Started by upstream project "Trigger" build number 660
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 583
[Pipeline] sh
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
Using cached idna-3.11-py3-none-any.whl (71 kB)
Using cached certifi-2025.10.5-py3-none-any.whl (163 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.23-py3-none-any.whl (118 kB)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.10.5 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-10-22 00:50:57,217 [ scc.config] DEBUG Found github.token
2025-10-22 00:50:57,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-22 00:50:57,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:50:57,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:50:58,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-22 00:50:58,205 [ scc.gh] DEBUG 3892 remaining from 5000 (Reset at 00:10
2025-10-22 00:50:58,206 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:50:58,208 [ scc.git] DEBUG Check current status
2025-10-22 00:50:58,208 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:50:58,210 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-22 00:50:58,210 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:50:58,254 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-22 00:50:58,380 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-22 00:50:58,972 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-22 00:50:59,126 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-22 00:50:59,130 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-10-22 00:50:59,184 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-22 00:50:59,292 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-22 00:50:59,295 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-10-22 00:50:59,298 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-22 00:50:59,312 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-22 00:50:59,437 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-22 00:50:59,528 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-22 00:50:59,685 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-22 00:50:59,689 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-22 00:50:59,700 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-22 00:50:59,722 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-22 00:50:59,725 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-22 00:50:59,896 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-22 00:50:59,918 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-22 00:50:59,931 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-22 00:50:59,933 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-22 00:50:59,937 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-10-22 00:50:59,939 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:00,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-10-22 00:51:00,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:01,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:01,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:02,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:02,158 [ scc.git] DEBUG Resetting...
2025-10-22 00:51:02,158 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-22 00:51:02,164 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-22 00:51:02,164 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-22 00:51:02,257 [ scc.git] DEBUG Check current status
2025-10-22 00:51:02,257 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:02,259 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-22 00:51:02,260 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:02,302 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-22 00:51:02,304 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-22 00:51:02,307 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-22 00:51:02,310 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-22 00:51:02,315 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-10-22 00:51:02,317 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-22 00:51:02,320 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-22 00:51:02,323 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-10-22 00:51:02,326 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-22 00:51:02,329 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-22 00:51:02,332 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-22 00:51:02,334 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-22 00:51:02,337 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-22 00:51:02,340 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-22 00:51:02,343 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-22 00:51:02,345 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-22 00:51:02,348 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-22 00:51:02,350 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-22 00:51:02,353 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-22 00:51:02,356 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-22 00:51:02,358 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-22 00:51:02,362 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-10-22 00:51:02,362 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-10-22 00:51:02,363 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-10-22 00:51:02,363 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-10-22 00:51:02,363 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-10-22 00:51:02,363 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-10-22 00:51:02,363 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:51:02,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-10-22 00:51:03,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-10-22 00:51:03,329 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:51:03,329 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-22 00:51:03,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-10-22 00:51:03,860 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:51:03,860 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-22 00:51:04,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-10-22 00:51:04,359 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:51:04,359 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-22 00:51:04,359 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:51:04,359 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:51:04,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:51:04,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:51:04,363 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:51:04,363 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:51:04,366 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:51:04,368 [ scc.git] DEBUG Already up to date.
2025-10-22 00:51:04,368 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-10-22 00:51:04,668 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-22 00:51:04,668 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-10-22 00:51:04,674 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-10-22 00:51:04,959 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-22 00:51:04,959 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-10-22 00:51:04,965 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-10-22 00:51:05,249 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-22 00:51:05,249 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-10-22 00:51:05,255 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:51:05,255 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:51:05,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:51:05,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-22 00:51:05,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:51:05,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-22 00:51:05,275 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:51:05,277 [ scc.git] DEBUG scripts | 2 +-
2025-10-22 00:51:05,277 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:51:05,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:51:05,420 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-22 00:51:05,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:51:05,465 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-22 00:51:05,490 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:51:05,493 [ scc.git] DEBUG omero-figure | 2 +-
2025-10-22 00:51:05,493 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:51:05,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:51:05,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-22 00:51:05,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:51:05,825 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-22 00:51:05,838 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:51:05,840 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-10-22 00:51:05,840 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:51:06,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:51:06,206 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:51:06,263 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-10-22 00:51:06,745 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-10-22 00:51:06,759 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-10-22 00:51:06,760 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:51:06,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:51:06,762 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:51:08,733 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb7d0aaf3d0> has no local changes
2025-10-22 00:51:08,733 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:51:08,798 [ scc.git] DEBUG [detached HEAD 5453f7b] merge master -Dorg -Snone
2025-10-22 00:51:08,798 [ scc.merge] INFO Repository: ome/omero-plugins
2025-10-22 00:51:08,798 [ scc.merge] INFO Already up to date.
2025-10-22 00:51:08,798 [ scc.merge] INFO
2025-10-22 00:51:08,798 [ scc.merge] INFO Merged PRs:
2025-10-22 00:51:08,798 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-22 00:51:08,798 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-22 00:51:08,798 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-22 00:51:08,798 [ scc.merge] INFO
2025-10-22 00:51:08,798 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-22 00:51:08,798 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b'
From https://github.com/ome/omero-figure
* [new branch] dependabot/npm_and_yarn/vite-6.4.1 -> origin/dependabot/npm_and_yarn/vite-6.4.1
Submodule path 'omero-figure': checked out 'baab5c06714c374450f7312b1563a593bde691c3'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15'
Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-10-22 00:51:17,545 [ scc.config] DEBUG Found github.token
2025-10-22 00:51:17,546 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-22 00:51:17,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:51:18,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:51:18,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-22 00:51:18,515 [ scc.gh] DEBUG 3878 remaining from 5000 (Reset at 00:10
2025-10-22 00:51:18,515 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:18,518 [ scc.git] DEBUG Check current status
2025-10-22 00:51:18,518 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:18,520 [ scc.git] DEBUG 5453f7b merge master -Dorg -Snone
2025-10-22 00:51:18,520 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:18,563 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-22 00:51:18,565 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-22 00:51:18,568 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-22 00:51:18,571 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700)
2025-10-22 00:51:18,578 [ scc.git] DEBUG +baab5c06714c374450f7312b1563a593bde691c3 omero-figure (v7.2.1-106-gbaab5c06)
2025-10-22 00:51:18,581 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-22 00:51:18,584 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-22 00:51:19,081 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-10-22 00:51:19,084 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-22 00:51:19,087 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-10-22 00:51:19,090 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-22 00:51:19,093 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-22 00:51:19,096 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-22 00:51:19,099 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-22 00:51:19,102 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-22 00:51:19,105 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-22 00:51:19,133 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-10-22 00:51:19,136 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207)
2025-10-22 00:51:19,139 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-22 00:51:19,141 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-22 00:51:19,144 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-22 00:51:19,147 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116)
2025-10-22 00:51:19,150 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:19,150 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-10-22 00:51:19,152 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-10-22 00:51:19,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-10-22 00:51:19,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:20,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:20,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:21,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:21,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:21,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-22 00:51:21,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:21,270 [ scc.git] DEBUG Check current status
2025-10-22 00:51:21,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:21,272 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-10-22 00:51:21,272 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:21,307 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:21,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-10-22 00:51:22,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:22,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:23,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:23,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:23,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:23,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:23,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-22 00:51:23,450 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:23,452 [ scc.git] DEBUG Check current status
2025-10-22 00:51:23,452 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:23,454 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-10-22 00:51:23,455 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:23,490 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:23,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-10-22 00:51:24,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:24,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:25,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:25,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:25,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:25,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:25,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-22 00:51:25,791 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:25,793 [ scc.git] DEBUG Check current status
2025-10-22 00:51:25,793 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:25,795 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-10-22 00:51:25,795 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:25,831 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:26,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-10-22 00:51:26,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:27,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:27,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:28,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:28,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:28,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:28,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-22 00:51:28,248 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:28,250 [ scc.git] DEBUG Check current status
2025-10-22 00:51:28,250 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:28,252 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0
2025-10-22 00:51:28,252 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:28,288 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:28,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-10-22 00:51:29,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:29,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:30,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:30,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:30,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:30,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:30,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-22 00:51:30,559 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:30,561 [ scc.git] DEBUG Check current status
2025-10-22 00:51:30,561 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:30,564 [ scc.git] DEBUG baab5c06 Merge pull request #612 from will-moore/script_version
2025-10-22 00:51:30,564 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:30,600 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:31,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-10-22 00:51:31,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:31,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:32,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:32,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:32,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:32,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:32,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-22 00:51:32,769 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:32,771 [ scc.git] DEBUG Check current status
2025-10-22 00:51:32,771 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:32,773 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-10-22 00:51:32,773 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:32,809 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:33,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-10-22 00:51:33,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:34,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:34,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:35,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:35,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:35,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:35,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-22 00:51:35,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:35,093 [ scc.git] DEBUG Check current status
2025-10-22 00:51:35,093 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:35,095 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-10-22 00:51:35,096 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:35,132 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:35,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-10-22 00:51:36,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:36,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:36,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:37,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:37,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:37,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:37,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-22 00:51:37,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:37,385 [ scc.git] DEBUG Check current status
2025-10-22 00:51:37,386 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:37,388 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-10-22 00:51:37,388 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:37,423 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:37,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-10-22 00:51:38,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:38,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:39,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:39,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:39,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:39,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:39,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-22 00:51:39,757 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:39,759 [ scc.git] DEBUG Check current status
2025-10-22 00:51:39,759 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:39,761 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-10-22 00:51:39,761 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:39,796 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:40,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-10-22 00:51:40,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:41,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:41,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:41,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:41,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:41,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:41,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-22 00:51:41,993 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:41,995 [ scc.git] DEBUG Check current status
2025-10-22 00:51:41,995 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:41,997 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-22 00:51:41,998 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:42,033 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:42,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-10-22 00:51:42,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:43,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:43,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:44,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:44,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:44,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:44,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-22 00:51:44,293 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:44,294 [ scc.git] DEBUG Check current status
2025-10-22 00:51:44,295 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:44,297 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-10-22 00:51:44,297 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:44,334 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:44,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-10-22 00:51:45,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:45,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:46,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:46,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:46,547 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:46,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:46,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-22 00:51:46,583 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:46,585 [ scc.git] DEBUG Check current status
2025-10-22 00:51:46,585 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:46,587 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-10-22 00:51:46,587 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:46,623 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:47,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-10-22 00:51:47,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:47,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:48,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:48,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:48,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:49,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:49,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-22 00:51:49,018 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:49,020 [ scc.git] DEBUG Check current status
2025-10-22 00:51:49,020 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:49,022 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-10-22 00:51:49,022 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:49,058 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:49,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-10-22 00:51:50,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:50,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:50,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:51,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:51,254 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:51,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:51,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-22 00:51:51,289 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:51,291 [ scc.git] DEBUG Check current status
2025-10-22 00:51:51,291 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:51,293 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-10-22 00:51:51,293 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:51,328 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:51,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-10-22 00:51:52,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:52,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:53,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:53,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:53,543 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:53,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:53,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-22 00:51:53,579 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:53,581 [ scc.git] DEBUG Check current status
2025-10-22 00:51:53,581 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:53,583 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2025-10-22 00:51:53,583 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:53,619 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:53,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-22 00:51:53,979 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-22 00:51:54,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-10-22 00:51:54,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:55,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:55,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:56,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:56,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:56,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:56,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-22 00:51:56,042 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:56,043 [ scc.git] DEBUG Check current status
2025-10-22 00:51:56,043 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:56,045 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-10-22 00:51:56,046 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:56,081 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:56,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-10-22 00:51:56,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:57,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:51:57,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:51:58,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:51:58,202 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:51:58,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:51:58,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-22 00:51:58,238 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:51:58,240 [ scc.git] DEBUG Check current status
2025-10-22 00:51:58,240 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:51:58,242 [ scc.git] DEBUG 160d894 Fix display of code
2025-10-22 00:51:58,242 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:51:58,278 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:51:58,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-10-22 00:51:59,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:51:59,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:52:00,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:52:00,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:52:00,557 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:00,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:00,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-22 00:52:00,593 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:52:00,595 [ scc.git] DEBUG Check current status
2025-10-22 00:52:00,595 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:52:00,597 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-10-22 00:52:00,597 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:52:00,632 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:52:00,633 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-10-22 00:52:01,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-10-22 00:52:01,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:52:02,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:52:02,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:52:02,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:52:02,849 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:02,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:02,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-22 00:52:02,885 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:52:02,887 [ scc.git] DEBUG Check current status
2025-10-22 00:52:02,887 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:52:02,890 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-10-22 00:52:02,890 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:52:02,927 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:52:03,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-22 00:52:03,260 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-22 00:52:03,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-10-22 00:52:03,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:52:04,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:52:04,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:52:05,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:52:05,266 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:05,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:05,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-22 00:52:05,302 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:52:05,304 [ scc.git] DEBUG Check current status
2025-10-22 00:52:05,304 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:52:05,306 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-10-22 00:52:05,306 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:52:05,341 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:52:05,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-22 00:52:05,677 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-22 00:52:06,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-10-22 00:52:06,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:52:07,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:52:07,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:52:08,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:52:08,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:08,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:08,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-22 00:52:08,301 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:52:08,303 [ scc.git] DEBUG Check current status
2025-10-22 00:52:08,303 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:52:08,305 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-10-22 00:52:08,305 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:52:08,341 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:52:08,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-10-22 00:52:09,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:52:09,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:52:10,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:52:10,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:52:10,508 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:10,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:10,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-22 00:52:10,545 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-22 00:52:10,546 [ scc.git] DEBUG Check current status
2025-10-22 00:52:10,547 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:52:10,549 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-10-22 00:52:10,549 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:52:10,584 [ scc.config] DEBUG Found remote.origin.url
2025-10-22 00:52:10,584 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-10-22 00:52:10,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-22 00:52:10,925 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-22 00:52:11,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-10-22 00:52:11,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-22 00:52:12,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-22 00:52:12,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-22 00:52:12,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-22 00:52:12,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:12,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:12,983 [ scc.git] DEBUG Resetting...
2025-10-22 00:52:12,983 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-22 00:52:12,989 [ scc.git] DEBUG HEAD is now at 5453f7b merge master -Dorg -Snone
2025-10-22 00:52:12,989 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-22 00:52:13,044 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-10-22 00:52:13,066 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-10-22 00:52:13,085 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-10-22 00:52:13,099 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-10-22 00:52:13,124 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-10-22 00:52:13,134 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-10-22 00:52:13,156 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-10-22 00:52:13,159 [ scc.git] DEBUG Check current status
2025-10-22 00:52:13,159 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-22 00:52:13,161 [ scc.git] DEBUG 5453f7b merge master -Dorg -Snone
2025-10-22 00:52:13,161 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-22 00:52:13,202 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-22 00:52:13,204 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-22 00:52:13,207 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-22 00:52:13,210 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-22 00:52:13,214 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-10-22 00:52:13,217 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-22 00:52:13,219 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-22 00:52:13,223 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-10-22 00:52:13,226 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-22 00:52:13,228 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-22 00:52:13,231 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-22 00:52:13,234 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-22 00:52:13,237 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-22 00:52:13,239 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-22 00:52:13,242 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-22 00:52:13,245 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-22 00:52:13,247 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-22 00:52:13,249 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-22 00:52:13,252 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-22 00:52:13,255 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-22 00:52:13,257 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-22 00:52:13,261 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-10-22 00:52:13,261 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-10-22 00:52:13,261 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-10-22 00:52:13,261 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-10-22 00:52:13,261 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-10-22 00:52:13,261 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-10-22 00:52:13,261 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-10-22 00:52:13,261 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:52:13,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-10-22 00:52:14,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-10-22 00:52:14,015 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:52:14,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-10-22 00:52:15,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:15,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-10-22 00:52:16,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:16,108 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-22 00:52:16,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-10-22 00:52:16,581 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:52:17,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-10-22 00:52:17,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:18,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-10-22 00:52:18,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:18,579 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-22 00:52:19,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-10-22 00:52:19,102 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:52:19,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-10-22 00:52:20,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:20,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-10-22 00:52:21,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:21,074 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-22 00:52:21,074 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:52:21,074 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:21,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:21,076 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:52:21,078 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:52:21,078 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:52:21,081 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:52:21,083 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:21,083 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-10-22 00:52:21,394 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-22 00:52:21,394 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-10-22 00:52:21,399 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-10-22 00:52:21,681 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-22 00:52:21,681 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-10-22 00:52:21,686 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-10-22 00:52:21,965 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-22 00:52:21,965 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-10-22 00:52:21,971 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:52:21,971 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:21,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:21,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-22 00:52:21,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:21,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-22 00:52:21,980 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:22,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:22,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-22 00:52:22,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:22,132 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-22 00:52:22,134 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:22,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:22,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-22 00:52:22,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:22,524 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-22 00:52:22,527 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:22,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:22,909 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:52:22,957 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:22,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:22,958 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:52:23,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-10-22 00:52:23,334 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:52:23,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-22 00:52:23,334 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:23,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:23,336 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:52:23,338 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:52:23,338 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:52:23,341 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:52:23,344 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:23,344 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:52:23,344 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:23,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:23,346 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:52:23,380 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:23,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:23,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:23,416 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:52:23,418 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf49e4d0> has no local changes
2025-10-22 00:52:23,419 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:52:23,424 [ scc.git] DEBUG [detached HEAD 267fb8a] merge master -Dorg -Ssuccess-only
2025-10-22 00:52:23,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:23,424 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:52:23,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-10-22 00:52:24,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2025-10-22 00:52:24,397 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:52:25,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-10-22 00:52:25,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:25,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:26,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-10-22 00:52:26,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:26,974 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:52:27,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-10-22 00:52:27,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-10-22 00:52:27,964 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:52:27,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-22 00:52:27,964 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:27,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:27,967 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:52:27,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:52:27,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:52:27,971 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:52:27,974 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:27,974 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2025-10-22 00:52:28,255 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2025-10-22 00:52:28,256 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2025-10-22 00:52:28,259 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:52:28,260 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:28,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:28,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-10-22 00:52:28,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:28,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-10-22 00:52:28,272 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:52:28,275 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:52:28,275 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:52:28,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:28,436 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:52:28,471 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:28,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:28,473 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:28,507 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:52:28,509 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf655b90> has no local changes
2025-10-22 00:52:28,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:52:28,515 [ scc.git] DEBUG [detached HEAD 75a9eea] merge master -Dorg -Ssuccess-only
2025-10-22 00:52:28,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:28,515 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:52:29,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-10-22 00:52:29,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None
2025-10-22 00:52:29,568 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:52:30,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-10-22 00:52:30,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:31,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:31,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-10-22 00:52:32,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:32,178 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:52:32,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-10-22 00:52:33,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-10-22 00:52:33,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:34,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-10-22 00:52:34,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:34,683 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-10-22 00:52:35,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-10-22 00:52:35,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-10-22 00:52:36,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-10-22 00:52:36,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:37,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:37,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-10-22 00:52:38,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:38,250 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-10-22 00:52:38,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-10-22 00:52:39,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-10-22 00:52:39,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-10-22 00:52:40,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:40,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:41,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-10-22 00:52:41,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:52:41,574 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-10-22 00:52:42,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-10-22 00:52:42,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-10-22 00:52:42,561 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:52:42,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-22 00:52:42,562 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:42,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:42,564 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:52:42,566 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:52:42,566 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:52:42,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:52:42,571 [ scc.git] DEBUG Already up to date.
2025-10-22 00:52:42,571 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-10-22 00:52:43,607 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-22 00:52:43,607 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-10-22 00:52:43,611 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-10-22 00:52:43,900 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-22 00:52:43,900 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-10-22 00:52:43,903 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-10-22 00:52:44,195 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-22 00:52:44,195 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-10-22 00:52:44,199 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head'
2025-10-22 00:52:44,490 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-22 00:52:44,490 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD
2025-10-22 00:52:44,494 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:52:44,494 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:44,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:44,497 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-10-22 00:52:44,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:44,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-10-22 00:52:44,560 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:52:44,562 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-10-22 00:52:44,563 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-10-22 00:52:44,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:44,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-10-22 00:52:44,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:44,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-10-22 00:52:44,930 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-10-22 00:52:44,930 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:52:44,933 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-10-22 00:52:44,933 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-10-22 00:52:45,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:45,133 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-10-22 00:52:45,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:45,138 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-10-22 00:52:45,212 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-10-22 00:52:45,213 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:52:45,215 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-10-22 00:52:45,215 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-10-22 00:52:45,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:45,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-10-22 00:52:45,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:45,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-10-22 00:52:45,622 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:52:45,625 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:52:45,625 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:52:45,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:52:45,962 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:52:45,997 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:52:45,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:52:45,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:52:46,033 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:52:46,036 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf50d9d0> has no local changes
2025-10-22 00:52:46,036 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:52:46,041 [ scc.git] DEBUG [detached HEAD a840e17] merge master -Dorg -Ssuccess-only
2025-10-22 00:52:46,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:52:46,042 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:52:46,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-10-22 00:52:47,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2025-10-22 00:52:47,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None
2025-10-22 00:52:48,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-22 00:52:48,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:49,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:49,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-22 00:52:50,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:50,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-22 00:52:51,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None
2025-10-22 00:52:51,174 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-10-22 00:52:51,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2025-10-22 00:52:52,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None
2025-10-22 00:52:52,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-22 00:52:53,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:53,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:54,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-22 00:52:54,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:55,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-22 00:52:55,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None
2025-10-22 00:52:55,802 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import'
2025-10-22 00:52:56,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-10-22 00:52:56,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2025-10-22 00:52:57,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-22 00:52:57,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:58,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:52:58,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-22 00:52:59,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:52:59,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-22 00:53:00,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-10-22 00:53:00,318 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-10-22 00:53:00,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-10-22 00:53:01,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-10-22 00:53:01,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-22 00:53:02,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:02,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:53:03,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-22 00:53:03,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:04,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-22 00:53:04,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None
2025-10-22 00:53:04,730 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells'
2025-10-22 00:53:05,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-10-22 00:53:05,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-10-22 00:53:06,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None
2025-10-22 00:53:06,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:07,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:53:07,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None
2025-10-22 00:53:08,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/1021eca1905ab387f732147d78b87429d3897113?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:08,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None
2025-10-22 00:53:09,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/status HTTP/1.1" 200 None
2025-10-22 00:53:09,080 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2025-10-22 00:53:09,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-10-22 00:53:10,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-10-22 00:53:10,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-10-22 00:53:11,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-10-22 00:53:11,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-10-22 00:53:12,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-10-22 00:53:12,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-10-22 00:53:13,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-10-22 00:53:13,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-10-22 00:53:13,594 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:53:13,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-22 00:53:13,594 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:53:13,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:13,596 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:53:13,598 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:53:13,598 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:53:13,602 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:53:13,721 [ scc.git] DEBUG Updating 11d3587..37ea700
2025-10-22 00:53:14,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2025-10-22 00:53:15,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-10-22 00:53:15,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-10-22 00:53:16,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-10-22 00:53:17,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-10-22 00:53:17,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-10-22 00:53:18,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-10-22 00:53:19,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-10-22 00:53:19,212 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head'
2025-10-22 00:53:19,498 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-22 00:53:19,498 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD
2025-10-22 00:53:19,503 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head'
2025-10-22 00:53:20,224 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-22 00:53:20,224 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD
2025-10-22 00:53:20,229 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-10-22 00:53:20,732 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-22 00:53:20,732 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-10-22 00:53:20,736 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head'
2025-10-22 00:53:21,196 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-22 00:53:21,196 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD
2025-10-22 00:53:21,199 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2025-10-22 00:53:21,541 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-22 00:53:21,541 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2025-10-22 00:53:21,545 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:53:21,545 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:53:21,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:21,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1021eca1905ab387f732147d78b87429d3897113'
2025-10-22 00:53:21,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:21,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 1021eca1905ab387f732147d78b87429d3897113'
2025-10-22 00:53:21,562 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:53:21,565 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +-
2025-10-22 00:53:21,565 [ scc.git] DEBUG .isort.cfg | 2 +-
2025-10-22 00:53:21,565 [ scc.git] DEBUG README.rst | 5 +-
2025-10-22 00:53:21,565 [ scc.git] DEBUG setup.py | 5 +-
2025-10-22 00:53:21,566 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 --
2025-10-22 00:53:21,566 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++-
2025-10-22 00:53:21,566 [ scc.git] DEBUG src/omero_zarr/masks.py | 21 ++++---
2025-10-22 00:53:21,566 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 92 ++++++++++++++++++---------
2025-10-22 00:53:21,566 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++--
2025-10-22 00:53:21,566 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++----------
2025-10-22 00:53:21,566 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++-----
2025-10-22 00:53:21,566 [ scc.git] DEBUG 11 files changed, 224 insertions(+), 108 deletions(-)
2025-10-22 00:53:21,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:21,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-22 00:53:21,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:21,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-22 00:53:22,092 [ scc.git] DEBUG Auto-merging README.rst
2025-10-22 00:53:22,092 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-10-22 00:53:22,092 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:53:22,092 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:53:22,095 [ scc.git] DEBUG Calling 'git reset --hard f0fcf2e4ae4708e1a054406c73e14064fc120c95'
2025-10-22 00:53:22,099 [ scc.git] DEBUG HEAD is now at f0fcf2e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-22 00:53:22,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:22,239 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-22 00:53:22,242 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-22 00:53:22,244 [ scc.git] INFO - PR 174 will-moore 'Skip wells'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/masks.py
- src/omero_zarr/cli.py
- src/omero_zarr/raw_pixels.py
- test/integration/clitest/test_export.py
- src/omero_zarr/util.py
--conflicts
2025-10-22 00:53:22,246 [ scc.config] DEBUG Found github.token
2025-10-22 00:53:22,246 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts.
2025-10-22 00:53:22,246 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-22 00:53:22,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:22,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-22 00:53:22,657 [ scc.git] DEBUG Auto-merging CHANGELOG.md
2025-10-22 00:53:22,657 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md
2025-10-22 00:53:22,657 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-10-22 00:53:22,657 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-10-22 00:53:22,657 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-10-22 00:53:22,657 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:53:22,657 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:53:22,660 [ scc.git] DEBUG Calling 'git reset --hard f0fcf2e4ae4708e1a054406c73e14064fc120c95'
2025-10-22 00:53:22,664 [ scc.git] DEBUG HEAD is now at f0fcf2e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-22 00:53:22,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:22,817 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-22 00:53:22,820 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-22 00:53:22,822 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- test/integration/clitest/test_export.py
- PR #174 will-moore 'Skip wells'
- test/integration/clitest/test_export.py
- Upstream changes
- CHANGELOG.md
--conflicts
2025-10-22 00:53:22,824 [ scc.config] DEBUG Found github.token
2025-10-22 00:53:22,824 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2025-10-22 00:53:22,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-22 00:53:22,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:22,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-22 00:53:23,034 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-10-22 00:53:23,034 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-10-22 00:53:23,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2025-10-22 00:53:23,034 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:53:23,035 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:53:23,037 [ scc.git] DEBUG Calling 'git reset --hard f0fcf2e4ae4708e1a054406c73e14064fc120c95'
2025-10-22 00:53:23,041 [ scc.git] DEBUG HEAD is now at f0fcf2e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-22 00:53:23,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:23,206 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-22 00:53:23,208 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-22 00:53:23,210 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/zarr_import.py
--conflicts
2025-10-22 00:53:23,212 [ scc.config] DEBUG Found github.token
2025-10-22 00:53:23,212 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts.
2025-10-22 00:53:23,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-22 00:53:23,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:23,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-22 00:53:23,434 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-10-22 00:53:23,434 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2025-10-22 00:53:23,434 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:53:23,434 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:53:23,437 [ scc.git] DEBUG Calling 'git reset --hard f0fcf2e4ae4708e1a054406c73e14064fc120c95'
2025-10-22 00:53:23,441 [ scc.git] DEBUG HEAD is now at f0fcf2e merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-22 00:53:23,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:23,601 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-22 00:53:23,603 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-22 00:53:23,606 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/zarr_import.py
- PR #181 will-moore 'Add labels support for import'
- src/omero_zarr/zarr_import.py
--conflicts
2025-10-22 00:53:23,608 [ scc.config] DEBUG Found github.token
2025-10-22 00:53:23,608 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts.
2025-10-22 00:53:23,608 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:53:23,643 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:53:23,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:23,645 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:53:23,678 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:53:23,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcafa45d50> has no local changes
2025-10-22 00:53:23,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:53:23,687 [ scc.git] DEBUG [detached HEAD e3a0db2] merge master -Dorg -Ssuccess-only
2025-10-22 00:53:23,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:53:23,687 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:53:24,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-10-22 00:53:24,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/644 HTTP/1.1" 200 None
2025-10-22 00:53:24,734 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:53:25,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82 HTTP/1.1" 200 None
2025-10-22 00:53:25,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:26,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:53:26,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82 HTTP/1.1" 200 None
2025-10-22 00:53:27,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/27227c3f5140c6562210f05588b43e8923856d82?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:53:27,269 [ scc.repo] DEBUG - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2025-10-22 00:53:27,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None
2025-10-22 00:53:28,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None
2025-10-22 00:53:28,231 [ scc.repo] DEBUG # ... Include label: include
2025-10-22 00:53:28,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None
2025-10-22 00:53:29,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:29,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None
2025-10-22 00:53:30,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/deca0590336231198ee955604cc63b333149f7a9?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:53:30,126 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling'
2025-10-22 00:53:30,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-10-22 00:53:31,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-10-22 00:53:31,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-10-22 00:53:32,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-10-22 00:53:32,063 [ scc.repo] DEBUG # ... Include label: include
2025-10-22 00:53:32,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None
2025-10-22 00:53:33,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:33,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None
2025-10-22 00:53:34,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/31d53f83f21d60e0a6d262403f47be360df7fd04?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:53:34,092 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-10-22 00:53:34,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-10-22 00:53:35,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-10-22 00:53:35,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-10-22 00:53:36,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-10-22 00:53:36,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:37,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:53:37,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-10-22 00:53:37,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:53:37,958 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-10-22 00:53:38,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-10-22 00:53:38,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-10-22 00:53:39,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None
2025-10-22 00:53:39,486 [ scc.repo] DEBUG # ... Include label: include
2025-10-22 00:53:40,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e091cd3a87300e56c80b8642bcc7113bf16cb5d HTTP/1.1" 200 None
2025-10-22 00:53:40,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e091cd3a87300e56c80b8642bcc7113bf16cb5d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:40,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e091cd3a87300e56c80b8642bcc7113bf16cb5d HTTP/1.1" 200 None
2025-10-22 00:53:41,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7e091cd3a87300e56c80b8642bcc7113bf16cb5d?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:53:41,364 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-10-22 00:53:41,364 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:53:41,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-22 00:53:41,365 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:53:41,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:41,367 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:53:41,370 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:53:41,370 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:53:41,373 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:53:41,395 [ scc.git] DEBUG Updating 9cc36cde..baab5c06
2025-10-22 00:53:42,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None
2025-10-22 00:53:42,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None
2025-10-22 00:53:43,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None
2025-10-22 00:53:44,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2025-10-22 00:53:44,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-10-22 00:53:45,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-10-22 00:53:46,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-10-22 00:53:46,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-10-22 00:53:47,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-10-22 00:53:47,455 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-10-22 00:53:49,162 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-22 00:53:49,162 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-10-22 00:53:49,165 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-10-22 00:53:49,765 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-22 00:53:49,765 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-10-22 00:53:49,771 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-10-22 00:53:50,205 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-22 00:53:50,205 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-10-22 00:53:50,210 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2025-10-22 00:53:51,250 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-22 00:53:51,250 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2025-10-22 00:53:51,255 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2025-10-22 00:53:51,783 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-22 00:53:51,783 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2025-10-22 00:53:51,787 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:53:51,788 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:53:51,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:51,790 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e091cd3a87300e56c80b8642bcc7113bf16cb5d'
2025-10-22 00:53:51,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:51,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 7e091cd3a87300e56c80b8642bcc7113bf16cb5d'
2025-10-22 00:53:51,827 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-10-22 00:53:51,827 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-10-22 00:53:51,827 [ scc.git] DEBUG Auto-merging src/index.html
2025-10-22 00:53:51,827 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:53:51,836 [ scc.git] DEBUG .gitignore | 2 +
2025-10-22 00:53:51,836 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 300 +++++++-
2025-10-22 00:53:51,836 [ scc.git] DEBUG src/css/figure.css | 18 +-
2025-10-22 00:53:51,836 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/index.html | 44 +-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 210 +++++-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/line.js | 217 +++++-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/point.js | 205 +++++-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 209 +++++-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/rect.js | 214 +++++-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 ++++++++++-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/shape_editor/text.js | 787 +++++++++++++++++++++
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-10-22 00:53:51,837 [ scc.git] DEBUG src/js/views/right_panel_view.js | 120 +++-
2025-10-22 00:53:51,838 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-10-22 00:53:51,838 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 +++++-
2025-10-22 00:53:51,838 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-10-22 00:53:51,838 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-10-22 00:53:51,838 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-10-22 00:53:51,838 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---
2025-10-22 00:53:51,838 [ scc.git] DEBUG 22 files changed, 3349 insertions(+), 235 deletions(-)
2025-10-22 00:53:51,838 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-10-22 00:53:51,838 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-10-22 00:53:51,838 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-10-22 00:53:51,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:51,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-10-22 00:53:51,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:51,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-10-22 00:53:52,001 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:53:52,004 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-10-22 00:53:52,004 [ scc.git] DEBUG README.rst | 4 +-
2025-10-22 00:53:52,004 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-10-22 00:53:52,004 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-10-22 00:53:52,004 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-10-22 00:53:52,004 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-10-22 00:53:52,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:52,385 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-22 00:53:52,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:52,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-22 00:53:53,057 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-10-22 00:53:53,057 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-10-22 00:53:53,057 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-10-22 00:53:53,057 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-10-22 00:53:53,057 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-10-22 00:53:53,058 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:53:53,058 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:53:53,062 [ scc.git] DEBUG Calling 'git reset --hard 1dcd017793eea1d65cb0549d90687779c8c4f659'
2025-10-22 00:53:53,069 [ scc.git] DEBUG HEAD is now at 1dcd0177 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst)
2025-10-22 00:53:53,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:53,298 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-22 00:53:53,302 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3'
2025-10-22 00:53:53,305 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-10-22 00:53:53,307 [ scc.config] DEBUG Found github.token
2025-10-22 00:53:53,307 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-10-22 00:53:53,308 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...deca0590336231198ee955604cc63b333149f7a9'
2025-10-22 00:53:53,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:53,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) deca0590336231198ee955604cc63b333149f7a9'
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js
2025-10-22 00:53:53,799 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:53:53,800 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:53:53,804 [ scc.git] DEBUG Calling 'git reset --hard 1dcd017793eea1d65cb0549d90687779c8c4f659'
2025-10-22 00:53:53,812 [ scc.git] DEBUG HEAD is now at 1dcd0177 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst)
2025-10-22 00:53:53,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:53,954 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 deca0590336231198ee955604cc63b333149f7a9'
2025-10-22 00:53:53,958 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3'
2025-10-22 00:53:53,962 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/shape_editor/shape_manager.js
- src/js/shape_editor/rect.js
--conflicts
2025-10-22 00:53:53,963 [ scc.config] DEBUG Found github.token
2025-10-22 00:53:53,964 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts.
2025-10-22 00:53:53,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...27227c3f5140c6562210f05588b43e8923856d82'
2025-10-22 00:53:53,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:53,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Bump vite from 6.2.6 to 6.4.1) 27227c3f5140c6562210f05588b43e8923856d82'
2025-10-22 00:53:53,989 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:53:53,992 [ scc.git] DEBUG package-lock.json | 92 ++++++++++++++++++++++++++++++++++++++++++++++++++++---
2025-10-22 00:53:53,993 [ scc.git] DEBUG package.json | 2 +-
2025-10-22 00:53:53,993 [ scc.git] DEBUG 2 files changed, 88 insertions(+), 6 deletions(-)
2025-10-22 00:53:54,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:53:54,378 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:53:54,414 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:53:54,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:53:54,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:53:54,450 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:53:54,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf48fa10> has no local changes
2025-10-22 00:53:54,456 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..baab5c06
Previously merged:
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:53:54,463 [ scc.git] DEBUG [detached HEAD 7517283a] merge master -Dorg -Ssuccess-only
2025-10-22 00:53:54,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:53:54,463 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:53:54,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-10-22 00:53:55,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2025-10-22 00:53:55,380 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:53:55,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-10-22 00:53:56,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:53:56,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:53:57,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-10-22 00:53:57,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:53:57,822 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:53:58,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-10-22 00:53:58,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-10-22 00:53:59,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-10-22 00:53:59,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:00,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-10-22 00:54:00,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:00,694 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-10-22 00:54:00,694 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:54:00,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-22 00:54:00,694 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:00,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:00,696 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:54:00,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:54:00,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:54:00,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:54:00,704 [ scc.git] DEBUG Already up to date.
2025-10-22 00:54:00,704 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-10-22 00:54:01,116 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-10-22 00:54:01,116 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-10-22 00:54:01,120 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2025-10-22 00:54:01,407 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-10-22 00:54:01,407 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2025-10-22 00:54:01,412 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:54:01,412 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:01,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:01,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-10-22 00:54:01,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:01,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-10-22 00:54:01,532 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-10-22 00:54:01,533 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:01,535 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-10-22 00:54:01,536 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-10-22 00:54:01,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:01,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-10-22 00:54:01,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:01,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-10-22 00:54:01,754 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:01,756 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:54:01,756 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:54:02,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:02,075 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:54:02,110 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:02,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:02,112 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:54:02,147 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:54:02,150 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf52f6d0> has no local changes
2025-10-22 00:54:02,150 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:54:02,155 [ scc.git] DEBUG [detached HEAD 1f92a55] merge master -Dorg -Ssuccess-only
2025-10-22 00:54:02,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:54:02,156 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:54:02,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-10-22 00:54:03,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-10-22 00:54:03,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-10-22 00:54:04,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-10-22 00:54:04,131 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:04,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-10-22 00:54:05,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:05,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:06,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-10-22 00:54:06,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:06,669 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-10-22 00:54:07,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-10-22 00:54:07,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-10-22 00:54:08,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-10-22 00:54:08,183 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:08,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-10-22 00:54:09,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:09,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:10,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-10-22 00:54:10,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:10,825 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-10-22 00:54:11,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-10-22 00:54:11,307 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:11,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-10-22 00:54:12,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:12,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:13,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-10-22 00:54:13,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:13,895 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-10-22 00:54:14,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-10-22 00:54:14,372 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:14,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-10-22 00:54:15,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:16,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:16,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-10-22 00:54:16,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:16,944 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-10-22 00:54:17,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-10-22 00:54:17,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-10-22 00:54:17,874 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:18,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-10-22 00:54:18,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:19,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:20,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-10-22 00:54:20,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:20,464 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-10-22 00:54:20,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-10-22 00:54:20,951 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:21,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-10-22 00:54:22,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:22,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:23,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-10-22 00:54:23,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:23,482 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-10-22 00:54:23,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-10-22 00:54:23,982 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:24,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-10-22 00:54:25,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:25,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:26,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-10-22 00:54:26,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:26,449 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-10-22 00:54:26,449 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:54:26,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-22 00:54:26,449 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:26,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:26,452 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:54:26,454 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:54:26,454 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:54:26,457 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:54:26,460 [ scc.git] DEBUG Already up to date.
2025-10-22 00:54:26,460 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-10-22 00:54:26,765 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:26,765 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-10-22 00:54:26,769 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-10-22 00:54:27,048 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:27,048 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-10-22 00:54:27,052 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-10-22 00:54:27,336 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:27,336 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-10-22 00:54:27,340 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-10-22 00:54:27,619 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:27,619 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-10-22 00:54:27,623 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-10-22 00:54:27,909 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:27,909 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-10-22 00:54:27,913 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-10-22 00:54:28,190 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:28,190 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-10-22 00:54:28,194 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-10-22 00:54:28,479 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-22 00:54:28,479 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-10-22 00:54:28,483 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:54:28,484 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:28,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:28,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-10-22 00:54:28,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:28,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-10-22 00:54:28,649 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:28,653 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-10-22 00:54:28,654 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-10-22 00:54:28,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:28,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-10-22 00:54:28,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:28,857 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-10-22 00:54:28,999 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:54:28,999 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:29,004 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-10-22 00:54:29,004 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-10-22 00:54:29,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:29,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-22 00:54:29,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:29,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-22 00:54:29,345 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:54:29,345 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-22 00:54:29,345 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:54:29,346 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:54:29,348 [ scc.git] DEBUG Calling 'git reset --hard 18cfd526b71acf9c80b6ee27cdae73efb3472e18'
2025-10-22 00:54:29,353 [ scc.git] DEBUG HEAD is now at 18cfd52 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-10-22 00:54:29,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:29,568 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-22 00:54:29,570 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-22 00:54:29,573 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-10-22 00:54:29,575 [ scc.config] DEBUG Found github.token
2025-10-22 00:54:29,575 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-10-22 00:54:29,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-10-22 00:54:29,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:29,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-10-22 00:54:29,726 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:54:29,727 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:29,732 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-10-22 00:54:29,732 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-10-22 00:54:29,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:29,982 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-10-22 00:54:30,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:30,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-10-22 00:54:30,060 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:54:30,061 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:30,065 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-10-22 00:54:30,065 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-10-22 00:54:30,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:30,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-22 00:54:30,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:30,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-22 00:54:30,475 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:54:30,475 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-22 00:54:30,475 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:54:30,476 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:54:30,478 [ scc.git] DEBUG Calling 'git reset --hard 8192680ffa43f2baa9bf74a15f2922700894e01c'
2025-10-22 00:54:30,482 [ scc.git] DEBUG HEAD is now at 8192680 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-10-22 00:54:30,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:30,771 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-22 00:54:30,773 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-22 00:54:30,776 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-10-22 00:54:30,778 [ scc.config] DEBUG Found github.token
2025-10-22 00:54:30,778 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-10-22 00:54:30,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-22 00:54:30,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:30,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-22 00:54:31,047 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:54:31,047 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-22 00:54:31,047 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:54:31,047 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:54:31,050 [ scc.git] DEBUG Calling 'git reset --hard 8192680ffa43f2baa9bf74a15f2922700894e01c'
2025-10-22 00:54:31,054 [ scc.git] DEBUG HEAD is now at 8192680 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-10-22 00:54:31,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:31,206 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-22 00:54:31,208 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-22 00:54:31,210 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-10-22 00:54:31,212 [ scc.config] DEBUG Found github.token
2025-10-22 00:54:31,212 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-10-22 00:54:31,212 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:54:31,247 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:31,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:31,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:54:31,283 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:54:31,287 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad367d90> has no local changes
2025-10-22 00:54:31,287 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:54:31,293 [ scc.git] DEBUG [detached HEAD 493c6a5] merge master -Dorg -Ssuccess-only
2025-10-22 00:54:31,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:54:31,293 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:54:31,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-10-22 00:54:32,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None
2025-10-22 00:54:32,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-10-22 00:54:33,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-10-22 00:54:33,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-10-22 00:54:34,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-10-22 00:54:34,274 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:34,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-10-22 00:54:35,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:35,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:36,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-10-22 00:54:36,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:36,877 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-10-22 00:54:37,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-10-22 00:54:37,370 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:54:37,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-10-22 00:54:38,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:39,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:39,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-10-22 00:54:40,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:40,277 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-10-22 00:54:40,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-10-22 00:54:41,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-10-22 00:54:41,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-10-22 00:54:42,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-10-22 00:54:42,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-10-22 00:54:43,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:43,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-10-22 00:54:44,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:44,158 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-10-22 00:54:44,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-10-22 00:54:45,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-10-22 00:54:45,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-10-22 00:54:46,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:46,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-10-22 00:54:47,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:47,051 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-10-22 00:54:47,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-10-22 00:54:48,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-10-22 00:54:48,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-10-22 00:54:48,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:49,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-10-22 00:54:49,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:54:49,850 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-10-22 00:54:50,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-10-22 00:54:50,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-10-22 00:54:51,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-10-22 00:54:51,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:54:52,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:54:52,791 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:54:52,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-22 00:54:52,792 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:52,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:52,794 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:54:52,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:54:52,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:54:52,799 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:54:52,806 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-10-22 00:54:53,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-10-22 00:54:53,424 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-10-22 00:54:56,075 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-22 00:54:56,075 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-10-22 00:54:56,079 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-10-22 00:54:57,848 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-22 00:54:57,848 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-10-22 00:54:57,853 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-10-22 00:54:58,175 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-22 00:54:58,175 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-10-22 00:54:58,179 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-10-22 00:54:58,459 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-22 00:54:58,459 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-10-22 00:54:58,463 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-10-22 00:54:58,754 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-22 00:54:58,755 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-10-22 00:54:58,758 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:54:58,758 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:54:58,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:58,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-10-22 00:54:58,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:58,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-10-22 00:54:58,896 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-10-22 00:54:58,896 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-10-22 00:54:58,897 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:58,900 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-10-22 00:54:58,900 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-10-22 00:54:58,900 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-10-22 00:54:59,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:59,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-10-22 00:54:59,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:59,047 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-10-22 00:54:59,206 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-10-22 00:54:59,206 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-10-22 00:54:59,206 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-10-22 00:54:59,206 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-10-22 00:54:59,207 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:59,211 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-10-22 00:54:59,211 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-10-22 00:54:59,211 [ scc.git] DEBUG src/app/header.html | 5 +
2025-10-22 00:54:59,211 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-10-22 00:54:59,211 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-10-22 00:54:59,211 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-10-22 00:54:59,211 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-10-22 00:54:59,211 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-10-22 00:54:59,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:59,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-10-22 00:54:59,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:59,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-10-22 00:54:59,572 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-10-22 00:54:59,573 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:59,576 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-10-22 00:54:59,576 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-10-22 00:54:59,576 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-10-22 00:54:59,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:54:59,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-10-22 00:54:59,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:54:59,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-10-22 00:54:59,975 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:54:59,984 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-10-22 00:54:59,984 [ scc.git] DEBUG package.json | 2 +-
2025-10-22 00:54:59,984 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-10-22 00:55:00,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:00,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-22 00:55:00,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:00,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-22 00:55:00,572 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:55:00,572 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-22 00:55:00,572 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:55:00,572 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:55:00,575 [ scc.git] DEBUG Calling 'git reset --hard 3dcb4a3db75d97bfe0a08acf35f2786d01990d16'
2025-10-22 00:55:00,582 [ scc.git] DEBUG HEAD is now at 3dcb4a3 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-10-22 00:55:00,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:00,724 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-22 00:55:00,726 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-10-22 00:55:00,729 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-10-22 00:55:00,731 [ scc.config] DEBUG Found github.token
2025-10-22 00:55:00,731 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-10-22 00:55:00,731 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:55:00,766 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:00,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:00,768 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:55:00,803 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:55:00,809 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad36bfd0> has no local changes
2025-10-22 00:55:00,809 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:55:00,818 [ scc.git] DEBUG [detached HEAD 247f02e] merge master -Dorg -Ssuccess-only
2025-10-22 00:55:00,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:55:00,818 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:55:01,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-10-22 00:55:01,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2025-10-22 00:55:02,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2025-10-22 00:55:02,234 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:55:02,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-10-22 00:55:03,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:03,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:04,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-10-22 00:55:04,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:04,752 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:55:05,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-10-22 00:55:05,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-10-22 00:55:06,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-10-22 00:55:07,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:07,270 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:55:07,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-10-22 00:55:08,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-10-22 00:55:08,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-10-22 00:55:09,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:09,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-10-22 00:55:10,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:10,219 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-10-22 00:55:10,219 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:55:10,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-22 00:55:10,220 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:10,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:10,222 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:55:10,224 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:55:10,224 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:55:10,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:55:10,243 [ scc.git] DEBUG Already up to date.
2025-10-22 00:55:10,243 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-10-22 00:55:11,093 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-22 00:55:11,093 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-10-22 00:55:11,097 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-10-22 00:55:11,377 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-22 00:55:11,377 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-10-22 00:55:11,380 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2025-10-22 00:55:11,666 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-22 00:55:11,666 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2025-10-22 00:55:11,670 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:55:11,670 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:11,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:11,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-10-22 00:55:11,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:11,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-10-22 00:55:11,738 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:11,740 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-10-22 00:55:11,740 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-10-22 00:55:11,741 [ scc.git] DEBUG requirements.txt | 2 +-
2025-10-22 00:55:11,741 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-10-22 00:55:11,741 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-10-22 00:55:11,741 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-10-22 00:55:11,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:11,879 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-10-22 00:55:11,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:11,884 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-10-22 00:55:11,892 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:11,894 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:55:11,894 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:55:12,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:12,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-22 00:55:12,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:12,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-22 00:55:12,600 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-10-22 00:55:12,600 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2025-10-22 00:55:12,601 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:55:12,601 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:55:12,603 [ scc.git] DEBUG Calling 'git reset --hard c222129e63402032379ba91ad8290d51b5fd6e2f'
2025-10-22 00:55:12,606 [ scc.git] DEBUG HEAD is now at c222129 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2025-10-22 00:55:12,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:12,757 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-22 00:55:12,760 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2025-10-22 00:55:12,762 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2025-10-22 00:55:12,764 [ scc.config] DEBUG Found github.token
2025-10-22 00:55:12,764 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2025-10-22 00:55:12,764 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:55:12,799 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:12,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:12,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:55:12,834 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:55:12,837 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf46fad0> has no local changes
2025-10-22 00:55:12,837 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:55:12,843 [ scc.git] DEBUG [detached HEAD f4da8dd] merge master -Dorg -Ssuccess-only
2025-10-22 00:55:12,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:55:12,843 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:55:13,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-10-22 00:55:14,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-10-22 00:55:14,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-10-22 00:55:15,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-10-22 00:55:15,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:16,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-10-22 00:55:16,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:16,521 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-10-22 00:55:17,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-10-22 00:55:17,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-10-22 00:55:18,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-10-22 00:55:18,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:19,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-10-22 00:55:19,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:19,604 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-10-22 00:55:19,604 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:55:19,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-22 00:55:19,604 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:19,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:19,606 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:55:19,609 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:55:19,609 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:55:19,611 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:55:19,617 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-10-22 00:55:20,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-10-22 00:55:20,277 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-10-22 00:55:20,785 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-10-22 00:55:20,785 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-10-22 00:55:20,789 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-10-22 00:55:21,197 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-10-22 00:55:21,197 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-10-22 00:55:21,201 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:55:21,202 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:21,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:21,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-22 00:55:21,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:21,210 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-22 00:55:21,275 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-10-22 00:55:21,275 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-10-22 00:55:21,275 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-10-22 00:55:21,275 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-10-22 00:55:21,276 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:55:21,276 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:55:21,278 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-22 00:55:21,282 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-22 00:55:21,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:21,421 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-22 00:55:21,425 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-22 00:55:21,427 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2025-10-22 00:55:21,429 [ scc.config] DEBUG Found github.token
2025-10-22 00:55:21,429 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-10-22 00:55:21,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-22 00:55:21,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:21,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-22 00:55:21,481 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-10-22 00:55:21,481 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-10-22 00:55:21,481 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-10-22 00:55:21,482 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:55:21,482 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:55:21,484 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-22 00:55:21,489 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-22 00:55:21,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:21,814 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-22 00:55:21,818 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-22 00:55:21,821 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-10-22 00:55:21,823 [ scc.config] DEBUG Found github.token
2025-10-22 00:55:21,823 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-10-22 00:55:21,823 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:55:21,858 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:21,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:21,859 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:55:21,893 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:55:21,897 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf4abd50> has no local changes
2025-10-22 00:55:21,897 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:55:21,903 [ scc.git] DEBUG [detached HEAD 15bf63e] merge master -Dorg -Ssuccess-only
2025-10-22 00:55:21,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:55:21,903 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:55:22,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-10-22 00:55:22,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-10-22 00:55:23,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-10-22 00:55:23,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:24,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:24,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-10-22 00:55:25,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:25,375 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:55:25,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-10-22 00:55:25,892 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:55:26,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-10-22 00:55:27,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:27,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:28,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-10-22 00:55:28,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:28,514 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-10-22 00:55:29,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-10-22 00:55:29,020 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:55:29,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-10-22 00:55:30,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:30,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:31,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-10-22 00:55:31,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:31,794 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-10-22 00:55:32,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-10-22 00:55:32,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-10-22 00:55:33,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-10-22 00:55:33,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-10-22 00:55:34,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-10-22 00:55:34,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-10-22 00:55:35,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-10-22 00:55:35,324 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:55:35,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-22 00:55:35,324 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:35,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:35,326 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:55:35,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:55:35,328 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:55:35,331 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:55:35,333 [ scc.git] DEBUG Already up to date.
2025-10-22 00:55:35,334 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-10-22 00:55:35,654 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-22 00:55:35,655 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-10-22 00:55:35,658 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-10-22 00:55:35,948 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-22 00:55:35,948 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-10-22 00:55:35,952 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-10-22 00:55:36,296 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-22 00:55:36,296 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-10-22 00:55:36,300 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:55:36,300 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:36,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:36,303 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-10-22 00:55:36,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:36,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-10-22 00:55:36,445 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:36,448 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-10-22 00:55:36,448 [ scc.git] DEBUG package.json | 2 +-
2025-10-22 00:55:36,448 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-10-22 00:55:36,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:36,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-10-22 00:55:36,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:36,648 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-10-22 00:55:36,827 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-22 00:55:36,827 [ scc.git] DEBUG Auto-merging package.json
2025-10-22 00:55:36,827 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:36,830 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-10-22 00:55:36,830 [ scc.git] DEBUG package.json | 2 +-
2025-10-22 00:55:36,830 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-10-22 00:55:37,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:37,009 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-10-22 00:55:37,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:37,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-10-22 00:55:37,021 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:37,023 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:55:37,023 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:55:37,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:37,414 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:55:37,450 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:37,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:37,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:55:37,485 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:55:37,488 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf46d110> has no local changes
2025-10-22 00:55:37,488 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:55:37,494 [ scc.git] DEBUG [detached HEAD 1ded1ea] merge master -Dorg -Ssuccess-only
2025-10-22 00:55:37,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:55:37,494 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:55:37,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2025-10-22 00:55:38,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2025-10-22 00:55:38,424 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:55:38,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-10-22 00:55:39,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:40,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:40,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-10-22 00:55:41,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:41,043 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:55:41,044 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:55:41,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-22 00:55:41,044 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:41,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:41,046 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:55:41,048 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:55:41,048 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:55:41,051 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:55:41,053 [ scc.git] DEBUG Already up to date.
2025-10-22 00:55:41,053 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-10-22 00:55:41,342 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2025-10-22 00:55:41,342 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-10-22 00:55:41,346 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:55:41,346 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:41,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:41,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2025-10-22 00:55:41,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:41,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2025-10-22 00:55:41,359 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:41,362 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:55:41,362 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:55:41,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:41,517 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:55:41,552 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:41,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:41,554 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:55:41,588 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:55:41,591 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad3dffd0> has no local changes
2025-10-22 00:55:41,591 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:55:41,596 [ scc.git] DEBUG [detached HEAD 45ed8b8] merge master -Dorg -Ssuccess-only
2025-10-22 00:55:41,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:55:41,596 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:55:42,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-10-22 00:55:42,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2025-10-22 00:55:42,607 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:55:43,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-22 00:55:43,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:44,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:44,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-22 00:55:45,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:45,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-22 00:55:46,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2025-10-22 00:55:46,145 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:55:46,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-10-22 00:55:47,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-10-22 00:55:47,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-22 00:55:48,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:48,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:49,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-22 00:55:49,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:50,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-22 00:55:50,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-10-22 00:55:50,461 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-10-22 00:55:50,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-10-22 00:55:50,949 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:55:50,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-22 00:55:50,950 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:50,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:50,952 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:55:50,954 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:55:50,954 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:55:50,957 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:55:50,959 [ scc.git] DEBUG Already up to date.
2025-10-22 00:55:50,959 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-10-22 00:55:51,607 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-10-22 00:55:51,607 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-10-22 00:55:51,611 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2025-10-22 00:55:51,895 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-10-22 00:55:51,896 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2025-10-22 00:55:51,899 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:55:51,900 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:51,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:51,902 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-10-22 00:55:51,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:51,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-10-22 00:55:51,913 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:51,916 [ scc.git] DEBUG setup.py | 4 +-
2025-10-22 00:55:51,916 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-10-22 00:55:51,916 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-10-22 00:55:51,916 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-10-22 00:55:52,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:52,056 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2025-10-22 00:55:52,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:52,068 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2025-10-22 00:55:52,075 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:55:52,077 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:55:52,077 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:55:52,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:55:52,445 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:55:52,481 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:52,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:52,483 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:55:52,516 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:55:52,519 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf59e4d0> has no local changes
2025-10-22 00:55:52,519 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:55:52,524 [ scc.git] DEBUG [detached HEAD f0e96d7] merge master -Dorg -Ssuccess-only
2025-10-22 00:55:52,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:55:52,525 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:55:52,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-10-22 00:55:53,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2025-10-22 00:55:53,488 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:55:54,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-10-22 00:55:54,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:55,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:55:55,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-10-22 00:55:55,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:55,978 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:55:56,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-10-22 00:55:56,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-10-22 00:55:57,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-10-22 00:55:57,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:55:58,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-10-22 00:55:58,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:55:58,835 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-10-22 00:55:58,835 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:55:58,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-22 00:55:58,835 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:58,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:58,837 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:55:58,839 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:55:58,839 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:55:58,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:55:58,844 [ scc.git] DEBUG Already up to date.
2025-10-22 00:55:58,844 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-10-22 00:55:59,388 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-10-22 00:55:59,388 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-10-22 00:55:59,392 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-10-22 00:55:59,674 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-10-22 00:55:59,674 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-10-22 00:55:59,678 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:55:59,678 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:55:59,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:59,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-22 00:55:59,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:55:59,685 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-22 00:55:59,964 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-10-22 00:55:59,964 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-10-22 00:55:59,964 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-10-22 00:55:59,964 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-10-22 00:55:59,964 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-10-22 00:55:59,964 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-10-22 00:55:59,964 [ scc.git] DEBUG Auto-merging setup.py
2025-10-22 00:55:59,965 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-10-22 00:55:59,965 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:55:59,965 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:55:59,968 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-10-22 00:55:59,971 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-10-22 00:56:00,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:00,118 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-22 00:56:00,120 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-10-22 00:56:00,123 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- omero_signup/urls.py
- setup.py
- omero_signup/signup_settings.py
--conflicts
2025-10-22 00:56:00,125 [ scc.config] DEBUG Found github.token
2025-10-22 00:56:00,125 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-10-22 00:56:00,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-10-22 00:56:00,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:00,130 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-10-22 00:56:00,136 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:00,138 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:56:00,138 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:56:00,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:00,502 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:00,537 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:00,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:00,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:00,572 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:00,575 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad392dd0> has no local changes
2025-10-22 00:56:00,575 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:00,580 [ scc.git] DEBUG [detached HEAD ce43f14] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:00,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:00,580 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:01,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-10-22 00:56:01,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-10-22 00:56:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-10-22 00:56:02,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:03,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:03,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-10-22 00:56:04,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:04,183 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-10-22 00:56:04,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-10-22 00:56:05,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-10-22 00:56:05,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-10-22 00:56:06,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:06,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:07,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-10-22 00:56:07,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-10-22 00:56:08,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-10-22 00:56:08,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-10-22 00:56:09,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-10-22 00:56:09,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:10,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-10-22 00:56:10,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:10,491 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-10-22 00:56:10,491 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:10,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-22 00:56:10,491 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:10,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:10,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:56:10,496 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:10,496 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:56:10,498 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:56:10,501 [ scc.git] DEBUG Already up to date.
2025-10-22 00:56:10,501 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-10-22 00:56:10,797 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-10-22 00:56:10,797 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-10-22 00:56:10,800 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-10-22 00:56:11,138 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-10-22 00:56:11,138 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-10-22 00:56:11,142 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:11,142 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:11,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:11,144 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-10-22 00:56:11,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:11,150 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-10-22 00:56:11,213 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:11,216 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-10-22 00:56:11,216 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-10-22 00:56:11,217 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-10-22 00:56:11,218 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-10-22 00:56:11,218 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-10-22 00:56:11,218 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-10-22 00:56:11,219 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-10-22 00:56:11,219 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-10-22 00:56:11,219 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-10-22 00:56:11,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:11,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-10-22 00:56:11,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:11,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-10-22 00:56:11,385 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:11,388 [ scc.git] DEBUG docker | 1 +
2025-10-22 00:56:11,388 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-10-22 00:56:11,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:11,769 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:11,805 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:11,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:11,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:11,842 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:11,846 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcb1b93290> has no local changes
2025-10-22 00:56:11,846 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:11,852 [ scc.git] DEBUG [detached HEAD 51a2f3c] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:11,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:11,852 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:12,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2025-10-22 00:56:12,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2025-10-22 00:56:12,819 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:56:13,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-10-22 00:56:13,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:14,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:15,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-10-22 00:56:15,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:15,797 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:56:15,797 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:15,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-22 00:56:15,797 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:15,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:15,799 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:56:15,801 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:15,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:56:15,804 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:56:15,807 [ scc.git] DEBUG Already up to date.
2025-10-22 00:56:15,807 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-10-22 00:56:16,101 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2025-10-22 00:56:16,101 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-10-22 00:56:16,104 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:16,105 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:16,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:16,106 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-10-22 00:56:16,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:16,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-10-22 00:56:16,117 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:16,120 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:56:16,120 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:56:16,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:16,260 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:16,295 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:16,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:16,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:16,331 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:16,334 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad3cffd0> has no local changes
2025-10-22 00:56:16,334 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:16,339 [ scc.git] DEBUG [detached HEAD bb5391b] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:16,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:16,339 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:16,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-10-22 00:56:17,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2025-10-22 00:56:17,285 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:56:17,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-10-22 00:56:18,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:18,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:19,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-10-22 00:56:19,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:19,753 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:56:19,753 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:19,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-22 00:56:19,753 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:19,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:19,756 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:56:19,758 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:19,758 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:56:19,761 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:56:19,767 [ scc.git] DEBUG Updating deab817..160d894
2025-10-22 00:56:20,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-10-22 00:56:20,439 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-10-22 00:56:20,730 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-10-22 00:56:20,730 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-10-22 00:56:20,734 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:20,734 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:20,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:20,736 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-10-22 00:56:20,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:20,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-10-22 00:56:20,747 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:20,749 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:56:20,749 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:56:20,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:20,898 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:20,934 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:20,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:20,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:20,969 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:20,972 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf5ac310> has no local changes
2025-10-22 00:56:20,972 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:20,977 [ scc.git] DEBUG [detached HEAD 6092860] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:20,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:20,978 [ scc.git] INFO Overriding base-branch from master to main
2025-10-22 00:56:20,978 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:21,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-10-22 00:56:21,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2025-10-22 00:56:22,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2025-10-22 00:56:22,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-10-22 00:56:23,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:23,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:24,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-10-22 00:56:24,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:24,779 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2025-10-22 00:56:25,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-10-22 00:56:25,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-10-22 00:56:26,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-10-22 00:56:27,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-10-22 00:56:27,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:27,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-10-22 00:56:28,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:28,410 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-10-22 00:56:28,410 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:28,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-22 00:56:28,411 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:28,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:28,413 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-10-22 00:56:28,415 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:28,415 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-10-22 00:56:28,418 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-10-22 00:56:28,424 [ scc.git] DEBUG Updating 8f3c313..00e0207
2025-10-22 00:56:29,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2025-10-22 00:56:29,064 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-10-22 00:56:29,402 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-10-22 00:56:29,402 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-10-22 00:56:29,406 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2025-10-22 00:56:30,135 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-10-22 00:56:30,135 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2025-10-22 00:56:30,138 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:30,139 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:30,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:30,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-22 00:56:30,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:30,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-22 00:56:30,223 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-10-22 00:56:30,223 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-10-22 00:56:30,223 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-10-22 00:56:30,223 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:56:30,223 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:56:30,225 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-10-22 00:56:30,229 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-10-22 00:56:30,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:30,380 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-22 00:56:30,382 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-10-22 00:56:30,385 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-10-22 00:56:30,387 [ scc.config] DEBUG Found github.token
2025-10-22 00:56:30,387 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-10-22 00:56:30,387 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-10-22 00:56:30,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:30,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-10-22 00:56:30,413 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-10-22 00:56:30,414 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:30,417 [ scc.git] DEBUG README.rst | 3 +
2025-10-22 00:56:30,417 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2025-10-22 00:56:30,417 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2025-10-22 00:56:30,417 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2025-10-22 00:56:30,417 [ scc.git] DEBUG setup.py | 5 +-
2025-10-22 00:56:30,417 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2025-10-22 00:56:30,417 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2025-10-22 00:56:30,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:30,793 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:30,827 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:30,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:30,829 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:30,863 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:30,866 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf58afd0> has no local changes
2025-10-22 00:56:30,866 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:30,871 [ scc.git] DEBUG [detached HEAD 3732cf4] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:30,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:30,871 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:31,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2025-10-22 00:56:31,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2025-10-22 00:56:31,781 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:56:32,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-10-22 00:56:32,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:33,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:33,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-10-22 00:56:34,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:34,395 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:56:34,395 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:34,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-22 00:56:34,396 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:34,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:34,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:56:34,400 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:34,400 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:56:34,402 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:56:34,405 [ scc.git] DEBUG Already up to date.
2025-10-22 00:56:34,405 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2025-10-22 00:56:34,713 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2025-10-22 00:56:34,713 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2025-10-22 00:56:34,717 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:34,718 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:34,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:34,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-10-22 00:56:34,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:34,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-10-22 00:56:34,730 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:34,732 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:56:34,732 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:56:34,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:34,874 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:34,911 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:34,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:34,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:34,947 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:34,950 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad41f7d0> has no local changes
2025-10-22 00:56:34,950 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:34,955 [ scc.git] DEBUG [detached HEAD 9c49fbe] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:34,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:34,956 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:35,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2025-10-22 00:56:36,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2025-10-22 00:56:36,114 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-22 00:56:36,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-10-22 00:56:37,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:37,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:38,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-10-22 00:56:38,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:38,564 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:56:38,564 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:38,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-22 00:56:38,565 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:38,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:38,567 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:56:38,569 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:38,569 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:56:38,572 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:56:38,574 [ scc.git] DEBUG Already up to date.
2025-10-22 00:56:38,574 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2025-10-22 00:56:38,864 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2025-10-22 00:56:38,865 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2025-10-22 00:56:38,868 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:38,868 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:38,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:38,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-10-22 00:56:38,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:38,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-10-22 00:56:38,881 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:38,883 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-22 00:56:38,883 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-22 00:56:39,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:39,027 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:39,063 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:39,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:39,065 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:39,098 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:39,101 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad446850> has no local changes
2025-10-22 00:56:39,101 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:39,107 [ scc.git] DEBUG [detached HEAD a7fde6a] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:39,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:39,107 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:39,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-10-22 00:56:40,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-10-22 00:56:40,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-10-22 00:56:40,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-10-22 00:56:41,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:41,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-10-22 00:56:42,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:42,403 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-10-22 00:56:42,403 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:42,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-22 00:56:42,403 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:42,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:42,405 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-22 00:56:42,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:42,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-22 00:56:42,409 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-22 00:56:42,412 [ scc.git] DEBUG Already up to date.
2025-10-22 00:56:42,412 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-10-22 00:56:42,857 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-10-22 00:56:42,857 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-10-22 00:56:42,861 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:42,861 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:42,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:42,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-22 00:56:42,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:42,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-22 00:56:42,988 [ scc.git] DEBUG Auto-merging Dockerfile
2025-10-22 00:56:42,988 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-10-22 00:56:42,988 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:56:42,988 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:56:42,991 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-10-22 00:56:42,995 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-10-22 00:56:43,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:43,165 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-22 00:56:43,167 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-10-22 00:56:43,170 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-10-22 00:56:43,172 [ scc.config] DEBUG Found github.token
2025-10-22 00:56:43,172 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-10-22 00:56:43,172 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:43,207 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:43,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:43,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:43,242 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:43,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad402f10> has no local changes
2025-10-22 00:56:43,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:43,251 [ scc.git] DEBUG [detached HEAD 11b6fe3] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:43,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:43,251 [ scc.git] INFO Overriding base-branch from master to develop
2025-10-22 00:56:43,251 [ scc.repo] DEBUG ## PRs found:
2025-10-22 00:56:43,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-10-22 00:56:44,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-10-22 00:56:44,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-10-22 00:56:45,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-10-22 00:56:45,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:46,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-22 00:56:46,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-10-22 00:56:47,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:47,076 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-10-22 00:56:47,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-10-22 00:56:48,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-10-22 00:56:48,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-10-22 00:56:48,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-22 00:56:49,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-10-22 00:56:49,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-10-22 00:56:49,830 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-10-22 00:56:50,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-10-22 00:56:50,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-10-22 00:56:51,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-10-22 00:56:51,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-10-22 00:56:51,769 [ scc.repo] DEBUG ## Branches found:
2025-10-22 00:56:51,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-22 00:56:51,769 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:51,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:51,771 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-10-22 00:56:51,773 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-22 00:56:51,773 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-10-22 00:56:51,776 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-10-22 00:56:51,785 [ scc.git] DEBUG Updating 4b4c755..03b9116
2025-10-22 00:56:52,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2025-10-22 00:56:53,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-10-22 00:56:53,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-10-22 00:56:53,687 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-10-22 00:56:54,582 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-10-22 00:56:54,582 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-10-22 00:56:54,586 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-10-22 00:56:55,087 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-10-22 00:56:55,087 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-10-22 00:56:55,091 [ scc.git] DEBUG ## Unique users: []
2025-10-22 00:56:55,091 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:55,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:55,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-22 00:56:55,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:55,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-22 00:56:55,208 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-10-22 00:56:55,208 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-22 00:56:55,208 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-22 00:56:55,211 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5'
2025-10-22 00:56:55,214 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-10-22 00:56:55,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:55,354 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-22 00:56:55,359 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5'
2025-10-22 00:56:55,362 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#564](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-10-22 00:56:55,364 [ scc.config] DEBUG Found github.token
2025-10-22 00:56:55,364 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-10-22 00:56:55,364 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-10-22 00:56:55,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:55,370 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-10-22 00:56:55,378 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-22 00:56:55,381 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-10-22 00:56:55,381 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-10-22 00:56:55,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:55,758 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-22 00:56:55,792 [ scc.git] DEBUG Get sha1 of %s
2025-10-22 00:56:55,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-22 00:56:55,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:55,829 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:56:55,832 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcad3957d0> has no local changes
2025-10-22 00:56:55,832 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:56:55,838 [ scc.git] DEBUG [detached HEAD d8bd2c5] merge master -Dorg -Ssuccess-only
2025-10-22 00:56:55,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:56:55,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-22 00:56:55,904 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-10-22 00:56:56,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:56,154 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-10-22 00:56:56,156 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-10-22 00:56:56,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:56,556 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-10-22 00:56:56,558 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-10-22 00:56:56,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:56,951 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-10-22 00:56:56,953 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-10-22 00:56:57,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:57,343 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-10-22 00:56:57,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:57,748 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-10-22 00:56:57,750 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-10-22 00:56:58,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:58,145 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-10-22 00:56:58,147 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-10-22 00:56:58,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:58,533 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-10-22 00:56:58,535 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-10-22 00:56:58,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:58,929 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-10-22 00:56:58,931 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-10-22 00:56:59,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:59,326 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-10-22 00:56:59,327 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-10-22 00:56:59,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:56:59,720 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-10-22 00:56:59,722 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-10-22 00:57:00,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:00,115 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-10-22 00:57:00,116 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-10-22 00:57:00,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:00,513 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-10-22 00:57:00,515 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-10-22 00:57:00,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:00,908 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-10-22 00:57:01,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:01,320 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-10-22 00:57:01,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:01,716 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-10-22 00:57:01,718 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-10-22 00:57:02,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:02,105 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-10-22 00:57:02,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:02,527 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-10-22 00:57:02,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:02,927 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-10-22 00:57:02,928 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-10-22 00:57:03,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:03,332 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-10-22 00:57:03,334 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-10-22 00:57:03,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:03,750 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-10-22 00:57:03,752 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-10-22 00:57:04,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:04,152 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-10-22 00:57:04,154 [ scc.config] DEBUG Found submodule.scripts.url
2025-10-22 00:57:04,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-22 00:57:04,549 [ scc.config] DEBUG Found submodule.scripts.branch
2025-10-22 00:57:04,549 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-22 00:57:04,623 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdcaf48e710> has local changes
2025-10-22 00:57:04,623 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..baab5c06
Previously merged:
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#564 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/564/)'
2025-10-22 00:57:04,633 [ scc.git] DEBUG [detached HEAD 4ac4484] merge master -Dorg -Ssuccess-only
2025-10-22 00:57:04,633 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-10-22 00:57:04,633 [ scc.merge] INFO Repository: ome/omero-plugins
2025-10-22 00:57:04,633 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,633 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-10-22 00:57:04,634 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-10-22 00:57:04,634 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-10-22 00:57:04,634 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-10-22 00:57:04,634 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-10-22 00:57:04,634 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-10-22 00:57:04,634 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-10-22 00:57:04,634 [ scc.merge] INFO Updating 11d3587..37ea700
2025-10-22 00:57:04,634 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-10-22 00:57:04,634 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:57:04,634 [ scc.merge] INFO
2025-10-22 00:57:04,634 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 174 will-moore 'Skip wells'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Repository: ome/omero-figure
2025-10-22 00:57:04,635 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-10-22 00:57:04,635 [ scc.merge] INFO Updating 9cc36cde..baab5c06
2025-10-22 00:57:04,635 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-10-22 00:57:04,635 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Repository: ome/omero-gallery
2025-10-22 00:57:04,635 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,635 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-10-22 00:57:04,635 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-10-22 00:57:04,635 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-10-22 00:57:04,636 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft)
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-10-22 00:57:04,636 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-10-22 00:57:04,636 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Repository: ome/omero-mapr
2025-10-22 00:57:04,636 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-10-22 00:57:04,636 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Repository: ome/omero-metadata
2025-10-22 00:57:04,636 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-10-22 00:57:04,636 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-10-22 00:57:04,636 [ scc.merge] INFO
2025-10-22 00:57:04,636 [ scc.merge] INFO Repository: ome/omero-parade
2025-10-22 00:57:04,636 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-10-22 00:57:04,636 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-10-22 00:57:04,637 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-10-22 00:57:04,637 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Repository: ome/omero-rois
2025-10-22 00:57:04,637 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-10-22 00:57:04,637 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Repository: ome/omero-signup
2025-10-22 00:57:04,637 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-10-22 00:57:04,637 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-10-22 00:57:04,637 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Repository: ome/omero-upload
2025-10-22 00:57:04,637 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,637 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,637 [ scc.merge] INFO
2025-10-22 00:57:04,637 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-10-22 00:57:04,638 [ scc.merge] INFO Updating deab817..160d894
2025-10-22 00:57:04,638 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-10-22 00:57:04,638 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-10-22 00:57:04,638 [ scc.merge] INFO Updating 8f3c313..00e0207
2025-10-22 00:57:04,638 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-10-22 00:57:04,638 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-10-22 00:57:04,638 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-10-22 00:57:04,638 [ scc.merge] INFO Already up to date.
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Repository: ome/scripts
2025-10-22 00:57:04,638 [ scc.merge] INFO Excluded PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-10-22 00:57:04,638 [ scc.merge] INFO Updating 4b4c755..03b9116
2025-10-22 00:57:04,638 [ scc.merge] INFO Previously merged:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-10-22 00:57:04,638 [ scc.merge] INFO
2025-10-22 00:57:04,638 [ scc.merge] INFO Merged PRs:
2025-10-22 00:57:04,638 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-10-22 00:57:04,639 [ scc.merge] INFO
2025-10-22 00:57:04,639 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-22 00:57:04,639 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-10-22 00:57:04,639 [ scc.merge] INFO
2025-10-22 00:57:04,639 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-22 00:57:04,639 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-22 00:57:04,641 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-22 00:57:04,643 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-22 00:57:04,645 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-22 00:57:04,647 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-22 00:57:04,649 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-22 00:57:04,651 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-22 00:57:04,653 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-22 00:57:04,655 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-22 00:57:04,657 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-22 00:57:04,658 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-22 00:57:04,660 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-22 00:57:04,662 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-22 00:57:04,664 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-22 00:57:04,666 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-22 00:57:04,668 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-22 00:57:04,670 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-22 00:57:04,673 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-22 00:57:04,675 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-22 00:57:04,676 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-22 00:57:04,678 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-22 00:57:04,680 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-22 00:57:04,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-22 00:57:04,682 [ scc.git] DEBUG Calling 'git remote'
2025-10-22 00:57:04,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 54fd3c7] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
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[detached HEAD 843457b] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-22 00:57:52,410 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-22 00:58:01,976 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-22 00:58:04,526 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-22 00:58:09,231 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-22 00:58:48,872 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS