10 00:41:54,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:54,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-10 00:41:54,801 [ scc.git] DEBUG Auto-merging README.rst
2025-10-10 00:41:54,801 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-10-10 00:41:54,801 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:41:54,801 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:41:54,804 [ scc.git] DEBUG Calling 'git reset --hard 7362bf5191eeb0120cc75270a1dce456c9268695'
2025-10-10 00:41:54,808 [ scc.git] DEBUG HEAD is now at 7362bf5 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-10 00:41:55,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:55,170 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-10 00:41:55,173 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-10 00:41:55,175 [ scc.git] INFO - PR 174 will-moore 'Skip wells'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/util.py
- src/omero_zarr/masks.py
- src/omero_zarr/cli.py
- src/omero_zarr/raw_pixels.py
- test/integration/clitest/test_export.py
--conflicts
2025-10-10 00:41:55,177 [ scc.config] DEBUG Found github.token
2025-10-10 00:41:55,177 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts.
2025-10-10 00:41:55,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-10 00:41:55,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:55,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-10 00:41:55,191 [ scc.git] DEBUG Auto-merging CHANGELOG.md
2025-10-10 00:41:55,191 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md
2025-10-10 00:41:55,191 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-10-10 00:41:55,191 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-10-10 00:41:55,191 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-10-10 00:41:55,191 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:41:55,192 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:41:55,194 [ scc.git] DEBUG Calling 'git reset --hard 7362bf5191eeb0120cc75270a1dce456c9268695'
2025-10-10 00:41:55,198 [ scc.git] DEBUG HEAD is now at 7362bf5 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-10 00:41:55,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:55,573 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-10 00:41:55,576 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-10 00:41:55,579 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- test/integration/clitest/test_export.py
- PR #174 will-moore 'Skip wells'
- test/integration/clitest/test_export.py
- Upstream changes
- CHANGELOG.md
--conflicts
2025-10-10 00:41:55,580 [ scc.config] DEBUG Found github.token
2025-10-10 00:41:55,580 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2025-10-10 00:41:55,581 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-10 00:41:55,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:55,585 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-10 00:41:55,594 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-10-10 00:41:55,594 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-10-10 00:41:55,594 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2025-10-10 00:41:55,595 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:41:55,595 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:41:55,598 [ scc.git] DEBUG Calling 'git reset --hard 7362bf5191eeb0120cc75270a1dce456c9268695'
2025-10-10 00:41:55,601 [ scc.git] DEBUG HEAD is now at 7362bf5 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-10 00:41:56,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:56,002 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-10 00:41:56,005 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-10 00:41:56,007 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/zarr_import.py
--conflicts
2025-10-10 00:41:56,009 [ scc.config] DEBUG Found github.token
2025-10-10 00:41:56,009 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts.
2025-10-10 00:41:56,009 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-10 00:41:56,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:56,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-10 00:41:56,022 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-10-10 00:41:56,022 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2025-10-10 00:41:56,022 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:41:56,022 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:41:56,024 [ scc.git] DEBUG Calling 'git reset --hard 7362bf5191eeb0120cc75270a1dce456c9268695'
2025-10-10 00:41:56,027 [ scc.git] DEBUG HEAD is now at 7362bf5 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-10 00:41:56,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:41:56,391 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-10 00:41:56,394 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-10 00:41:56,396 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/zarr_import.py
- PR #181 will-moore 'Add labels support for import'
- src/omero_zarr/zarr_import.py
--conflicts
2025-10-10 00:41:56,398 [ scc.config] DEBUG Found github.token
2025-10-10 00:41:56,398 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts.
2025-10-10 00:41:56,398 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:41:56,433 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:41:56,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:41:56,435 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:41:56,469 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:41:56,472 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de271c110> has no local changes
2025-10-10 00:41:56,472 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:41:56,478 [ scc.git] DEBUG [detached HEAD 9aec747] merge master -Dorg -Ssuccess-only
2025-10-10 00:41:56,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:41:56,478 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:41:56,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-10-10 00:41:57,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None
2025-10-10 00:41:57,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None
2025-10-10 00:41:57,841 [ scc.repo] DEBUG # ... Include label: include
2025-10-10 00:41:58,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None
2025-10-10 00:41:58,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:41:59,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None
2025-10-10 00:41:59,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/deca0590336231198ee955604cc63b333149f7a9?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:41:59,700 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling'
2025-10-10 00:42:00,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642 HTTP/1.1" 200 None
2025-10-10 00:42:00,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642/comments HTTP/1.1" 200 None
2025-10-10 00:42:00,637 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:01,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db HTTP/1.1" 200 None
2025-10-10 00:42:01,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:02,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:02,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2660dd0f37e2657b4eb48878e9873c7566a8c2db HTTP/1.1" 200 None
2025-10-10 00:42:03,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2660dd0f37e2657b4eb48878e9873c7566a8c2db?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:03,147 [ scc.repo] DEBUG - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
2025-10-10 00:42:03,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-10-10 00:42:04,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-10-10 00:42:04,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-10-10 00:42:05,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-10-10 00:42:05,335 [ scc.repo] DEBUG # ... Include label: include
2025-10-10 00:42:05,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None
2025-10-10 00:42:06,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:06,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None
2025-10-10 00:42:07,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/31d53f83f21d60e0a6d262403f47be360df7fd04?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:07,245 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-10-10 00:42:07,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-10-10 00:42:08,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-10-10 00:42:08,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-10-10 00:42:09,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-10-10 00:42:09,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:10,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:10,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-10-10 00:42:11,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:11,206 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-10-10 00:42:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-10-10 00:42:12,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-10-10 00:42:12,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None
2025-10-10 00:42:12,712 [ scc.repo] DEBUG # ... Include label: include
2025-10-10 00:42:13,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f HTTP/1.1" 200 None
2025-10-10 00:42:13,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:14,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea413e362d546a9fffcf8b23cca93a1b42173d6f HTTP/1.1" 200 None
2025-10-10 00:42:14,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea413e362d546a9fffcf8b23cca93a1b42173d6f?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:14,701 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-10-10 00:42:14,702 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:42:14,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-10 00:42:14,702 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:14,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:14,705 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:42:14,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:42:14,707 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:42:14,711 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:42:14,733 [ scc.git] DEBUG Updating 9cc36cde..baab5c06
2025-10-10 00:42:15,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None
2025-10-10 00:42:16,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None
2025-10-10 00:42:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None
2025-10-10 00:42:17,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2025-10-10 00:42:18,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-10-10 00:42:18,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-10-10 00:42:19,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-10-10 00:42:20,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-10-10 00:42:20,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-10-10 00:42:20,945 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-10-10 00:42:21,240 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-10 00:42:21,240 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-10-10 00:42:21,244 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-10-10 00:42:21,528 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-10 00:42:21,529 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-10-10 00:42:21,533 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-10-10 00:42:21,813 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-10 00:42:21,813 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-10-10 00:42:21,817 [ scc.git] DEBUG Calling 'git fetch origin pull/642/head'
2025-10-10 00:42:22,098 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-10 00:42:22,099 [ scc.git] DEBUG * branch refs/pull/642/head -> FETCH_HEAD
2025-10-10 00:42:22,103 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2025-10-10 00:42:22,386 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-10 00:42:22,386 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2025-10-10 00:42:22,390 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:42:22,390 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:22,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:22,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea413e362d546a9fffcf8b23cca93a1b42173d6f'
2025-10-10 00:42:22,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:22,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) ea413e362d546a9fffcf8b23cca93a1b42173d6f'
2025-10-10 00:42:22,427 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-10-10 00:42:22,427 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-10-10 00:42:22,427 [ scc.git] DEBUG Auto-merging src/index.html
2025-10-10 00:42:22,427 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:22,437 [ scc.git] DEBUG .gitignore | 2 +
2025-10-10 00:42:22,437 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/css/figure.css | 18 +-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/index.html | 44 +-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 210 +++++-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/js/shape_editor/line.js | 217 +++++-
2025-10-10 00:42:22,437 [ scc.git] DEBUG src/js/shape_editor/point.js | 205 +++++-
2025-10-10 00:42:22,438 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 209 +++++-
2025-10-10 00:42:22,438 [ scc.git] DEBUG src/js/shape_editor/rect.js | 214 +++++-
2025-10-10 00:42:22,438 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 +++++++++++-
2025-10-10 00:42:22,438 [ scc.git] DEBUG src/js/shape_editor/text.js | 763 +++++++++++++++++++++
2025-10-10 00:42:22,438 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/js/views/right_panel_view.js | 120 +++-
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 +++++-
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-10-10 00:42:22,439 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 ++++++++---
2025-10-10 00:42:22,439 [ scc.git] DEBUG 22 files changed, 3299 insertions(+), 235 deletions(-)
2025-10-10 00:42:22,439 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-10-10 00:42:22,439 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-10-10 00:42:22,439 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-10-10 00:42:22,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:22,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-10-10 00:42:22,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:22,590 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-10-10 00:42:22,608 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:22,611 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-10-10 00:42:22,611 [ scc.git] DEBUG README.rst | 4 +-
2025-10-10 00:42:22,612 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-10-10 00:42:22,612 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-10-10 00:42:22,612 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-10-10 00:42:22,612 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-10-10 00:42:23,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:23,055 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-10 00:42:23,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:23,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-10 00:42:23,088 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-10-10 00:42:23,088 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-10-10 00:42:23,088 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-10-10 00:42:23,088 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-10-10 00:42:23,088 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-10-10 00:42:23,088 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:42:23,089 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:42:23,093 [ scc.git] DEBUG Calling 'git reset --hard 08567db445c9d16757a9d67753e05df2fb30a307'
2025-10-10 00:42:23,099 [ scc.git] DEBUG HEAD is now at 08567db4 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst)
2025-10-10 00:42:23,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:23,449 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-10 00:42:23,453 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3'
2025-10-10 00:42:23,456 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-10-10 00:42:23,458 [ scc.config] DEBUG Found github.token
2025-10-10 00:42:23,458 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-10-10 00:42:23,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2660dd0f37e2657b4eb48878e9873c7566a8c2db'
2025-10-10 00:42:23,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:23,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 2660dd0f37e2657b4eb48878e9873c7566a8c2db'
2025-10-10 00:42:23,480 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:23,484 [ scc.git] DEBUG package-lock.json | 92 ++++++++++++++++++++++++++++++++++++++++++++++++++++---
2025-10-10 00:42:23,484 [ scc.git] DEBUG package.json | 2 +-
2025-10-10 00:42:23,484 [ scc.git] DEBUG 2 files changed, 88 insertions(+), 6 deletions(-)
2025-10-10 00:42:23,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:23,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...deca0590336231198ee955604cc63b333149f7a9'
2025-10-10 00:42:23,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:23,892 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) deca0590336231198ee955604cc63b333149f7a9'
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js
2025-10-10 00:42:23,914 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:42:23,914 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:42:23,919 [ scc.git] DEBUG Calling 'git reset --hard 50a4cf52f209d072a4072de913c4e5e66544861a'
2025-10-10 00:42:23,927 [ scc.git] DEBUG HEAD is now at 50a4cf52 merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6)
2025-10-10 00:42:24,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:24,273 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 deca0590336231198ee955604cc63b333149f7a9'
2025-10-10 00:42:24,278 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3'
2025-10-10 00:42:24,281 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/shape_editor/rect.js
- src/js/shape_editor/shape_manager.js
--conflicts
2025-10-10 00:42:24,283 [ scc.config] DEBUG Found github.token
2025-10-10 00:42:24,283 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts.
2025-10-10 00:42:24,283 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:42:24,319 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:24,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:24,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:42:24,356 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:42:24,362 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de265cd90> has no local changes
2025-10-10 00:42:24,362 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..baab5c06
Previously merged:
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:42:24,369 [ scc.git] DEBUG [detached HEAD fd895697] merge master -Dorg -Ssuccess-only
2025-10-10 00:42:24,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:42:24,370 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:42:24,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-10-10 00:42:25,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2025-10-10 00:42:25,262 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:25,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-10-10 00:42:26,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:26,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:27,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-10-10 00:42:27,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:27,950 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:42:28,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-10-10 00:42:28,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-10-10 00:42:29,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-10-10 00:42:29,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:30,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-10-10 00:42:30,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:30,881 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-10-10 00:42:30,881 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:42:30,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-10 00:42:30,881 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:30,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:30,883 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:42:30,885 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:42:30,885 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:42:30,888 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:42:30,890 [ scc.git] DEBUG Already up to date.
2025-10-10 00:42:30,890 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-10-10 00:42:31,180 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-10-10 00:42:31,180 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-10-10 00:42:31,184 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2025-10-10 00:42:31,466 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-10-10 00:42:31,466 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2025-10-10 00:42:31,469 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:42:31,470 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:31,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:31,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-10-10 00:42:31,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:31,477 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-10-10 00:42:31,483 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-10-10 00:42:31,484 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:31,486 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-10-10 00:42:31,486 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-10-10 00:42:31,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:31,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-10-10 00:42:31,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:31,642 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-10-10 00:42:31,649 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:31,652 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:42:31,652 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:42:32,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:32,039 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:42:32,075 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:32,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:32,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:42:32,113 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:42:32,116 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de2783010> has no local changes
2025-10-10 00:42:32,116 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:42:32,121 [ scc.git] DEBUG [detached HEAD e4610b9] merge master -Dorg -Ssuccess-only
2025-10-10 00:42:32,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:42:32,121 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:42:32,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-10-10 00:42:33,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-10-10 00:42:33,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-10-10 00:42:34,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-10-10 00:42:34,248 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:34,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-10-10 00:42:35,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:35,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:36,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-10-10 00:42:36,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:36,883 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-10-10 00:42:37,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-10-10 00:42:37,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-10-10 00:42:38,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-10-10 00:42:38,445 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:38,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-10-10 00:42:39,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:40,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:40,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-10-10 00:42:41,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:41,176 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-10-10 00:42:41,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-10-10 00:42:41,670 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:42,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-10-10 00:42:42,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:43,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:43,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-10-10 00:42:44,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:44,193 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-10-10 00:42:44,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-10-10 00:42:44,684 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:45,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-10-10 00:42:45,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:46,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:46,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-10-10 00:42:47,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:47,371 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-10-10 00:42:47,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-10-10 00:42:48,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-10-10 00:42:48,291 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-10-10 00:42:49,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:49,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:50,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-10-10 00:42:50,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:50,890 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-10-10 00:42:51,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-10-10 00:42:51,398 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:52,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-10-10 00:42:52,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:52,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:53,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-10-10 00:42:53,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:53,948 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-10-10 00:42:54,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-10-10 00:42:54,459 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:42:55,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-10-10 00:42:55,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:42:56,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:42:56,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-10-10 00:42:56,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:42:56,978 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-10-10 00:42:56,978 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:42:56,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-10 00:42:56,979 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:56,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:56,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:42:56,983 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:42:56,983 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:42:56,986 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:42:56,988 [ scc.git] DEBUG Already up to date.
2025-10-10 00:42:56,988 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-10-10 00:42:57,297 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:57,297 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-10-10 00:42:57,301 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-10-10 00:42:57,580 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:57,580 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-10-10 00:42:57,584 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-10-10 00:42:57,862 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:57,862 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-10-10 00:42:57,866 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-10-10 00:42:58,149 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:58,149 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-10-10 00:42:58,153 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-10-10 00:42:58,436 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:58,436 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-10-10 00:42:58,440 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-10-10 00:42:58,726 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:58,726 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-10-10 00:42:58,730 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-10-10 00:42:59,010 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-10 00:42:59,010 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-10-10 00:42:59,014 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:42:59,014 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:42:59,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:59,016 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-10-10 00:42:59,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:59,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-10-10 00:42:59,028 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:59,033 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-10-10 00:42:59,033 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-10-10 00:42:59,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:59,197 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-10-10 00:42:59,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:59,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-10-10 00:42:59,216 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:42:59,216 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:42:59,221 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-10-10 00:42:59,221 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-10-10 00:42:59,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:59,586 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-10 00:42:59,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:42:59,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-10 00:42:59,605 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:42:59,605 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-10 00:42:59,605 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:42:59,605 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:42:59,608 [ scc.git] DEBUG Calling 'git reset --hard 33b0227c4ff7360db3df69da7546884b5cc61b2d'
2025-10-10 00:42:59,612 [ scc.git] DEBUG HEAD is now at 33b0227 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-10-10 00:42:59,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:42:59,993 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-10 00:42:59,995 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-10 00:42:59,998 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-10-10 00:43:00,000 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:00,000 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-10-10 00:43:00,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-10-10 00:43:00,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:00,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-10-10 00:43:00,019 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:43:00,020 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:00,024 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-10-10 00:43:00,024 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-10-10 00:43:00,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:00,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-10-10 00:43:00,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:00,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-10-10 00:43:00,410 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:43:00,410 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:00,414 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-10-10 00:43:00,414 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-10-10 00:43:00,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:00,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-10 00:43:00,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:00,803 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-10 00:43:00,818 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:43:00,818 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-10 00:43:00,818 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:43:00,818 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:43:00,821 [ scc.git] DEBUG Calling 'git reset --hard ac291b42e8f68f9ac935a477316217240117ea97'
2025-10-10 00:43:00,825 [ scc.git] DEBUG HEAD is now at ac291b4 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-10-10 00:43:01,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:01,196 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-10 00:43:01,199 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-10 00:43:01,201 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-10-10 00:43:01,203 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:01,203 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-10-10 00:43:01,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-10 00:43:01,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:01,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-10 00:43:01,225 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:43:01,225 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-10 00:43:01,225 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:43:01,225 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:43:01,228 [ scc.git] DEBUG Calling 'git reset --hard ac291b42e8f68f9ac935a477316217240117ea97'
2025-10-10 00:43:01,232 [ scc.git] DEBUG HEAD is now at ac291b4 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-10-10 00:43:01,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:01,589 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-10 00:43:01,591 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-10 00:43:01,593 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-10-10 00:43:01,596 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:01,596 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-10-10 00:43:01,596 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:43:01,632 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:01,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:01,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:43:01,667 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:43:01,671 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de2782a90> has no local changes
2025-10-10 00:43:01,671 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:43:01,677 [ scc.git] DEBUG [detached HEAD 61fac2e] merge master -Dorg -Ssuccess-only
2025-10-10 00:43:01,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:43:01,678 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:43:02,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-10-10 00:43:02,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None
2025-10-10 00:43:03,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-10-10 00:43:03,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-10-10 00:43:04,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-10-10 00:43:04,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-10-10 00:43:04,821 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:43:05,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-10-10 00:43:05,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:06,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:06,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-10-10 00:43:07,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:07,367 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-10-10 00:43:07,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-10-10 00:43:07,915 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:43:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-10-10 00:43:09,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:09,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:10,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-10-10 00:43:10,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:10,625 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-10-10 00:43:11,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-10-10 00:43:11,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-10-10 00:43:12,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-10-10 00:43:12,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-10-10 00:43:13,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-10-10 00:43:13,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:14,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-10-10 00:43:14,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:14,510 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-10-10 00:43:14,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-10-10 00:43:15,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-10-10 00:43:15,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-10-10 00:43:16,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:16,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-10-10 00:43:17,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:17,373 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-10-10 00:43:17,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-10-10 00:43:18,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-10-10 00:43:18,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-10-10 00:43:19,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:19,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-10-10 00:43:20,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:20,123 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-10-10 00:43:20,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-10-10 00:43:21,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-10-10 00:43:21,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-10-10 00:43:22,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:22,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:22,650 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:43:22,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-10 00:43:22,650 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:22,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:22,652 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:43:22,655 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:43:22,655 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:43:22,657 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:43:22,664 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-10-10 00:43:23,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-10-10 00:43:23,271 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-10-10 00:43:23,563 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-10 00:43:23,563 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-10-10 00:43:23,566 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-10-10 00:43:23,850 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-10 00:43:23,851 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-10-10 00:43:23,854 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-10-10 00:43:24,140 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-10 00:43:24,140 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-10-10 00:43:24,143 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-10-10 00:43:24,451 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-10 00:43:24,451 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-10-10 00:43:24,455 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-10-10 00:43:24,734 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-10 00:43:24,734 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-10-10 00:43:24,737 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:43:24,737 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:24,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:24,740 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-10-10 00:43:24,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:24,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-10-10 00:43:24,757 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-10-10 00:43:24,757 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-10-10 00:43:24,758 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:24,761 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-10-10 00:43:24,761 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-10-10 00:43:24,761 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-10-10 00:43:24,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:24,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-10-10 00:43:24,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:24,908 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-10-10 00:43:24,924 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-10-10 00:43:24,925 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-10-10 00:43:24,925 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-10-10 00:43:24,925 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-10-10 00:43:24,925 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:24,929 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-10-10 00:43:24,929 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-10-10 00:43:24,929 [ scc.git] DEBUG src/app/header.html | 5 +
2025-10-10 00:43:24,929 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-10-10 00:43:24,929 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-10-10 00:43:24,929 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-10-10 00:43:24,929 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-10-10 00:43:24,929 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-10-10 00:43:25,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:25,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-10-10 00:43:25,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:25,292 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-10-10 00:43:25,304 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-10-10 00:43:25,305 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:25,308 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-10-10 00:43:25,308 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-10-10 00:43:25,308 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-10-10 00:43:25,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:25,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-10-10 00:43:25,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:25,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-10-10 00:43:25,692 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:25,701 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-10-10 00:43:25,701 [ scc.git] DEBUG package.json | 2 +-
2025-10-10 00:43:25,701 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-10-10 00:43:26,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:26,073 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-10 00:43:26,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:26,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-10 00:43:26,113 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:43:26,113 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-10 00:43:26,113 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:43:26,114 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:43:26,116 [ scc.git] DEBUG Calling 'git reset --hard 9e6d9ede44459efe559f8287e13d54488613c163'
2025-10-10 00:43:26,122 [ scc.git] DEBUG HEAD is now at 9e6d9ed merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-10-10 00:43:26,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:26,457 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-10 00:43:26,459 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-10-10 00:43:26,462 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-10-10 00:43:26,464 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:26,464 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-10-10 00:43:26,464 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:43:26,502 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:26,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:26,504 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:43:26,539 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:43:26,545 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de264ddd0> has no local changes
2025-10-10 00:43:26,546 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:43:26,554 [ scc.git] DEBUG [detached HEAD 8d42d95] merge master -Dorg -Ssuccess-only
2025-10-10 00:43:26,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:43:26,554 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:43:26,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-10-10 00:43:27,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2025-10-10 00:43:27,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2025-10-10 00:43:27,933 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:43:28,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-10-10 00:43:29,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:29,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:29,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-10-10 00:43:30,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:30,409 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:43:30,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-10-10 00:43:31,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-10-10 00:43:31,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:32,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-10-10 00:43:32,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:32,852 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:43:33,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-10-10 00:43:33,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-10-10 00:43:34,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-10-10 00:43:34,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:35,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-10-10 00:43:35,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:35,790 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-10-10 00:43:35,791 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:43:35,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-10 00:43:35,791 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:35,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:35,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:43:35,795 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:43:35,795 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:43:35,798 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:43:35,800 [ scc.git] DEBUG Already up to date.
2025-10-10 00:43:35,800 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-10-10 00:43:36,089 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-10 00:43:36,089 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-10-10 00:43:36,092 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-10-10 00:43:36,365 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-10 00:43:36,365 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-10-10 00:43:36,368 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2025-10-10 00:43:36,647 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-10 00:43:36,647 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2025-10-10 00:43:36,651 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:43:36,651 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:36,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:36,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-10-10 00:43:36,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:36,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-10-10 00:43:36,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:36,669 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-10-10 00:43:36,669 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-10-10 00:43:36,669 [ scc.git] DEBUG requirements.txt | 2 +-
2025-10-10 00:43:36,669 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-10-10 00:43:36,669 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-10-10 00:43:36,669 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-10-10 00:43:36,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:36,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-10-10 00:43:36,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:36,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-10-10 00:43:36,986 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:36,989 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:43:36,989 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:43:37,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:37,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-10 00:43:37,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:37,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-10 00:43:37,367 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-10-10 00:43:37,368 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2025-10-10 00:43:37,368 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:43:37,368 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:43:37,370 [ scc.git] DEBUG Calling 'git reset --hard 464e7e3bceadf6d7d3ef97d92dbbec92bffe9a88'
2025-10-10 00:43:37,373 [ scc.git] DEBUG HEAD is now at 464e7e3 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2025-10-10 00:43:37,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:37,758 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-10 00:43:37,760 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2025-10-10 00:43:37,763 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2025-10-10 00:43:37,764 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:37,765 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2025-10-10 00:43:37,765 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:43:37,801 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:37,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:37,803 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:43:37,837 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:43:37,841 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de2782390> has no local changes
2025-10-10 00:43:37,841 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:43:37,846 [ scc.git] DEBUG [detached HEAD 50bbed2] merge master -Dorg -Ssuccess-only
2025-10-10 00:43:37,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:43:37,846 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:43:38,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-10-10 00:43:38,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-10-10 00:43:39,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-10-10 00:43:39,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-10-10 00:43:40,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:40,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-10-10 00:43:41,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:41,163 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-10-10 00:43:41,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-10-10 00:43:42,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-10-10 00:43:42,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-10-10 00:43:43,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:43,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-10-10 00:43:44,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:44,044 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-10-10 00:43:44,045 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:43:44,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-10 00:43:44,045 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:44,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:44,047 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:43:44,049 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:43:44,049 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:43:44,052 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:43:44,058 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-10-10 00:43:44,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-10-10 00:43:44,727 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-10-10 00:43:45,015 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-10-10 00:43:45,015 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-10-10 00:43:45,019 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-10-10 00:43:45,304 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-10-10 00:43:45,304 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-10-10 00:43:45,308 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:43:45,308 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:45,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:45,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-10 00:43:45,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:45,315 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-10 00:43:45,327 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-10-10 00:43:45,327 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-10-10 00:43:45,327 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-10-10 00:43:45,327 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-10-10 00:43:45,327 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:43:45,327 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:43:45,330 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-10 00:43:45,333 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-10 00:43:45,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:45,496 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-10 00:43:45,500 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-10 00:43:45,503 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-10-10 00:43:45,504 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:45,504 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-10-10 00:43:45,505 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-10 00:43:45,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:45,510 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-10 00:43:45,523 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-10-10 00:43:45,523 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-10-10 00:43:45,523 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-10-10 00:43:45,523 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:43:45,524 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:43:45,526 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-10 00:43:45,530 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-10 00:43:45,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:45,889 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-10 00:43:45,892 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-10 00:43:45,895 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-10-10 00:43:45,897 [ scc.config] DEBUG Found github.token
2025-10-10 00:43:45,897 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-10-10 00:43:45,897 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:43:45,934 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:45,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:45,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:43:45,971 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:43:45,974 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de2722690> has no local changes
2025-10-10 00:43:45,974 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:43:45,980 [ scc.git] DEBUG [detached HEAD 1415d6a] merge master -Dorg -Ssuccess-only
2025-10-10 00:43:45,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:43:45,981 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:43:46,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-10-10 00:43:46,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-10-10 00:43:47,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-10-10 00:43:47,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:48,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:48,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-10-10 00:43:49,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:49,406 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:43:49,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-10-10 00:43:49,908 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:43:50,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-10-10 00:43:51,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:51,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:52,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-10-10 00:43:52,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:52,526 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-10-10 00:43:53,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-10-10 00:43:53,024 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:43:53,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-10-10 00:43:54,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:43:54,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:43:55,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-10-10 00:43:55,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:43:55,661 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-10-10 00:43:56,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-10-10 00:43:56,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-10-10 00:43:57,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-10-10 00:43:57,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-10-10 00:43:57,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-10-10 00:43:58,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-10-10 00:43:58,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-10-10 00:43:58,935 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:43:58,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-10 00:43:58,935 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:58,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:58,938 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:43:58,940 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:43:58,940 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:43:58,942 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:43:58,945 [ scc.git] DEBUG Already up to date.
2025-10-10 00:43:58,945 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-10-10 00:43:59,246 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-10 00:43:59,246 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-10-10 00:43:59,250 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-10-10 00:43:59,525 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-10 00:43:59,525 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-10-10 00:43:59,528 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-10-10 00:43:59,806 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-10 00:43:59,806 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-10-10 00:43:59,810 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:43:59,810 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:43:59,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:59,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-10-10 00:43:59,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:59,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-10-10 00:43:59,823 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:59,825 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-10-10 00:43:59,826 [ scc.git] DEBUG package.json | 2 +-
2025-10-10 00:43:59,826 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-10-10 00:43:59,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:43:59,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-10-10 00:43:59,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:43:59,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-10-10 00:43:59,983 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-10 00:43:59,983 [ scc.git] DEBUG Auto-merging package.json
2025-10-10 00:43:59,983 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:43:59,986 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-10-10 00:43:59,986 [ scc.git] DEBUG package.json | 2 +-
2025-10-10 00:43:59,986 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-10-10 00:44:00,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:00,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-10-10 00:44:00,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:00,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-10-10 00:44:00,371 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:00,373 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:00,373 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:00,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:00,775 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:00,811 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:00,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:00,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:00,847 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:00,850 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de263d390> has no local changes
2025-10-10 00:44:00,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:00,856 [ scc.git] DEBUG [detached HEAD 4a5d800] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:00,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:00,856 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:01,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2025-10-10 00:44:01,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2025-10-10 00:44:01,772 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:02,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-10-10 00:44:02,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:03,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:03,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-10-10 00:44:04,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:04,249 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:04,249 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:04,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-10 00:44:04,249 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:04,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:04,251 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:04,253 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:04,253 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:04,256 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:04,258 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:04,258 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-10-10 00:44:04,562 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2025-10-10 00:44:04,562 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-10-10 00:44:04,565 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:04,565 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:04,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:04,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2025-10-10 00:44:04,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:04,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2025-10-10 00:44:04,578 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:04,580 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:04,580 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:04,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:04,730 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:04,764 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:04,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:04,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:04,800 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:04,803 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de05b18d0> has no local changes
2025-10-10 00:44:04,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:04,808 [ scc.git] DEBUG [detached HEAD e5d3bd8] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:04,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:04,808 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:05,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-10-10 00:44:05,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2025-10-10 00:44:05,800 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:06,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-10 00:44:06,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:07,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:07,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-10 00:44:08,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:08,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-10 00:44:09,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2025-10-10 00:44:09,332 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:09,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-10-10 00:44:10,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-10-10 00:44:10,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-10 00:44:11,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:11,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:12,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-10 00:44:12,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:13,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-10 00:44:13,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-10-10 00:44:13,745 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-10-10 00:44:14,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-10-10 00:44:14,261 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:14,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-10 00:44:14,261 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:14,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:14,264 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:14,266 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:14,266 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:14,268 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:14,271 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:14,271 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-10-10 00:44:14,564 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-10-10 00:44:14,564 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-10-10 00:44:14,567 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2025-10-10 00:44:14,849 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-10-10 00:44:14,849 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2025-10-10 00:44:14,852 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:14,852 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:14,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:14,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-10-10 00:44:14,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:14,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-10-10 00:44:14,865 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:14,868 [ scc.git] DEBUG setup.py | 4 +-
2025-10-10 00:44:14,868 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-10-10 00:44:14,868 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-10-10 00:44:14,868 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-10-10 00:44:15,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:15,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2025-10-10 00:44:15,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:15,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2025-10-10 00:44:15,011 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:15,014 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:15,014 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:15,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:15,414 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:15,449 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:15,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:15,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:15,484 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:15,487 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de275a550> has no local changes
2025-10-10 00:44:15,487 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:15,492 [ scc.git] DEBUG [detached HEAD 83a873d] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:15,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:15,493 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:15,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-10-10 00:44:16,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2025-10-10 00:44:16,432 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:16,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-10-10 00:44:17,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:17,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:18,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-10-10 00:44:18,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:18,808 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:19,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-10-10 00:44:19,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-10-10 00:44:20,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-10-10 00:44:20,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:21,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-10-10 00:44:21,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:21,906 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-10-10 00:44:21,906 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:21,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-10 00:44:21,906 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:21,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:21,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:21,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:21,911 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:21,913 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:21,916 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:21,916 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-10-10 00:44:22,218 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-10-10 00:44:22,218 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-10-10 00:44:22,222 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-10-10 00:44:22,502 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-10-10 00:44:22,502 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-10-10 00:44:22,506 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:22,506 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:22,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:22,508 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-10 00:44:22,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:22,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-10 00:44:22,520 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-10-10 00:44:22,520 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-10-10 00:44:22,520 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-10-10 00:44:22,520 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-10-10 00:44:22,520 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-10-10 00:44:22,520 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-10-10 00:44:22,521 [ scc.git] DEBUG Auto-merging setup.py
2025-10-10 00:44:22,521 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-10-10 00:44:22,521 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:44:22,521 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:44:22,523 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-10-10 00:44:22,527 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-10-10 00:44:22,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:22,664 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-10 00:44:22,666 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-10-10 00:44:22,669 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- omero_signup/urls.py
- setup.py
- omero_signup/views.py
--conflicts
2025-10-10 00:44:22,671 [ scc.config] DEBUG Found github.token
2025-10-10 00:44:22,671 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-10-10 00:44:22,671 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-10-10 00:44:22,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:22,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-10-10 00:44:22,681 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:22,683 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:22,683 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:23,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:23,055 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:23,090 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:23,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:23,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:23,126 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:23,128 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de058f9d0> has no local changes
2025-10-10 00:44:23,129 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:23,134 [ scc.git] DEBUG [detached HEAD 99cee41] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:23,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:23,134 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:23,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-10-10 00:44:24,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-10-10 00:44:24,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-10-10 00:44:25,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:25,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:26,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-10-10 00:44:26,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:26,604 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-10-10 00:44:27,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-10-10 00:44:27,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-10-10 00:44:28,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-10-10 00:44:28,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:29,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:29,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-10-10 00:44:30,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-10-10 00:44:30,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-10-10 00:44:30,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-10-10 00:44:31,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-10-10 00:44:31,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:32,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-10-10 00:44:32,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:32,840 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-10-10 00:44:32,841 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:32,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-10 00:44:32,841 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:32,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:32,843 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:32,845 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:32,845 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:32,848 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:32,850 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:32,851 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-10-10 00:44:33,145 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-10-10 00:44:33,145 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-10-10 00:44:33,149 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-10-10 00:44:33,444 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-10-10 00:44:33,444 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-10-10 00:44:33,447 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:33,447 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:33,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:33,449 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-10-10 00:44:33,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:33,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-10-10 00:44:33,464 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-10-10 00:44:33,467 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-10-10 00:44:33,468 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-10-10 00:44:33,468 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-10-10 00:44:33,468 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-10-10 00:44:33,468 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-10-10 00:44:33,468 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-10-10 00:44:33,468 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-10-10 00:44:33,469 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-10-10 00:44:33,469 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-10-10 00:44:33,469 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-10-10 00:44:33,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:33,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-10-10 00:44:33,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:33,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-10-10 00:44:33,620 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:33,623 [ scc.git] DEBUG docker | 1 +
2025-10-10 00:44:33,623 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-10-10 00:44:34,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:34,010 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:34,045 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:34,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:34,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:34,080 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:34,083 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de058d410> has no local changes
2025-10-10 00:44:34,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:34,088 [ scc.git] DEBUG [detached HEAD e2648f6] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:34,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:34,089 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:34,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2025-10-10 00:44:35,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2025-10-10 00:44:35,014 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:35,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-10-10 00:44:36,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:36,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:37,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-10-10 00:44:37,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:37,485 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:37,485 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:37,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-10 00:44:37,485 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:37,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:37,487 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:37,489 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:37,489 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:37,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:37,494 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:37,494 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-10-10 00:44:37,780 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2025-10-10 00:44:37,780 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-10-10 00:44:37,783 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:37,783 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:37,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:37,785 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-10-10 00:44:37,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:37,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-10-10 00:44:37,796 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:37,798 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:37,798 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:37,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:37,942 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:37,976 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:37,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:37,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:38,013 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:38,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de053f090> has no local changes
2025-10-10 00:44:38,016 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:38,021 [ scc.git] DEBUG [detached HEAD 31662b8] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:38,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:38,021 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:38,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-10-10 00:44:38,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2025-10-10 00:44:38,945 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:39,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-10-10 00:44:40,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:40,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:41,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-10-10 00:44:41,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:41,421 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:41,421 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:41,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-10 00:44:41,421 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:41,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:41,423 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:41,425 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:41,426 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:41,428 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:41,434 [ scc.git] DEBUG Updating deab817..160d894
2025-10-10 00:44:42,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-10-10 00:44:42,083 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-10-10 00:44:42,368 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-10-10 00:44:42,368 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-10-10 00:44:42,371 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:42,371 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:42,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:42,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-10-10 00:44:42,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:42,378 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-10-10 00:44:42,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:42,386 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:42,386 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:42,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:42,545 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:42,580 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:42,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:42,582 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:42,616 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:42,619 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de0554a50> has no local changes
2025-10-10 00:44:42,619 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:42,624 [ scc.git] DEBUG [detached HEAD 0c1863f] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:42,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:42,624 [ scc.git] INFO Overriding base-branch from master to main
2025-10-10 00:44:42,624 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:43,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-10-10 00:44:43,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2025-10-10 00:44:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2025-10-10 00:44:44,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-10-10 00:44:45,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:45,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:46,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-10-10 00:44:46,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:46,513 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2025-10-10 00:44:47,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-10-10 00:44:47,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-10-10 00:44:47,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-10-10 00:44:48,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-10-10 00:44:49,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:49,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-10-10 00:44:49,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:49,963 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-10-10 00:44:49,963 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:49,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-10 00:44:49,963 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:49,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:49,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-10-10 00:44:49,968 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:49,968 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-10-10 00:44:49,970 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-10-10 00:44:49,976 [ scc.git] DEBUG Updating 8f3c313..00e0207
2025-10-10 00:44:50,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2025-10-10 00:44:50,615 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-10-10 00:44:50,906 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-10-10 00:44:50,906 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-10-10 00:44:50,909 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2025-10-10 00:44:51,186 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-10-10 00:44:51,186 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2025-10-10 00:44:51,189 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:51,189 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:51,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:51,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-10 00:44:51,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:51,196 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-10 00:44:51,203 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-10-10 00:44:51,203 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-10-10 00:44:51,203 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-10-10 00:44:51,203 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:44:51,203 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:44:51,205 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-10-10 00:44:51,208 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-10-10 00:44:51,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:51,370 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-10 00:44:51,373 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-10-10 00:44:51,375 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-10-10 00:44:51,377 [ scc.config] DEBUG Found github.token
2025-10-10 00:44:51,377 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-10-10 00:44:51,377 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-10-10 00:44:51,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:51,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-10-10 00:44:51,388 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-10-10 00:44:51,389 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:51,392 [ scc.git] DEBUG README.rst | 3 +
2025-10-10 00:44:51,392 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2025-10-10 00:44:51,392 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2025-10-10 00:44:51,392 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2025-10-10 00:44:51,392 [ scc.git] DEBUG setup.py | 5 +-
2025-10-10 00:44:51,392 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2025-10-10 00:44:51,392 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2025-10-10 00:44:51,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:51,769 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:51,806 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:51,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:51,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:51,842 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:51,845 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de275b150> has no local changes
2025-10-10 00:44:51,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:51,850 [ scc.git] DEBUG [detached HEAD 73218f5] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:51,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:51,850 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:52,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2025-10-10 00:44:52,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2025-10-10 00:44:52,732 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:53,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-10-10 00:44:53,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:54,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:54,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-10-10 00:44:55,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:55,346 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:55,346 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:55,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-10 00:44:55,346 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:55,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:55,348 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:55,350 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:55,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:55,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:55,355 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:55,355 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2025-10-10 00:44:55,650 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2025-10-10 00:44:55,650 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2025-10-10 00:44:55,653 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:55,653 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:55,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:55,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-10-10 00:44:55,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:55,660 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-10-10 00:44:55,666 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:55,668 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:55,668 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:44:55,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:44:55,820 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:44:55,856 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:55,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:55,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:44:55,892 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:44:55,895 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de26e1750> has no local changes
2025-10-10 00:44:55,895 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:44:55,900 [ scc.git] DEBUG [detached HEAD 591a67b] merge master -Dorg -Ssuccess-only
2025-10-10 00:44:55,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:44:55,900 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:44:56,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2025-10-10 00:44:56,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2025-10-10 00:44:56,819 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-10 00:44:57,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-10-10 00:44:57,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:44:58,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:44:59,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-10-10 00:44:59,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:44:59,511 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:44:59,511 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:44:59,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-10 00:44:59,511 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:59,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:59,513 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:44:59,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:44:59,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:44:59,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:44:59,520 [ scc.git] DEBUG Already up to date.
2025-10-10 00:44:59,520 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2025-10-10 00:44:59,843 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2025-10-10 00:44:59,844 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2025-10-10 00:44:59,847 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:44:59,847 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:44:59,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:59,849 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-10-10 00:44:59,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:44:59,854 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-10-10 00:44:59,860 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:44:59,862 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-10 00:44:59,862 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-10 00:45:00,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:00,015 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:45:00,050 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:00,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:00,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:45:00,086 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:45:00,089 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de061ec90> has no local changes
2025-10-10 00:45:00,089 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:45:00,095 [ scc.git] DEBUG [detached HEAD df0c4af] merge master -Dorg -Ssuccess-only
2025-10-10 00:45:00,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:00,095 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:45:00,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-10-10 00:45:01,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-10-10 00:45:01,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-10-10 00:45:02,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-10-10 00:45:02,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:45:03,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-10-10 00:45:03,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:45:03,541 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-10-10 00:45:03,542 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:45:03,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-10 00:45:03,542 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:03,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:03,544 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-10 00:45:03,546 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:45:03,546 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-10 00:45:03,548 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-10 00:45:03,551 [ scc.git] DEBUG Already up to date.
2025-10-10 00:45:03,551 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-10-10 00:45:03,835 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-10-10 00:45:03,835 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-10-10 00:45:03,839 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:45:03,839 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:03,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:03,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-10 00:45:03,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:03,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-10 00:45:03,853 [ scc.git] DEBUG Auto-merging Dockerfile
2025-10-10 00:45:03,853 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-10-10 00:45:03,853 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:45:03,853 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:45:03,856 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-10-10 00:45:03,860 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-10-10 00:45:04,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:04,002 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-10 00:45:04,004 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-10-10 00:45:04,007 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-10-10 00:45:04,009 [ scc.config] DEBUG Found github.token
2025-10-10 00:45:04,009 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-10-10 00:45:04,009 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:45:04,044 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:04,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:04,045 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:45:04,079 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:45:04,083 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de05f7250> has no local changes
2025-10-10 00:45:04,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:45:04,088 [ scc.git] DEBUG [detached HEAD 74794b6] merge master -Dorg -Ssuccess-only
2025-10-10 00:45:04,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:04,088 [ scc.git] INFO Overriding base-branch from master to develop
2025-10-10 00:45:04,088 [ scc.repo] DEBUG ## PRs found:
2025-10-10 00:45:04,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-10-10 00:45:05,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-10-10 00:45:05,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-10-10 00:45:05,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-10-10 00:45:06,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:45:06,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-10 00:45:07,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-10-10 00:45:07,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:45:07,865 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-10-10 00:45:08,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-10-10 00:45:08,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-10-10 00:45:09,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-10-10 00:45:09,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-10 00:45:10,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-10-10 00:45:10,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-10-10 00:45:10,847 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-10-10 00:45:11,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-10-10 00:45:11,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-10-10 00:45:12,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-10-10 00:45:12,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-10-10 00:45:12,783 [ scc.repo] DEBUG ## Branches found:
2025-10-10 00:45:12,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-10 00:45:12,783 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:12,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:12,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-10-10 00:45:12,788 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-10 00:45:12,788 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-10-10 00:45:12,790 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-10-10 00:45:12,799 [ scc.git] DEBUG Updating 4b4c755..03b9116
2025-10-10 00:45:13,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2025-10-10 00:45:14,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-10-10 00:45:14,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-10-10 00:45:14,834 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-10-10 00:45:15,137 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-10-10 00:45:15,138 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-10-10 00:45:15,141 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-10-10 00:45:15,438 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-10-10 00:45:15,438 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-10-10 00:45:15,442 [ scc.git] DEBUG ## Unique users: []
2025-10-10 00:45:15,442 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:15,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:15,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-10 00:45:15,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:15,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-10 00:45:15,460 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-10-10 00:45:15,460 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-10 00:45:15,461 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-10 00:45:15,463 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5'
2025-10-10 00:45:15,466 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-10-10 00:45:15,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:15,614 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-10 00:45:15,619 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5'
2025-10-10 00:45:15,622 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#553](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-10-10 00:45:15,624 [ scc.config] DEBUG Found github.token
2025-10-10 00:45:15,624 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-10-10 00:45:15,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-10-10 00:45:15,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:15,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-10-10 00:45:15,638 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-10 00:45:15,641 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-10-10 00:45:15,641 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-10-10 00:45:16,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:16,083 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-10 00:45:16,118 [ scc.git] DEBUG Get sha1 of %s
2025-10-10 00:45:16,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-10 00:45:16,120 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:45:16,154 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:45:16,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de0631a50> has no local changes
2025-10-10 00:45:16,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:45:16,162 [ scc.git] DEBUG [detached HEAD 77f776b] merge master -Dorg -Ssuccess-only
2025-10-10 00:45:16,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:16,163 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-10 00:45:16,228 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-10-10 00:45:16,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:16,484 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-10-10 00:45:16,486 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-10-10 00:45:16,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:16,884 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-10-10 00:45:16,886 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-10-10 00:45:17,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:17,286 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-10-10 00:45:17,288 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-10-10 00:45:17,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:17,712 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-10-10 00:45:18,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:18,096 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-10-10 00:45:18,097 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-10-10 00:45:18,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:18,498 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-10-10 00:45:18,499 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-10-10 00:45:18,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:18,894 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-10-10 00:45:18,896 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-10-10 00:45:19,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:19,294 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-10-10 00:45:19,296 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-10-10 00:45:19,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:19,693 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-10-10 00:45:19,695 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-10-10 00:45:20,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:20,096 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-10-10 00:45:20,097 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-10-10 00:45:20,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:20,497 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-10-10 00:45:20,498 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-10-10 00:45:20,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:20,888 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-10-10 00:45:20,890 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-10-10 00:45:21,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:21,287 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-10-10 00:45:21,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:21,688 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-10-10 00:45:22,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:22,083 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-10-10 00:45:22,085 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-10-10 00:45:22,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:22,477 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-10-10 00:45:22,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:22,879 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-10-10 00:45:23,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:23,266 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-10-10 00:45:23,267 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-10-10 00:45:23,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:23,665 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-10-10 00:45:23,666 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-10-10 00:45:24,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:24,063 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-10-10 00:45:24,065 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-10-10 00:45:24,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:24,458 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-10-10 00:45:24,460 [ scc.config] DEBUG Found submodule.scripts.url
2025-10-10 00:45:24,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-10 00:45:24,864 [ scc.config] DEBUG Found submodule.scripts.branch
2025-10-10 00:45:24,864 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-10 00:45:24,938 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4de263da10> has local changes
2025-10-10 00:45:24,938 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..baab5c06
Previously merged:
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#553 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/553/)'
2025-10-10 00:45:24,948 [ scc.git] DEBUG [detached HEAD fc44dbd] merge master -Dorg -Ssuccess-only
2025-10-10 00:45:24,948 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-10-10 00:45:24,948 [ scc.merge] INFO Repository: ome/omero-plugins
2025-10-10 00:45:24,948 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,948 [ scc.merge] INFO
2025-10-10 00:45:24,948 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,948 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-10 00:45:24,948 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-10 00:45:24,948 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-10 00:45:24,948 [ scc.merge] INFO
2025-10-10 00:45:24,948 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-10-10 00:45:24,948 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,948 [ scc.merge] INFO
2025-10-10 00:45:24,948 [ scc.merge] INFO
2025-10-10 00:45:24,948 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-10-10 00:45:24,948 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,948 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-10-10 00:45:24,948 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,948 [ scc.merge] INFO
2025-10-10 00:45:24,948 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,948 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,948 [ scc.merge] INFO
2025-10-10 00:45:24,949 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-10-10 00:45:24,949 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,949 [ scc.merge] INFO
2025-10-10 00:45:24,949 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,949 [ scc.merge] INFO
2025-10-10 00:45:24,949 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-10-10 00:45:24,949 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-10-10 00:45:24,949 [ scc.merge] INFO Updating 11d3587..37ea700
2025-10-10 00:45:24,949 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:45:24,949 [ scc.merge] INFO
2025-10-10 00:45:24,949 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2025-10-10 00:45:24,949 [ scc.merge] INFO
2025-10-10 00:45:24,949 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 174 will-moore 'Skip wells'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-10-10 00:45:24,949 [ scc.merge] INFO
2025-10-10 00:45:24,949 [ scc.merge] INFO Repository: ome/omero-figure
2025-10-10 00:45:24,949 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-10-10 00:45:24,949 [ scc.merge] INFO Updating 9cc36cde..baab5c06
2025-10-10 00:45:24,949 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-10-10 00:45:24,949 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-10-10 00:45:24,950 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Repository: ome/omero-gallery
2025-10-10 00:45:24,950 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-10-10 00:45:24,950 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft)
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-10-10 00:45:24,950 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-10-10 00:45:24,950 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:45:24,950 [ scc.merge] INFO
2025-10-10 00:45:24,950 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-10-10 00:45:24,950 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Repository: ome/omero-mapr
2025-10-10 00:45:24,951 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-10-10 00:45:24,951 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Repository: ome/omero-metadata
2025-10-10 00:45:24,951 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-10-10 00:45:24,951 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Repository: ome/omero-parade
2025-10-10 00:45:24,951 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-10-10 00:45:24,951 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-10-10 00:45:24,951 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Repository: ome/omero-rois
2025-10-10 00:45:24,951 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,951 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-10-10 00:45:24,951 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,951 [ scc.merge] INFO
2025-10-10 00:45:24,951 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Repository: ome/omero-signup
2025-10-10 00:45:24,952 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-10-10 00:45:24,952 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-10-10 00:45:24,952 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Repository: ome/omero-upload
2025-10-10 00:45:24,952 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-10-10 00:45:24,952 [ scc.merge] INFO Updating deab817..160d894
2025-10-10 00:45:24,952 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-10-10 00:45:24,952 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-10-10 00:45:24,952 [ scc.merge] INFO Updating 8f3c313..00e0207
2025-10-10 00:45:24,952 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,952 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-10-10 00:45:24,952 [ scc.merge] INFO
2025-10-10 00:45:24,952 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-10-10 00:45:24,952 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-10-10 00:45:24,953 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-10-10 00:45:24,953 [ scc.merge] INFO Already up to date.
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Repository: ome/scripts
2025-10-10 00:45:24,953 [ scc.merge] INFO Excluded PRs:
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-10-10 00:45:24,953 [ scc.merge] INFO Updating 4b4c755..03b9116
2025-10-10 00:45:24,953 [ scc.merge] INFO Previously merged:
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Merged PRs:
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-10 00:45:24,953 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-10-10 00:45:24,953 [ scc.merge] INFO
2025-10-10 00:45:24,953 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-10 00:45:24,953 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-10 00:45:24,955 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-10 00:45:24,957 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-10 00:45:24,959 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-10 00:45:24,961 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-10 00:45:24,963 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-10 00:45:24,965 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-10 00:45:24,967 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-10 00:45:24,969 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-10 00:45:24,971 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-10 00:45:24,973 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-10 00:45:24,975 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-10 00:45:24,977 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-10 00:45:24,979 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-10 00:45:24,981 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-10 00:45:24,983 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-10 00:45:24,985 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-10 00:45:24,987 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-10 00:45:24,989 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-10 00:45:24,991 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-10 00:45:24,993 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-10 00:45:24,995 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-10 00:45:24,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-10 00:45:24,997 [ scc.git] DEBUG Calling 'git remote'
2025-10-10 00:45:24,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 156ad4d] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
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[detached HEAD dfa9980] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-10 00:46:11,420 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-10 00:46:20,711 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-10 00:46:23,195 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-10 00:46:27,896 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-10 00:47:06,989 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS