Started by upstream project "Trigger" build number 667 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 588 [Pipeline] sh > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2025.10.5-py3-none-any.whl (163 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.10.5 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-10-27 00:39:21,913 [ scc.config] DEBUG Found github.token 2025-10-27 00:39:21,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-27 00:39:22,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:22,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:22,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-27 00:39:22,919 [ scc.gh] DEBUG 4245 remaining from 5000 (Reset at 01:10 2025-10-27 00:39:22,920 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:22,922 [ scc.git] DEBUG Check current status 2025-10-27 00:39:22,922 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:22,925 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-27 00:39:22,925 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:22,969 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-27 00:39:22,972 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-27 00:39:22,975 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-27 00:39:22,978 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-27 00:39:22,983 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-10-27 00:39:22,985 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-27 00:39:22,988 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-27 00:39:22,991 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-10-27 00:39:22,994 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-27 00:39:22,997 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-27 00:39:23,000 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-27 00:39:23,003 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-27 00:39:23,006 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-27 00:39:23,009 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-27 00:39:23,012 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-27 00:39:23,014 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-27 00:39:23,017 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-27 00:39:23,019 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-27 00:39:23,022 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-27 00:39:23,025 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-27 00:39:23,027 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-27 00:39:23,031 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-10-27 00:39:23,034 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:23,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-10-27 00:39:23,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:24,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:24,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:25,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:25,134 [ scc.git] DEBUG Resetting... 2025-10-27 00:39:25,134 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-27 00:39:25,141 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-27 00:39:25,141 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-27 00:39:25,235 [ scc.git] DEBUG Check current status 2025-10-27 00:39:25,235 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:25,237 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-10-27 00:39:25,238 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:25,280 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-27 00:39:25,283 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-27 00:39:25,286 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-27 00:39:25,289 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-27 00:39:25,293 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-10-27 00:39:25,296 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-27 00:39:25,299 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-27 00:39:25,302 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-10-27 00:39:25,305 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-27 00:39:25,307 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-27 00:39:25,310 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-27 00:39:25,313 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-27 00:39:25,316 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-27 00:39:25,319 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-27 00:39:25,322 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-27 00:39:25,325 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-27 00:39:25,327 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-27 00:39:25,330 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-27 00:39:25,332 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-27 00:39:25,335 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-27 00:39:25,338 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-27 00:39:25,342 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-10-27 00:39:25,342 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-27 00:39:25,343 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-27 00:39:25,343 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-27 00:39:25,343 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-27 00:39:25,343 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-27 00:39:25,343 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:39:25,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-10-27 00:39:26,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-10-27 00:39:26,157 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:39:26,157 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-27 00:39:26,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-10-27 00:39:26,618 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:39:26,619 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-27 00:39:27,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-10-27 00:39:27,090 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:39:27,090 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-27 00:39:27,090 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:39:27,090 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:39:27,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:39:27,093 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:39:27,095 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:39:27,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:39:27,098 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:39:27,100 [ scc.git] DEBUG Already up to date. 2025-10-27 00:39:27,100 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-10-27 00:39:27,393 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-27 00:39:27,393 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-10-27 00:39:27,400 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-10-27 00:39:27,679 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-27 00:39:27,679 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-10-27 00:39:27,685 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-10-27 00:39:27,962 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-27 00:39:27,962 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-10-27 00:39:27,967 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:39:27,968 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:39:27,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:39:27,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-27 00:39:27,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:39:27,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-27 00:39:27,986 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:39:27,988 [ scc.git] DEBUG scripts | 2 +- 2025-10-27 00:39:27,989 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:39:28,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:28,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-27 00:39:28,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:39:28,238 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-27 00:39:28,251 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:39:28,253 [ scc.git] DEBUG omero-figure | 2 +- 2025-10-27 00:39:28,253 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:39:28,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:28,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-27 00:39:28,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:39:28,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-27 00:39:28,685 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:39:28,687 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-10-27 00:39:28,687 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:39:29,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:29,053 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:39:29,110 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-10-27 00:39:29,134 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-10-27 00:39:29,147 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-10-27 00:39:29,148 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:39:29,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:39:29,150 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:39:29,222 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f50ecfea4d0> has no local changes 2025-10-27 00:39:29,222 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:39:29,288 [ scc.git] DEBUG [detached HEAD c4d78d2] merge master -Dorg -Snone 2025-10-27 00:39:29,288 [ scc.merge] INFO Repository: ome/omero-plugins 2025-10-27 00:39:29,288 [ scc.merge] INFO Already up to date. 2025-10-27 00:39:29,289 [ scc.merge] INFO 2025-10-27 00:39:29,289 [ scc.merge] INFO Merged PRs: 2025-10-27 00:39:29,289 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-27 00:39:29,289 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-27 00:39:29,289 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-27 00:39:29,289 [ scc.merge] INFO 2025-10-27 00:39:29,289 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-27 00:39:29,289 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out 'baab5c06714c374450f7312b1563a593bde691c3' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-10-27 00:39:36,293 [ scc.config] DEBUG Found github.token 2025-10-27 00:39:36,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-10-27 00:39:36,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:36,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:39:37,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-10-27 00:39:37,266 [ scc.gh] DEBUG 4231 remaining from 5000 (Reset at 01:10 2025-10-27 00:39:37,266 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:37,268 [ scc.git] DEBUG Check current status 2025-10-27 00:39:37,268 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:37,271 [ scc.git] DEBUG c4d78d2 merge master -Dorg -Snone 2025-10-27 00:39:37,271 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:37,314 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-27 00:39:37,317 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-27 00:39:37,320 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-27 00:39:37,323 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-10-27 00:39:37,330 [ scc.git] DEBUG +baab5c06714c374450f7312b1563a593bde691c3 omero-figure (v7.2.1-106-gbaab5c06) 2025-10-27 00:39:37,333 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-27 00:39:37,336 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-27 00:39:37,340 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-10-27 00:39:37,343 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-27 00:39:37,345 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-10-27 00:39:37,348 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-27 00:39:37,351 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-27 00:39:37,354 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-27 00:39:37,357 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-27 00:39:37,360 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-27 00:39:37,363 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-27 00:39:37,365 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-10-27 00:39:37,368 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-10-27 00:39:37,371 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-27 00:39:37,373 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-27 00:39:37,376 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-27 00:39:37,380 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116) 2025-10-27 00:39:37,382 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:37,382 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-10-27 00:39:37,384 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-10-27 00:39:37,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-10-27 00:39:38,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:38,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:39,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:39,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:39,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:39,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-27 00:39:39,672 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:39,674 [ scc.git] DEBUG Check current status 2025-10-27 00:39:39,674 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:39,676 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-10-27 00:39:39,676 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:39,712 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:40,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-10-27 00:39:40,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:41,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:41,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:41,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:41,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:41,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:41,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-27 00:39:41,881 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:41,883 [ scc.git] DEBUG Check current status 2025-10-27 00:39:41,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:41,885 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-10-27 00:39:41,886 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:41,923 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:42,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-10-27 00:39:42,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:43,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:43,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:44,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:44,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:44,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:44,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-27 00:39:44,306 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:44,308 [ scc.git] DEBUG Check current status 2025-10-27 00:39:44,308 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:44,310 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-10-27 00:39:44,310 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:44,347 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:44,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-10-27 00:39:45,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:45,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:46,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:46,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:46,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:46,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:46,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-27 00:39:46,603 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:46,605 [ scc.git] DEBUG Check current status 2025-10-27 00:39:46,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:46,607 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-10-27 00:39:46,607 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:46,644 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:47,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-10-27 00:39:47,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:48,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:48,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:48,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:48,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:49,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:49,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-27 00:39:49,030 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:49,032 [ scc.git] DEBUG Check current status 2025-10-27 00:39:49,032 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:49,035 [ scc.git] DEBUG baab5c06 Merge pull request #612 from will-moore/script_version 2025-10-27 00:39:49,035 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:49,075 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:49,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-10-27 00:39:49,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:50,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:50,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:51,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:51,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:51,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:51,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-27 00:39:51,284 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:51,286 [ scc.git] DEBUG Check current status 2025-10-27 00:39:51,286 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:51,288 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-10-27 00:39:51,288 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:51,326 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:51,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-10-27 00:39:52,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:52,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:53,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:53,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:53,440 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:53,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:53,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-27 00:39:53,479 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:53,481 [ scc.git] DEBUG Check current status 2025-10-27 00:39:53,481 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:53,484 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-10-27 00:39:53,484 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:53,521 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:53,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-10-27 00:39:54,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:54,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:55,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:55,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:55,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:55,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:55,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-27 00:39:55,690 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:55,692 [ scc.git] DEBUG Check current status 2025-10-27 00:39:55,692 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:55,695 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-10-27 00:39:55,695 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:55,732 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:56,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-10-27 00:39:56,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:57,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:57,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:39:57,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:39:57,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:39:57,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:39:57,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-27 00:39:57,934 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:39:57,936 [ scc.git] DEBUG Check current status 2025-10-27 00:39:57,936 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:39:57,938 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-10-27 00:39:57,938 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:39:57,977 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:39:58,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-10-27 00:39:58,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:39:59,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:39:59,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:00,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:00,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:00,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:00,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-27 00:40:00,290 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:00,291 [ scc.git] DEBUG Check current status 2025-10-27 00:40:00,291 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:00,293 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-27 00:40:00,294 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:00,331 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:00,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-10-27 00:40:01,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:01,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:02,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:02,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:02,529 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:02,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:02,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-27 00:40:02,567 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:02,569 [ scc.git] DEBUG Check current status 2025-10-27 00:40:02,569 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:02,571 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-10-27 00:40:02,572 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:02,609 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:03,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-10-27 00:40:03,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:03,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:04,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:04,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:04,845 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:04,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:04,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-27 00:40:04,885 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:04,887 [ scc.git] DEBUG Check current status 2025-10-27 00:40:04,887 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:04,889 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-10-27 00:40:04,889 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:04,927 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:05,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-10-27 00:40:05,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:06,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:06,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:07,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:07,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:07,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:07,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-27 00:40:07,053 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:07,055 [ scc.git] DEBUG Check current status 2025-10-27 00:40:07,055 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:07,057 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-10-27 00:40:07,057 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:07,093 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:07,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-10-27 00:40:07,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:08,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:08,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:09,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:09,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:09,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-27 00:40:09,277 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:09,279 [ scc.git] DEBUG Check current status 2025-10-27 00:40:09,279 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:09,282 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-10-27 00:40:09,282 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:09,318 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:09,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-10-27 00:40:10,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:10,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:11,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:11,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:11,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:11,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:11,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-27 00:40:11,515 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:11,517 [ scc.git] DEBUG Check current status 2025-10-27 00:40:11,517 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:11,519 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2025-10-27 00:40:11,520 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:11,556 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:11,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-27 00:40:11,892 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-27 00:40:12,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-10-27 00:40:12,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:13,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:13,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:13,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:13,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:14,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:14,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-27 00:40:14,014 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:14,016 [ scc.git] DEBUG Check current status 2025-10-27 00:40:14,016 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:14,018 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-10-27 00:40:14,019 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:14,056 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:14,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-10-27 00:40:15,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:18,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:18,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:19,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:19,084 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:19,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:19,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-27 00:40:19,120 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:19,122 [ scc.git] DEBUG Check current status 2025-10-27 00:40:19,122 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:19,124 [ scc.git] DEBUG 160d894 Fix display of code 2025-10-27 00:40:19,124 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:19,162 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:19,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-10-27 00:40:20,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:20,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:21,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:21,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:21,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:21,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:21,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-27 00:40:21,505 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:21,507 [ scc.git] DEBUG Check current status 2025-10-27 00:40:21,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:21,509 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-10-27 00:40:21,509 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:21,545 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:21,545 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-10-27 00:40:22,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-10-27 00:40:22,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:22,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:23,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:23,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:23,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:23,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:23,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-27 00:40:23,811 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:23,813 [ scc.git] DEBUG Check current status 2025-10-27 00:40:23,813 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:23,815 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-10-27 00:40:23,816 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:23,853 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:24,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-27 00:40:24,231 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-27 00:40:24,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-10-27 00:40:25,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:25,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:25,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:26,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:26,260 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:26,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:26,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-27 00:40:26,297 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:26,299 [ scc.git] DEBUG Check current status 2025-10-27 00:40:26,299 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:26,301 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-10-27 00:40:26,301 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:26,337 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:26,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-27 00:40:26,685 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-27 00:40:26,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-10-27 00:40:27,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:27,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:28,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:28,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:28,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:28,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:28,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-27 00:40:28,703 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:28,704 [ scc.git] DEBUG Check current status 2025-10-27 00:40:28,705 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:28,707 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-10-27 00:40:28,707 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:28,743 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:29,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-10-27 00:40:29,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:30,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:30,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:30,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:30,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:31,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:31,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-27 00:40:31,026 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-10-27 00:40:31,028 [ scc.git] DEBUG Check current status 2025-10-27 00:40:31,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:31,030 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-27 00:40:31,031 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:31,066 [ scc.config] DEBUG Found remote.origin.url 2025-10-27 00:40:31,066 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-10-27 00:40:31,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-27 00:40:31,406 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-27 00:40:31,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-10-27 00:40:32,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-10-27 00:40:32,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-10-27 00:40:32,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-10-27 00:40:33,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-10-27 00:40:33,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:33,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:33,397 [ scc.git] DEBUG Resetting... 2025-10-27 00:40:33,397 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-10-27 00:40:33,404 [ scc.git] DEBUG HEAD is now at c4d78d2 merge master -Dorg -Snone 2025-10-27 00:40:33,404 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-10-27 00:40:33,458 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-10-27 00:40:33,481 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-10-27 00:40:33,500 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-10-27 00:40:33,514 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-10-27 00:40:33,540 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-10-27 00:40:33,551 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-10-27 00:40:33,573 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-10-27 00:40:33,576 [ scc.git] DEBUG Check current status 2025-10-27 00:40:33,576 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-10-27 00:40:33,579 [ scc.git] DEBUG c4d78d2 merge master -Dorg -Snone 2025-10-27 00:40:33,579 [ scc.git] DEBUG Calling 'git submodule status' 2025-10-27 00:40:33,620 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-10-27 00:40:33,623 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-10-27 00:40:33,626 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-10-27 00:40:33,629 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-10-27 00:40:33,633 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-10-27 00:40:33,636 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-10-27 00:40:33,639 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-10-27 00:40:33,642 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-10-27 00:40:33,645 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-10-27 00:40:33,648 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-10-27 00:40:33,650 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-10-27 00:40:33,653 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-10-27 00:40:33,656 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-10-27 00:40:33,659 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-10-27 00:40:33,662 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-10-27 00:40:33,665 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-10-27 00:40:33,667 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-10-27 00:40:33,670 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-10-27 00:40:33,673 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-10-27 00:40:33,675 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-10-27 00:40:33,678 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-10-27 00:40:33,681 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-10-27 00:40:33,682 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-10-27 00:40:33,682 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-10-27 00:40:33,682 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-10-27 00:40:33,682 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-10-27 00:40:33,682 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-10-27 00:40:33,682 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-10-27 00:40:33,682 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:40:33,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-10-27 00:40:34,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-10-27 00:40:34,450 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:40:35,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-10-27 00:40:35,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:35,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-10-27 00:40:36,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:36,413 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-27 00:40:36,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-10-27 00:40:36,894 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:40:37,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-10-27 00:40:37,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:38,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-10-27 00:40:38,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:38,819 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-27 00:40:39,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-10-27 00:40:39,339 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:40:39,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-10-27 00:40:40,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:40,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-10-27 00:40:41,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:41,266 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-27 00:40:41,266 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:40:41,266 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:41,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:41,269 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:40:41,271 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:40:41,271 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:40:41,273 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:40:41,276 [ scc.git] DEBUG Already up to date. 2025-10-27 00:40:41,276 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-10-27 00:40:41,578 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-27 00:40:41,578 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-10-27 00:40:41,584 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-10-27 00:40:41,864 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-27 00:40:41,864 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-10-27 00:40:41,871 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-10-27 00:40:42,151 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-10-27 00:40:42,151 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-10-27 00:40:42,157 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:40:42,157 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:42,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:42,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-27 00:40:42,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:42,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-10-27 00:40:42,166 [ scc.git] DEBUG Already up to date. 2025-10-27 00:40:42,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:40:42,325 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-27 00:40:42,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:42,329 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-10-27 00:40:42,332 [ scc.git] DEBUG Already up to date. 2025-10-27 00:40:42,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:40:42,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-27 00:40:42,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:42,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-10-27 00:40:42,719 [ scc.git] DEBUG Already up to date. 2025-10-27 00:40:43,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:40:43,104 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:40:43,151 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:43,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:43,153 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:40:43,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-10-27 00:40:43,534 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:40:43,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-27 00:40:43,534 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:43,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:43,536 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:40:43,538 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:40:43,538 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:40:43,541 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:40:43,543 [ scc.git] DEBUG Already up to date. 2025-10-27 00:40:43,543 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:40:43,543 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:43,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:43,545 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:40:43,581 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:43,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:43,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:43,617 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:40:43,620 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edf97e90> has no local changes 2025-10-27 00:40:43,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:40:43,625 [ scc.git] DEBUG [detached HEAD 0a8d4a2] merge master -Dorg -Ssuccess-only 2025-10-27 00:40:43,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:43,625 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:40:44,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-10-27 00:40:44,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-10-27 00:40:44,527 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:40:45,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-10-27 00:40:45,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:46,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:40:46,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-10-27 00:40:47,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:47,163 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:40:47,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-10-27 00:40:48,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-10-27 00:40:48,160 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:40:48,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-27 00:40:48,160 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:48,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:48,162 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:40:48,164 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:40:48,164 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:40:48,167 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:40:48,169 [ scc.git] DEBUG Already up to date. 2025-10-27 00:40:48,169 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-10-27 00:40:48,458 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-10-27 00:40:48,458 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-10-27 00:40:48,462 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:40:48,462 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:48,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:48,465 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-10-27 00:40:48,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:48,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-10-27 00:40:48,475 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:40:48,478 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:40:48,478 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:40:48,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:40:48,623 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:40:48,658 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:40:48,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:40:48,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:40:48,695 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:40:48,698 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edfa20d0> has no local changes 2025-10-27 00:40:48,698 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:40:48,703 [ scc.git] DEBUG [detached HEAD 466d303] merge master -Dorg -Ssuccess-only 2025-10-27 00:40:48,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:40:48,703 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:40:49,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-10-27 00:40:49,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-10-27 00:40:49,678 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:40:50,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-10-27 00:40:50,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:51,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:40:51,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-10-27 00:40:52,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:52,122 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:40:52,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-10-27 00:40:53,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-10-27 00:40:53,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:54,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-10-27 00:40:54,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:54,510 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-10-27 00:40:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-10-27 00:40:55,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-10-27 00:40:55,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-10-27 00:40:56,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:40:56,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:40:57,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-10-27 00:40:57,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:40:57,824 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-10-27 00:40:58,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-10-27 00:40:58,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-10-27 00:40:59,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-10-27 00:40:59,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:00,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:00,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-10-27 00:41:01,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:41:01,238 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-10-27 00:41:01,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-10-27 00:41:02,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-10-27 00:41:02,145 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:41:02,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-27 00:41:02,145 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:02,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:02,148 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:41:02,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:41:02,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:41:02,153 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:41:02,155 [ scc.git] DEBUG Already up to date. 2025-10-27 00:41:02,155 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-10-27 00:41:02,443 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-27 00:41:02,444 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-10-27 00:41:02,448 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-10-27 00:41:02,726 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-27 00:41:02,726 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-10-27 00:41:02,730 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-10-27 00:41:03,008 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-27 00:41:03,008 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-10-27 00:41:03,012 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-10-27 00:41:03,300 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-10-27 00:41:03,301 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-10-27 00:41:03,305 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:41:03,305 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:03,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:03,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-10-27 00:41:03,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:03,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-10-27 00:41:03,319 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:41:03,322 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-10-27 00:41:03,322 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-10-27 00:41:03,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:03,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-10-27 00:41:03,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:03,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-10-27 00:41:03,475 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-10-27 00:41:03,475 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:41:03,478 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-10-27 00:41:03,478 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-10-27 00:41:03,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:03,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-10-27 00:41:03,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:03,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-10-27 00:41:03,879 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-10-27 00:41:03,880 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:41:03,883 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-10-27 00:41:03,883 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-10-27 00:41:04,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:04,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-10-27 00:41:04,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:04,274 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-10-27 00:41:04,282 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:41:04,284 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:41:04,284 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:41:04,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:04,671 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:41:04,708 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:04,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:04,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:41:04,747 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:41:04,750 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85f08dc150> has no local changes 2025-10-27 00:41:04,750 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:41:04,756 [ scc.git] DEBUG [detached HEAD 444b068] merge master -Dorg -Ssuccess-only 2025-10-27 00:41:04,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:41:04,756 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:41:05,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-10-27 00:41:05,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2025-10-27 00:41:06,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2025-10-27 00:41:06,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-27 00:41:07,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:07,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:08,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-27 00:41:08,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:09,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None 2025-10-27 00:41:09,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None 2025-10-27 00:41:09,674 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-10-27 00:41:10,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2025-10-27 00:41:10,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2025-10-27 00:41:11,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-27 00:41:11,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:12,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:12,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-27 00:41:13,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:13,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-10-27 00:41:13,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2025-10-27 00:41:13,914 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2025-10-27 00:41:14,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-10-27 00:41:14,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-10-27 00:41:15,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-27 00:41:15,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:16,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:16,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-27 00:41:17,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:17,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-10-27 00:41:18,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-10-27 00:41:18,170 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-10-27 00:41:18,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-10-27 00:41:19,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-10-27 00:41:19,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-27 00:41:20,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:20,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:21,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-27 00:41:21,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:22,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-10-27 00:41:22,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2025-10-27 00:41:22,422 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2025-10-27 00:41:22,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-10-27 00:41:23,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-10-27 00:41:23,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None 2025-10-27 00:41:24,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:24,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:25,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None 2025-10-27 00:41:25,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/1021eca1905ab387f732147d78b87429d3897113?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:26,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None 2025-10-27 00:41:26,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/status HTTP/1.1" 200 None 2025-10-27 00:41:26,841 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2025-10-27 00:41:27,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-10-27 00:41:27,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-10-27 00:41:28,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-10-27 00:41:28,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-10-27 00:41:29,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-10-27 00:41:29,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-10-27 00:41:30,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-10-27 00:41:30,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-10-27 00:41:31,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-10-27 00:41:31,508 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:41:31,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-27 00:41:31,509 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:31,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:31,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:41:31,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:41:31,514 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:41:31,517 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:41:31,529 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-10-27 00:41:32,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-10-27 00:41:32,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-10-27 00:41:33,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-10-27 00:41:34,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-10-27 00:41:34,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-10-27 00:41:35,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-10-27 00:41:36,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-10-27 00:41:36,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-10-27 00:41:36,943 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head' 2025-10-27 00:41:37,241 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-27 00:41:37,241 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD 2025-10-27 00:41:37,245 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2025-10-27 00:41:37,523 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-27 00:41:37,524 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2025-10-27 00:41:37,527 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-10-27 00:41:37,809 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-27 00:41:37,809 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-10-27 00:41:37,813 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2025-10-27 00:41:38,097 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-27 00:41:38,097 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2025-10-27 00:41:38,102 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2025-10-27 00:41:38,383 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-10-27 00:41:38,383 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2025-10-27 00:41:38,387 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:41:38,387 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:38,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:38,389 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1021eca1905ab387f732147d78b87429d3897113' 2025-10-27 00:41:38,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:38,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 1021eca1905ab387f732147d78b87429d3897113' 2025-10-27 00:41:38,403 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:41:38,407 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +- 2025-10-27 00:41:38,407 [ scc.git] DEBUG .isort.cfg | 2 +- 2025-10-27 00:41:38,407 [ scc.git] DEBUG README.rst | 5 +- 2025-10-27 00:41:38,407 [ scc.git] DEBUG setup.py | 5 +- 2025-10-27 00:41:38,407 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 -- 2025-10-27 00:41:38,407 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++- 2025-10-27 00:41:38,407 [ scc.git] DEBUG src/omero_zarr/masks.py | 21 ++++--- 2025-10-27 00:41:38,407 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 92 ++++++++++++++++++--------- 2025-10-27 00:41:38,407 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++-- 2025-10-27 00:41:38,408 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++---------- 2025-10-27 00:41:38,408 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++----- 2025-10-27 00:41:38,408 [ scc.git] DEBUG 11 files changed, 224 insertions(+), 108 deletions(-) 2025-10-27 00:41:38,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:38,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-27 00:41:38,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:38,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-27 00:41:38,603 [ scc.git] DEBUG Auto-merging README.rst 2025-10-27 00:41:38,603 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-10-27 00:41:38,603 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:41:38,604 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:41:38,606 [ scc.git] DEBUG Calling 'git reset --hard c7830a4d3c9a63862493f099ae3d062c879a66cd' 2025-10-27 00:41:38,610 [ scc.git] DEBUG HEAD is now at c7830a4 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-27 00:41:38,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:38,973 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-10-27 00:41:38,977 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-27 00:41:38,979 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - test/integration/clitest/test_export.py - src/omero_zarr/cli.py - src/omero_zarr/masks.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/util.py --conflicts 2025-10-27 00:41:38,981 [ scc.config] DEBUG Found github.token 2025-10-27 00:41:38,981 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2025-10-27 00:41:38,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-27 00:41:38,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:38,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-27 00:41:38,996 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-10-27 00:41:38,996 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-10-27 00:41:38,996 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-10-27 00:41:38,997 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-10-27 00:41:38,997 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-10-27 00:41:38,997 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:41:38,997 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:41:38,999 [ scc.git] DEBUG Calling 'git reset --hard c7830a4d3c9a63862493f099ae3d062c879a66cd' 2025-10-27 00:41:39,004 [ scc.git] DEBUG HEAD is now at c7830a4 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-27 00:41:39,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:39,374 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-10-27 00:41:39,377 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-27 00:41:39,380 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - test/integration/clitest/test_export.py - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2025-10-27 00:41:39,382 [ scc.config] DEBUG Found github.token 2025-10-27 00:41:39,382 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2025-10-27 00:41:39,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-27 00:41:39,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:39,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-27 00:41:39,396 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-10-27 00:41:39,397 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-10-27 00:41:39,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2025-10-27 00:41:39,397 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:41:39,397 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:41:39,400 [ scc.git] DEBUG Calling 'git reset --hard c7830a4d3c9a63862493f099ae3d062c879a66cd' 2025-10-27 00:41:39,404 [ scc.git] DEBUG HEAD is now at c7830a4 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-27 00:41:39,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:39,788 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-10-27 00:41:39,790 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-27 00:41:39,793 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py --conflicts 2025-10-27 00:41:39,795 [ scc.config] DEBUG Found github.token 2025-10-27 00:41:39,795 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts. 2025-10-27 00:41:39,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-27 00:41:39,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:39,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-27 00:41:39,808 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-10-27 00:41:39,809 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2025-10-27 00:41:39,809 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:41:39,809 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:41:39,811 [ scc.git] DEBUG Calling 'git reset --hard c7830a4d3c9a63862493f099ae3d062c879a66cd' 2025-10-27 00:41:39,816 [ scc.git] DEBUG HEAD is now at c7830a4 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2025-10-27 00:41:40,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:41:40,179 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b 4628738fdf646d79d13c2f8a29b391de58ba2b29' 2025-10-27 00:41:40,182 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-10-27 00:41:40,185 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/zarr_import.py --conflicts 2025-10-27 00:41:40,186 [ scc.config] DEBUG Found github.token 2025-10-27 00:41:40,187 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2025-10-27 00:41:40,187 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:41:40,224 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:40,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:40,226 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:41:40,261 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:41:40,265 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edfb7a50> has no local changes 2025-10-27 00:41:40,265 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:41:40,271 [ scc.git] DEBUG [detached HEAD df8a17a] merge master -Dorg -Ssuccess-only 2025-10-27 00:41:40,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:41:40,271 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:41:40,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-10-27 00:41:41,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/644 HTTP/1.1" 200 None 2025-10-27 00:41:41,217 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:41:41,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82 HTTP/1.1" 200 None 2025-10-27 00:41:42,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:42,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:43,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82 HTTP/1.1" 200 None 2025-10-27 00:41:43,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/27227c3f5140c6562210f05588b43e8923856d82?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:41:43,853 [ scc.repo] DEBUG - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2025-10-27 00:41:44,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None 2025-10-27 00:41:44,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None 2025-10-27 00:41:44,781 [ scc.repo] DEBUG # ... Include label: include 2025-10-27 00:41:45,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None 2025-10-27 00:41:45,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None 2025-10-27 00:41:46,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/deca0590336231198ee955604cc63b333149f7a9?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:41:46,870 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling' 2025-10-27 00:41:47,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-10-27 00:41:47,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-10-27 00:41:48,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-10-27 00:41:48,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-10-27 00:41:48,898 [ scc.repo] DEBUG # ... Include label: include 2025-10-27 00:41:49,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None 2025-10-27 00:41:49,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:50,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None 2025-10-27 00:41:50,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/31d53f83f21d60e0a6d262403f47be360df7fd04?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:41:50,727 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-10-27 00:41:51,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-10-27 00:41:51,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None 2025-10-27 00:41:52,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None 2025-10-27 00:41:52,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-10-27 00:41:53,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:53,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:41:54,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None 2025-10-27 00:41:54,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:41:54,592 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst' 2025-10-27 00:41:55,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-10-27 00:41:55,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-10-27 00:41:56,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None 2025-10-27 00:41:56,139 [ scc.repo] DEBUG # ... Include label: include 2025-10-27 00:41:56,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50d0903e8fc9347a5aff6178c70137a05bb468a3 HTTP/1.1" 200 None 2025-10-27 00:41:57,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50d0903e8fc9347a5aff6178c70137a05bb468a3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:41:57,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/50d0903e8fc9347a5aff6178c70137a05bb468a3 HTTP/1.1" 200 None 2025-10-27 00:41:58,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/50d0903e8fc9347a5aff6178c70137a05bb468a3?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:41:58,061 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-10-27 00:41:58,061 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:41:58,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-27 00:41:58,062 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:41:58,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:41:58,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:41:58,067 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:41:58,067 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:41:58,071 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:41:58,094 [ scc.git] DEBUG Updating 9cc36cde..baab5c06 2025-10-27 00:41:58,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2025-10-27 00:41:59,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2025-10-27 00:42:00,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2025-10-27 00:42:00,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-10-27 00:42:01,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-10-27 00:42:02,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-10-27 00:42:02,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-10-27 00:42:03,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-10-27 00:42:04,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-10-27 00:42:04,071 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-10-27 00:42:04,388 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-27 00:42:04,389 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-10-27 00:42:04,393 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head' 2025-10-27 00:42:04,680 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-27 00:42:04,680 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD 2025-10-27 00:42:04,684 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-10-27 00:42:04,967 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-27 00:42:04,967 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-10-27 00:42:04,971 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2025-10-27 00:42:05,261 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-27 00:42:05,261 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2025-10-27 00:42:05,265 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head' 2025-10-27 00:42:05,562 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-10-27 00:42:05,562 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD 2025-10-27 00:42:05,566 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:42:05,566 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:05,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:05,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...50d0903e8fc9347a5aff6178c70137a05bb468a3' 2025-10-27 00:42:05,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:05,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 50d0903e8fc9347a5aff6178c70137a05bb468a3' 2025-10-27 00:42:05,602 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-10-27 00:42:05,602 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-10-27 00:42:05,602 [ scc.git] DEBUG Auto-merging src/index.html 2025-10-27 00:42:05,603 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:05,613 [ scc.git] DEBUG .gitignore | 2 + 2025-10-27 00:42:05,613 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 300 +++++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/index.html | 44 +- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 213 +++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/line.js | 220 +++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/point.js | 208 +++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 212 +++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/rect.js | 217 +++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 ++++++++++- 2025-10-27 00:42:05,613 [ scc.git] DEBUG src/js/shape_editor/text.js | 812 +++++++++++++++++++++ 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/js/views/right_panel_view.js | 122 +++- 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 ++++- 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-10-27 00:42:05,614 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++--- 2025-10-27 00:42:05,614 [ scc.git] DEBUG 22 files changed, 3391 insertions(+), 235 deletions(-) 2025-10-27 00:42:05,614 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-10-27 00:42:05,614 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-10-27 00:42:05,615 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-10-27 00:42:05,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:05,794 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333' 2025-10-27 00:42:05,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:05,803 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333' 2025-10-27 00:42:05,822 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:05,825 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++ 2025-10-27 00:42:05,825 [ scc.git] DEBUG README.rst | 4 +- 2025-10-27 00:42:05,825 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++ 2025-10-27 00:42:05,825 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-) 2025-10-27 00:42:05,825 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md 2025-10-27 00:42:05,825 [ scc.git] DEBUG create mode 100644 docs/contributing.md 2025-10-27 00:42:06,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:06,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-27 00:42:06,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:06,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-27 00:42:06,246 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-10-27 00:42:06,246 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-10-27 00:42:06,246 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-10-27 00:42:06,246 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-10-27 00:42:06,246 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-10-27 00:42:06,246 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:42:06,247 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:42:06,251 [ scc.git] DEBUG Calling 'git reset --hard f079f4a08e64ae8e36e221933dff6131e2d95947' 2025-10-27 00:42:06,258 [ scc.git] DEBUG HEAD is now at f079f4a0 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 2025-10-27 00:42:06,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:06,614 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 31d53f83f21d60e0a6d262403f47be360df7fd04' 2025-10-27 00:42:06,618 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3' 2025-10-27 00:42:06,621 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-10-27 00:42:06,623 [ scc.config] DEBUG Found github.token 2025-10-27 00:42:06,623 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-10-27 00:42:06,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...deca0590336231198ee955604cc63b333149f7a9' 2025-10-27 00:42:06,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:06,632 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) deca0590336231198ee955604cc63b333149f7a9' 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2025-10-27 00:42:06,653 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:42:06,654 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:42:06,658 [ scc.git] DEBUG Calling 'git reset --hard f079f4a08e64ae8e36e221933dff6131e2d95947' 2025-10-27 00:42:06,666 [ scc.git] DEBUG HEAD is now at f079f4a0 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 2025-10-27 00:42:07,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:07,027 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 deca0590336231198ee955604cc63b333149f7a9' 2025-10-27 00:42:07,031 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3' 2025-10-27 00:42:07,035 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/shape_editor/rect.js - src/js/shape_editor/shape_manager.js --conflicts 2025-10-27 00:42:07,036 [ scc.config] DEBUG Found github.token 2025-10-27 00:42:07,037 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts. 2025-10-27 00:42:07,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...27227c3f5140c6562210f05588b43e8923856d82' 2025-10-27 00:42:07,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:07,045 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Bump vite from 6.2.6 to 6.4.1) 27227c3f5140c6562210f05588b43e8923856d82' 2025-10-27 00:42:07,060 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:07,064 [ scc.git] DEBUG package-lock.json | 92 ++++++++++++++++++++++++++++++++++++++++++++++++++++--- 2025-10-27 00:42:07,064 [ scc.git] DEBUG package.json | 2 +- 2025-10-27 00:42:07,064 [ scc.git] DEBUG 2 files changed, 88 insertions(+), 6 deletions(-) 2025-10-27 00:42:07,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:07,427 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:42:07,465 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:07,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:07,467 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:42:07,503 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:42:07,508 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edf27590> has no local changes 2025-10-27 00:42:07,508 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..baab5c06 Previously merged: - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:42:07,516 [ scc.git] DEBUG [detached HEAD bf3d36c8] merge master -Dorg -Ssuccess-only 2025-10-27 00:42:07,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:42:07,516 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:42:07,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-10-27 00:42:08,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-10-27 00:42:08,411 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:08,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-10-27 00:42:09,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:10,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:10,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-10-27 00:42:11,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:11,034 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:42:11,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-10-27 00:42:11,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-10-27 00:42:12,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-10-27 00:42:12,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:13,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-10-27 00:42:13,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:13,894 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-10-27 00:42:13,894 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:42:13,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-27 00:42:13,894 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:13,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:13,897 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:42:13,899 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:42:13,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:42:13,901 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:42:13,904 [ scc.git] DEBUG Already up to date. 2025-10-27 00:42:13,904 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-10-27 00:42:14,189 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-10-27 00:42:14,189 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-10-27 00:42:14,192 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-10-27 00:42:14,506 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-10-27 00:42:14,506 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-10-27 00:42:14,509 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:42:14,510 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:14,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:14,512 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-10-27 00:42:14,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:14,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-10-27 00:42:14,523 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-10-27 00:42:14,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:14,526 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-10-27 00:42:14,526 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-10-27 00:42:14,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:14,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-10-27 00:42:14,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:14,663 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-10-27 00:42:14,670 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:14,673 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:42:14,673 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:42:15,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:15,078 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:42:15,116 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:15,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:15,118 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:42:15,154 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:42:15,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee044150> has no local changes 2025-10-27 00:42:15,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:42:15,162 [ scc.git] DEBUG [detached HEAD a7f83a8] merge master -Dorg -Ssuccess-only 2025-10-27 00:42:15,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:42:15,162 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:42:15,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-10-27 00:42:16,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-10-27 00:42:16,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-10-27 00:42:17,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-10-27 00:42:17,182 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:17,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-10-27 00:42:18,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:18,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:19,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-10-27 00:42:19,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:19,769 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-10-27 00:42:20,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-10-27 00:42:20,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-10-27 00:42:21,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-10-27 00:42:21,269 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:21,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-10-27 00:42:22,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:22,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:23,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-10-27 00:42:23,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:23,813 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-10-27 00:42:24,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-10-27 00:42:24,302 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:24,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-10-27 00:42:25,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:25,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:26,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-10-27 00:42:26,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:26,848 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-10-27 00:42:27,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-10-27 00:42:27,322 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:27,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-10-27 00:42:28,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:28,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:29,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-10-27 00:42:29,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:29,825 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-10-27 00:42:30,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-10-27 00:42:30,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-10-27 00:42:30,741 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:31,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-10-27 00:42:31,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:32,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:32,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-10-27 00:42:33,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:33,656 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-10-27 00:42:34,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-10-27 00:42:34,132 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:34,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-10-27 00:42:35,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:36,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:36,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-10-27 00:42:37,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:37,171 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-10-27 00:42:37,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-10-27 00:42:37,648 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:38,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-10-27 00:42:38,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:39,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:39,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-10-27 00:42:40,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:40,267 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-10-27 00:42:40,267 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:42:40,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-27 00:42:40,268 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:40,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:40,270 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:42:40,273 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:42:40,273 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:42:40,275 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:42:40,278 [ scc.git] DEBUG Already up to date. 2025-10-27 00:42:40,278 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-10-27 00:42:40,573 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:40,573 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-10-27 00:42:40,576 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-10-27 00:42:40,854 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:40,854 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-10-27 00:42:40,858 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-10-27 00:42:41,140 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:41,140 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-10-27 00:42:41,144 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-10-27 00:42:41,417 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:41,417 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-10-27 00:42:41,421 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-10-27 00:42:41,717 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:41,717 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-10-27 00:42:41,721 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-10-27 00:42:42,022 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:42,022 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-10-27 00:42:42,026 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-10-27 00:42:42,302 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-10-27 00:42:42,302 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-10-27 00:42:42,306 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:42:42,306 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:42,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:42,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-10-27 00:42:42,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:42,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-10-27 00:42:42,321 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:42,326 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-10-27 00:42:42,326 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-10-27 00:42:42,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:42,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-10-27 00:42:42,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:42,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-10-27 00:42:42,499 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:42:42,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:42,504 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-10-27 00:42:42,504 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-10-27 00:42:42,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:42,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-27 00:42:42,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:42,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-27 00:42:42,902 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:42:42,902 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-27 00:42:42,902 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:42:42,903 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:42:42,905 [ scc.git] DEBUG Calling 'git reset --hard f85057806931fc77516751b4a322c72ecb3544fe' 2025-10-27 00:42:42,909 [ scc.git] DEBUG HEAD is now at f850578 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-10-27 00:42:43,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:43,284 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-10-27 00:42:43,287 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-27 00:42:43,289 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-10-27 00:42:43,291 [ scc.config] DEBUG Found github.token 2025-10-27 00:42:43,291 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-10-27 00:42:43,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-10-27 00:42:43,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:43,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-10-27 00:42:43,310 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:42:43,311 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:43,315 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-10-27 00:42:43,315 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-10-27 00:42:43,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:43,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-10-27 00:42:43,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:43,682 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-10-27 00:42:43,697 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:42:43,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:42:43,703 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-10-27 00:42:43,703 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-10-27 00:42:44,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:44,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-27 00:42:44,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:44,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-27 00:42:44,096 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:42:44,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-27 00:42:44,097 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:42:44,097 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:42:44,099 [ scc.git] DEBUG Calling 'git reset --hard e4fe6145901b46922e6f48873db7bc0dd85d813d' 2025-10-27 00:42:44,104 [ scc.git] DEBUG HEAD is now at e4fe614 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-10-27 00:42:44,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:44,478 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-10-27 00:42:44,481 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-27 00:42:44,483 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-10-27 00:42:44,485 [ scc.config] DEBUG Found github.token 2025-10-27 00:42:44,485 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-10-27 00:42:44,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-27 00:42:44,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:44,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-27 00:42:44,508 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:42:44,508 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-27 00:42:44,508 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:42:44,508 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:42:44,511 [ scc.git] DEBUG Calling 'git reset --hard e4fe6145901b46922e6f48873db7bc0dd85d813d' 2025-10-27 00:42:44,515 [ scc.git] DEBUG HEAD is now at e4fe614 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-10-27 00:42:44,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:42:44,864 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-10-27 00:42:44,866 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-10-27 00:42:44,869 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-10-27 00:42:44,871 [ scc.config] DEBUG Found github.token 2025-10-27 00:42:44,871 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-10-27 00:42:44,871 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:42:44,906 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:42:44,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:42:44,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:42:44,942 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:42:44,945 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee0ef3d0> has no local changes 2025-10-27 00:42:44,946 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:42:44,952 [ scc.git] DEBUG [detached HEAD 323eb95] merge master -Dorg -Ssuccess-only 2025-10-27 00:42:44,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:42:44,952 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:42:45,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-10-27 00:42:45,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2025-10-27 00:42:46,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-10-27 00:42:46,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-10-27 00:42:47,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-10-27 00:42:47,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-10-27 00:42:47,814 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:48,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-10-27 00:42:48,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:49,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:49,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-10-27 00:42:50,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:50,262 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-10-27 00:42:50,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-10-27 00:42:50,715 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:42:51,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-10-27 00:42:51,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:52,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:42:52,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-10-27 00:42:53,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:53,206 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-10-27 00:42:53,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-10-27 00:42:54,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-10-27 00:42:54,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-10-27 00:42:55,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-10-27 00:42:55,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-10-27 00:42:56,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:56,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-10-27 00:42:57,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:57,044 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-10-27 00:42:57,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-10-27 00:42:58,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-10-27 00:42:58,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-10-27 00:42:58,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:42:59,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-10-27 00:42:59,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:42:59,858 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-10-27 00:43:00,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-10-27 00:43:00,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-10-27 00:43:01,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-10-27 00:43:01,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:02,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-10-27 00:43:02,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:02,645 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-10-27 00:43:03,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-10-27 00:43:03,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-10-27 00:43:04,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-10-27 00:43:04,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:05,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:05,061 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:43:05,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-27 00:43:05,061 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:05,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:05,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:43:05,066 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:43:05,066 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:43:05,068 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:43:05,075 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-10-27 00:43:05,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-10-27 00:43:05,743 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-10-27 00:43:06,057 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-27 00:43:06,057 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-10-27 00:43:06,061 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-10-27 00:43:06,337 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-27 00:43:06,337 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-10-27 00:43:06,342 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-10-27 00:43:06,633 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-27 00:43:06,633 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-10-27 00:43:06,637 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-10-27 00:43:06,919 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-27 00:43:06,919 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-10-27 00:43:06,923 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-10-27 00:43:07,199 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-10-27 00:43:07,199 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-10-27 00:43:07,204 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:43:07,204 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:07,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:07,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-10-27 00:43:07,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:07,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-10-27 00:43:07,224 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-10-27 00:43:07,224 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-10-27 00:43:07,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:07,227 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-10-27 00:43:07,227 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-10-27 00:43:07,227 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-10-27 00:43:07,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:07,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-10-27 00:43:07,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:07,525 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-10-27 00:43:07,541 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-10-27 00:43:07,542 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-10-27 00:43:07,542 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-10-27 00:43:07,542 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-10-27 00:43:07,542 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:07,546 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-10-27 00:43:07,546 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-10-27 00:43:07,546 [ scc.git] DEBUG src/app/header.html | 5 + 2025-10-27 00:43:07,546 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-10-27 00:43:07,546 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-10-27 00:43:07,546 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-10-27 00:43:07,546 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-10-27 00:43:07,546 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-10-27 00:43:07,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:07,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-10-27 00:43:07,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:07,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-10-27 00:43:07,937 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-10-27 00:43:07,938 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:07,940 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-10-27 00:43:07,940 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-10-27 00:43:07,940 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-10-27 00:43:08,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:08,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-10-27 00:43:08,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:08,316 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-10-27 00:43:08,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:08,339 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-10-27 00:43:08,339 [ scc.git] DEBUG package.json | 2 +- 2025-10-27 00:43:08,339 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-10-27 00:43:08,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:08,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-27 00:43:08,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:08,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-27 00:43:08,745 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:43:08,745 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-10-27 00:43:08,745 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:43:08,746 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:43:08,748 [ scc.git] DEBUG Calling 'git reset --hard d6478d065449068d612d78cea679322ceede74fe' 2025-10-27 00:43:08,755 [ scc.git] DEBUG HEAD is now at d6478d0 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-10-27 00:43:09,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:09,093 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-10-27 00:43:09,095 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-10-27 00:43:09,098 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-10-27 00:43:09,100 [ scc.config] DEBUG Found github.token 2025-10-27 00:43:09,100 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-10-27 00:43:09,100 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:43:09,135 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:09,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:09,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:43:09,171 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:43:09,177 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edfee550> has no local changes 2025-10-27 00:43:09,177 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:43:09,183 [ scc.git] DEBUG [detached HEAD 9489b83] merge master -Dorg -Ssuccess-only 2025-10-27 00:43:09,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:43:09,183 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:43:09,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-10-27 00:43:10,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-10-27 00:43:10,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-10-27 00:43:10,556 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:43:11,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-10-27 00:43:11,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:12,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:12,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-10-27 00:43:12,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:12,972 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:43:13,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-10-27 00:43:13,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-10-27 00:43:14,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:14,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-10-27 00:43:15,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:15,319 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:43:15,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-10-27 00:43:16,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-10-27 00:43:16,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-10-27 00:43:17,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:17,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-10-27 00:43:18,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:18,184 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-10-27 00:43:18,185 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:43:18,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-27 00:43:18,185 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:18,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:18,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:43:18,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:43:18,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:43:18,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:43:18,195 [ scc.git] DEBUG Already up to date. 2025-10-27 00:43:18,195 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-10-27 00:43:18,479 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-27 00:43:18,479 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-10-27 00:43:18,483 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-10-27 00:43:18,762 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-27 00:43:18,763 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-10-27 00:43:18,766 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-10-27 00:43:19,052 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-10-27 00:43:19,052 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-10-27 00:43:19,056 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:43:19,056 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:19,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:19,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-10-27 00:43:19,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:19,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-10-27 00:43:19,071 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:19,074 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-10-27 00:43:19,074 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-10-27 00:43:19,074 [ scc.git] DEBUG requirements.txt | 2 +- 2025-10-27 00:43:19,074 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-10-27 00:43:19,074 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-10-27 00:43:19,074 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-10-27 00:43:19,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:19,215 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-10-27 00:43:19,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:19,220 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-10-27 00:43:19,227 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:19,230 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:43:19,230 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:43:19,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:19,608 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-27 00:43:19,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:19,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-27 00:43:19,620 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-10-27 00:43:19,620 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-10-27 00:43:19,620 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:43:19,620 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:43:19,623 [ scc.git] DEBUG Calling 'git reset --hard 5f07f032e3ce8783e3bf350abd987391f0acc4b0' 2025-10-27 00:43:19,626 [ scc.git] DEBUG HEAD is now at 5f07f03 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-10-27 00:43:20,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:20,035 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-10-27 00:43:20,038 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-10-27 00:43:20,040 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-10-27 00:43:20,042 [ scc.config] DEBUG Found github.token 2025-10-27 00:43:20,042 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-10-27 00:43:20,042 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:43:20,079 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:20,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:20,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:43:20,115 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:43:20,118 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee0445d0> has no local changes 2025-10-27 00:43:20,118 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:43:20,123 [ scc.git] DEBUG [detached HEAD f4e848f] merge master -Dorg -Ssuccess-only 2025-10-27 00:43:20,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:43:20,124 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:43:20,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-10-27 00:43:21,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-10-27 00:43:21,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-10-27 00:43:22,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-10-27 00:43:22,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:23,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-10-27 00:43:23,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:23,443 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-10-27 00:43:23,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-10-27 00:43:24,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-10-27 00:43:25,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-10-27 00:43:25,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:26,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-10-27 00:43:26,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:26,629 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-10-27 00:43:26,629 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:43:26,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-27 00:43:26,629 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:26,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:26,632 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:43:26,634 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:43:26,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:43:26,636 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:43:26,643 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-10-27 00:43:27,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-10-27 00:43:27,255 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-10-27 00:43:27,565 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-10-27 00:43:27,565 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-10-27 00:43:27,569 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-10-27 00:43:27,852 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-10-27 00:43:27,852 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-10-27 00:43:27,855 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:43:27,855 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:27,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:27,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-27 00:43:27,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:27,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-27 00:43:27,876 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-10-27 00:43:27,876 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-10-27 00:43:27,876 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-10-27 00:43:27,876 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-10-27 00:43:27,876 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:43:27,877 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:43:27,879 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-27 00:43:27,883 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-27 00:43:28,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:28,056 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-10-27 00:43:28,060 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-27 00:43:28,062 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2025-10-27 00:43:28,064 [ scc.config] DEBUG Found github.token 2025-10-27 00:43:28,064 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-10-27 00:43:28,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-27 00:43:28,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:28,070 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-27 00:43:28,083 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-10-27 00:43:28,083 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-10-27 00:43:28,083 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-10-27 00:43:28,083 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:43:28,084 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:43:28,086 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-27 00:43:28,090 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-10-27 00:43:28,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:28,450 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-10-27 00:43:28,453 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-10-27 00:43:28,456 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-10-27 00:43:28,458 [ scc.config] DEBUG Found github.token 2025-10-27 00:43:28,458 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-10-27 00:43:28,458 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:43:28,495 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:28,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:28,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:43:28,533 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:43:28,537 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edfe2710> has no local changes 2025-10-27 00:43:28,537 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:43:28,543 [ scc.git] DEBUG [detached HEAD 6d3e7fe] merge master -Dorg -Ssuccess-only 2025-10-27 00:43:28,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:43:28,544 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:43:28,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-10-27 00:43:29,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-10-27 00:43:30,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-10-27 00:43:30,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:31,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:31,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-10-27 00:43:31,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:31,983 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:43:32,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-10-27 00:43:32,448 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:43:33,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-10-27 00:43:33,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:34,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:34,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-10-27 00:43:35,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:35,045 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-10-27 00:43:35,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-10-27 00:43:35,499 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:43:36,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-10-27 00:43:36,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:37,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:38,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-10-27 00:43:38,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:38,426 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-10-27 00:43:38,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-10-27 00:43:39,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-10-27 00:43:39,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-10-27 00:43:40,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-10-27 00:43:40,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-10-27 00:43:41,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-10-27 00:43:41,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-10-27 00:43:41,708 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:43:41,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-27 00:43:41,708 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:41,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:41,711 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:43:41,713 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:43:41,713 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:43:41,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:43:41,718 [ scc.git] DEBUG Already up to date. 2025-10-27 00:43:41,718 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-10-27 00:43:41,999 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-27 00:43:41,999 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-10-27 00:43:42,003 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-10-27 00:43:42,287 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-27 00:43:42,287 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-10-27 00:43:42,291 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-10-27 00:43:42,571 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-10-27 00:43:42,571 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-10-27 00:43:42,575 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:43:42,575 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:42,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:42,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-10-27 00:43:42,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:42,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-10-27 00:43:42,589 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:42,592 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-10-27 00:43:42,592 [ scc.git] DEBUG package.json | 2 +- 2025-10-27 00:43:42,592 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-10-27 00:43:42,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:42,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-10-27 00:43:42,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:42,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-10-27 00:43:42,824 [ scc.git] DEBUG Auto-merging package-lock.json 2025-10-27 00:43:42,824 [ scc.git] DEBUG Auto-merging package.json 2025-10-27 00:43:42,825 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:42,828 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-10-27 00:43:42,828 [ scc.git] DEBUG package.json | 2 +- 2025-10-27 00:43:42,828 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-10-27 00:43:43,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:43,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-10-27 00:43:43,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:43,221 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-10-27 00:43:43,228 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:43,230 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:43:43,230 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:43:43,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:43,599 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:43:43,635 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:43,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:43,637 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:43:43,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:43:43,675 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec6156d0> has no local changes 2025-10-27 00:43:43,675 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:43:43,680 [ scc.git] DEBUG [detached HEAD b3a5002] merge master -Dorg -Ssuccess-only 2025-10-27 00:43:43,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:43:43,680 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:43:44,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-10-27 00:43:44,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-10-27 00:43:44,546 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:43:45,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-10-27 00:43:45,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:46,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:46,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-10-27 00:43:47,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:43:47,102 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:43:47,102 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:43:47,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-27 00:43:47,102 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:47,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:47,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:43:47,107 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:43:47,107 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:43:47,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:43:47,112 [ scc.git] DEBUG Already up to date. 2025-10-27 00:43:47,112 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-10-27 00:43:47,412 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-10-27 00:43:47,413 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-10-27 00:43:47,416 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:43:47,416 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:47,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:47,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-10-27 00:43:47,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:47,423 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-10-27 00:43:47,428 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:47,431 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:43:47,431 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:43:47,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:47,576 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:43:47,613 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:47,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:47,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:43:47,649 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:43:47,652 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee046950> has no local changes 2025-10-27 00:43:47,652 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:43:47,657 [ scc.git] DEBUG [detached HEAD f34c8d1] merge master -Dorg -Ssuccess-only 2025-10-27 00:43:47,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:43:47,658 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:43:48,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-10-27 00:43:48,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-10-27 00:43:48,646 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:43:49,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-27 00:43:49,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:50,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:50,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-27 00:43:51,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:51,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-10-27 00:43:52,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-10-27 00:43:52,056 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:43:52,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-10-27 00:43:52,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-10-27 00:43:53,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-27 00:43:53,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:54,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:43:55,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-27 00:43:55,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-10-27 00:43:55,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-10-27 00:43:56,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-10-27 00:43:56,354 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-10-27 00:43:56,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-10-27 00:43:56,821 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:43:56,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-27 00:43:56,821 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:56,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:56,824 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:43:56,826 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:43:56,826 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:43:56,828 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:43:56,831 [ scc.git] DEBUG Already up to date. 2025-10-27 00:43:56,831 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-10-27 00:43:57,124 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-10-27 00:43:57,124 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-10-27 00:43:57,128 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-10-27 00:43:57,411 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-10-27 00:43:57,411 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-10-27 00:43:57,414 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:43:57,414 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:57,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:57,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-10-27 00:43:57,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:57,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-10-27 00:43:57,427 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:57,430 [ scc.git] DEBUG setup.py | 4 +- 2025-10-27 00:43:57,430 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-10-27 00:43:57,430 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-10-27 00:43:57,430 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-10-27 00:43:57,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:57,572 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-10-27 00:43:57,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:57,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-10-27 00:43:57,584 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:43:57,586 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:43:57,586 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:43:57,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:43:57,974 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:43:58,011 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:43:58,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:43:58,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:43:58,047 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:43:58,050 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec6415d0> has no local changes 2025-10-27 00:43:58,050 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:43:58,056 [ scc.git] DEBUG [detached HEAD 5a241b8] merge master -Dorg -Ssuccess-only 2025-10-27 00:43:58,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:43:58,056 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:43:58,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-10-27 00:43:59,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-10-27 00:43:59,094 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:43:59,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-10-27 00:44:00,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:00,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:01,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-10-27 00:44:01,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:01,706 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:44:02,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-10-27 00:44:02,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-10-27 00:44:03,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-10-27 00:44:03,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:04,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-10-27 00:44:04,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:04,585 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-10-27 00:44:04,585 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:04,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-27 00:44:04,585 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:04,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:04,587 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:04,589 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:04,589 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:04,592 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:04,594 [ scc.git] DEBUG Already up to date. 2025-10-27 00:44:04,594 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-10-27 00:44:04,897 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-10-27 00:44:04,897 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-10-27 00:44:04,901 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-10-27 00:44:05,178 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-10-27 00:44:05,178 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-10-27 00:44:05,182 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:05,182 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:05,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:05,184 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-27 00:44:05,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:05,190 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-27 00:44:05,197 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-10-27 00:44:05,197 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-10-27 00:44:05,197 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-10-27 00:44:05,197 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-10-27 00:44:05,197 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-10-27 00:44:05,197 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-10-27 00:44:05,198 [ scc.git] DEBUG Auto-merging setup.py 2025-10-27 00:44:05,198 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-10-27 00:44:05,198 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:44:05,198 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:44:05,200 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-10-27 00:44:05,204 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-10-27 00:44:05,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:05,343 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-10-27 00:44:05,346 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-10-27 00:44:05,349 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - omero_signup/signup_settings.py - setup.py --conflicts 2025-10-27 00:44:05,351 [ scc.config] DEBUG Found github.token 2025-10-27 00:44:05,351 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-10-27 00:44:05,351 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-10-27 00:44:05,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:05,355 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-10-27 00:44:05,361 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:05,364 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:44:05,364 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:44:05,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:05,732 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:05,768 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:05,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:05,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:05,804 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:05,807 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec61a890> has no local changes 2025-10-27 00:44:05,807 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:05,812 [ scc.git] DEBUG [detached HEAD 4292576] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:05,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:05,812 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:06,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-10-27 00:44:06,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-10-27 00:44:07,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-10-27 00:44:07,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:08,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:08,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-10-27 00:44:09,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:09,268 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-10-27 00:44:09,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-10-27 00:44:10,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-10-27 00:44:10,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-10-27 00:44:11,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:11,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:12,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-10-27 00:44:12,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-10-27 00:44:13,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-10-27 00:44:13,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-10-27 00:44:14,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-10-27 00:44:14,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:15,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-10-27 00:44:15,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:15,778 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-10-27 00:44:15,778 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:15,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-27 00:44:15,778 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:15,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:15,781 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:15,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:15,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:15,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:15,788 [ scc.git] DEBUG Already up to date. 2025-10-27 00:44:15,788 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-10-27 00:44:16,084 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-10-27 00:44:16,084 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-10-27 00:44:16,087 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-10-27 00:44:16,377 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-10-27 00:44:16,377 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-10-27 00:44:16,381 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:16,381 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:16,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:16,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-10-27 00:44:16,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:16,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-10-27 00:44:16,399 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:16,402 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-10-27 00:44:16,402 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-10-27 00:44:16,402 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-10-27 00:44:16,402 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-10-27 00:44:16,402 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-10-27 00:44:16,402 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-10-27 00:44:16,403 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-10-27 00:44:16,403 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-10-27 00:44:16,403 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-10-27 00:44:16,403 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-10-27 00:44:16,403 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-10-27 00:44:16,403 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-10-27 00:44:16,403 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-10-27 00:44:16,404 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-10-27 00:44:16,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:16,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-10-27 00:44:16,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:16,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-10-27 00:44:16,549 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:16,551 [ scc.git] DEBUG docker | 1 + 2025-10-27 00:44:16,551 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-10-27 00:44:16,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:16,923 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:16,959 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:16,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:16,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:16,997 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:17,000 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee0465d0> has no local changes 2025-10-27 00:44:17,000 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:17,007 [ scc.git] DEBUG [detached HEAD 29f346d] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:17,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:17,007 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:17,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-10-27 00:44:17,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-10-27 00:44:17,940 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:44:18,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-10-27 00:44:19,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:19,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:20,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-10-27 00:44:20,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:20,866 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:44:20,866 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:20,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-27 00:44:20,866 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:20,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:20,869 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:20,871 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:20,871 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:20,873 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:20,876 [ scc.git] DEBUG Already up to date. 2025-10-27 00:44:20,876 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-10-27 00:44:21,163 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-10-27 00:44:21,163 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-10-27 00:44:21,167 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:21,167 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:21,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:21,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-10-27 00:44:21,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:21,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-10-27 00:44:21,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:21,182 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:44:21,182 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:44:21,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:21,329 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:21,365 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:21,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:21,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:21,401 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:21,403 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edff4e10> has no local changes 2025-10-27 00:44:21,404 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:21,409 [ scc.git] DEBUG [detached HEAD 87119e2] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:21,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:21,409 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:21,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-10-27 00:44:22,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-10-27 00:44:22,291 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:44:22,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-10-27 00:44:23,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:24,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:24,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-10-27 00:44:24,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:24,972 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:44:24,972 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:24,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-27 00:44:24,972 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:24,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:24,975 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:24,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:24,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:24,979 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:24,986 [ scc.git] DEBUG Updating deab817..160d894 2025-10-27 00:44:25,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-10-27 00:44:25,612 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-10-27 00:44:25,913 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-10-27 00:44:25,913 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-10-27 00:44:25,917 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:25,917 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:25,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:25,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-10-27 00:44:25,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:25,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-10-27 00:44:25,930 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:25,933 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:44:25,933 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:44:26,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:26,080 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:26,115 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:26,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:26,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:26,151 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:26,154 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85edfede50> has no local changes 2025-10-27 00:44:26,154 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:26,159 [ scc.git] DEBUG [detached HEAD ee7bb00] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:26,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:26,159 [ scc.git] INFO Overriding base-branch from master to main 2025-10-27 00:44:26,159 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:26,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-10-27 00:44:27,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-10-27 00:44:27,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-10-27 00:44:28,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-10-27 00:44:28,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:29,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:29,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-10-27 00:44:30,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:30,383 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-10-27 00:44:30,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-10-27 00:44:31,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-10-27 00:44:31,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-10-27 00:44:32,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-10-27 00:44:32,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:33,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-10-27 00:44:33,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:33,694 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-10-27 00:44:33,694 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:33,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-27 00:44:33,694 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:33,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:33,697 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-10-27 00:44:33,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:33,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-10-27 00:44:33,702 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-10-27 00:44:33,708 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-10-27 00:44:34,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-10-27 00:44:34,331 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-10-27 00:44:34,614 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-10-27 00:44:34,614 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-10-27 00:44:34,618 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-10-27 00:44:34,909 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-10-27 00:44:34,909 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-10-27 00:44:34,913 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:34,913 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:34,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:34,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-27 00:44:34,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:34,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-27 00:44:34,927 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-10-27 00:44:34,927 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-10-27 00:44:34,927 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-10-27 00:44:34,927 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:44:34,927 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:44:34,929 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-10-27 00:44:34,933 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-10-27 00:44:35,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:35,087 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-10-27 00:44:35,090 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-10-27 00:44:35,092 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-10-27 00:44:35,094 [ scc.config] DEBUG Found github.token 2025-10-27 00:44:35,094 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-10-27 00:44:35,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-10-27 00:44:35,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:35,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-10-27 00:44:35,106 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-10-27 00:44:35,107 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:35,109 [ scc.git] DEBUG README.rst | 3 + 2025-10-27 00:44:35,109 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-10-27 00:44:35,110 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-10-27 00:44:35,110 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-10-27 00:44:35,110 [ scc.git] DEBUG setup.py | 5 +- 2025-10-27 00:44:35,110 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-10-27 00:44:35,110 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-10-27 00:44:35,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:35,478 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:35,514 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:35,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:35,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:35,550 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:35,553 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee046790> has no local changes 2025-10-27 00:44:35,553 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:35,559 [ scc.git] DEBUG [detached HEAD 20fe2de] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:35,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:35,560 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:35,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-10-27 00:44:36,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-10-27 00:44:36,417 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:44:36,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-10-27 00:44:37,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:37,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:38,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-10-27 00:44:38,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:38,942 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:44:38,942 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:38,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-27 00:44:38,942 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:38,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:38,944 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:38,946 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:38,946 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:38,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:38,952 [ scc.git] DEBUG Already up to date. 2025-10-27 00:44:38,952 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-10-27 00:44:39,249 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-10-27 00:44:39,249 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-10-27 00:44:39,252 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:39,252 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:39,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:39,254 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-10-27 00:44:39,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:39,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-10-27 00:44:39,265 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:39,268 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:44:39,268 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:44:39,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:39,408 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:39,443 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:39,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:39,445 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:39,480 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:39,483 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec6bd9d0> has no local changes 2025-10-27 00:44:39,483 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:39,489 [ scc.git] DEBUG [detached HEAD aeeb999] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:39,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:39,489 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:39,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-10-27 00:44:40,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-10-27 00:44:40,367 [ scc.repo] DEBUG # ... Include label: dependencies 2025-10-27 00:44:40,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-10-27 00:44:41,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:41,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:42,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-10-27 00:44:42,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:42,917 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:44:42,917 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:42,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-27 00:44:42,917 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:42,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:42,919 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:42,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:42,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:42,924 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:42,927 [ scc.git] DEBUG Already up to date. 2025-10-27 00:44:42,927 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-10-27 00:44:43,217 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-10-27 00:44:43,217 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-10-27 00:44:43,221 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:43,221 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:43,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:43,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-10-27 00:44:43,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:43,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-10-27 00:44:43,234 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:43,237 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-10-27 00:44:43,237 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-10-27 00:44:43,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:43,389 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:43,424 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:43,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:43,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:43,462 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:43,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec662550> has no local changes 2025-10-27 00:44:43,465 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:43,471 [ scc.git] DEBUG [detached HEAD 2f90752] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:43,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:43,471 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:43,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-10-27 00:44:44,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-10-27 00:44:44,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-10-27 00:44:45,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-10-27 00:44:45,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:46,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-10-27 00:44:46,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:46,738 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-10-27 00:44:46,738 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:46,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-27 00:44:46,738 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:46,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:46,740 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-10-27 00:44:46,743 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:46,743 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-10-27 00:44:46,745 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-10-27 00:44:46,748 [ scc.git] DEBUG Already up to date. 2025-10-27 00:44:46,748 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-10-27 00:44:47,036 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-10-27 00:44:47,036 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-10-27 00:44:47,040 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:47,040 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:47,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:47,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-27 00:44:47,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:47,047 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-27 00:44:47,054 [ scc.git] DEBUG Auto-merging Dockerfile 2025-10-27 00:44:47,054 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-10-27 00:44:47,054 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:44:47,055 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:44:47,057 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-10-27 00:44:47,061 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-10-27 00:44:47,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:47,227 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-10-27 00:44:47,230 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-10-27 00:44:47,232 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-10-27 00:44:47,234 [ scc.config] DEBUG Found github.token 2025-10-27 00:44:47,234 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-10-27 00:44:47,234 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:47,269 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:47,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:47,271 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:47,305 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:47,309 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec6e6410> has no local changes 2025-10-27 00:44:47,309 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:47,314 [ scc.git] DEBUG [detached HEAD 99bdfa5] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:47,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:47,315 [ scc.git] INFO Overriding base-branch from master to develop 2025-10-27 00:44:47,315 [ scc.repo] DEBUG ## PRs found: 2025-10-27 00:44:47,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-10-27 00:44:48,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-10-27 00:44:48,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-10-27 00:44:49,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-27 00:44:49,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:50,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-10-27 00:44:50,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-10-27 00:44:51,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:51,076 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-27 00:44:51,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-10-27 00:44:52,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-10-27 00:44:52,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-27 00:44:52,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-10-27 00:44:53,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-10-27 00:44:53,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-10-27 00:44:53,941 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-27 00:44:54,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-10-27 00:44:54,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-10-27 00:44:55,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-10-27 00:44:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-10-27 00:44:55,908 [ scc.repo] DEBUG ## Branches found: 2025-10-27 00:44:55,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-27 00:44:55,908 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:55,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:55,910 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-10-27 00:44:55,912 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-10-27 00:44:55,912 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-10-27 00:44:55,915 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-10-27 00:44:55,924 [ scc.git] DEBUG Updating 4b4c755..03b9116 2025-10-27 00:44:56,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-10-27 00:44:57,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-10-27 00:44:57,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-10-27 00:44:57,824 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-10-27 00:44:58,133 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-10-27 00:44:58,133 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-10-27 00:44:58,137 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-10-27 00:44:58,448 [ scc.git] DEBUG From https://github.com/ome/scripts 2025-10-27 00:44:58,448 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-10-27 00:44:58,452 [ scc.git] DEBUG ## Unique users: [] 2025-10-27 00:44:58,452 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:58,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:58,454 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-27 00:44:58,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:58,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-27 00:44:58,470 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-10-27 00:44:58,471 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-10-27 00:44:58,471 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-10-27 00:44:58,473 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-10-27 00:44:58,477 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-10-27 00:44:58,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:58,634 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-10-27 00:44:58,639 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-10-27 00:44:58,643 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#568](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-10-27 00:44:58,645 [ scc.config] DEBUG Found github.token 2025-10-27 00:44:58,645 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-10-27 00:44:58,645 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-27 00:44:58,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:58,651 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-10-27 00:44:58,658 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-10-27 00:44:58,661 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-10-27 00:44:58,661 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-10-27 00:44:59,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:59,026 [ scc.git] DEBUG Calling 'git submodule update' 2025-10-27 00:44:59,061 [ scc.git] DEBUG Get sha1 of %s 2025-10-27 00:44:59,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-10-27 00:44:59,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:59,097 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:44:59,100 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ec6d3590> has no local changes 2025-10-27 00:44:59,100 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:44:59,106 [ scc.git] DEBUG [detached HEAD dae4538] merge master -Dorg -Ssuccess-only 2025-10-27 00:44:59,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:44:59,106 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-10-27 00:44:59,174 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-10-27 00:44:59,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:59,434 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-10-27 00:44:59,436 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-10-27 00:44:59,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:44:59,982 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-10-27 00:44:59,984 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-10-27 00:45:00,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:00,524 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-10-27 00:45:00,526 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-10-27 00:45:00,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:00,910 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-10-27 00:45:01,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:01,317 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-10-27 00:45:01,319 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-10-27 00:45:01,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:01,722 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-10-27 00:45:01,724 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-10-27 00:45:02,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:02,138 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-10-27 00:45:02,140 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-10-27 00:45:02,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:02,524 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-10-27 00:45:02,525 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-10-27 00:45:02,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:02,959 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-10-27 00:45:02,961 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-10-27 00:45:03,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:03,359 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-10-27 00:45:03,360 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-10-27 00:45:03,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:03,751 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-10-27 00:45:03,753 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-10-27 00:45:04,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:04,141 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-10-27 00:45:04,143 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-10-27 00:45:04,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:04,597 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-10-27 00:45:04,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:04,990 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-10-27 00:45:05,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:05,380 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-10-27 00:45:05,382 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-10-27 00:45:05,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:05,778 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-10-27 00:45:06,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:06,161 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-10-27 00:45:06,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:06,562 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-10-27 00:45:06,564 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-10-27 00:45:06,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:06,967 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-10-27 00:45:06,969 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-10-27 00:45:07,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:07,352 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-10-27 00:45:07,354 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-10-27 00:45:07,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:07,763 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-10-27 00:45:07,765 [ scc.config] DEBUG Found submodule.scripts.url 2025-10-27 00:45:08,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-10-27 00:45:08,154 [ scc.config] DEBUG Found submodule.scripts.branch 2025-10-27 00:45:08,155 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-10-27 00:45:08,228 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f85ee017a50> has local changes 2025-10-27 00:45:08,228 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 181 will-moore 'Add labels support for import' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 9cc36cde..baab5c06 Previously merged: - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 4b4c755..03b9116 Previously merged: - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#568 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/568/)' 2025-10-27 00:45:08,237 [ scc.git] DEBUG [detached HEAD be71daf] merge master -Dorg -Ssuccess-only 2025-10-27 00:45:08,237 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-10-27 00:45:08,238 [ scc.merge] INFO Repository: ome/omero-plugins 2025-10-27 00:45:08,238 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-10-27 00:45:08,238 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-10-27 00:45:08,238 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-10-27 00:45:08,238 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-10-27 00:45:08,238 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-10-27 00:45:08,238 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,238 [ scc.merge] INFO 2025-10-27 00:45:08,238 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-10-27 00:45:08,238 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-10-27 00:45:08,238 [ scc.merge] INFO Updating 11d3587..37ea700 2025-10-27 00:45:08,238 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-10-27 00:45:08,238 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Repository: ome/omero-figure 2025-10-27 00:45:08,239 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2025-10-27 00:45:08,239 [ scc.merge] INFO Updating 9cc36cde..baab5c06 2025-10-27 00:45:08,239 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-10-27 00:45:08,239 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-10-27 00:45:08,239 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,239 [ scc.merge] INFO Repository: ome/omero-gallery 2025-10-27 00:45:08,239 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,239 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-10-27 00:45:08,240 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-10-27 00:45:08,240 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-10-27 00:45:08,240 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Repository: ome/omero-mapr 2025-10-27 00:45:08,240 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-10-27 00:45:08,240 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Repository: ome/omero-metadata 2025-10-27 00:45:08,240 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-10-27 00:45:08,240 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:45:08,240 [ scc.merge] INFO 2025-10-27 00:45:08,240 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-10-27 00:45:08,240 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Repository: ome/omero-parade 2025-10-27 00:45:08,241 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-10-27 00:45:08,241 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-10-27 00:45:08,241 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Repository: ome/omero-rois 2025-10-27 00:45:08,241 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-10-27 00:45:08,241 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Repository: ome/omero-signup 2025-10-27 00:45:08,241 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-10-27 00:45:08,241 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-10-27 00:45:08,241 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-10-27 00:45:08,241 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-10-27 00:45:08,241 [ scc.merge] INFO 2025-10-27 00:45:08,241 [ scc.merge] INFO Repository: ome/omero-upload 2025-10-27 00:45:08,241 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-10-27 00:45:08,242 [ scc.merge] INFO Updating deab817..160d894 2025-10-27 00:45:08,242 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-10-27 00:45:08,242 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-10-27 00:45:08,242 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-10-27 00:45:08,242 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-10-27 00:45:08,242 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-10-27 00:45:08,242 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-10-27 00:45:08,242 [ scc.merge] INFO Already up to date. 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,242 [ scc.merge] INFO Repository: ome/scripts 2025-10-27 00:45:08,242 [ scc.merge] INFO Excluded PRs: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-10-27 00:45:08,242 [ scc.merge] INFO Updating 4b4c755..03b9116 2025-10-27 00:45:08,242 [ scc.merge] INFO Previously merged: 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-10-27 00:45:08,242 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-10-27 00:45:08,242 [ scc.merge] INFO 2025-10-27 00:45:08,243 [ scc.merge] INFO Merged PRs: 2025-10-27 00:45:08,243 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-10-27 00:45:08,243 [ scc.merge] INFO 2025-10-27 00:45:08,243 [ scc.merge] INFO Conflicting PRs (not included): 2025-10-27 00:45:08,243 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-10-27 00:45:08,243 [ scc.merge] INFO 2025-10-27 00:45:08,243 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-10-27 00:45:08,243 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-10-27 00:45:08,245 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-10-27 00:45:08,247 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-10-27 00:45:08,249 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-10-27 00:45:08,251 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-10-27 00:45:08,253 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-10-27 00:45:08,255 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-10-27 00:45:08,257 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-10-27 00:45:08,259 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-10-27 00:45:08,261 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-10-27 00:45:08,262 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-10-27 00:45:08,264 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-10-27 00:45:08,266 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-10-27 00:45:08,268 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-10-27 00:45:08,270 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-10-27 00:45:08,272 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-10-27 00:45:08,275 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-10-27 00:45:08,277 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-10-27 00:45:08,279 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-10-27 00:45:08,281 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-10-27 00:45:08,283 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-10-27 00:45:08,285 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-10-27 00:45:08,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-10-27 00:45:08,287 [ scc.git] DEBUG Calling 'git remote' 2025-10-27 00:45:08,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 92d849d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 520a51c] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-10-27 00:45:53,529 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-10-27 00:46:03,158 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-10-27 00:46:06,110 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-27 00:46:10,819 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-10-27 00:46:49,315 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS