Started by upstream project "Trigger" build number 612
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 541
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.8.3-py3-none-any.whl (161 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.7 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-09-08 00:46:13,337 [ scc.config] DEBUG Found github.token
2025-09-08 00:46:13,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-08 00:46:13,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:13,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:14,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-08 00:46:14,343 [ scc.gh] DEBUG 4746 remaining from 5000 (Reset at 01:09
2025-09-08 00:46:14,343 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:14,346 [ scc.git] DEBUG Check current status
2025-09-08 00:46:14,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:14,349 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-09-08 00:46:14,349 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:14,402 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-08 00:46:14,406 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-08 00:46:14,410 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-08 00:46:14,414 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-09-08 00:46:14,419 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-09-08 00:46:14,422 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-08 00:46:14,426 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-08 00:46:14,430 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-09-08 00:46:14,433 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-08 00:46:14,438 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-09-08 00:46:14,441 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-08 00:46:14,445 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-08 00:46:14,449 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-08 00:46:14,453 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-08 00:46:14,456 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-08 00:46:14,460 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-08 00:46:14,462 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-09-08 00:46:14,466 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-09-08 00:46:14,469 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-08 00:46:14,472 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-08 00:46:14,476 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-08 00:46:14,480 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-09-08 00:46:14,483 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:14,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-09-08 00:46:15,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:15,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:16,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:16,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:16,644 [ scc.git] DEBUG Resetting...
2025-09-08 00:46:16,645 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-08 00:46:16,653 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-09-08 00:46:16,653 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-08 00:46:16,763 [ scc.git] DEBUG Check current status
2025-09-08 00:46:16,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:16,765 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-09-08 00:46:16,765 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:16,813 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-08 00:46:16,817 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-08 00:46:16,821 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-08 00:46:16,825 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-09-08 00:46:16,829 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-09-08 00:46:16,833 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-08 00:46:16,836 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-08 00:46:16,840 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-09-08 00:46:16,844 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-08 00:46:16,848 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-09-08 00:46:16,851 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-08 00:46:16,854 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-08 00:46:16,858 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-08 00:46:16,862 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-08 00:46:16,865 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-08 00:46:16,869 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-08 00:46:16,872 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-09-08 00:46:16,875 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-09-08 00:46:16,878 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-08 00:46:16,881 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-08 00:46:16,884 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-08 00:46:16,888 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-09-08 00:46:16,890 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-09-08 00:46:16,890 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-09-08 00:46:16,890 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-09-08 00:46:16,890 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-09-08 00:46:16,890 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-09-08 00:46:16,890 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:46:17,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-09-08 00:46:17,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-09-08 00:46:17,680 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:46:17,680 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-08 00:46:18,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-09-08 00:46:18,151 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:46:18,151 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-08 00:46:18,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-09-08 00:46:18,645 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:46:18,645 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-08 00:46:18,645 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:46:18,645 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:46:18,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:46:18,648 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:46:18,650 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:46:18,650 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:46:18,653 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:46:18,656 [ scc.git] DEBUG Already up to date.
2025-09-08 00:46:18,656 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-09-08 00:46:18,939 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-08 00:46:18,939 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-09-08 00:46:18,946 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-09-08 00:46:19,238 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-08 00:46:19,238 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-09-08 00:46:19,246 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-09-08 00:46:19,532 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-08 00:46:19,532 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-09-08 00:46:19,539 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:46:19,539 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:46:19,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:46:19,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-08 00:46:19,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:46:19,546 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-08 00:46:19,563 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:46:19,566 [ scc.git] DEBUG scripts | 2 +-
2025-09-08 00:46:19,566 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:46:19,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:19,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-08 00:46:19,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:46:19,723 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-08 00:46:19,741 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:46:19,744 [ scc.git] DEBUG omero-figure | 2 +-
2025-09-08 00:46:19,745 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:46:20,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:20,112 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-08 00:46:20,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:46:20,117 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-08 00:46:20,134 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:46:20,137 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-09-08 00:46:20,137 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:46:20,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:20,508 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:46:20,572 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-09-08 00:46:20,603 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-09-08 00:46:20,619 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-09-08 00:46:20,620 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:46:20,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:46:20,622 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:46:20,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8236226c90> has no local changes
2025-09-08 00:46:20,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:46:20,796 [ scc.git] DEBUG [detached HEAD 511e90a] merge master -Dorg -Snone
2025-09-08 00:46:20,796 [ scc.merge] INFO Repository: ome/omero-plugins
2025-09-08 00:46:20,796 [ scc.merge] INFO Already up to date.
2025-09-08 00:46:20,796 [ scc.merge] INFO
2025-09-08 00:46:20,796 [ scc.merge] INFO Merged PRs:
2025-09-08 00:46:20,796 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-08 00:46:20,796 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-08 00:46:20,796 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-08 00:46:20,796 [ scc.merge] INFO
2025-09-08 00:46:20,796 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-08 00:46:20,796 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb'
Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15'
Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-09-08 00:46:27,988 [ scc.config] DEBUG Found github.token
2025-09-08 00:46:27,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-08 00:46:28,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:28,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:46:28,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-08 00:46:28,977 [ scc.gh] DEBUG 4732 remaining from 5000 (Reset at 01:09
2025-09-08 00:46:28,978 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:28,980 [ scc.git] DEBUG Check current status
2025-09-08 00:46:28,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:28,983 [ scc.git] DEBUG 511e90a merge master -Dorg -Snone
2025-09-08 00:46:28,983 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:29,032 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-08 00:46:29,036 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-08 00:46:29,039 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-08 00:46:29,043 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c)
2025-09-08 00:46:29,048 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc)
2025-09-08 00:46:29,052 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-08 00:46:29,055 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-08 00:46:29,060 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-09-08 00:46:29,063 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-08 00:46:29,067 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-09-08 00:46:29,070 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-08 00:46:29,074 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-08 00:46:29,078 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-08 00:46:29,081 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-08 00:46:29,084 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-08 00:46:29,088 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-08 00:46:29,091 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-09-08 00:46:29,094 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207)
2025-09-08 00:46:29,097 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-08 00:46:29,101 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-08 00:46:29,104 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-08 00:46:29,108 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34)
2025-09-08 00:46:29,111 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:29,111 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-09-08 00:46:29,112 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-09-08 00:46:29,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-09-08 00:46:29,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:30,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:30,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:31,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:31,259 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:31,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-09-08 00:46:31,339 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:31,342 [ scc.git] DEBUG Check current status
2025-09-08 00:46:31,342 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:31,345 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-09-08 00:46:31,345 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:31,386 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:31,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-09-08 00:46:32,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:32,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:33,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:33,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:33,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:33,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:33,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-09-08 00:46:33,614 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:33,617 [ scc.git] DEBUG Check current status
2025-09-08 00:46:33,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:33,619 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-09-08 00:46:33,620 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:33,662 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:34,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-09-08 00:46:34,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:35,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:35,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:35,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:35,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:35,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:35,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-09-08 00:46:35,907 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:35,910 [ scc.git] DEBUG Check current status
2025-09-08 00:46:35,910 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:35,912 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-09-08 00:46:35,913 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:35,955 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:36,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-09-08 00:46:36,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:37,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:37,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:38,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:38,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:38,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:38,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-09-08 00:46:38,116 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:38,118 [ scc.git] DEBUG Check current status
2025-09-08 00:46:38,118 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:38,121 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0
2025-09-08 00:46:38,121 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:38,163 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:38,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-09-08 00:46:39,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:39,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:39,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:40,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:40,280 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:40,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:40,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-09-08 00:46:40,323 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:40,326 [ scc.git] DEBUG Check current status
2025-09-08 00:46:40,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:40,329 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity
2025-09-08 00:46:40,330 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:40,372 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:40,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-09-08 00:46:41,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:41,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:42,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:42,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:42,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:42,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:42,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-09-08 00:46:42,538 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:42,540 [ scc.git] DEBUG Check current status
2025-09-08 00:46:42,540 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:42,543 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-09-08 00:46:42,543 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:42,587 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:43,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-09-08 00:46:43,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:44,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:44,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:44,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:44,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:44,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:44,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-09-08 00:46:44,993 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:44,995 [ scc.git] DEBUG Check current status
2025-09-08 00:46:44,995 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:44,998 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-09-08 00:46:44,998 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:45,040 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:45,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-09-08 00:46:45,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:46,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:46,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:47,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:47,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:47,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:47,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-09-08 00:46:47,280 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:47,283 [ scc.git] DEBUG Check current status
2025-09-08 00:46:47,283 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:47,286 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-09-08 00:46:47,286 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:47,329 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:47,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-09-08 00:46:48,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:48,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:49,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:49,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:49,494 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:49,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:49,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-09-08 00:46:49,536 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:49,538 [ scc.git] DEBUG Check current status
2025-09-08 00:46:49,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:49,541 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-09-08 00:46:49,541 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:49,585 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:50,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-09-08 00:46:50,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:50,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:51,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:51,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:51,735 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:51,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:51,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-09-08 00:46:51,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:51,779 [ scc.git] DEBUG Check current status
2025-09-08 00:46:51,780 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:51,782 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-09-08 00:46:51,782 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:51,825 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:52,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-09-08 00:46:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:53,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:53,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:53,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:53,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:54,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:54,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-09-08 00:46:54,004 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:54,007 [ scc.git] DEBUG Check current status
2025-09-08 00:46:54,007 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:54,010 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-09-08 00:46:54,010 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:54,053 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:54,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-09-08 00:46:54,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:55,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:55,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:56,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:56,270 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:56,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:56,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-09-08 00:46:56,314 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:56,316 [ scc.git] DEBUG Check current status
2025-09-08 00:46:56,316 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:56,318 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-09-08 00:46:56,319 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:56,362 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:56,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-09-08 00:46:57,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:57,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:46:58,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:46:58,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:46:58,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:46:58,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:46:58,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-09-08 00:46:58,565 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:46:58,567 [ scc.git] DEBUG Check current status
2025-09-08 00:46:58,567 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:46:58,570 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-09-08 00:46:58,570 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:46:58,611 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:46:59,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-09-08 00:46:59,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:46:59,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:00,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:00,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:00,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:00,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:00,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-09-08 00:47:00,764 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:00,767 [ scc.git] DEBUG Check current status
2025-09-08 00:47:00,767 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:00,769 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-09-08 00:47:00,769 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:00,810 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:01,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-09-08 00:47:01,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:02,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:02,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:02,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:02,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:03,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:03,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-09-08 00:47:03,023 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:03,025 [ scc.git] DEBUG Check current status
2025-09-08 00:47:03,025 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:03,028 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2025-09-08 00:47:03,028 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:03,070 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:03,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-09-08 00:47:03,423 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-09-08 00:47:03,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-09-08 00:47:04,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:04,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:05,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:05,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:05,431 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:05,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:05,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-09-08 00:47:05,474 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:05,476 [ scc.git] DEBUG Check current status
2025-09-08 00:47:05,476 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:05,479 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-09-08 00:47:05,479 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:05,520 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:05,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-09-08 00:47:06,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:06,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:07,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:07,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:07,686 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:07,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:07,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-09-08 00:47:07,728 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:07,730 [ scc.git] DEBUG Check current status
2025-09-08 00:47:07,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:07,733 [ scc.git] DEBUG 160d894 Fix display of code
2025-09-08 00:47:07,733 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:07,774 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:08,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-09-08 00:47:08,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:09,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:09,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:10,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:10,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:10,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:10,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-09-08 00:47:10,082 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:10,084 [ scc.git] DEBUG Check current status
2025-09-08 00:47:10,084 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:10,086 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-09-08 00:47:10,087 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:10,129 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:10,129 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-09-08 00:47:10,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-09-08 00:47:11,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:11,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:11,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:12,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:12,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:12,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:12,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-09-08 00:47:12,346 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:12,349 [ scc.git] DEBUG Check current status
2025-09-08 00:47:12,349 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:12,351 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-09-08 00:47:12,351 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:12,392 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:12,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-09-08 00:47:12,715 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-09-08 00:47:12,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-09-08 00:47:13,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:14,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:14,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:14,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:14,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:14,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-09-08 00:47:14,789 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:14,791 [ scc.git] DEBUG Check current status
2025-09-08 00:47:14,791 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:14,794 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-09-08 00:47:14,794 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:14,835 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:15,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-09-08 00:47:15,170 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-09-08 00:47:15,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-09-08 00:47:15,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:16,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:16,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:17,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:17,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:17,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:17,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-09-08 00:47:17,243 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:17,245 [ scc.git] DEBUG Check current status
2025-09-08 00:47:17,245 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:17,248 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-09-08 00:47:17,248 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:17,289 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:17,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-09-08 00:47:18,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:18,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:19,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:19,459 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:19,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:19,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-09-08 00:47:19,498 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-08 00:47:19,500 [ scc.git] DEBUG Check current status
2025-09-08 00:47:19,500 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:19,503 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-09-08 00:47:19,503 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:19,544 [ scc.config] DEBUG Found remote.origin.url
2025-09-08 00:47:19,544 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-09-08 00:47:19,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-08 00:47:19,891 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-08 00:47:20,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-09-08 00:47:20,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-08 00:47:21,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-08 00:47:21,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-08 00:47:21,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-08 00:47:21,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:21,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:21,925 [ scc.git] DEBUG Resetting...
2025-09-08 00:47:21,925 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-08 00:47:21,933 [ scc.git] DEBUG HEAD is now at 511e90a merge master -Dorg -Snone
2025-09-08 00:47:21,933 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-08 00:47:21,997 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-09-08 00:47:22,018 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-09-08 00:47:22,043 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-09-08 00:47:22,060 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-09-08 00:47:22,091 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-09-08 00:47:22,104 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-09-08 00:47:22,130 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-09-08 00:47:22,134 [ scc.git] DEBUG Check current status
2025-09-08 00:47:22,134 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-08 00:47:22,136 [ scc.git] DEBUG 511e90a merge master -Dorg -Snone
2025-09-08 00:47:22,137 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-08 00:47:22,184 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-08 00:47:22,188 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-08 00:47:22,192 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-08 00:47:22,195 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-09-08 00:47:22,200 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-09-08 00:47:22,203 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-08 00:47:22,207 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-08 00:47:22,212 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-09-08 00:47:22,215 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-08 00:47:22,218 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-09-08 00:47:22,222 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-08 00:47:22,225 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-08 00:47:22,229 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-08 00:47:22,232 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-08 00:47:22,236 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-08 00:47:22,239 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-08 00:47:22,242 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-09-08 00:47:22,245 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-09-08 00:47:22,248 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-08 00:47:22,251 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-08 00:47:22,254 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-08 00:47:22,259 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-09-08 00:47:22,259 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-09-08 00:47:22,259 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-09-08 00:47:22,260 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-09-08 00:47:22,260 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-09-08 00:47:22,260 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-09-08 00:47:22,260 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-09-08 00:47:22,260 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:47:22,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-09-08 00:47:22,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-09-08 00:47:22,973 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:47:23,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-09-08 00:47:24,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:24,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-09-08 00:47:25,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:25,010 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-08 00:47:25,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-09-08 00:47:25,503 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:47:26,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-09-08 00:47:26,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:27,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-09-08 00:47:27,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:27,450 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-08 00:47:27,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-09-08 00:47:27,933 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:47:28,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-09-08 00:47:28,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:29,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-09-08 00:47:29,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:29,908 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-08 00:47:29,908 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:47:29,908 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:29,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:29,910 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:47:29,913 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:47:29,913 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:47:29,916 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:47:29,919 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:29,919 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-09-08 00:47:30,212 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-08 00:47:30,212 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-09-08 00:47:30,219 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-09-08 00:47:30,498 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-08 00:47:30,498 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-09-08 00:47:30,505 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-09-08 00:47:30,787 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-08 00:47:30,787 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-09-08 00:47:30,794 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:47:30,794 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:30,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:30,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-08 00:47:30,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:30,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-08 00:47:30,804 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:30,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:30,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-08 00:47:30,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:30,947 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-08 00:47:30,949 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:31,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:31,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-08 00:47:31,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:31,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-08 00:47:31,350 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:31,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:31,736 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:47:31,790 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:31,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:31,793 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:47:32,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-09-08 00:47:32,171 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:47:32,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-09-08 00:47:32,171 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:32,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:32,173 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:47:32,176 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:47:32,176 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:47:32,179 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:47:32,182 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:32,182 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:47:32,182 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:32,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:32,184 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:47:32,223 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:32,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:32,225 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:32,265 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:47:32,268 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa18247d050> has no local changes
2025-09-08 00:47:32,268 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:47:32,274 [ scc.git] DEBUG [detached HEAD 6d5f100] merge master -Dorg -Ssuccess-only
2025-09-08 00:47:32,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:32,275 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:47:32,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-09-08 00:47:33,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2025-09-08 00:47:33,213 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:47:33,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-09-08 00:47:34,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:34,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:47:35,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-09-08 00:47:35,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:35,845 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:47:36,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-09-08 00:47:36,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-09-08 00:47:36,804 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:47:36,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-09-08 00:47:36,804 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:36,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:36,807 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:47:36,810 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:47:36,810 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:47:36,813 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:47:36,816 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:36,816 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2025-09-08 00:47:37,095 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2025-09-08 00:47:37,095 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2025-09-08 00:47:37,100 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:47:37,100 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:37,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:37,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-09-08 00:47:37,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:37,107 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-09-08 00:47:37,115 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:47:37,117 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:47:37,117 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:47:37,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:37,269 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:47:37,309 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:37,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:37,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:37,351 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:47:37,354 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa182453510> has no local changes
2025-09-08 00:47:37,355 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:47:37,361 [ scc.git] DEBUG [detached HEAD 9f3ac43] merge master -Dorg -Ssuccess-only
2025-09-08 00:47:37,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:37,361 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:47:37,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-09-08 00:47:38,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None
2025-09-08 00:47:38,357 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:47:38,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-09-08 00:47:39,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:39,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:47:40,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-09-08 00:47:40,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:40,935 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:47:41,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-09-08 00:47:41,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-09-08 00:47:42,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:42,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-09-08 00:47:43,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:43,339 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-09-08 00:47:43,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-09-08 00:47:44,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-09-08 00:47:44,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-09-08 00:47:45,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:45,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:47:46,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-09-08 00:47:46,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:46,750 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-09-08 00:47:47,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-09-08 00:47:47,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-09-08 00:47:48,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-09-08 00:47:48,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:49,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:47:49,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-09-08 00:47:50,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:47:50,183 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-09-08 00:47:50,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-09-08 00:47:51,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-09-08 00:47:51,109 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:47:51,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-09-08 00:47:51,109 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:51,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:51,112 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:47:51,115 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:47:51,115 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:47:51,118 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:47:51,121 [ scc.git] DEBUG Already up to date.
2025-09-08 00:47:51,121 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-09-08 00:47:51,406 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-08 00:47:51,406 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-09-08 00:47:51,411 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-09-08 00:47:51,686 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-08 00:47:51,687 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-09-08 00:47:51,691 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-09-08 00:47:51,967 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-08 00:47:51,968 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-09-08 00:47:51,973 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head'
2025-09-08 00:47:52,248 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-08 00:47:52,249 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD
2025-09-08 00:47:52,253 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:47:52,253 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:52,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:52,256 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-09-08 00:47:52,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:52,262 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-09-08 00:47:52,271 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:47:52,274 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-09-08 00:47:52,274 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-09-08 00:47:52,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:52,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-09-08 00:47:52,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:52,423 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-09-08 00:47:52,433 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-09-08 00:47:52,434 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:47:52,438 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-09-08 00:47:52,438 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-09-08 00:47:52,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:52,826 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-09-08 00:47:52,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:52,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-09-08 00:47:52,843 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-09-08 00:47:52,844 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:47:52,848 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-09-08 00:47:52,848 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-09-08 00:47:53,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:53,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-09-08 00:47:53,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:53,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-09-08 00:47:53,243 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:47:53,246 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:47:53,246 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:47:53,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:47:53,655 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:47:53,697 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:47:53,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:47:53,700 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:47:53,741 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:47:53,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa182538d50> has no local changes
2025-09-08 00:47:53,745 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:47:53,752 [ scc.git] DEBUG [detached HEAD 9dbf8ef] merge master -Dorg -Ssuccess-only
2025-09-08 00:47:53,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:47:53,752 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:47:54,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-09-08 00:47:54,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None
2025-09-08 00:47:55,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None
2025-09-08 00:47:55,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None
2025-09-08 00:47:56,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:56,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:47:57,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None
2025-09-08 00:47:57,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b8c63a5b03b25b3a39748b27729f50d97a5385de?per_page=1 HTTP/1.1" 200 None
2025-09-08 00:47:58,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de HTTP/1.1" 200 None
2025-09-08 00:47:58,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b8c63a5b03b25b3a39748b27729f50d97a5385de/status HTTP/1.1" 200 None
2025-09-08 00:47:58,640 [ scc.repo] DEBUG - PR 180 will-moore 'Register command'
2025-09-08 00:47:59,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-09-08 00:47:59,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2025-09-08 00:48:00,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-09-08 00:48:00,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:01,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:01,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-09-08 00:48:01,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:02,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-09-08 00:48:02,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-09-08 00:48:02,877 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-09-08 00:48:03,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-09-08 00:48:03,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-09-08 00:48:04,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-09-08 00:48:04,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-09-08 00:48:05,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-09-08 00:48:05,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-09-08 00:48:06,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-09-08 00:48:06,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-09-08 00:48:07,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-09-08 00:48:07,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-09-08 00:48:08,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-09-08 00:48:08,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-09-08 00:48:09,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-09-08 00:48:09,257 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:48:09,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-09-08 00:48:09,258 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:09,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:09,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:48:09,263 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:48:09,263 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:48:09,267 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:48:09,281 [ scc.git] DEBUG Updating 11d3587..f7eea7c
2025-09-08 00:48:09,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-09-08 00:48:10,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-09-08 00:48:11,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-09-08 00:48:12,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-09-08 00:48:12,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-09-08 00:48:13,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-09-08 00:48:14,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-09-08 00:48:14,216 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-09-08 00:48:14,512 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-09-08 00:48:14,512 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-09-08 00:48:14,517 [ scc.git] DEBUG Calling 'git fetch origin pull/180/head'
2025-09-08 00:48:14,806 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-09-08 00:48:14,806 [ scc.git] DEBUG * branch refs/pull/180/head -> FETCH_HEAD
2025-09-08 00:48:14,811 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:48:14,811 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:14,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:14,813 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-09-08 00:48:14,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:14,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-09-08 00:48:14,829 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:14,833 [ scc.git] DEBUG CHANGELOG.md | 4 ++--
2025-09-08 00:48:14,833 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------
2025-09-08 00:48:14,833 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++--------------
2025-09-08 00:48:14,833 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-)
2025-09-08 00:48:14,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:14,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c63a5b03b25b3a39748b27729f50d97a5385de'
2025-09-08 00:48:14,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:14,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 180 (Register command) b8c63a5b03b25b3a39748b27729f50d97a5385de'
2025-09-08 00:48:14,992 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-09-08 00:48:14,993 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:14,997 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +-
2025-09-08 00:48:14,997 [ scc.git] DEBUG .isort.cfg | 2 +-
2025-09-08 00:48:14,997 [ scc.git] DEBUG src/omero_zarr/cli.py | 55 +++
2025-09-08 00:48:14,997 [ scc.git] DEBUG src/omero_zarr/import_xml.py | 146 ++++++
2025-09-08 00:48:14,997 [ scc.git] DEBUG src/omero_zarr/register.py | 717 ++++++++++++++++++++++++++++++
2025-09-08 00:48:14,997 [ scc.git] DEBUG test/integration/clitest/test_register.py | 165 +++++++
2025-09-08 00:48:14,997 [ scc.git] DEBUG 6 files changed, 1087 insertions(+), 3 deletions(-)
2025-09-08 00:48:14,997 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_xml.py
2025-09-08 00:48:14,997 [ scc.git] DEBUG create mode 100644 src/omero_zarr/register.py
2025-09-08 00:48:14,997 [ scc.git] DEBUG create mode 100644 test/integration/clitest/test_register.py
2025-09-08 00:48:15,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:15,382 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:48:15,425 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:15,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:15,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:48:15,467 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:48:15,471 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1824cee50> has no local changes
2025-09-08 00:48:15,471 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 180 will-moore 'Register command'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:48:15,478 [ scc.git] DEBUG [detached HEAD 72103d4] merge master -Dorg -Ssuccess-only
2025-09-08 00:48:15,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:48:15,478 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:48:16,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-09-08 00:48:16,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-09-08 00:48:16,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-09-08 00:48:17,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None
2025-09-08 00:48:17,454 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:48:18,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None
2025-09-08 00:48:18,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:19,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:19,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None
2025-09-08 00:48:20,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:20,016 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-09-08 00:48:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-09-08 00:48:20,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-09-08 00:48:20,971 [ scc.repo] DEBUG # ... Include label: include
2025-09-08 00:48:21,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None
2025-09-08 00:48:22,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:22,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None
2025-09-08 00:48:22,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:22,948 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-09-08 00:48:23,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None
2025-09-08 00:48:23,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None
2025-09-08 00:48:24,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-09-08 00:48:25,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:25,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:25,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-09-08 00:48:26,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:26,406 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-09-08 00:48:26,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-09-08 00:48:27,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None
2025-09-08 00:48:27,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None
2025-09-08 00:48:27,858 [ scc.repo] DEBUG # ... Include label: include
2025-09-08 00:48:28,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None
2025-09-08 00:48:28,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:29,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None
2025-09-08 00:48:29,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:29,846 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border'
2025-09-08 00:48:30,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None
2025-09-08 00:48:30,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None
2025-09-08 00:48:31,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-09-08 00:48:31,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:32,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:32,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-09-08 00:48:33,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:33,303 [ scc.repo] DEBUG - PR 612 will-moore 'Script version'
2025-09-08 00:48:33,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-09-08 00:48:34,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-09-08 00:48:34,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-09-08 00:48:35,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:35,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:36,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-09-08 00:48:36,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:36,600 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-09-08 00:48:37,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None
2025-09-08 00:48:37,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None
2025-09-08 00:48:38,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None
2025-09-08 00:48:38,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:39,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:39,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None
2025-09-08 00:48:40,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:40,005 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature'
2025-09-08 00:48:40,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-09-08 00:48:40,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-09-08 00:48:40,948 [ scc.repo] DEBUG # ... Include label: include
2025-09-08 00:48:41,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None
2025-09-08 00:48:41,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:42,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None
2025-09-08 00:48:42,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:42,808 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-09-08 00:48:42,808 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:48:42,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-09-08 00:48:42,809 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:42,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:42,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:48:42,815 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:48:42,816 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:48:42,820 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:48:42,836 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc
2025-09-08 00:48:43,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-09-08 00:48:44,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-09-08 00:48:44,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-09-08 00:48:45,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-09-08 00:48:46,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-09-08 00:48:46,083 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-09-08 00:48:46,368 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:46,369 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-09-08 00:48:46,373 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head'
2025-09-08 00:48:46,658 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:46,658 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD
2025-09-08 00:48:46,663 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-09-08 00:48:46,947 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:46,947 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-09-08 00:48:46,951 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-09-08 00:48:47,246 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:47,246 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-09-08 00:48:47,251 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-09-08 00:48:47,538 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:47,539 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-09-08 00:48:47,543 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head'
2025-09-08 00:48:47,833 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:47,833 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD
2025-09-08 00:48:47,838 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-09-08 00:48:48,131 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:48,131 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-09-08 00:48:48,136 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head'
2025-09-08 00:48:48,413 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-08 00:48:48,414 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD
2025-09-08 00:48:48,418 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:48:48,419 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:48,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:48,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25'
2025-09-08 00:48:48,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:48,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25'
2025-09-08 00:48:48,451 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:48,461 [ scc.git] DEBUG .gitignore | 2 +
2025-09-08 00:48:48,461 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/css/figure.css | 20 +-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/index.html | 34 +-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++-
2025-09-08 00:48:48,462 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-09-08 00:48:48,463 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++----
2025-09-08 00:48:48,463 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-)
2025-09-08 00:48:48,463 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-09-08 00:48:48,463 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-09-08 00:48:48,463 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-09-08 00:48:48,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:48,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895'
2025-09-08 00:48:48,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:48,627 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895'
2025-09-08 00:48:48,659 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-08 00:48:48,659 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-09-08 00:48:48,659 [ scc.git] DEBUG Auto-merging src/index.html
2025-09-08 00:48:48,659 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2025-09-08 00:48:48,659 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-09-08 00:48:48,659 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-09-08 00:48:48,660 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:48,667 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++--
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/css/figure.css | 133 ++++++-
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/index.html | 4 +
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++--
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++--
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++-
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 +
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++
2025-09-08 00:48:48,667 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++
2025-09-08 00:48:48,667 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-)
2025-09-08 00:48:48,667 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js
2025-09-08 00:48:48,667 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html
2025-09-08 00:48:48,667 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html
2025-09-08 00:48:49,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:49,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-09-08 00:48:49,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:49,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-09-08 00:48:49,057 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:49,060 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-09-08 00:48:49,060 [ scc.git] DEBUG README.rst | 4 +-
2025-09-08 00:48:49,060 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-09-08 00:48:49,061 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-09-08 00:48:49,061 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-09-08 00:48:49,061 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-09-08 00:48:49,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:49,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-09-08 00:48:49,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:49,429 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-09-08 00:48:49,456 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-08 00:48:49,456 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:48:49,456 [ scc.git] DEBUG Auto-merging package.json
2025-09-08 00:48:49,456 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-09-08 00:48:49,456 [ scc.git] DEBUG Auto-merging src/index.html
2025-09-08 00:48:49,457 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:49,465 [ scc.git] DEBUG .bumpversion.cfg | 2 +
2025-09-08 00:48:49,465 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +-
2025-09-08 00:48:49,465 [ scc.git] DEBUG omero_figure/urls.py | 3 +
2025-09-08 00:48:49,465 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++
2025-09-08 00:48:49,465 [ scc.git] DEBUG package-lock.json | 8 +-
2025-09-08 00:48:49,465 [ scc.git] DEBUG package.json | 3 +-
2025-09-08 00:48:49,465 [ scc.git] DEBUG src/css/figure.css | 2 +-
2025-09-08 00:48:49,465 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++
2025-09-08 00:48:49,465 [ scc.git] DEBUG src/index.html | 20 +++--
2025-09-08 00:48:49,465 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++
2025-09-08 00:48:49,465 [ scc.git] DEBUG vite.config.js | 3 +
2025-09-08 00:48:49,465 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-)
2025-09-08 00:48:49,465 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html
2025-09-08 00:48:49,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:49,817 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363'
2025-09-08 00:48:49,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:49,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363'
2025-09-08 00:48:49,854 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-08 00:48:49,854 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2025-09-08 00:48:49,854 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-09-08 00:48:49,854 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js
2025-09-08 00:48:49,854 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:48:49,855 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:48:49,860 [ scc.git] DEBUG Calling 'git reset --hard 1be772b856558c6c318bb01c996b079b7e9e3444'
2025-09-08 00:48:49,870 [ scc.git] DEBUG HEAD is now at 1be772b8 merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-09-08 00:48:50,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:50,223 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363'
2025-09-08 00:48:50,227 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2'
2025-09-08 00:48:50,231 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/panel_view.js
- PR #605 Tom-TBT 'Colorbar feature'
- src/js/views/panel_view.js
--conflicts
2025-09-08 00:48:50,233 [ scc.config] DEBUG Found github.token
2025-09-08 00:48:50,233 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts.
2025-09-08 00:48:50,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29'
2025-09-08 00:48:50,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:50,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-09-08 00:48:50,261 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-09-08 00:48:50,261 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js
2025-09-08 00:48:50,262 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:48:50,262 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:48:50,266 [ scc.git] DEBUG Calling 'git reset --hard 1be772b856558c6c318bb01c996b079b7e9e3444'
2025-09-08 00:48:50,272 [ scc.git] DEBUG HEAD is now at 1be772b8 merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-09-08 00:48:50,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:50,611 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-09-08 00:48:50,616 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2'
2025-09-08 00:48:50,620 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/right_panel_view.js
- PR #605 Tom-TBT 'Colorbar feature'
- src/js/views/right_panel_view.js
--conflicts
2025-09-08 00:48:50,622 [ scc.config] DEBUG Found github.token
2025-09-08 00:48:50,622 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts.
2025-09-08 00:48:50,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e'
2025-09-08 00:48:50,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:50,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e'
2025-09-08 00:48:50,658 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-08 00:48:50,659 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-09-08 00:48:50,659 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-09-08 00:48:50,659 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-09-08 00:48:50,659 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-09-08 00:48:50,659 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:48:50,659 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:48:50,664 [ scc.git] DEBUG Calling 'git reset --hard 1be772b856558c6c318bb01c996b079b7e9e3444'
2025-09-08 00:48:50,673 [ scc.git] DEBUG HEAD is now at 1be772b8 merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-09-08 00:48:51,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:51,006 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e'
2025-09-08 00:48:51,010 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2'
2025-09-08 00:48:51,014 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-09-08 00:48:51,016 [ scc.config] DEBUG Found github.token
2025-09-08 00:48:51,016 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-09-08 00:48:51,016 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf'
2025-09-08 00:48:51,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:51,027 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf'
2025-09-08 00:48:51,042 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:48:51,042 [ scc.git] DEBUG Auto-merging package.json
2025-09-08 00:48:51,044 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:51,048 [ scc.git] DEBUG package-lock.json | 8 ++++----
2025-09-08 00:48:51,048 [ scc.git] DEBUG package.json | 2 +-
2025-09-08 00:48:51,048 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2025-09-08 00:48:51,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:51,396 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:48:51,441 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:51,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:51,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:48:51,484 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:48:51,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1824b82d0> has no local changes
2025-09-08 00:48:51,490 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:48:51,499 [ scc.git] DEBUG [detached HEAD d0955d3a] merge master -Dorg -Ssuccess-only
2025-09-08 00:48:51,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:48:51,500 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:48:51,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-09-08 00:48:52,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2025-09-08 00:48:52,484 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:48:53,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-09-08 00:48:53,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:48:54,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-09-08 00:48:54,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:54,984 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:48:55,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-09-08 00:48:55,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-09-08 00:48:56,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-09-08 00:48:56,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:48:57,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-09-08 00:48:57,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:48:57,826 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-09-08 00:48:57,826 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:48:57,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-09-08 00:48:57,826 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:57,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:57,829 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:48:57,832 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:48:57,832 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:48:57,835 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:48:57,838 [ scc.git] DEBUG Already up to date.
2025-09-08 00:48:57,838 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-09-08 00:48:58,133 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-09-08 00:48:58,133 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-09-08 00:48:58,137 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2025-09-08 00:48:58,414 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-09-08 00:48:58,414 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2025-09-08 00:48:58,418 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:48:58,418 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:58,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:58,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-09-08 00:48:58,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:58,426 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-09-08 00:48:58,434 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-09-08 00:48:58,435 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:58,438 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-09-08 00:48:58,438 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-09-08 00:48:58,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:58,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-09-08 00:48:58,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:58,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-09-08 00:48:58,646 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:48:58,648 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:48:58,649 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:48:59,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:48:59,040 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:48:59,080 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:48:59,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:48:59,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:48:59,122 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:48:59,125 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1812eda90> has no local changes
2025-09-08 00:48:59,125 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:48:59,132 [ scc.git] DEBUG [detached HEAD 43d17e5] merge master -Dorg -Ssuccess-only
2025-09-08 00:48:59,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:48:59,132 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:48:59,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-09-08 00:49:00,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-09-08 00:49:00,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-09-08 00:49:00,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-09-08 00:49:00,977 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:01,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-09-08 00:49:02,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:02,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:03,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-09-08 00:49:03,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:03,636 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-09-08 00:49:04,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-09-08 00:49:04,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-09-08 00:49:05,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-09-08 00:49:05,180 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:05,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-09-08 00:49:06,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:06,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:07,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-09-08 00:49:07,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:07,622 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-09-08 00:49:08,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-09-08 00:49:08,118 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:08,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-09-08 00:49:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:09,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:10,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-09-08 00:49:10,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:10,535 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-09-08 00:49:11,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-09-08 00:49:11,065 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:11,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-09-08 00:49:12,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:12,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:13,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-09-08 00:49:13,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:13,560 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-09-08 00:49:14,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-09-08 00:49:14,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-09-08 00:49:14,505 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:15,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-09-08 00:49:15,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:16,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:16,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-09-08 00:49:17,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:17,089 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-09-08 00:49:17,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-09-08 00:49:17,561 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:18,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-09-08 00:49:18,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:19,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:19,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-09-08 00:49:20,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:20,202 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-09-08 00:49:20,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-09-08 00:49:20,693 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:21,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-09-08 00:49:21,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:22,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:22,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-09-08 00:49:23,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:23,347 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-09-08 00:49:23,347 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:49:23,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-09-08 00:49:23,347 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:49:23,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:23,350 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:49:23,353 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:49:23,353 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:49:23,356 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:49:23,359 [ scc.git] DEBUG Already up to date.
2025-09-08 00:49:23,359 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-09-08 00:49:23,651 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:23,651 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-09-08 00:49:23,656 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-09-08 00:49:23,933 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:23,933 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-09-08 00:49:23,938 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-09-08 00:49:24,215 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:24,215 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-09-08 00:49:24,220 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-09-08 00:49:24,498 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:24,498 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-09-08 00:49:24,503 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-09-08 00:49:24,782 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:24,782 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-09-08 00:49:24,787 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-09-08 00:49:25,071 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:25,071 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-09-08 00:49:25,076 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-09-08 00:49:25,376 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-08 00:49:25,376 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-09-08 00:49:25,381 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:49:25,381 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:49:25,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:25,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-09-08 00:49:25,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:25,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-09-08 00:49:25,398 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:25,403 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-09-08 00:49:25,403 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-09-08 00:49:25,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:25,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-09-08 00:49:25,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:25,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-09-08 00:49:25,617 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:25,618 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:25,623 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-09-08 00:49:25,623 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-09-08 00:49:25,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:25,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-09-08 00:49:25,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:25,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-09-08 00:49:26,011 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:26,011 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-08 00:49:26,011 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:49:26,012 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:49:26,014 [ scc.git] DEBUG Calling 'git reset --hard 107f056884874a149ba1d2354704b48b0c8ea259'
2025-09-08 00:49:26,019 [ scc.git] DEBUG HEAD is now at 107f056 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-09-08 00:49:26,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:26,393 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-09-08 00:49:26,396 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-09-08 00:49:26,398 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-09-08 00:49:26,400 [ scc.config] DEBUG Found github.token
2025-09-08 00:49:26,400 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-09-08 00:49:26,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-09-08 00:49:26,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:26,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-09-08 00:49:26,422 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:26,423 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:26,428 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-09-08 00:49:26,428 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-09-08 00:49:26,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:26,825 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-09-08 00:49:26,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:26,830 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-09-08 00:49:26,848 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:26,849 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:26,854 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-09-08 00:49:26,854 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-09-08 00:49:27,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:27,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-09-08 00:49:27,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:27,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-09-08 00:49:27,252 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:27,252 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-08 00:49:27,252 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:49:27,253 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:49:27,255 [ scc.git] DEBUG Calling 'git reset --hard e419597c4119d1b7c311a807066193e8141d893a'
2025-09-08 00:49:27,260 [ scc.git] DEBUG HEAD is now at e419597 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-09-08 00:49:27,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:27,627 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-09-08 00:49:27,630 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-09-08 00:49:27,633 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-09-08 00:49:27,635 [ scc.config] DEBUG Found github.token
2025-09-08 00:49:27,635 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-09-08 00:49:27,635 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-09-08 00:49:27,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:27,640 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-09-08 00:49:27,659 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:27,659 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-08 00:49:27,660 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:49:27,660 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:49:27,663 [ scc.git] DEBUG Calling 'git reset --hard e419597c4119d1b7c311a807066193e8141d893a'
2025-09-08 00:49:27,668 [ scc.git] DEBUG HEAD is now at e419597 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-09-08 00:49:28,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:28,029 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-09-08 00:49:28,032 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-09-08 00:49:28,035 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-09-08 00:49:28,038 [ scc.config] DEBUG Found github.token
2025-09-08 00:49:28,038 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-09-08 00:49:28,038 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:49:28,079 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:49:28,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:28,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:49:28,122 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:49:28,126 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa182429450> has no local changes
2025-09-08 00:49:28,127 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:49:28,133 [ scc.git] DEBUG [detached HEAD 69d5127] merge master -Dorg -Ssuccess-only
2025-09-08 00:49:28,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:49:28,134 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:49:28,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-09-08 00:49:29,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-09-08 00:49:29,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-09-08 00:49:30,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-09-08 00:49:30,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-09-08 00:49:30,500 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:31,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-09-08 00:49:31,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:32,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:32,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-09-08 00:49:33,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:33,030 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-09-08 00:49:33,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-09-08 00:49:33,523 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:34,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-09-08 00:49:34,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:35,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:35,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-09-08 00:49:36,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:36,090 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-09-08 00:49:36,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-09-08 00:49:37,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-09-08 00:49:37,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-09-08 00:49:37,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-09-08 00:49:38,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-09-08 00:49:38,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:39,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-09-08 00:49:39,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:39,920 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-09-08 00:49:40,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-09-08 00:49:40,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-09-08 00:49:41,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-09-08 00:49:41,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:42,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-09-08 00:49:42,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:42,814 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-09-08 00:49:43,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-09-08 00:49:43,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-09-08 00:49:44,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-09-08 00:49:44,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:45,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-09-08 00:49:45,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:45,633 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-09-08 00:49:46,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-09-08 00:49:46,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-09-08 00:49:47,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-09-08 00:49:47,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:48,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:48,009 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:49:48,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-09-08 00:49:48,010 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:49:48,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:48,012 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:49:48,015 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:49:48,015 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:49:48,018 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:49:48,027 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-09-08 00:49:48,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-09-08 00:49:48,651 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-09-08 00:49:48,957 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-08 00:49:48,957 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-09-08 00:49:48,962 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-09-08 00:49:49,264 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-08 00:49:49,265 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-09-08 00:49:49,269 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-09-08 00:49:49,552 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-08 00:49:49,552 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-09-08 00:49:49,556 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-09-08 00:49:49,840 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-08 00:49:49,840 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-09-08 00:49:49,844 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-09-08 00:49:50,124 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-08 00:49:50,124 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-09-08 00:49:50,129 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:49:50,129 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:49:50,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:50,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-09-08 00:49:50,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:50,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-09-08 00:49:50,153 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-09-08 00:49:50,153 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-09-08 00:49:50,155 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:50,158 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-09-08 00:49:50,158 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-09-08 00:49:50,158 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-09-08 00:49:50,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:50,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-09-08 00:49:50,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:50,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-09-08 00:49:50,322 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-09-08 00:49:50,322 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-09-08 00:49:50,322 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-09-08 00:49:50,323 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-09-08 00:49:50,324 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:50,328 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-09-08 00:49:50,328 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-09-08 00:49:50,328 [ scc.git] DEBUG src/app/header.html | 5 +
2025-09-08 00:49:50,328 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-09-08 00:49:50,328 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-09-08 00:49:50,328 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-09-08 00:49:50,328 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-09-08 00:49:50,328 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-09-08 00:49:50,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:50,693 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-09-08 00:49:50,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:50,702 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-09-08 00:49:50,716 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-09-08 00:49:50,717 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:50,721 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-09-08 00:49:50,721 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-09-08 00:49:50,721 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-09-08 00:49:51,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:51,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-09-08 00:49:51,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:51,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-09-08 00:49:51,120 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:49:51,131 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-09-08 00:49:51,131 [ scc.git] DEBUG package.json | 2 +-
2025-09-08 00:49:51,131 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-09-08 00:49:51,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:51,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-09-08 00:49:51,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:51,497 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-09-08 00:49:51,535 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:49:51,535 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-08 00:49:51,535 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:49:51,536 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:49:51,539 [ scc.git] DEBUG Calling 'git reset --hard 9232e39dbfb90ea365b2fac049de7f0b6073c276'
2025-09-08 00:49:51,546 [ scc.git] DEBUG HEAD is now at 9232e39 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-09-08 00:49:51,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:49:51,902 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-09-08 00:49:51,904 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-09-08 00:49:51,907 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-09-08 00:49:51,909 [ scc.config] DEBUG Found github.token
2025-09-08 00:49:51,909 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-09-08 00:49:51,910 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:49:51,950 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:49:51,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:49:51,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:49:51,992 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:49:51,999 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa181303210> has no local changes
2025-09-08 00:49:51,999 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:49:52,009 [ scc.git] DEBUG [detached HEAD f51d543] merge master -Dorg -Ssuccess-only
2025-09-08 00:49:52,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:49:52,010 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:49:52,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-09-08 00:49:52,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2025-09-08 00:49:53,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2025-09-08 00:49:53,352 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:49:53,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-09-08 00:49:54,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:55,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:49:55,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-09-08 00:49:55,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:55,954 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:49:56,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-09-08 00:49:57,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-09-08 00:49:57,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:49:58,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-09-08 00:49:58,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:49:58,412 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:49:58,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-09-08 00:49:59,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-09-08 00:49:59,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-09-08 00:50:00,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:00,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-09-08 00:50:01,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:01,264 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-09-08 00:50:01,265 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:01,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-09-08 00:50:01,265 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:01,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:01,268 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:01,271 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:01,271 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:01,274 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:01,277 [ scc.git] DEBUG Already up to date.
2025-09-08 00:50:01,277 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-09-08 00:50:01,570 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-09-08 00:50:01,570 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-09-08 00:50:01,575 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-09-08 00:50:01,853 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-09-08 00:50:01,853 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-09-08 00:50:01,858 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2025-09-08 00:50:02,132 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-09-08 00:50:02,132 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2025-09-08 00:50:02,137 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:02,137 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:02,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:02,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-09-08 00:50:02,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:02,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-09-08 00:50:02,155 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:02,158 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-09-08 00:50:02,158 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-09-08 00:50:02,158 [ scc.git] DEBUG requirements.txt | 2 +-
2025-09-08 00:50:02,158 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-09-08 00:50:02,158 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-09-08 00:50:02,158 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-09-08 00:50:02,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:02,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-09-08 00:50:02,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:02,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-09-08 00:50:02,319 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:02,322 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:50:02,322 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:50:02,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:02,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-09-08 00:50:02,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:02,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-09-08 00:50:02,731 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-09-08 00:50:02,731 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2025-09-08 00:50:02,731 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:50:02,731 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:50:02,734 [ scc.git] DEBUG Calling 'git reset --hard 6c6678f42df19db3546a8b7a27666d44dfbbd765'
2025-09-08 00:50:02,738 [ scc.git] DEBUG HEAD is now at 6c6678f merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2025-09-08 00:50:03,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:03,112 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-09-08 00:50:03,115 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2025-09-08 00:50:03,117 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2025-09-08 00:50:03,120 [ scc.config] DEBUG Found github.token
2025-09-08 00:50:03,120 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2025-09-08 00:50:03,120 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:03,159 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:03,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:03,161 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:03,201 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:03,205 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa181302ed0> has no local changes
2025-09-08 00:50:03,205 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:03,211 [ scc.git] DEBUG [detached HEAD 81de3e2] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:03,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:03,212 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:50:03,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-09-08 00:50:04,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-09-08 00:50:04,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-09-08 00:50:05,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-09-08 00:50:05,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:06,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-09-08 00:50:06,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:06,566 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-09-08 00:50:07,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-09-08 00:50:07,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-09-08 00:50:08,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-09-08 00:50:08,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:09,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-09-08 00:50:09,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:09,592 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-09-08 00:50:09,592 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:09,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-09-08 00:50:09,593 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:09,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:09,596 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:09,598 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:09,598 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:09,601 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:09,609 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-09-08 00:50:10,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-09-08 00:50:10,257 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-09-08 00:50:10,549 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-09-08 00:50:10,549 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-09-08 00:50:10,554 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-09-08 00:50:10,832 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-09-08 00:50:10,832 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-09-08 00:50:10,836 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:10,836 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:10,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:10,839 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-09-08 00:50:10,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:10,845 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-09-08 00:50:10,859 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-09-08 00:50:10,859 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-09-08 00:50:10,859 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-09-08 00:50:10,859 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-09-08 00:50:10,860 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:50:10,860 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:50:10,863 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-08 00:50:10,868 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-09-08 00:50:11,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:11,047 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-09-08 00:50:11,051 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-08 00:50:11,055 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-09-08 00:50:11,057 [ scc.config] DEBUG Found github.token
2025-09-08 00:50:11,057 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-09-08 00:50:11,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-09-08 00:50:11,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:11,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-09-08 00:50:11,079 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-09-08 00:50:11,079 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-09-08 00:50:11,079 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-09-08 00:50:11,080 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:50:11,080 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:50:11,083 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-08 00:50:11,088 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-09-08 00:50:11,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:11,457 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-09-08 00:50:11,461 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-08 00:50:11,464 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-09-08 00:50:11,466 [ scc.config] DEBUG Found github.token
2025-09-08 00:50:11,466 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-09-08 00:50:11,467 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:11,508 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:11,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:11,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:11,551 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:11,555 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1812ec3d0> has no local changes
2025-09-08 00:50:11,556 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:11,563 [ scc.git] DEBUG [detached HEAD a3b06cc] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:11,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:11,563 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:50:12,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-09-08 00:50:12,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-09-08 00:50:13,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-09-08 00:50:13,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:14,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:14,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-09-08 00:50:15,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:15,093 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:50:15,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-09-08 00:50:15,547 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:50:16,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-09-08 00:50:16,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:17,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:17,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-09-08 00:50:18,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:18,144 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-09-08 00:50:18,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-09-08 00:50:18,614 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:50:19,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-09-08 00:50:19,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:20,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:20,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-09-08 00:50:21,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:21,032 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-09-08 00:50:21,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-09-08 00:50:22,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-09-08 00:50:22,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-09-08 00:50:22,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-09-08 00:50:23,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-09-08 00:50:23,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-09-08 00:50:24,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-09-08 00:50:24,314 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:24,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-09-08 00:50:24,314 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:24,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:24,317 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:24,319 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:24,319 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:24,322 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:24,325 [ scc.git] DEBUG Already up to date.
2025-09-08 00:50:24,325 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-09-08 00:50:24,611 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-09-08 00:50:24,611 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-09-08 00:50:24,616 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-09-08 00:50:24,897 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-09-08 00:50:24,897 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-09-08 00:50:24,901 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-09-08 00:50:25,186 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-09-08 00:50:25,186 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-09-08 00:50:25,191 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:25,191 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:25,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:25,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-09-08 00:50:25,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:25,199 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-09-08 00:50:25,207 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:25,211 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-09-08 00:50:25,211 [ scc.git] DEBUG package.json | 2 +-
2025-09-08 00:50:25,211 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-09-08 00:50:25,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:25,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-09-08 00:50:25,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:25,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-09-08 00:50:25,387 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-08 00:50:25,387 [ scc.git] DEBUG Auto-merging package.json
2025-09-08 00:50:25,388 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:25,392 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-09-08 00:50:25,392 [ scc.git] DEBUG package.json | 2 +-
2025-09-08 00:50:25,392 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-09-08 00:50:25,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:25,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-09-08 00:50:25,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:25,780 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-09-08 00:50:25,790 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:25,793 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:50:25,793 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:50:26,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:26,169 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:26,211 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:26,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:26,213 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:26,254 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:26,258 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa182425790> has no local changes
2025-09-08 00:50:26,259 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:26,265 [ scc.git] DEBUG [detached HEAD 87e3ec9] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:26,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:26,266 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:50:26,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2025-09-08 00:50:27,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2025-09-08 00:50:27,196 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:50:27,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-09-08 00:50:28,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:28,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:29,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-09-08 00:50:29,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:29,760 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:50:29,760 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:29,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-09-08 00:50:29,760 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:29,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:29,763 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:29,765 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:29,765 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:29,769 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:29,772 [ scc.git] DEBUG Already up to date.
2025-09-08 00:50:29,772 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-09-08 00:50:30,063 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2025-09-08 00:50:30,063 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-09-08 00:50:30,067 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:30,067 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:30,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:30,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2025-09-08 00:50:30,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:30,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2025-09-08 00:50:30,083 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:30,086 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:50:30,086 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:50:30,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:30,245 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:30,287 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:30,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:30,289 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:30,330 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:30,334 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa18133d890> has no local changes
2025-09-08 00:50:30,334 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:30,340 [ scc.git] DEBUG [detached HEAD 968a61f] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:30,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:30,341 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:50:30,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-09-08 00:50:31,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2025-09-08 00:50:31,243 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:50:31,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-09-08 00:50:32,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:32,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:33,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-09-08 00:50:33,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:34,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-09-08 00:50:34,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2025-09-08 00:50:34,822 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:50:35,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-09-08 00:50:35,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-09-08 00:50:36,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-09-08 00:50:36,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:37,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:37,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-09-08 00:50:38,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:38,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-09-08 00:50:39,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-09-08 00:50:39,196 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-09-08 00:50:39,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-09-08 00:50:39,676 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:39,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-09-08 00:50:39,677 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:39,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:39,680 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:39,682 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:39,682 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:39,686 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:39,689 [ scc.git] DEBUG Already up to date.
2025-09-08 00:50:39,689 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-09-08 00:50:39,981 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-09-08 00:50:39,981 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-09-08 00:50:39,986 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2025-09-08 00:50:40,274 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-09-08 00:50:40,275 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2025-09-08 00:50:40,279 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:40,279 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:40,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:40,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-09-08 00:50:40,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:40,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-09-08 00:50:40,295 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:40,299 [ scc.git] DEBUG setup.py | 4 +-
2025-09-08 00:50:40,299 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-09-08 00:50:40,299 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-09-08 00:50:40,299 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-09-08 00:50:40,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:40,440 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2025-09-08 00:50:40,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:40,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2025-09-08 00:50:40,454 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:40,457 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:50:40,457 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:50:40,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:40,847 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:40,890 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:40,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:40,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:40,933 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:40,937 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1824d3650> has no local changes
2025-09-08 00:50:40,937 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:40,944 [ scc.git] DEBUG [detached HEAD e9572d0] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:40,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:40,945 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:50:41,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-09-08 00:50:41,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2025-09-08 00:50:41,885 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:50:42,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-09-08 00:50:42,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:43,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:44,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-09-08 00:50:44,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:44,521 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:50:45,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-09-08 00:50:45,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-09-08 00:50:45,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-09-08 00:50:46,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:47,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-09-08 00:50:47,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:47,445 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-09-08 00:50:47,445 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:47,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-09-08 00:50:47,445 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:47,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:47,448 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:47,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:47,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:47,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:47,457 [ scc.git] DEBUG Already up to date.
2025-09-08 00:50:47,457 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-09-08 00:50:47,748 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-09-08 00:50:47,748 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-09-08 00:50:47,753 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-09-08 00:50:48,030 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-09-08 00:50:48,030 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-09-08 00:50:48,034 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:48,034 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:48,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:48,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-09-08 00:50:48,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:48,042 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-09-08 00:50:48,052 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG Auto-merging setup.py
2025-09-08 00:50:48,052 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-09-08 00:50:48,053 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:50:48,053 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:50:48,056 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-09-08 00:50:48,060 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-09-08 00:50:48,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:48,229 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-09-08 00:50:48,233 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-09-08 00:50:48,236 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- omero_signup/urls.py
- setup.py
- omero_signup/signup_settings.py
--conflicts
2025-09-08 00:50:48,238 [ scc.config] DEBUG Found github.token
2025-09-08 00:50:48,238 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-09-08 00:50:48,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-09-08 00:50:48,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:48,243 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-09-08 00:50:48,251 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:48,254 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:50:48,254 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:50:48,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:48,632 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:48,675 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:48,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:48,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:48,717 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:48,721 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa181311cd0> has no local changes
2025-09-08 00:50:48,721 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:48,728 [ scc.git] DEBUG [detached HEAD 90313a5] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:48,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:48,728 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:50:49,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-09-08 00:50:49,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-09-08 00:50:50,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-09-08 00:50:50,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:51,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:51,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-09-08 00:50:52,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:52,237 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-09-08 00:50:52,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-09-08 00:50:53,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-09-08 00:50:53,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-09-08 00:50:54,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:54,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:50:55,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-09-08 00:50:55,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-09-08 00:50:56,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-09-08 00:50:56,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-09-08 00:50:57,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-09-08 00:50:57,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:50:58,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-09-08 00:50:58,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:50:58,485 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-09-08 00:50:58,485 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:50:58,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-09-08 00:50:58,485 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:58,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:58,488 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:50:58,490 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:50:58,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:50:58,494 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:50:58,497 [ scc.git] DEBUG Already up to date.
2025-09-08 00:50:58,497 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-09-08 00:50:58,800 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-09-08 00:50:58,800 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-09-08 00:50:58,805 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-09-08 00:50:59,091 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-09-08 00:50:59,092 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-09-08 00:50:59,096 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:50:59,096 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:59,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:59,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-09-08 00:50:59,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:59,106 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-09-08 00:50:59,119 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-09-08 00:50:59,123 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-09-08 00:50:59,124 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-09-08 00:50:59,124 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-09-08 00:50:59,124 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-09-08 00:50:59,124 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-09-08 00:50:59,125 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-09-08 00:50:59,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:59,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-09-08 00:50:59,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:59,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-09-08 00:50:59,311 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:50:59,314 [ scc.git] DEBUG docker | 1 +
2025-09-08 00:50:59,314 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-09-08 00:50:59,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:50:59,689 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:50:59,732 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:50:59,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:50:59,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:50:59,774 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:50:59,778 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa181321b50> has no local changes
2025-09-08 00:50:59,778 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:50:59,786 [ scc.git] DEBUG [detached HEAD a8526b5] merge master -Dorg -Ssuccess-only
2025-09-08 00:50:59,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:50:59,786 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:00,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2025-09-08 00:51:00,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2025-09-08 00:51:00,688 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:51:01,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-09-08 00:51:01,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:02,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:03,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-09-08 00:51:03,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:03,470 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:03,470 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:03,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-09-08 00:51:03,470 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:03,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:03,473 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:51:03,476 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:03,476 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:51:03,479 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:51:03,482 [ scc.git] DEBUG Already up to date.
2025-09-08 00:51:03,482 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-09-08 00:51:03,775 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2025-09-08 00:51:03,775 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-09-08 00:51:03,780 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:03,780 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:03,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:03,783 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-09-08 00:51:03,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:03,788 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-09-08 00:51:03,797 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:03,800 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:51:03,800 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:51:03,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:03,943 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:03,987 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:03,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:03,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:04,033 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:04,037 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa181355550> has no local changes
2025-09-08 00:51:04,037 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:04,044 [ scc.git] DEBUG [detached HEAD b730e4c] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:04,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:04,044 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:04,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-09-08 00:51:04,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2025-09-08 00:51:04,949 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:51:05,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-09-08 00:51:06,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:06,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:07,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-09-08 00:51:07,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:07,509 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:07,509 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:07,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-09-08 00:51:07,509 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:07,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:07,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:51:07,514 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:07,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:51:07,517 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:51:07,526 [ scc.git] DEBUG Updating deab817..160d894
2025-09-08 00:51:08,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-09-08 00:51:08,127 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-09-08 00:51:08,411 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-09-08 00:51:08,411 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-09-08 00:51:08,417 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:08,417 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:08,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:08,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-09-08 00:51:08,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:08,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-09-08 00:51:08,433 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:08,436 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:51:08,436 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:51:08,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:08,585 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:08,629 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:08,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:08,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:08,673 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:08,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa18136c650> has no local changes
2025-09-08 00:51:08,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:08,684 [ scc.git] DEBUG [detached HEAD 4ab8e32] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:08,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:08,684 [ scc.git] INFO Overriding base-branch from master to main
2025-09-08 00:51:08,684 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:09,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-09-08 00:51:09,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2025-09-08 00:51:10,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2025-09-08 00:51:10,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8 HTTP/1.1" 200 None
2025-09-08 00:51:11,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:11,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:12,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/cf419dd60e4884ee15050271c97a6268e6e998b8 HTTP/1.1" 200 None
2025-09-08 00:51:12,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/cf419dd60e4884ee15050271c97a6268e6e998b8?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:12,538 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2025-09-08 00:51:12,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-09-08 00:51:13,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-09-08 00:51:13,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-09-08 00:51:14,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-09-08 00:51:14,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:15,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-09-08 00:51:15,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:15,817 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-09-08 00:51:15,818 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:15,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-09-08 00:51:15,818 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:15,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:15,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-09-08 00:51:15,823 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:15,823 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-09-08 00:51:15,827 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-09-08 00:51:15,835 [ scc.git] DEBUG Updating 8f3c313..00e0207
2025-09-08 00:51:16,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2025-09-08 00:51:16,460 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-09-08 00:51:16,755 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-09-08 00:51:16,756 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-09-08 00:51:16,760 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2025-09-08 00:51:17,053 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-09-08 00:51:17,053 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2025-09-08 00:51:17,057 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:17,058 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:17,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:17,060 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-09-08 00:51:17,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:17,066 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-09-08 00:51:17,076 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-09-08 00:51:17,076 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-09-08 00:51:17,076 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-09-08 00:51:17,077 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:51:17,077 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:51:17,080 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-09-08 00:51:17,085 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-09-08 00:51:17,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:17,235 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-09-08 00:51:17,238 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-09-08 00:51:17,240 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-09-08 00:51:17,243 [ scc.config] DEBUG Found github.token
2025-09-08 00:51:17,243 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-09-08 00:51:17,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf419dd60e4884ee15050271c97a6268e6e998b8'
2025-09-08 00:51:17,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:17,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) cf419dd60e4884ee15050271c97a6268e6e998b8'
2025-09-08 00:51:17,258 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-09-08 00:51:17,259 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:17,262 [ scc.git] DEBUG README.rst | 3 +
2025-09-08 00:51:17,262 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2025-09-08 00:51:17,262 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2025-09-08 00:51:17,262 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2025-09-08 00:51:17,262 [ scc.git] DEBUG setup.py | 5 +-
2025-09-08 00:51:17,262 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2025-09-08 00:51:17,263 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2025-09-08 00:51:17,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:17,635 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:17,678 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:17,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:17,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:17,721 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:17,725 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa18132a2d0> has no local changes
2025-09-08 00:51:17,725 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:17,732 [ scc.git] DEBUG [detached HEAD 6537ab6] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:17,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:17,733 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:18,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2025-09-08 00:51:18,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2025-09-08 00:51:18,649 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:51:19,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-09-08 00:51:19,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:20,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:20,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-09-08 00:51:21,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:21,175 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:21,175 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:21,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-09-08 00:51:21,175 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:21,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:21,178 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:51:21,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:21,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:51:21,184 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:51:21,188 [ scc.git] DEBUG Already up to date.
2025-09-08 00:51:21,188 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2025-09-08 00:51:21,504 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2025-09-08 00:51:21,504 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2025-09-08 00:51:21,508 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:21,508 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:21,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:21,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-09-08 00:51:21,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:21,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-09-08 00:51:21,523 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:21,526 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:51:21,526 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:51:21,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:21,668 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:21,711 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:21,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:21,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:21,755 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:21,758 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1813c4dd0> has no local changes
2025-09-08 00:51:21,758 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:21,765 [ scc.git] DEBUG [detached HEAD 071410f] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:21,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:21,766 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:22,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2025-09-08 00:51:22,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2025-09-08 00:51:22,624 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:51:23,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-09-08 00:51:23,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:24,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:24,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-09-08 00:51:25,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:25,228 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:25,228 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:25,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-09-08 00:51:25,228 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:25,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:25,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:51:25,234 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:25,234 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:51:25,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:51:25,240 [ scc.git] DEBUG Already up to date.
2025-09-08 00:51:25,240 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2025-09-08 00:51:25,529 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2025-09-08 00:51:25,529 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2025-09-08 00:51:25,534 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:25,534 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:25,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:25,536 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-09-08 00:51:25,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:25,542 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-09-08 00:51:25,550 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:25,553 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:51:25,553 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:51:25,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:25,691 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:25,733 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:25,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:25,735 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:25,776 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:25,780 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1813a5610> has no local changes
2025-09-08 00:51:25,780 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:25,787 [ scc.git] DEBUG [detached HEAD 51bdbf3] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:25,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:25,787 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:26,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-09-08 00:51:26,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-09-08 00:51:27,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-09-08 00:51:27,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-09-08 00:51:28,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:28,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-09-08 00:51:29,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:29,038 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-09-08 00:51:29,038 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:29,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-09-08 00:51:29,038 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:29,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:29,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-08 00:51:29,043 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:29,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-08 00:51:29,046 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-08 00:51:29,050 [ scc.git] DEBUG Already up to date.
2025-09-08 00:51:29,050 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-09-08 00:51:29,336 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-09-08 00:51:29,337 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-09-08 00:51:29,341 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:29,341 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:29,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:29,344 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-09-08 00:51:29,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:29,350 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-09-08 00:51:29,359 [ scc.git] DEBUG Auto-merging Dockerfile
2025-09-08 00:51:29,359 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-09-08 00:51:29,359 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:51:29,359 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:51:29,362 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-09-08 00:51:29,367 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-09-08 00:51:29,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:29,508 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-09-08 00:51:29,510 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-09-08 00:51:29,513 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-09-08 00:51:29,515 [ scc.config] DEBUG Found github.token
2025-09-08 00:51:29,516 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-09-08 00:51:29,516 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:29,557 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:29,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:29,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:29,599 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:29,603 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1813c10d0> has no local changes
2025-09-08 00:51:29,604 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:29,611 [ scc.git] DEBUG [detached HEAD 72c1ded] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:29,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:29,611 [ scc.git] INFO Overriding base-branch from master to develop
2025-09-08 00:51:29,611 [ scc.repo] DEBUG ## PRs found:
2025-09-08 00:51:30,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-09-08 00:51:30,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/228 HTTP/1.1" 200 None
2025-09-08 00:51:30,683 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-08 00:51:31,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280 HTTP/1.1" 200 None
2025-09-08 00:51:31,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:32,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:32,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/0c3fd48b0a51e6ced85e979d6a7da516870ea280 HTTP/1.1" 200 None
2025-09-08 00:51:33,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/0c3fd48b0a51e6ced85e979d6a7da516870ea280?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:33,214 [ scc.repo] DEBUG - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:33,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-09-08 00:51:34,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-09-08 00:51:34,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-09-08 00:51:35,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:35,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-08 00:51:36,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-09-08 00:51:36,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:36,447 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-09-08 00:51:36,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-09-08 00:51:37,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-09-08 00:51:37,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-09-08 00:51:38,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-08 00:51:38,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-09-08 00:51:39,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-09-08 00:51:39,254 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-09-08 00:51:39,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-09-08 00:51:40,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-09-08 00:51:40,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-09-08 00:51:41,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-09-08 00:51:41,133 [ scc.repo] DEBUG ## Branches found:
2025-09-08 00:51:41,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-09-08 00:51:41,133 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:41,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:41,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-09-08 00:51:41,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-08 00:51:41,138 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-09-08 00:51:41,141 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-09-08 00:51:41,152 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-09-08 00:51:41,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-09-08 00:51:42,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-09-08 00:51:42,373 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-09-08 00:51:42,691 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-09-08 00:51:42,691 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-09-08 00:51:42,696 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-09-08 00:51:42,984 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-09-08 00:51:42,984 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-09-08 00:51:42,988 [ scc.git] DEBUG Calling 'git fetch origin pull/228/head'
2025-09-08 00:51:43,280 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-09-08 00:51:43,280 [ scc.git] DEBUG * branch refs/pull/228/head -> FETCH_HEAD
2025-09-08 00:51:43,284 [ scc.git] DEBUG ## Unique users: []
2025-09-08 00:51:43,284 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:43,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:43,287 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-09-08 00:51:43,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:43,295 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-09-08 00:51:43,307 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-09-08 00:51:43,307 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-08 00:51:43,307 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-08 00:51:43,310 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-09-08 00:51:43,314 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-09-08 00:51:43,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:43,461 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-09-08 00:51:43,466 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-09-08 00:51:43,471 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#526](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-09-08 00:51:43,473 [ scc.config] DEBUG Found github.token
2025-09-08 00:51:43,473 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-09-08 00:51:43,473 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-09-08 00:51:43,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:43,480 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-09-08 00:51:43,491 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:43,494 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-09-08 00:51:43,494 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-09-08 00:51:43,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:43,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c3fd48b0a51e6ced85e979d6a7da516870ea280'
2025-09-08 00:51:43,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:43,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 228 (Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows) 0c3fd48b0a51e6ced85e979d6a7da516870ea280'
2025-09-08 00:51:43,871 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-08 00:51:43,874 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-08 00:51:43,874 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-08 00:51:44,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:44,275 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-08 00:51:44,318 [ scc.git] DEBUG Get sha1 of %s
2025-09-08 00:51:44,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-08 00:51:44,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:44,361 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:44,365 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa1823ec490> has no local changes
2025-09-08 00:51:44,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:44,372 [ scc.git] DEBUG [detached HEAD bb47e84] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:44,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:44,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-08 00:51:44,451 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-09-08 00:51:44,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:44,703 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-09-08 00:51:44,705 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-09-08 00:51:45,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:45,094 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-09-08 00:51:45,096 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-09-08 00:51:45,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:45,496 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-09-08 00:51:45,499 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-09-08 00:51:45,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:45,908 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-09-08 00:51:46,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:46,298 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-09-08 00:51:46,300 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-09-08 00:51:46,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:46,697 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-09-08 00:51:46,699 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-09-08 00:51:47,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:47,099 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-09-08 00:51:47,101 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-09-08 00:51:47,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:47,490 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-09-08 00:51:47,492 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-09-08 00:51:47,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:47,893 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-09-08 00:51:47,895 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-09-08 00:51:48,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:48,303 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-09-08 00:51:48,305 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-09-08 00:51:48,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:48,699 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-09-08 00:51:48,701 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-09-08 00:51:49,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:49,092 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-09-08 00:51:49,094 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-09-08 00:51:49,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:49,490 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-09-08 00:51:49,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:49,883 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-09-08 00:51:50,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:50,272 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-09-08 00:51:50,274 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-09-08 00:51:50,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:50,676 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-09-08 00:51:51,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:51,065 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-09-08 00:51:51,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:51,446 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-09-08 00:51:51,448 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-09-08 00:51:51,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:51,842 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-09-08 00:51:51,844 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-09-08 00:51:52,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:52,242 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-09-08 00:51:52,244 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-09-08 00:51:52,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:52,640 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-09-08 00:51:52,642 [ scc.config] DEBUG Found submodule.scripts.url
2025-09-08 00:51:53,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-08 00:51:53,043 [ scc.config] DEBUG Found submodule.scripts.branch
2025-09-08 00:51:53,044 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-08 00:51:53,135 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa184ddb150> has local changes
2025-09-08 00:51:53,135 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 180 will-moore 'Register command'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#526 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/526/)'
2025-09-08 00:51:53,148 [ scc.git] DEBUG [detached HEAD 250982b] merge master -Dorg -Ssuccess-only
2025-09-08 00:51:53,148 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-09-08 00:51:53,149 [ scc.merge] INFO Repository: ome/omero-plugins
2025-09-08 00:51:53,151 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,151 [ scc.merge] INFO
2025-09-08 00:51:53,151 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,151 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-08 00:51:53,151 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-08 00:51:53,151 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-08 00:51:53,151 [ scc.merge] INFO
2025-09-08 00:51:53,151 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-09-08 00:51:53,151 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,151 [ scc.merge] INFO
2025-09-08 00:51:53,151 [ scc.merge] INFO
2025-09-08 00:51:53,151 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-09-08 00:51:53,151 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,151 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-09-08 00:51:53,151 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,151 [ scc.merge] INFO
2025-09-08 00:51:53,151 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,152 [ scc.merge] INFO
2025-09-08 00:51:53,152 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-09-08 00:51:53,152 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,152 [ scc.merge] INFO
2025-09-08 00:51:53,152 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,152 [ scc.merge] INFO
2025-09-08 00:51:53,152 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-09-08 00:51:53,152 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-09-08 00:51:53,152 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-09-08 00:51:53,152 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-09-08 00:51:53,152 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:51:53,153 [ scc.merge] INFO
2025-09-08 00:51:53,153 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 180 will-moore 'Register command'
2025-09-08 00:51:53,153 [ scc.merge] INFO
2025-09-08 00:51:53,153 [ scc.merge] INFO Repository: ome/omero-figure
2025-09-08 00:51:53,153 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-09-08 00:51:53,153 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc
2025-09-08 00:51:53,153 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:51:53,153 [ scc.merge] INFO
2025-09-08 00:51:53,153 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-09-08 00:51:53,153 [ scc.merge] INFO
2025-09-08 00:51:53,153 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-09-08 00:51:53,153 [ scc.merge] INFO
2025-09-08 00:51:53,153 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-09-08 00:51:53,153 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,153 [ scc.merge] INFO
2025-09-08 00:51:53,153 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,153 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Repository: ome/omero-gallery
2025-09-08 00:51:53,154 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-09-08 00:51:53,154 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-09-08 00:51:53,154 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-09-08 00:51:53,154 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,154 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-09-08 00:51:53,154 [ scc.merge] INFO
2025-09-08 00:51:53,154 [ scc.merge] INFO Repository: ome/omero-mapr
2025-09-08 00:51:53,154 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-09-08 00:51:53,155 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Repository: ome/omero-metadata
2025-09-08 00:51:53,155 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-09-08 00:51:53,155 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Repository: ome/omero-parade
2025-09-08 00:51:53,155 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-09-08 00:51:53,155 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-09-08 00:51:53,155 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,155 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,155 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,155 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Repository: ome/omero-rois
2025-09-08 00:51:53,156 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-09-08 00:51:53,156 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Repository: ome/omero-signup
2025-09-08 00:51:53,156 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-09-08 00:51:53,156 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-09-08 00:51:53,156 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Repository: ome/omero-upload
2025-09-08 00:51:53,156 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,156 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,156 [ scc.merge] INFO
2025-09-08 00:51:53,156 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-09-08 00:51:53,156 [ scc.merge] INFO Updating deab817..160d894
2025-09-08 00:51:53,157 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-09-08 00:51:53,157 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-09-08 00:51:53,157 [ scc.merge] INFO Updating 8f3c313..00e0207
2025-09-08 00:51:53,157 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-09-08 00:51:53,157 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-09-08 00:51:53,157 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-09-08 00:51:53,157 [ scc.merge] INFO Already up to date.
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,157 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-09-08 00:51:53,157 [ scc.merge] INFO
2025-09-08 00:51:53,157 [ scc.merge] INFO Repository: ome/scripts
2025-09-08 00:51:53,158 [ scc.merge] INFO Excluded PRs:
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-09-08 00:51:53,158 [ scc.merge] INFO Updating 4b4c755..573db34
2025-09-08 00:51:53,158 [ scc.merge] INFO Previously merged:
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-09-08 00:51:53,158 [ scc.merge] INFO
2025-09-08 00:51:53,158 [ scc.merge] INFO Merged PRs:
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-09-08 00:51:53,158 [ scc.merge] INFO
2025-09-08 00:51:53,158 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-08 00:51:53,158 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-09-08 00:51:53,158 [ scc.merge] INFO
2025-09-08 00:51:53,158 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-08 00:51:53,158 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-09-08 00:51:53,162 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-09-08 00:51:53,164 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,167 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-09-08 00:51:53,167 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-09-08 00:51:53,169 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-09-08 00:51:53,171 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-09-08 00:51:53,174 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-09-08 00:51:53,176 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-09-08 00:51:53,178 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-09-08 00:51:53,181 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-09-08 00:51:53,183 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-09-08 00:51:53,186 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-09-08 00:51:53,188 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-09-08 00:51:53,190 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-09-08 00:51:53,193 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-09-08 00:51:53,195 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-09-08 00:51:53,197 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-09-08 00:51:53,200 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-09-08 00:51:53,203 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-09-08 00:51:53,205 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-09-08 00:51:53,207 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-09-08 00:51:53,209 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-08 00:51:53,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-09-08 00:51:53,212 [ scc.git] DEBUG Calling 'git remote'
2025-09-08 00:51:53,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD c0e3e07] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD 9e261c5] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-09-08 00:52:39,900 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-09-08 00:52:49,181 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-09-08 00:52:51,624 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-08 00:52:56,275 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-08 00:53:35,392 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS