Started by upstream project "Trigger" build number 252 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 217 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-18 06:58:04,040 [ scc.config] DEBUG Found github.token 2024-10-18 06:58:04,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-18 06:58:04,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:58:04,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:58:04,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-18 06:58:04,970 [ scc.gh] DEBUG 4635 remaining from 5000 (Reset at 07:10 2024-10-18 06:58:04,971 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:04,976 [ scc.git] DEBUG Check current status 2024-10-18 06:58:04,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:04,979 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-18 06:58:04,979 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:05,022 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-18 06:58:05,025 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-18 06:58:05,028 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-18 06:58:05,075 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-18 06:58:05,080 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-18 06:58:05,082 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-18 06:58:05,085 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-18 06:58:05,130 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-18 06:58:05,133 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-18 06:58:05,136 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-18 06:58:05,138 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-18 06:58:05,140 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-18 06:58:05,143 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-18 06:58:05,146 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-18 06:58:05,160 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-18 06:58:05,162 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-18 06:58:05,165 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-18 06:58:05,167 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-18 06:58:05,169 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-18 06:58:05,172 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-18 06:58:05,174 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-18 06:58:05,178 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-18 06:58:05,182 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:05,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-18 06:58:05,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:06,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:06,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:07,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:07,123 [ scc.git] DEBUG Resetting... 2024-10-18 06:58:07,123 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-18 06:58:07,132 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-18 06:58:07,132 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-18 06:58:07,222 [ scc.git] DEBUG Check current status 2024-10-18 06:58:07,223 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:07,226 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-18 06:58:07,226 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:07,269 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-18 06:58:07,272 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-18 06:58:07,274 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-18 06:58:07,277 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-18 06:58:07,281 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-18 06:58:07,283 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-18 06:58:07,286 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-18 06:58:07,289 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-18 06:58:07,292 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-18 06:58:07,294 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-18 06:58:07,297 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-18 06:58:07,299 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-18 06:58:07,302 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-18 06:58:07,305 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-18 06:58:07,308 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-18 06:58:07,310 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-18 06:58:07,312 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-18 06:58:07,314 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-18 06:58:07,317 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-18 06:58:07,320 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-18 06:58:07,322 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-18 06:58:07,326 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-18 06:58:07,326 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-18 06:58:07,327 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-18 06:58:07,327 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-18 06:58:07,327 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-18 06:58:07,327 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-18 06:58:07,327 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:58:07,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-18 06:58:08,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-18 06:58:08,097 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 06:58:08,097 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-18 06:58:08,097 [ scc.repo] DEBUG ## Branches found: 2024-10-18 06:58:08,097 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:58:08,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:58:08,101 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 06:58:08,104 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 06:58:08,104 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 06:58:08,107 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 06:58:08,111 [ scc.git] DEBUG Already up to date. 2024-10-18 06:58:08,111 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-18 06:58:08,447 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-18 06:58:08,447 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-18 06:58:08,453 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 06:58:08,453 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:58:08,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:58:08,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-18 06:58:08,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:58:08,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-18 06:58:08,478 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 06:58:08,480 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-18 06:58:08,480 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-18 06:58:08,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:58:08,616 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 06:58:08,686 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-18 06:58:08,687 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:58:08,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:58:08,691 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 06:58:09,253 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f99f7708fd0> has no local changes 2024-10-18 06:58:09,254 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 06:58:09,325 [ scc.git] DEBUG [detached HEAD 9a775ea] merge master -Dorg -Snone 2024-10-18 06:58:09,325 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-18 06:58:09,325 [ scc.merge] INFO Already up to date. 2024-10-18 06:58:09,325 [ scc.merge] INFO 2024-10-18 06:58:09,325 [ scc.merge] INFO Merged PRs: 2024-10-18 06:58:09,326 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-18 06:58:09,326 [ scc.merge] INFO 2024-10-18 06:58:09,326 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-18 06:58:09,326 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-18 06:58:17,022 [ scc.config] DEBUG Found github.token 2024-10-18 06:58:17,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-18 06:58:17,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:58:17,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:58:17,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-18 06:58:17,988 [ scc.gh] DEBUG 4625 remaining from 5000 (Reset at 07:10 2024-10-18 06:58:17,988 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:17,993 [ scc.git] DEBUG Check current status 2024-10-18 06:58:17,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:17,997 [ scc.git] DEBUG 9a775ea merge master -Dorg -Snone 2024-10-18 06:58:17,997 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:18,038 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-18 06:58:18,041 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-18 06:58:18,043 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-18 06:58:18,046 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-18 06:58:19,840 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-18 06:58:19,842 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-18 06:58:19,845 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-18 06:58:19,848 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-18 06:58:19,851 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-18 06:58:19,854 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-18 06:58:19,856 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-18 06:58:19,859 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-18 06:58:19,862 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-18 06:58:19,864 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-18 06:58:19,867 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-18 06:58:19,869 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-18 06:58:19,872 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-18 06:58:19,874 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-18 06:58:19,876 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-18 06:58:19,879 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-18 06:58:19,881 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-18 06:58:19,884 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-18 06:58:19,889 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:19,889 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-18 06:58:19,891 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-18 06:58:20,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-18 06:58:20,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:20,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:21,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:21,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:21,758 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:21,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-18 06:58:21,828 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:21,831 [ scc.git] DEBUG Check current status 2024-10-18 06:58:21,832 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:21,835 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-18 06:58:21,835 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:21,872 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:22,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-18 06:58:22,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:23,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:23,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:23,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:23,907 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:23,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:23,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-18 06:58:23,947 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:23,951 [ scc.git] DEBUG Check current status 2024-10-18 06:58:23,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:23,954 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-18 06:58:23,954 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:23,992 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:24,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-18 06:58:24,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:25,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:25,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:26,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:26,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:26,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:26,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-18 06:58:26,087 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:26,090 [ scc.git] DEBUG Check current status 2024-10-18 06:58:26,090 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:26,094 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-18 06:58:26,094 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:26,130 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:26,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-18 06:58:26,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:27,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:27,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:28,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:28,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:28,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:28,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-18 06:58:28,201 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:28,205 [ scc.git] DEBUG Check current status 2024-10-18 06:58:28,205 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:28,209 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-18 06:58:28,209 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:28,248 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:28,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-18 06:58:29,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:29,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:29,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:30,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:30,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:30,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:30,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-18 06:58:30,327 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:30,331 [ scc.git] DEBUG Check current status 2024-10-18 06:58:30,331 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:30,335 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-18 06:58:30,336 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:30,373 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:30,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-18 06:58:31,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:31,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:32,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:32,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:32,433 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:32,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:32,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-18 06:58:32,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:32,475 [ scc.git] DEBUG Check current status 2024-10-18 06:58:32,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:32,479 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-18 06:58:32,479 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:32,519 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:32,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-18 06:58:33,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:33,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:34,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:34,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:34,629 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:34,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:34,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-18 06:58:34,665 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:34,668 [ scc.git] DEBUG Check current status 2024-10-18 06:58:34,668 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:34,672 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-18 06:58:34,672 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:34,709 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:35,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-18 06:58:35,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:35,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:36,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:36,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:36,781 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:36,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:36,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-18 06:58:36,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:36,821 [ scc.git] DEBUG Check current status 2024-10-18 06:58:36,822 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:36,825 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-18 06:58:36,825 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:36,862 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:37,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-18 06:58:37,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:38,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:38,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:38,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:38,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:38,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:38,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-18 06:58:38,972 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:38,976 [ scc.git] DEBUG Check current status 2024-10-18 06:58:38,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:38,981 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-18 06:58:38,981 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:39,023 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:39,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-18 06:58:39,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:40,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:40,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:41,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:41,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:41,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:41,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-18 06:58:41,126 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:41,130 [ scc.git] DEBUG Check current status 2024-10-18 06:58:41,130 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:41,134 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-18 06:58:41,134 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:41,174 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:41,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-18 06:58:42,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:42,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:42,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:43,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:43,245 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:43,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:43,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-18 06:58:43,282 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:43,286 [ scc.git] DEBUG Check current status 2024-10-18 06:58:43,287 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:43,290 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-18 06:58:43,291 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:43,329 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:43,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-18 06:58:44,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:44,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:44,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:45,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:45,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:45,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:45,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-18 06:58:45,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:45,396 [ scc.git] DEBUG Check current status 2024-10-18 06:58:45,396 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:45,401 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-18 06:58:45,401 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:45,445 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:45,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-18 06:58:46,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:46,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:47,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:47,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:47,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:47,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:47,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-18 06:58:47,520 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:47,525 [ scc.git] DEBUG Check current status 2024-10-18 06:58:47,525 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:47,529 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-18 06:58:47,529 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:47,570 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:48,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-18 06:58:48,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:48,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:49,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:49,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:49,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:49,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:49,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-18 06:58:49,717 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:49,721 [ scc.git] DEBUG Check current status 2024-10-18 06:58:49,721 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:49,725 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-18 06:58:49,725 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:49,764 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:50,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-18 06:58:50,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:51,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:51,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:51,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:51,818 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:51,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:51,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-18 06:58:51,856 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:51,860 [ scc.git] DEBUG Check current status 2024-10-18 06:58:51,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:51,864 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-18 06:58:51,865 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:51,905 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:52,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-18 06:58:52,231 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-18 06:58:52,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-18 06:58:52,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:53,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:53,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:54,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:54,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:54,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:54,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-18 06:58:54,179 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:54,184 [ scc.git] DEBUG Check current status 2024-10-18 06:58:54,185 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:54,189 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-18 06:58:54,189 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:54,229 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:54,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-18 06:58:55,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:55,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:55,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:56,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:56,338 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:56,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:56,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-18 06:58:56,375 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:56,380 [ scc.git] DEBUG Check current status 2024-10-18 06:58:56,380 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:56,384 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-18 06:58:56,384 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:56,424 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:56,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-18 06:58:57,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:57,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:58:58,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:58:58,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:58:58,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:58:58,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:58:58,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-18 06:58:58,604 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:58:58,609 [ scc.git] DEBUG Check current status 2024-10-18 06:58:58,609 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:58:58,613 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-18 06:58:58,613 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:58:58,654 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:58:58,654 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-18 06:58:59,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-18 06:58:59,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:58:59,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:59:00,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:59:00,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:59:00,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:00,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:00,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-18 06:59:00,787 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:59:00,792 [ scc.git] DEBUG Check current status 2024-10-18 06:59:00,792 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:59:00,796 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-18 06:59:00,796 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:59:00,835 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:59:01,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-18 06:59:01,156 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-18 06:59:01,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-18 06:59:01,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:59:02,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:59:02,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:59:03,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:59:03,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:03,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:03,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-18 06:59:03,096 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:59:03,100 [ scc.git] DEBUG Check current status 2024-10-18 06:59:03,101 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:59:03,105 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-18 06:59:03,105 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:59:03,145 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:59:03,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-18 06:59:03,481 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-18 06:59:03,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-18 06:59:04,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:59:04,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:59:04,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:59:05,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:59:05,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:05,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:05,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-18 06:59:05,467 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:59:05,472 [ scc.git] DEBUG Check current status 2024-10-18 06:59:05,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:59:05,476 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-18 06:59:05,477 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:59:05,515 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:59:05,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-18 06:59:06,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:59:06,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:59:07,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:59:07,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:59:07,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:07,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:07,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-18 06:59:07,657 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-18 06:59:07,662 [ scc.git] DEBUG Check current status 2024-10-18 06:59:07,662 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:59:07,666 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-18 06:59:07,666 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:59:07,705 [ scc.config] DEBUG Found remote.origin.url 2024-10-18 06:59:07,706 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-18 06:59:08,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-18 06:59:08,019 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-18 06:59:08,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-18 06:59:08,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-18 06:59:09,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-18 06:59:09,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-18 06:59:09,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-18 06:59:09,866 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:09,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:09,906 [ scc.git] DEBUG Resetting... 2024-10-18 06:59:09,906 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-18 06:59:09,915 [ scc.git] DEBUG HEAD is now at 9a775ea merge master -Dorg -Snone 2024-10-18 06:59:09,916 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-18 06:59:10,007 [ scc.git] DEBUG Check current status 2024-10-18 06:59:10,007 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-18 06:59:10,012 [ scc.git] DEBUG 9a775ea merge master -Dorg -Snone 2024-10-18 06:59:10,012 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-18 06:59:10,055 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-18 06:59:10,057 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-18 06:59:10,060 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-18 06:59:10,063 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-18 06:59:10,073 [ scc.git] DEBUG 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-18 06:59:10,076 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-18 06:59:10,078 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-18 06:59:10,082 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-18 06:59:10,084 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-18 06:59:10,087 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-18 06:59:10,089 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-18 06:59:10,092 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-18 06:59:10,095 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-18 06:59:10,097 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-18 06:59:10,100 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-18 06:59:10,103 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-18 06:59:10,105 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-18 06:59:10,107 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-18 06:59:10,110 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-18 06:59:10,112 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-18 06:59:10,115 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-18 06:59:10,118 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-18 06:59:10,119 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-18 06:59:10,119 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-18 06:59:10,119 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-18 06:59:10,119 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-18 06:59:10,119 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-18 06:59:10,119 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-18 06:59:10,119 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:59:10,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-18 06:59:10,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/393 HTTP/1.1" 200 None 2024-10-18 06:59:10,847 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 06:59:11,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-18 06:59:11,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:12,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d HTTP/1.1" 200 None 2024-10-18 06:59:12,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:12,756 [ scc.repo] DEBUG - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-18 06:59:12,756 [ scc.repo] DEBUG ## Branches found: 2024-10-18 06:59:12,756 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:12,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:12,762 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 06:59:12,767 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 06:59:12,768 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 06:59:12,773 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 06:59:12,778 [ scc.git] DEBUG Already up to date. 2024-10-18 06:59:12,778 [ scc.git] DEBUG Calling 'git fetch origin pull/393/head' 2024-10-18 06:59:13,130 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-18 06:59:13,131 [ scc.git] DEBUG * branch refs/pull/393/head -> FETCH_HEAD 2024-10-18 06:59:13,135 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 06:59:13,136 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:13,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:13,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-18 06:59:13,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:13,150 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 393 (Bump omero-figure from `5f62399` to `1c0e5f9`) 8ffd92874f4e32a5c98eb66a7e4dc0d3bf14853d' 2024-10-18 06:59:13,154 [ scc.git] DEBUG Already up to date. 2024-10-18 06:59:13,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:13,292 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 06:59:13,342 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:13,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:13,348 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:59:13,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-18 06:59:14,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-18 06:59:14,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-18 06:59:15,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:15,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:16,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-18 06:59:16,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:16,532 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-18 06:59:16,532 [ scc.repo] DEBUG ## Branches found: 2024-10-18 06:59:16,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-18 06:59:16,532 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:16,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:16,539 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 06:59:16,543 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 06:59:16,544 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 06:59:16,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 06:59:16,554 [ scc.git] DEBUG Already up to date. 2024-10-18 06:59:16,554 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-18 06:59:16,866 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-18 06:59:16,867 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-18 06:59:16,871 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 06:59:16,871 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:16,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:16,877 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-18 06:59:16,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:16,886 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-18 06:59:16,941 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 06:59:16,944 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-18 06:59:16,944 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-18 06:59:16,944 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-18 06:59:16,944 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-18 06:59:17,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:17,076 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 06:59:17,115 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:17,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:17,120 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:17,158 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 06:59:17,164 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ae42fe50> has no local changes 2024-10-18 06:59:17,164 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 06:59:17,172 [ scc.git] DEBUG [detached HEAD 069a570] merge master -Dorg -Ssuccess-only 2024-10-18 06:59:17,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:17,173 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:59:17,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-18 06:59:18,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-18 06:59:18,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-18 06:59:19,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-18 06:59:19,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:20,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:20,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-18 06:59:20,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:20,946 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-18 06:59:21,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-18 06:59:21,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-18 06:59:21,887 [ scc.repo] DEBUG ## Branches found: 2024-10-18 06:59:21,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-18 06:59:21,888 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:21,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:21,893 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 06:59:21,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 06:59:21,898 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 06:59:21,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 06:59:21,907 [ scc.git] DEBUG Already up to date. 2024-10-18 06:59:21,908 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-18 06:59:22,228 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-18 06:59:22,228 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-18 06:59:22,232 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 06:59:22,232 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:22,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:22,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-18 06:59:22,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:22,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-18 06:59:22,255 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 06:59:22,257 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-18 06:59:22,257 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-18 06:59:22,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:22,424 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 06:59:22,462 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:22,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:22,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:22,503 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 06:59:22,509 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac66cdc0> has no local changes 2024-10-18 06:59:22,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 06:59:22,518 [ scc.git] DEBUG [detached HEAD acd5d6b] merge master -Dorg -Ssuccess-only 2024-10-18 06:59:22,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:22,519 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:59:22,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-18 06:59:23,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-18 06:59:23,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-18 06:59:24,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-18 06:59:24,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-18 06:59:25,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-18 06:59:25,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:26,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-18 06:59:26,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:26,649 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-18 06:59:27,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-18 06:59:27,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-18 06:59:27,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-18 06:59:28,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-18 06:59:28,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-18 06:59:28,895 [ scc.repo] DEBUG ## Branches found: 2024-10-18 06:59:28,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-18 06:59:28,895 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:28,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:28,900 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 06:59:28,905 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 06:59:28,905 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 06:59:28,910 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 06:59:28,915 [ scc.git] DEBUG Already up to date. 2024-10-18 06:59:28,915 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-18 06:59:29,217 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-18 06:59:29,218 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-18 06:59:29,222 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 06:59:29,222 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:29,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:29,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-18 06:59:29,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:29,236 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-18 06:59:29,312 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-18 06:59:29,313 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 06:59:29,315 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-18 06:59:29,315 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-18 06:59:29,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:29,448 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 06:59:29,485 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:29,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:29,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:29,525 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 06:59:29,531 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac68eca0> has no local changes 2024-10-18 06:59:29,531 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 06:59:29,538 [ scc.git] DEBUG [detached HEAD d5b237d] merge master -Dorg -Ssuccess-only 2024-10-18 06:59:29,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:29,539 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:59:29,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-18 06:59:30,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-18 06:59:30,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-18 06:59:31,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-18 06:59:31,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-18 06:59:32,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:32,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:33,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-18 06:59:33,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:34,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-18 06:59:34,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-18 06:59:34,527 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-18 06:59:35,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-18 06:59:35,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-18 06:59:36,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-18 06:59:36,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-18 06:59:37,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:37,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-18 06:59:37,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:37,980 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-18 06:59:38,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-18 06:59:39,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-18 06:59:39,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-18 06:59:40,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:40,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-18 06:59:40,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:40,966 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-18 06:59:40,966 [ scc.repo] DEBUG ## Branches found: 2024-10-18 06:59:40,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-18 06:59:40,966 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:40,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:40,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 06:59:40,976 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 06:59:40,976 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 06:59:40,981 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 06:59:40,986 [ scc.git] DEBUG Already up to date. 2024-10-18 06:59:40,986 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-18 06:59:41,541 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-18 06:59:41,541 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-18 06:59:41,546 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-18 06:59:41,850 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-18 06:59:41,850 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-18 06:59:41,855 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-18 06:59:42,140 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-18 06:59:42,140 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-18 06:59:42,145 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 06:59:42,145 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:42,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:42,150 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-18 06:59:42,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:42,161 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-18 06:59:42,172 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-18 06:59:42,173 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-18 06:59:42,173 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-18 06:59:42,173 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 06:59:42,173 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 06:59:42,178 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-18 06:59:42,183 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-18 06:59:42,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:42,325 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-18 06:59:42,333 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-18 06:59:42,337 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-18 06:59:42,342 [ scc.config] DEBUG Found github.token 2024-10-18 06:59:42,342 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-18 06:59:42,342 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-18 06:59:42,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:42,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-18 06:59:42,363 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-18 06:59:42,363 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-18 06:59:42,363 [ scc.git] DEBUG Auto-merging setup.py 2024-10-18 06:59:42,363 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-18 06:59:42,363 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-18 06:59:42,363 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-18 06:59:42,363 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-18 06:59:42,364 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 06:59:42,364 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 06:59:42,368 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-18 06:59:42,374 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-18 06:59:42,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:42,706 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-18 06:59:42,713 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-18 06:59:42,718 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-18 06:59:42,722 [ scc.config] DEBUG Found github.token 2024-10-18 06:59:42,722 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-18 06:59:42,723 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-18 06:59:42,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:42,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-18 06:59:42,743 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-18 06:59:42,743 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-18 06:59:42,743 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 06:59:42,746 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-18 06:59:42,746 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-18 06:59:42,746 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-18 06:59:42,746 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-18 06:59:42,746 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-18 06:59:42,746 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-18 06:59:43,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 06:59:43,096 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 06:59:43,143 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 06:59:43,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 06:59:43,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 06:59:43,184 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 06:59:43,191 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac687df0> has no local changes 2024-10-18 06:59:43,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 06:59:43,198 [ scc.git] DEBUG [detached HEAD b915476] merge master -Dorg -Ssuccess-only 2024-10-18 06:59:43,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 06:59:43,199 [ scc.repo] DEBUG ## PRs found: 2024-10-18 06:59:43,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-18 06:59:44,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-18 06:59:44,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-18 06:59:45,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-18 06:59:45,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-18 06:59:45,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-18 06:59:45,989 [ scc.repo] DEBUG # ... Include label: include 2024-10-18 06:59:46,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-18 06:59:47,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:47,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:48,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cb283024150d8f1fe9f02a312cfa2930001d7814 HTTP/1.1" 200 None 2024-10-18 06:59:48,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cb283024150d8f1fe9f02a312cfa2930001d7814?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:48,428 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-18 06:59:48,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-18 06:59:49,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-18 06:59:49,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-18 06:59:50,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:50,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:51,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-18 06:59:51,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:51,708 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-18 06:59:52,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-18 06:59:52,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-18 06:59:53,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-18 06:59:53,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-18 06:59:53,511 [ scc.repo] DEBUG # ... Include label: include 2024-10-18 06:59:54,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-18 06:59:54,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:54,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:55,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bcdf94652b2841ead8d4d9386ea3aff751e64b4a HTTP/1.1" 200 None 2024-10-18 06:59:55,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bcdf94652b2841ead8d4d9386ea3aff751e64b4a?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:55,945 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-18 06:59:56,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-18 06:59:56,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-18 06:59:56,945 [ scc.repo] DEBUG # ... Include label: include 2024-10-18 06:59:57,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-18 06:59:58,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 06:59:58,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 06:59:59,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3e0427ff792396a9b61921fac9f1c8ef656522cd HTTP/1.1" 200 None 2024-10-18 06:59:59,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3e0427ff792396a9b61921fac9f1c8ef656522cd?per_page=1 HTTP/1.1" 200 2 2024-10-18 06:59:59,429 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-18 06:59:59,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-18 07:00:00,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-18 07:00:00,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-18 07:00:00,937 [ scc.repo] DEBUG # ... Include label: include 2024-10-18 07:00:01,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-18 07:00:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:02,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:03,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4069931439f9e3daecd680e02fd1af13f7e2b755 HTTP/1.1" 200 None 2024-10-18 07:00:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4069931439f9e3daecd680e02fd1af13f7e2b755?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:03,480 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-18 07:00:03,481 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:00:03,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-18 07:00:03,481 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:03,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:03,487 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:00:03,493 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:00:03,493 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:00:03,499 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:00:03,505 [ scc.git] DEBUG Already up to date. 2024-10-18 07:00:03,505 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-18 07:00:03,868 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-18 07:00:03,868 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-18 07:00:03,873 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-18 07:00:04,167 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-18 07:00:04,167 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-18 07:00:04,172 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-18 07:00:04,466 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-18 07:00:04,466 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-18 07:00:04,471 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-18 07:00:04,828 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-18 07:00:04,828 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-18 07:00:04,833 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-18 07:00:05,142 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-18 07:00:05,143 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-18 07:00:05,148 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:00:05,148 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:05,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:05,153 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-18 07:00:05,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:05,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 4069931439f9e3daecd680e02fd1af13f7e2b755' 2024-10-18 07:00:05,181 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:05,187 [ scc.git] DEBUG .gitignore | 2 + 2024-10-18 07:00:05,187 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-18 07:00:05,187 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-18 07:00:05,188 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-18 07:00:05,188 [ scc.git] DEBUG 11 files changed, 316 insertions(+), 17 deletions(-) 2024-10-18 07:00:05,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:05,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-18 07:00:05,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:05,333 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 3e0427ff792396a9b61921fac9f1c8ef656522cd' 2024-10-18 07:00:05,356 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-18 07:00:05,356 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-18 07:00:05,356 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-18 07:00:05,356 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:05,362 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-18 07:00:05,362 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-18 07:00:05,362 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-18 07:00:05,362 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-18 07:00:05,362 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-18 07:00:05,363 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-18 07:00:05,363 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-18 07:00:05,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:05,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-18 07:00:05,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:05,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) bcdf94652b2841ead8d4d9386ea3aff751e64b4a' 2024-10-18 07:00:05,746 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:05,751 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-18 07:00:05,751 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-18 07:00:05,751 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-18 07:00:05,751 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-18 07:00:06,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:06,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-18 07:00:06,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:06,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-18 07:00:06,141 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:06,145 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-18 07:00:06,145 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-18 07:00:06,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:06,523 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-18 07:00:06,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:06,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) cb283024150d8f1fe9f02a312cfa2930001d7814' 2024-10-18 07:00:06,559 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-18 07:00:06,559 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-18 07:00:06,559 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-18 07:00:06,559 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-18 07:00:06,559 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:06,565 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-18 07:00:06,565 [ scc.git] DEBUG package.json | 2 +- 2024-10-18 07:00:06,565 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-18 07:00:06,565 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-10-18 07:00:06,565 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-18 07:00:06,565 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-18 07:00:06,565 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-18 07:00:06,565 [ scc.git] DEBUG 7 files changed, 61 insertions(+), 33 deletions(-) 2024-10-18 07:00:06,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:06,909 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:00:06,949 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:06,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:06,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:00:06,990 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:00:07,000 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac688820> has no local changes 2024-10-18 07:00:07,000 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:00:07,013 [ scc.git] DEBUG [detached HEAD a1d59f71] merge master -Dorg -Ssuccess-only 2024-10-18 07:00:07,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:00:07,014 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:00:07,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-18 07:00:08,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-18 07:00:08,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-18 07:00:09,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-18 07:00:09,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:10,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-18 07:00:10,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:10,553 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-18 07:00:10,553 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:00:10,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-18 07:00:10,553 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:10,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:10,559 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:00:10,563 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:00:10,564 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:00:10,568 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:00:10,573 [ scc.git] DEBUG Already up to date. 2024-10-18 07:00:10,574 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-18 07:00:10,923 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-18 07:00:10,923 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-18 07:00:10,927 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:00:10,927 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:10,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:10,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-18 07:00:10,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:10,942 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-18 07:00:10,950 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-18 07:00:10,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:10,953 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-18 07:00:10,953 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-18 07:00:11,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:11,095 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:00:11,134 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:11,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:11,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:00:11,176 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:00:11,183 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac63d4f0> has no local changes 2024-10-18 07:00:11,183 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:00:11,190 [ scc.git] DEBUG [detached HEAD cae29a5] merge master -Dorg -Ssuccess-only 2024-10-18 07:00:11,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:00:11,191 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:00:11,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-18 07:00:12,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-18 07:00:12,078 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:00:12,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-18 07:00:13,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:13,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:14,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-18 07:00:14,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:14,520 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-18 07:00:14,520 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:00:14,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-18 07:00:14,520 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:14,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:14,527 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:00:14,532 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:00:14,532 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:00:14,537 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:00:14,549 [ scc.git] DEBUG Already up to date. 2024-10-18 07:00:14,550 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-18 07:00:14,863 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-18 07:00:14,863 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-18 07:00:14,867 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:00:14,868 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:14,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:14,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-18 07:00:14,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:14,883 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-18 07:00:14,893 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:14,897 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-18 07:00:14,897 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-18 07:00:15,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:15,033 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:00:15,070 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:15,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:15,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:00:15,110 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:00:15,117 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac60c370> has no local changes 2024-10-18 07:00:15,117 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:00:15,124 [ scc.git] DEBUG [detached HEAD e8fee64] merge master -Dorg -Ssuccess-only 2024-10-18 07:00:15,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:00:15,125 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:00:15,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-18 07:00:16,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-18 07:00:16,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-18 07:00:17,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-18 07:00:17,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-18 07:00:17,612 [ scc.repo] DEBUG # ... Include label: include 2024-10-18 07:00:18,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-18 07:00:18,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:19,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:19,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-18 07:00:20,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:20,005 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-18 07:00:20,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-18 07:00:20,477 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:00:21,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-18 07:00:21,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:22,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:22,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-18 07:00:23,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:23,101 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-18 07:00:23,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-18 07:00:24,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-18 07:00:24,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-18 07:00:25,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:25,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:25,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-18 07:00:26,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:26,288 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-18 07:00:26,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-18 07:00:26,734 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:00:27,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-18 07:00:27,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:28,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:29,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-18 07:00:29,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:29,425 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-18 07:00:29,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-18 07:00:29,880 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:00:30,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-18 07:00:31,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:31,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:32,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-18 07:00:32,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:32,590 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-18 07:00:33,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-18 07:00:33,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-18 07:00:33,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-18 07:00:34,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:34,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:35,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-18 07:00:35,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:35,881 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-18 07:00:36,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-18 07:00:36,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-18 07:00:37,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-18 07:00:37,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:38,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:38,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-18 07:00:39,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:39,156 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-18 07:00:39,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-18 07:00:40,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-18 07:00:40,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-18 07:00:40,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:41,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-18 07:00:41,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:41,897 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-18 07:00:41,897 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:00:41,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-18 07:00:41,898 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:41,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:41,904 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:00:41,908 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:00:41,909 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:00:42,051 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:00:42,057 [ scc.git] DEBUG Already up to date. 2024-10-18 07:00:42,058 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-18 07:00:42,368 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:42,368 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-18 07:00:42,372 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-18 07:00:43,185 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:43,185 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-18 07:00:43,190 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-18 07:00:43,494 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:43,494 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-18 07:00:43,499 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-18 07:00:43,792 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:43,792 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-18 07:00:43,797 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-18 07:00:44,110 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:44,110 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-18 07:00:44,114 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-18 07:00:44,400 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:44,400 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-18 07:00:44,404 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-18 07:00:44,694 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:44,694 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-18 07:00:44,698 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-18 07:00:45,047 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-18 07:00:45,048 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-18 07:00:45,052 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:00:45,053 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:45,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:45,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-18 07:00:45,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:45,069 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-18 07:00:45,254 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-18 07:00:45,255 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:45,258 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-18 07:00:45,258 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-18 07:00:45,258 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-18 07:00:45,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:45,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-18 07:00:45,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:45,402 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-18 07:00:45,480 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-18 07:00:45,481 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-18 07:00:45,481 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-18 07:00:45,481 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-18 07:00:45,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:45,485 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-18 07:00:45,485 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-18 07:00:45,485 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-18 07:00:45,485 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-18 07:00:45,485 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-18 07:00:45,485 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-18 07:00:45,485 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-18 07:00:45,485 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-18 07:00:45,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:45,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-18 07:00:45,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:45,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-18 07:00:45,799 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-18 07:00:45,800 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:45,802 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-18 07:00:45,802 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-18 07:00:45,803 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-18 07:00:46,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:46,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-18 07:00:46,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:46,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-18 07:00:46,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:46,205 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-18 07:00:46,205 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-18 07:00:46,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:46,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-18 07:00:46,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:46,574 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-18 07:00:46,606 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-18 07:00:46,607 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:46,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:46,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-18 07:00:46,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:46,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-18 07:00:46,974 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-18 07:00:46,974 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-18 07:00:46,974 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-18 07:00:46,974 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:46,978 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-18 07:00:46,979 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-18 07:00:46,979 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-18 07:00:46,979 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-18 07:00:46,979 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-18 07:00:46,979 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-18 07:00:46,979 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-18 07:00:47,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:47,325 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-18 07:00:47,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:47,337 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-18 07:00:47,372 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-18 07:00:47,373 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:47,381 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-18 07:00:47,381 [ scc.git] DEBUG package.json | 2 +- 2024-10-18 07:00:47,381 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-18 07:00:47,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:47,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-18 07:00:47,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:47,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-18 07:00:47,743 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:47,745 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-18 07:00:47,745 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-18 07:00:48,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:48,099 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:00:48,137 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:48,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:48,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:00:48,179 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:00:48,188 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac644ee0> has no local changes 2024-10-18 07:00:48,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:00:48,197 [ scc.git] DEBUG [detached HEAD bbc0221] merge master -Dorg -Ssuccess-only 2024-10-18 07:00:48,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:00:48,197 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:00:48,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-18 07:00:49,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-18 07:00:49,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-18 07:00:49,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-18 07:00:50,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:51,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:00:51,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-18 07:00:51,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-18 07:00:52,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-18 07:00:52,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:53,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-18 07:00:53,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:53,869 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-18 07:00:53,869 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:00:53,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-18 07:00:53,869 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:53,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:53,875 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:00:53,880 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:00:53,880 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:00:53,885 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:00:53,890 [ scc.git] DEBUG Already up to date. 2024-10-18 07:00:53,890 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-18 07:00:54,203 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-18 07:00:54,203 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-18 07:00:54,208 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:00:54,208 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:54,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:54,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-18 07:00:54,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:54,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-18 07:00:54,234 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:00:54,236 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-18 07:00:54,237 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-18 07:00:54,237 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-18 07:00:54,237 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-18 07:00:54,237 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-18 07:00:54,237 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-18 07:00:54,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:00:54,420 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:00:54,459 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:00:54,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:00:54,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:00:54,502 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:00:54,508 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac607370> has no local changes 2024-10-18 07:00:54,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:00:54,516 [ scc.git] DEBUG [detached HEAD 3ee19a3] merge master -Dorg -Ssuccess-only 2024-10-18 07:00:54,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:00:54,517 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:00:54,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-18 07:00:55,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-18 07:00:55,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-18 07:00:56,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-18 07:00:56,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:00:57,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-18 07:00:57,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:00:57,746 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-18 07:00:58,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-18 07:00:58,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-18 07:00:59,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-18 07:00:59,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:00,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-18 07:01:00,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:00,632 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-18 07:01:01,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-18 07:01:01,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-18 07:01:02,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-18 07:01:02,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:02,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-18 07:01:03,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:03,344 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-18 07:01:03,344 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:03,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-18 07:01:03,344 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:03,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:03,351 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:03,355 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:03,356 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:03,362 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:03,367 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:03,367 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-18 07:01:03,679 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-18 07:01:03,679 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-18 07:01:03,683 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-18 07:01:04,265 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-18 07:01:04,265 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-18 07:01:04,270 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-18 07:01:04,574 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-18 07:01:04,575 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-18 07:01:04,579 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:04,579 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:04,579 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:04,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-18 07:01:04,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:04,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-18 07:01:04,613 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-18 07:01:04,613 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-18 07:01:04,613 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-18 07:01:04,613 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-18 07:01:04,614 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 07:01:04,614 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 07:01:04,621 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-18 07:01:04,628 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-18 07:01:04,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:04,760 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-18 07:01:04,768 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-18 07:01:04,774 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-10-18 07:01:04,778 [ scc.config] DEBUG Found github.token 2024-10-18 07:01:04,779 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-18 07:01:04,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-18 07:01:04,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:04,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-18 07:01:04,805 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-18 07:01:04,805 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-18 07:01:04,805 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-18 07:01:04,805 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 07:01:04,806 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 07:01:04,812 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-18 07:01:04,818 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-18 07:01:05,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:05,140 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-18 07:01:05,148 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-18 07:01:05,154 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-18 07:01:05,160 [ scc.config] DEBUG Found github.token 2024-10-18 07:01:05,160 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-18 07:01:05,160 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-18 07:01:05,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:05,172 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-18 07:01:05,182 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:05,185 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-18 07:01:05,185 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-18 07:01:05,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:05,526 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:05,568 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:05,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:05,574 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:05,613 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:05,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac606ee0> has no local changes 2024-10-18 07:01:05,621 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:05,629 [ scc.git] DEBUG [detached HEAD 46439a3] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:05,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:05,630 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:06,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-18 07:01:06,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-18 07:01:06,559 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:01:07,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-18 07:01:07,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:08,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:01:08,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-18 07:01:09,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:09,198 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-18 07:01:09,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-18 07:01:09,680 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:01:10,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-18 07:01:10,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:11,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:01:11,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-18 07:01:12,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:12,240 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-18 07:01:12,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-18 07:01:12,733 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-18 07:01:13,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-18 07:01:13,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:14,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:01:14,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-18 07:01:15,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:15,233 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-18 07:01:15,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-18 07:01:16,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-18 07:01:16,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-18 07:01:17,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-18 07:01:17,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-18 07:01:18,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-18 07:01:18,033 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:18,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-18 07:01:18,033 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:18,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:18,039 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:18,044 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:18,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:18,050 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:18,055 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:18,056 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-18 07:01:18,395 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-18 07:01:18,395 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-18 07:01:18,399 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-18 07:01:18,708 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-18 07:01:18,709 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-18 07:01:18,712 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-18 07:01:19,019 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-18 07:01:19,019 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-18 07:01:19,023 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:19,023 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:19,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:19,030 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-18 07:01:19,036 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:19,041 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-18 07:01:19,050 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:19,052 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-18 07:01:19,052 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-18 07:01:19,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:19,184 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-18 07:01:19,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:19,195 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-18 07:01:19,206 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-18 07:01:19,207 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:19,209 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-18 07:01:19,209 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-18 07:01:19,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:19,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-18 07:01:19,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:19,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-18 07:01:19,592 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-18 07:01:19,593 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:19,596 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-18 07:01:19,596 [ scc.git] DEBUG package.json | 2 +- 2024-10-18 07:01:19,596 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-18 07:01:19,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:19,952 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:19,991 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:19,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:19,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:20,033 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:20,040 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac613be0> has no local changes 2024-10-18 07:01:20,041 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:20,050 [ scc.git] DEBUG [detached HEAD 9ad6efd] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:20,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:20,050 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:20,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-18 07:01:20,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-18 07:01:21,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-18 07:01:21,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:22,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-18 07:01:22,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:22,649 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-18 07:01:22,649 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:22,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-18 07:01:22,649 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:22,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:22,655 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:22,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:22,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:22,666 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:22,672 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:22,672 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-18 07:01:23,053 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-18 07:01:23,054 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-18 07:01:23,058 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:23,058 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:23,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:23,065 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-18 07:01:23,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:23,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-18 07:01:23,083 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:23,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:23,215 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:23,253 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:23,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:23,259 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:23,296 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:23,302 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac5d7fa0> has no local changes 2024-10-18 07:01:23,302 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:23,310 [ scc.git] DEBUG [detached HEAD fa1b80a] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:23,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:23,310 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:23,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-18 07:01:24,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-18 07:01:24,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-18 07:01:25,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-18 07:01:25,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-18 07:01:26,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:26,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-18 07:01:26,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:26,975 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-18 07:01:26,975 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:26,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-18 07:01:26,975 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:26,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:26,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:26,987 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:26,987 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:26,993 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:26,998 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:26,998 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-18 07:01:27,305 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-18 07:01:27,305 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-18 07:01:27,310 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:27,310 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:27,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:27,316 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-18 07:01:27,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:27,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-18 07:01:27,334 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-18 07:01:27,335 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:27,337 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-18 07:01:27,337 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-18 07:01:27,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:27,482 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:27,521 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:27,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:27,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:27,564 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:27,570 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac5cbdf0> has no local changes 2024-10-18 07:01:27,570 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:27,578 [ scc.git] DEBUG [detached HEAD f26316b] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:27,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:27,578 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:28,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-18 07:01:28,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-18 07:01:28,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-18 07:01:29,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-18 07:01:29,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:30,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-18 07:01:30,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:30,919 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-18 07:01:30,919 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:30,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-18 07:01:30,919 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:30,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:30,925 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:30,929 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:30,929 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:30,934 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:30,939 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:30,940 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-18 07:01:31,305 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-18 07:01:31,305 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-18 07:01:31,310 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:31,310 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:31,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:31,318 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-18 07:01:31,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:31,329 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-18 07:01:31,339 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-18 07:01:31,339 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-18 07:01:31,339 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-18 07:01:31,339 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-18 07:01:31,339 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-18 07:01:31,339 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-18 07:01:31,339 [ scc.git] DEBUG Auto-merging setup.py 2024-10-18 07:01:31,340 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-18 07:01:31,340 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 07:01:31,340 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 07:01:31,345 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-18 07:01:31,350 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-18 07:01:31,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:31,486 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-18 07:01:31,492 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-18 07:01:31,498 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py - setup.py --conflicts 2024-10-18 07:01:31,502 [ scc.config] DEBUG Found github.token 2024-10-18 07:01:31,502 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-18 07:01:31,502 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:31,542 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:31,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:31,548 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:31,584 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:31,591 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac5d27c0> has no local changes 2024-10-18 07:01:31,591 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:31,599 [ scc.git] DEBUG [detached HEAD 47126be] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:31,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:31,600 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:31,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-18 07:01:32,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-18 07:01:32,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-18 07:01:33,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-18 07:01:33,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:34,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-18 07:01:34,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:34,834 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-18 07:01:34,834 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:34,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-18 07:01:34,835 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:34,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:34,841 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:34,845 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:34,845 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:34,850 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:34,855 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:34,856 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-18 07:01:35,203 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-18 07:01:35,203 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-18 07:01:35,207 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:35,207 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:35,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:35,214 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-18 07:01:35,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:35,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-18 07:01:35,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-18 07:01:35,240 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-18 07:01:35,242 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-18 07:01:35,242 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-18 07:01:35,242 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-18 07:01:35,242 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-18 07:01:35,243 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-18 07:01:35,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:35,371 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:35,411 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:35,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:35,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:35,453 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:35,460 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac5d75b0> has no local changes 2024-10-18 07:01:35,460 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:35,469 [ scc.git] DEBUG [detached HEAD bec00b3] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:35,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:35,470 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:35,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-18 07:01:35,781 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:35,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-18 07:01:35,782 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:35,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:35,787 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:35,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:35,792 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:35,798 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:35,802 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:35,803 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:35,803 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:35,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:35,807 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:35,845 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:35,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:35,851 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:35,888 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:35,894 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac5912e0> has no local changes 2024-10-18 07:01:35,894 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:35,903 [ scc.git] DEBUG [detached HEAD d4a73b1] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:35,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:35,904 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:36,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-18 07:01:36,187 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:36,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-18 07:01:36,187 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:36,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:36,192 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:36,197 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:36,197 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:36,202 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:36,207 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:36,207 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:36,207 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:36,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:36,212 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:36,249 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:36,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:36,254 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:36,292 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:36,298 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac53ba00> has no local changes 2024-10-18 07:01:36,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:36,306 [ scc.git] DEBUG [detached HEAD d340712] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:36,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:36,306 [ scc.git] INFO Overriding base-branch from master to main 2024-10-18 07:01:36,306 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:36,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-18 07:01:37,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-18 07:01:37,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-18 07:01:38,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-18 07:01:38,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-18 07:01:38,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:39,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-18 07:01:39,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:39,840 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-18 07:01:39,840 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:39,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-18 07:01:39,841 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:39,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:39,847 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-18 07:01:39,852 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:39,852 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-18 07:01:39,858 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-18 07:01:39,864 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:39,864 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-18 07:01:40,185 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-18 07:01:40,185 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-18 07:01:40,189 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:40,189 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:40,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:40,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-18 07:01:40,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:40,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-18 07:01:40,215 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-18 07:01:40,215 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-18 07:01:40,215 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 07:01:40,215 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 07:01:40,220 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-18 07:01:40,226 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-18 07:01:40,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:40,356 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-18 07:01:40,363 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-18 07:01:40,368 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-18 07:01:40,372 [ scc.config] DEBUG Found github.token 2024-10-18 07:01:40,372 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-18 07:01:40,372 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:40,409 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:40,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:40,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:40,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:40,458 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac58aeb0> has no local changes 2024-10-18 07:01:40,458 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:40,466 [ scc.git] DEBUG [detached HEAD 79cd05d] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:40,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:40,466 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:40,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-18 07:01:40,834 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:40,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-18 07:01:40,835 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:40,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:40,841 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:40,846 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:40,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:40,851 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:40,857 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:40,857 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:40,857 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:40,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:40,862 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:40,900 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:40,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:40,906 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:40,944 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:40,950 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac53b7c0> has no local changes 2024-10-18 07:01:40,950 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:40,957 [ scc.git] DEBUG [detached HEAD 904f6af] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:40,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:40,958 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:41,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-18 07:01:41,243 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:41,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-18 07:01:41,243 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:41,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:41,249 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:41,255 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:41,255 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:41,260 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:41,266 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:41,266 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:41,266 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:41,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:41,270 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:41,307 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:41,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:41,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:41,350 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:41,356 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac55be80> has no local changes 2024-10-18 07:01:41,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:41,364 [ scc.git] DEBUG [detached HEAD 441f185] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:41,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:41,364 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:41,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-18 07:01:42,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-18 07:01:42,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-18 07:01:43,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-18 07:01:43,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:44,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-18 07:01:44,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:44,505 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-18 07:01:44,505 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:44,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-18 07:01:44,506 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:44,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:44,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-18 07:01:44,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:44,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-18 07:01:44,523 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-18 07:01:44,530 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:44,530 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-18 07:01:44,844 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-18 07:01:44,844 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-18 07:01:44,848 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:44,848 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:44,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:44,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-18 07:01:44,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:44,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-18 07:01:44,875 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-18 07:01:44,875 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-18 07:01:44,875 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 07:01:44,875 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 07:01:44,881 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-18 07:01:44,888 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-18 07:01:45,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:45,015 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-18 07:01:45,022 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-18 07:01:45,028 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-18 07:01:45,034 [ scc.config] DEBUG Found github.token 2024-10-18 07:01:45,034 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-18 07:01:45,034 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:45,071 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:45,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:45,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:45,114 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:45,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac552fa0> has no local changes 2024-10-18 07:01:45,121 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:45,129 [ scc.git] DEBUG [detached HEAD fea945e] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:45,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:45,129 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-18 07:01:45,129 [ scc.repo] DEBUG ## PRs found: 2024-10-18 07:01:45,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-18 07:01:46,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-18 07:01:46,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-18 07:01:46,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-18 07:01:47,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:47,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-18 07:01:48,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-18 07:01:48,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:48,674 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-18 07:01:49,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-18 07:01:49,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-18 07:01:50,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-18 07:01:50,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-18 07:01:51,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-18 07:01:51,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-18 07:01:52,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-18 07:01:52,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-18 07:01:53,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-18 07:01:53,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-18 07:01:53,432 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-18 07:01:53,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-18 07:01:54,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-18 07:01:54,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-18 07:01:55,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-18 07:01:55,350 [ scc.repo] DEBUG ## Branches found: 2024-10-18 07:01:55,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-18 07:01:55,350 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:55,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:55,356 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-18 07:01:55,360 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-18 07:01:55,360 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-18 07:01:55,365 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-18 07:01:55,371 [ scc.git] DEBUG Already up to date. 2024-10-18 07:01:55,371 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-18 07:01:55,691 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-18 07:01:55,692 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-18 07:01:55,695 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-18 07:01:56,027 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-18 07:01:56,027 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-18 07:01:56,031 [ scc.git] DEBUG ## Unique users: [] 2024-10-18 07:01:56,031 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:56,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:56,036 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-18 07:01:56,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:56,047 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-18 07:01:56,058 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-18 07:01:56,058 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-18 07:01:56,058 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-18 07:01:56,059 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-18 07:01:56,064 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-18 07:01:56,069 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-18 07:01:56,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:56,206 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-18 07:01:56,213 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-18 07:01:56,219 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#215](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-18 07:01:56,223 [ scc.config] DEBUG Found github.token 2024-10-18 07:01:56,224 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-18 07:01:56,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-18 07:01:56,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:56,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-18 07:01:56,244 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-18 07:01:56,247 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-18 07:01:56,247 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-18 07:01:56,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:56,615 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-18 07:01:56,655 [ scc.git] DEBUG Get sha1 of %s 2024-10-18 07:01:56,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-18 07:01:56,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:56,698 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:01:56,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ac49c520> has no local changes 2024-10-18 07:01:56,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:01:56,712 [ scc.git] DEBUG [detached HEAD 844973b] merge master -Dorg -Ssuccess-only 2024-10-18 07:01:56,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:01:56,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-18 07:01:56,785 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-18 07:01:57,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:57,013 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-18 07:01:57,019 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-18 07:01:57,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:57,396 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-18 07:01:57,401 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-18 07:01:57,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:57,783 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-18 07:01:57,788 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-18 07:01:58,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:58,182 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-18 07:01:58,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:58,574 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-18 07:01:58,578 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-18 07:01:58,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:58,955 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-18 07:01:58,960 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-18 07:01:59,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:59,334 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-18 07:01:59,338 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-18 07:01:59,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:01:59,725 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-18 07:01:59,729 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-18 07:02:00,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:00,108 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-18 07:02:00,112 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-18 07:02:00,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:00,487 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-18 07:02:00,491 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-18 07:02:00,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:00,875 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-18 07:02:00,880 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-18 07:02:01,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:01,267 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-18 07:02:01,271 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-18 07:02:01,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:01,655 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-18 07:02:02,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:02,066 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-18 07:02:02,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:02,456 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-18 07:02:02,461 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-18 07:02:02,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:02,840 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-18 07:02:03,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:03,246 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-18 07:02:03,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:03,637 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-18 07:02:03,642 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-18 07:02:04,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:04,018 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-18 07:02:04,023 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-18 07:02:04,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:04,408 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-18 07:02:04,412 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-18 07:02:04,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:04,797 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-18 07:02:04,801 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-18 07:02:05,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-18 07:02:05,219 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-18 07:02:05,219 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-18 07:02:05,294 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f38ad988fd0> has local changes 2024-10-18 07:02:05,294 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#215 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/215/)' 2024-10-18 07:02:05,308 [ scc.git] DEBUG [detached HEAD 67790e4] merge master -Dorg -Ssuccess-only 2024-10-18 07:02:05,309 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-18 07:02:05,309 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-18 07:02:05,309 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,309 [ scc.merge] INFO 2024-10-18 07:02:05,309 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,309 [ scc.merge] INFO - PR 393 dependabot[bot] 'Bump omero-figure from `5f62399` to `1c0e5f9`' 2024-10-18 07:02:05,309 [ scc.merge] INFO 2024-10-18 07:02:05,309 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-18 07:02:05,309 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,309 [ scc.merge] INFO 2024-10-18 07:02:05,309 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,309 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-18 07:02:05,309 [ scc.merge] INFO 2024-10-18 07:02:05,309 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-18 07:02:05,309 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,309 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-18 07:02:05,309 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,309 [ scc.merge] INFO 2024-10-18 07:02:05,309 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,309 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-18 07:02:05,309 [ scc.merge] INFO 2024-10-18 07:02:05,309 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-18 07:02:05,309 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,309 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-18 07:02:05,310 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-18 07:02:05,310 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-18 07:02:05,310 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-18 07:02:05,310 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-18 07:02:05,310 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-18 07:02:05,310 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-18 07:02:05,310 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,310 [ scc.merge] INFO 2024-10-18 07:02:05,310 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-18 07:02:05,311 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-18 07:02:05,311 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-18 07:02:05,311 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-18 07:02:05,311 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-18 07:02:05,311 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-18 07:02:05,311 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,311 [ scc.merge] INFO 2024-10-18 07:02:05,311 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,311 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-18 07:02:05,312 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-18 07:02:05,312 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-18 07:02:05,312 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-18 07:02:05,312 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-18 07:02:05,312 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-18 07:02:05,312 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-18 07:02:05,312 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-18 07:02:05,312 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,312 [ scc.merge] INFO 2024-10-18 07:02:05,312 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-18 07:02:05,313 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Repository: ome/scripts 2024-10-18 07:02:05,313 [ scc.merge] INFO Excluded PRs: 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-18 07:02:05,313 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-18 07:02:05,313 [ scc.merge] INFO Already up to date. 2024-10-18 07:02:05,313 [ scc.merge] INFO 2024-10-18 07:02:05,313 [ scc.merge] INFO Merged PRs: 2024-10-18 07:02:05,314 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-18 07:02:05,314 [ scc.merge] INFO 2024-10-18 07:02:05,314 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-18 07:02:05,314 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-18 07:02:05,314 [ scc.merge] INFO 2024-10-18 07:02:05,314 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-18 07:02:05,314 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-18 07:02:05,319 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-18 07:02:05,324 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-18 07:02:05,330 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-18 07:02:05,335 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-18 07:02:05,340 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-18 07:02:05,345 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-18 07:02:05,349 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-18 07:02:05,355 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-18 07:02:05,361 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-18 07:02:05,366 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-18 07:02:05,371 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-18 07:02:05,375 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-18 07:02:05,380 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-18 07:02:05,385 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-18 07:02:05,389 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-18 07:02:05,394 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-18 07:02:05,399 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-18 07:02:05,404 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-18 07:02:05,409 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-18 07:02:05,415 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-18 07:02:05,419 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-18 07:02:05,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-18 07:02:05,424 [ scc.git] DEBUG Calling 'git remote' 2024-10-18 07:02:05,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD a3a58de] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c0e5f95 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 352192a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-18 07:02:50,180 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-18 07:02:58,915 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-18 07:03:01,258 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-18 07:03:05,713 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-18 07:03:46,713 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS