Started by upstream project "Trigger" build number 671
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
[Pipeline] pwd
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 592
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.3-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.3
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
Using cached idna-3.11-py3-none-any.whl (71 kB)
Using cached certifi-2025.10.5-py3-none-any.whl (163 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.23-py3-none-any.whl (118 kB)
Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.10.5 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-10-31 00:40:39,788 [ scc.config] DEBUG Found github.token
2025-10-31 00:40:39,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-31 00:40:39,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:40,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:40,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-31 00:40:40,894 [ scc.gh] DEBUG 4242 remaining from 5000 (Reset at 01:10
2025-10-31 00:40:40,894 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:40:40,897 [ scc.git] DEBUG Check current status
2025-10-31 00:40:40,897 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:40:40,899 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-31 00:40:40,899 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:40:40,945 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-31 00:40:40,948 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-31 00:40:40,951 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-31 00:40:40,955 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-31 00:40:40,959 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-10-31 00:40:40,962 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-31 00:40:40,965 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-31 00:40:40,968 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-10-31 00:40:40,971 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-31 00:40:40,974 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-31 00:40:40,977 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-31 00:40:40,980 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-31 00:40:40,983 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-31 00:40:40,986 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-31 00:40:40,989 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-31 00:40:40,991 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-31 00:40:40,994 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-31 00:40:40,996 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-31 00:40:40,999 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-31 00:40:41,002 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-31 00:40:41,005 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-31 00:40:41,008 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-10-31 00:40:41,011 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:40:41,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-10-31 00:40:41,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:40:42,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:40:42,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:40:43,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:40:43,151 [ scc.git] DEBUG Resetting...
2025-10-31 00:40:43,151 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-31 00:40:43,158 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-31 00:40:43,158 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-31 00:40:43,253 [ scc.git] DEBUG Check current status
2025-10-31 00:40:43,253 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:40:43,255 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-10-31 00:40:43,256 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:40:43,299 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-31 00:40:43,302 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-31 00:40:43,305 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-31 00:40:43,308 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-31 00:40:43,313 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-10-31 00:40:43,315 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-31 00:40:43,318 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-31 00:40:43,321 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-10-31 00:40:43,324 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-31 00:40:43,327 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-31 00:40:43,330 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-31 00:40:43,332 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-31 00:40:43,336 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-31 00:40:43,338 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-31 00:40:43,341 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-31 00:40:43,344 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-31 00:40:43,346 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-31 00:40:43,349 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-31 00:40:43,351 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-31 00:40:43,354 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-31 00:40:43,356 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-31 00:40:43,360 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-10-31 00:40:43,361 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-10-31 00:40:43,361 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-10-31 00:40:43,361 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-10-31 00:40:43,361 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-10-31 00:40:43,361 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-10-31 00:40:43,361 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:40:43,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-10-31 00:40:44,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-10-31 00:40:44,170 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:40:44,170 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-31 00:40:44,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-10-31 00:40:44,680 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:40:44,680 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-31 00:40:45,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-10-31 00:40:45,197 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:40:45,197 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-31 00:40:45,197 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:40:45,197 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:40:45,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:40:45,199 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:40:45,201 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:40:45,202 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:40:45,204 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:40:45,207 [ scc.git] DEBUG Already up to date.
2025-10-31 00:40:45,207 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-10-31 00:40:45,487 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-31 00:40:45,487 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-10-31 00:40:45,494 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-10-31 00:40:45,771 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-31 00:40:45,771 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-10-31 00:40:45,777 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-10-31 00:40:46,049 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-31 00:40:46,049 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-10-31 00:40:46,055 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:40:46,055 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:40:46,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:40:46,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-31 00:40:46,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:40:46,062 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-31 00:40:46,074 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:40:46,077 [ scc.git] DEBUG scripts | 2 +-
2025-10-31 00:40:46,077 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:40:46,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:46,244 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-31 00:40:46,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:40:46,249 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-31 00:40:46,261 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:40:46,264 [ scc.git] DEBUG omero-figure | 2 +-
2025-10-31 00:40:46,264 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:40:46,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:46,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-31 00:40:46,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:40:46,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-31 00:40:46,671 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:40:46,673 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-10-31 00:40:46,674 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:40:47,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:47,061 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:40:47,119 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-10-31 00:40:47,144 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-10-31 00:40:47,157 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-10-31 00:40:47,158 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:40:47,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:40:47,160 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:40:47,236 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fb434f350> has no local changes
2025-10-31 00:40:47,237 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:40:47,304 [ scc.git] DEBUG [detached HEAD f27ace8] merge master -Dorg -Snone
2025-10-31 00:40:47,304 [ scc.merge] INFO Repository: ome/omero-plugins
2025-10-31 00:40:47,304 [ scc.merge] INFO Already up to date.
2025-10-31 00:40:47,304 [ scc.merge] INFO
2025-10-31 00:40:47,304 [ scc.merge] INFO Merged PRs:
2025-10-31 00:40:47,304 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-31 00:40:47,304 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-31 00:40:47,305 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-31 00:40:47,305 [ scc.merge] INFO
2025-10-31 00:40:47,305 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-31 00:40:47,305 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b'
Submodule path 'omero-figure': checked out 'baab5c06714c374450f7312b1563a593bde691c3'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-test-infra': checked out '40b2517588040d7ae02091fee16e4223681e8e4f'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15'
Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-10-31 00:40:54,336 [ scc.config] DEBUG Found github.token
2025-10-31 00:40:54,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-10-31 00:40:54,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:54,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:40:55,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-10-31 00:40:55,291 [ scc.gh] DEBUG 4228 remaining from 5000 (Reset at 01:10
2025-10-31 00:40:55,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:40:55,293 [ scc.git] DEBUG Check current status
2025-10-31 00:40:55,293 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:40:55,296 [ scc.git] DEBUG f27ace8 merge master -Dorg -Snone
2025-10-31 00:40:55,296 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:40:55,341 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-31 00:40:55,344 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-31 00:40:55,347 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-31 00:40:55,350 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700)
2025-10-31 00:40:55,357 [ scc.git] DEBUG +baab5c06714c374450f7312b1563a593bde691c3 omero-figure (v7.2.1-106-gbaab5c06)
2025-10-31 00:40:55,360 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-31 00:40:55,363 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-31 00:40:55,367 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-10-31 00:40:55,370 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-31 00:40:55,373 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-10-31 00:40:55,376 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-31 00:40:55,379 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-31 00:40:55,382 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-31 00:40:55,385 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-31 00:40:55,388 [ scc.git] DEBUG +40b2517588040d7ae02091fee16e4223681e8e4f omero-test-infra (v0.6.3-62-g40b2517)
2025-10-31 00:40:55,391 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-31 00:40:55,393 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-10-31 00:40:55,396 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207)
2025-10-31 00:40:55,399 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-31 00:40:55,402 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-31 00:40:55,405 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-31 00:40:55,408 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116)
2025-10-31 00:40:55,411 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:40:55,411 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-10-31 00:40:55,413 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-10-31 00:40:55,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-10-31 00:40:56,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:40:56,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:40:57,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:40:57,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:40:57,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:40:57,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-31 00:40:57,610 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:40:57,612 [ scc.git] DEBUG Check current status
2025-10-31 00:40:57,612 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:40:57,615 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-10-31 00:40:57,615 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:40:57,651 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:40:58,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-10-31 00:40:58,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:40:58,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:40:59,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:40:59,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:40:59,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:40:59,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:40:59,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-31 00:40:59,847 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:40:59,849 [ scc.git] DEBUG Check current status
2025-10-31 00:40:59,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:40:59,852 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-10-31 00:40:59,852 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:40:59,890 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:00,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-10-31 00:41:00,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:01,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:01,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:02,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:02,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:02,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:02,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-31 00:41:02,159 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:02,161 [ scc.git] DEBUG Check current status
2025-10-31 00:41:02,161 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:02,163 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-10-31 00:41:02,163 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:02,201 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:02,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-10-31 00:41:03,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:03,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:03,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:04,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:04,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:04,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:04,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-31 00:41:04,397 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:04,399 [ scc.git] DEBUG Check current status
2025-10-31 00:41:04,399 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:04,401 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0
2025-10-31 00:41:04,401 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:04,439 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:04,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-10-31 00:41:05,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:05,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:06,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:06,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:06,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:06,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:06,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-31 00:41:06,607 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:06,609 [ scc.git] DEBUG Check current status
2025-10-31 00:41:06,609 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:06,611 [ scc.git] DEBUG baab5c06 Merge pull request #612 from will-moore/script_version
2025-10-31 00:41:06,612 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:06,650 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:07,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-10-31 00:41:07,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:07,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:08,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:08,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:08,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:08,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:08,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-31 00:41:08,858 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:08,860 [ scc.git] DEBUG Check current status
2025-10-31 00:41:08,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:08,862 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-10-31 00:41:08,862 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:08,900 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:09,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-10-31 00:41:09,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:10,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:10,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:11,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:11,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:11,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:11,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-31 00:41:11,182 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:11,184 [ scc.git] DEBUG Check current status
2025-10-31 00:41:11,184 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:11,186 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-10-31 00:41:11,186 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:11,224 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:11,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-10-31 00:41:12,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:12,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:13,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:13,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:13,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:13,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:13,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-31 00:41:13,482 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:13,484 [ scc.git] DEBUG Check current status
2025-10-31 00:41:13,484 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:13,487 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-10-31 00:41:13,487 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:13,524 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:13,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-10-31 00:41:14,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:14,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:15,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:15,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:15,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:15,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:15,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-31 00:41:15,838 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:15,840 [ scc.git] DEBUG Check current status
2025-10-31 00:41:15,840 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:15,842 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-10-31 00:41:15,842 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:15,880 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:16,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-10-31 00:41:16,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:17,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:17,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:18,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:18,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:18,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:18,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-31 00:41:18,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:18,141 [ scc.git] DEBUG Check current status
2025-10-31 00:41:18,141 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:18,143 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-31 00:41:18,143 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:18,179 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:18,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-10-31 00:41:19,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:19,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:19,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:20,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:20,330 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:20,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:20,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-31 00:41:20,368 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:20,370 [ scc.git] DEBUG Check current status
2025-10-31 00:41:20,370 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:20,372 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-10-31 00:41:20,373 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:20,409 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:20,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-10-31 00:41:21,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:21,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:22,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:22,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:22,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:22,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:22,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-31 00:41:22,638 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:22,640 [ scc.git] DEBUG Check current status
2025-10-31 00:41:22,640 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:22,642 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-10-31 00:41:22,642 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:22,679 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:23,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-10-31 00:41:23,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:23,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:24,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:24,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:24,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:24,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:24,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-31 00:41:24,786 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:24,788 [ scc.git] DEBUG Check current status
2025-10-31 00:41:24,788 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:24,790 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-10-31 00:41:24,790 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:24,827 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:25,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-10-31 00:41:25,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:26,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:26,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:26,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:26,994 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:27,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:27,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-31 00:41:27,032 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:27,034 [ scc.git] DEBUG Check current status
2025-10-31 00:41:27,034 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:27,036 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-10-31 00:41:27,036 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:27,073 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:27,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-10-31 00:41:28,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:28,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:28,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:29,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:29,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:29,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:29,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-31 00:41:29,316 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:29,318 [ scc.git] DEBUG Check current status
2025-10-31 00:41:29,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:29,320 [ scc.git] DEBUG 40b2517 Merge pull request #81 from erickmartins/set-ulimits
2025-10-31 00:41:29,320 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:29,357 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:29,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-31 00:41:29,714 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-31 00:41:29,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-10-31 00:41:30,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:30,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:31,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:31,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:31,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:31,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:31,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-31 00:41:31,752 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:31,754 [ scc.git] DEBUG Check current status
2025-10-31 00:41:31,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:31,756 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-10-31 00:41:31,756 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:31,795 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:32,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-10-31 00:41:32,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:33,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:33,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:34,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:34,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:34,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:34,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-31 00:41:34,166 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:34,168 [ scc.git] DEBUG Check current status
2025-10-31 00:41:34,168 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:34,170 [ scc.git] DEBUG 160d894 Fix display of code
2025-10-31 00:41:34,171 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:34,207 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:34,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-10-31 00:41:35,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:35,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:36,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:36,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:36,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:36,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:36,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-31 00:41:36,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:36,601 [ scc.git] DEBUG Check current status
2025-10-31 00:41:36,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:36,603 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-10-31 00:41:36,604 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:36,641 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:36,642 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-10-31 00:41:37,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-10-31 00:41:37,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:38,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:38,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:38,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:38,870 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:38,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:38,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-31 00:41:38,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:38,911 [ scc.git] DEBUG Check current status
2025-10-31 00:41:38,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:38,913 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-10-31 00:41:38,913 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:38,950 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:39,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-31 00:41:39,281 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-31 00:41:39,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-10-31 00:41:40,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:40,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:40,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:41,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:41,261 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:41,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:41,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-31 00:41:41,299 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:41,300 [ scc.git] DEBUG Check current status
2025-10-31 00:41:41,301 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:41,303 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-10-31 00:41:41,303 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:41,340 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:41,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-31 00:41:41,706 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-31 00:41:41,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-10-31 00:41:42,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:42,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:43,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:43,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:43,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:43,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:43,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-31 00:41:43,750 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:43,752 [ scc.git] DEBUG Check current status
2025-10-31 00:41:43,752 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:43,754 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-10-31 00:41:43,755 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:43,792 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:44,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-10-31 00:41:44,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:45,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:45,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:45,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:45,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:45,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:45,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-31 00:41:45,943 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-10-31 00:41:45,945 [ scc.git] DEBUG Check current status
2025-10-31 00:41:45,945 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:45,948 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-10-31 00:41:45,948 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:45,985 [ scc.config] DEBUG Found remote.origin.url
2025-10-31 00:41:45,985 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-10-31 00:41:46,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-31 00:41:46,323 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-31 00:41:46,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-10-31 00:41:47,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-10-31 00:41:47,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-10-31 00:41:47,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-10-31 00:41:48,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-10-31 00:41:48,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:48,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:48,449 [ scc.git] DEBUG Resetting...
2025-10-31 00:41:48,449 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-10-31 00:41:48,455 [ scc.git] DEBUG HEAD is now at f27ace8 merge master -Dorg -Snone
2025-10-31 00:41:48,455 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-10-31 00:41:48,510 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-10-31 00:41:48,533 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-10-31 00:41:48,553 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-10-31 00:41:48,567 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-10-31 00:41:48,588 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73'
2025-10-31 00:41:48,602 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-10-31 00:41:48,612 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-10-31 00:41:48,634 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-10-31 00:41:48,636 [ scc.git] DEBUG Check current status
2025-10-31 00:41:48,637 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-10-31 00:41:48,639 [ scc.git] DEBUG f27ace8 merge master -Dorg -Snone
2025-10-31 00:41:48,639 [ scc.git] DEBUG Calling 'git submodule status'
2025-10-31 00:41:48,680 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-10-31 00:41:48,682 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-10-31 00:41:48,685 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-10-31 00:41:48,688 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-10-31 00:41:48,693 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-10-31 00:41:48,695 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-10-31 00:41:48,698 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-10-31 00:41:48,701 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-10-31 00:41:48,704 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-10-31 00:41:48,707 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-10-31 00:41:48,710 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-10-31 00:41:48,712 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-10-31 00:41:48,715 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-10-31 00:41:48,718 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-10-31 00:41:48,721 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-10-31 00:41:48,724 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-10-31 00:41:48,726 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-10-31 00:41:48,729 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-10-31 00:41:48,731 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-10-31 00:41:48,734 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-10-31 00:41:48,736 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-10-31 00:41:48,740 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-10-31 00:41:48,740 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-10-31 00:41:48,740 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-10-31 00:41:48,740 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-10-31 00:41:48,741 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-10-31 00:41:48,741 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-10-31 00:41:48,741 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-10-31 00:41:48,741 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:41:49,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-10-31 00:41:49,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-10-31 00:41:49,522 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:41:50,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-10-31 00:41:50,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:41:51,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-10-31 00:41:51,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:41:51,508 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-31 00:41:51,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-10-31 00:41:51,993 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:41:52,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-10-31 00:41:52,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:41:53,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-10-31 00:41:53,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:41:53,810 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-31 00:41:54,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-10-31 00:41:54,288 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:41:54,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-10-31 00:41:55,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:41:55,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-10-31 00:41:56,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:41:56,302 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-31 00:41:56,302 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:41:56,302 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:41:56,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:56,304 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:41:56,306 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:41:56,306 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:41:56,309 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:41:56,311 [ scc.git] DEBUG Already up to date.
2025-10-31 00:41:56,311 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-10-31 00:41:56,611 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-31 00:41:56,611 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-10-31 00:41:56,618 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-10-31 00:41:56,896 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-31 00:41:56,896 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-10-31 00:41:56,902 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-10-31 00:41:57,178 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-10-31 00:41:57,178 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-10-31 00:41:57,184 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:41:57,184 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:41:57,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:57,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-31 00:41:57,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:57,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-10-31 00:41:57,193 [ scc.git] DEBUG Already up to date.
2025-10-31 00:41:57,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:41:57,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-31 00:41:57,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:57,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-10-31 00:41:57,354 [ scc.git] DEBUG Already up to date.
2025-10-31 00:41:57,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:41:57,734 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-31 00:41:57,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:57,738 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-10-31 00:41:57,741 [ scc.git] DEBUG Already up to date.
2025-10-31 00:41:58,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:41:58,132 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:41:58,181 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:41:58,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:58,183 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:41:58,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-10-31 00:41:58,542 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:41:58,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-31 00:41:58,542 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:41:58,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:58,544 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:41:58,546 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:41:58,546 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:41:58,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:41:58,551 [ scc.git] DEBUG Already up to date.
2025-10-31 00:41:58,551 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:41:58,551 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:41:58,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:58,553 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:41:58,591 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:41:58,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:41:58,593 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:41:58,628 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:41:58,630 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a855da550> has no local changes
2025-10-31 00:41:58,630 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:41:58,635 [ scc.git] DEBUG [detached HEAD 6283421] merge master -Dorg -Ssuccess-only
2025-10-31 00:41:58,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:41:58,636 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:41:59,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-10-31 00:41:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2025-10-31 00:41:59,553 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:42:00,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-10-31 00:42:00,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:01,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:01,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-10-31 00:42:02,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:42:02,142 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:42:02,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-10-31 00:42:03,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-10-31 00:42:03,140 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:42:03,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-31 00:42:03,140 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:03,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:03,143 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:42:03,145 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:42:03,145 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:42:03,147 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:42:03,150 [ scc.git] DEBUG Already up to date.
2025-10-31 00:42:03,150 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2025-10-31 00:42:03,431 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2025-10-31 00:42:03,431 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2025-10-31 00:42:03,435 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:42:03,435 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:03,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:03,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-10-31 00:42:03,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:03,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-10-31 00:42:03,448 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:42:03,450 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:42:03,450 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:42:03,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:03,600 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:42:03,637 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:03,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:03,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:42:03,674 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:42:03,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a85aa35d0> has no local changes
2025-10-31 00:42:03,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:42:03,683 [ scc.git] DEBUG [detached HEAD 72d2fb9] merge master -Dorg -Ssuccess-only
2025-10-31 00:42:03,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:42:03,683 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:42:04,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-10-31 00:42:04,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None
2025-10-31 00:42:04,678 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:42:05,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-10-31 00:42:05,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:06,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:06,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-10-31 00:42:07,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:42:07,178 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:42:07,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-10-31 00:42:08,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-10-31 00:42:08,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:09,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-10-31 00:42:09,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:42:09,548 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-10-31 00:42:10,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-10-31 00:42:10,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-10-31 00:42:11,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-10-31 00:42:11,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:12,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:12,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-10-31 00:42:13,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:42:13,068 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-10-31 00:42:13,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-10-31 00:42:14,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-10-31 00:42:14,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-10-31 00:42:15,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:15,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:15,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-10-31 00:42:16,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:42:16,374 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-10-31 00:42:16,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-10-31 00:42:17,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-10-31 00:42:17,312 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:42:17,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-31 00:42:17,312 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:17,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:17,315 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:42:17,317 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:42:17,317 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:42:17,319 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:42:17,322 [ scc.git] DEBUG Already up to date.
2025-10-31 00:42:17,322 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-10-31 00:42:17,604 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-31 00:42:17,604 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-10-31 00:42:17,607 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-10-31 00:42:17,893 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-31 00:42:17,893 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-10-31 00:42:17,897 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-10-31 00:42:18,169 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-31 00:42:18,169 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-10-31 00:42:18,173 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head'
2025-10-31 00:42:18,450 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-10-31 00:42:18,450 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD
2025-10-31 00:42:18,454 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:42:18,454 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:18,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:18,456 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-10-31 00:42:18,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:18,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-10-31 00:42:18,470 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:42:18,472 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-10-31 00:42:18,472 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-10-31 00:42:18,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:18,633 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-10-31 00:42:18,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:18,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-10-31 00:42:18,646 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-10-31 00:42:18,647 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:42:18,650 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-10-31 00:42:18,650 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-10-31 00:42:19,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:19,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-10-31 00:42:19,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:19,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-10-31 00:42:19,050 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-10-31 00:42:19,051 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:42:19,054 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-10-31 00:42:19,054 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-10-31 00:42:19,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:19,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-10-31 00:42:19,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:19,450 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-10-31 00:42:19,457 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:42:19,460 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:42:19,460 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:42:19,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:19,852 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:42:19,889 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:19,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:19,891 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:42:19,927 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:42:19,930 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a87ea4110> has no local changes
2025-10-31 00:42:19,930 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:42:19,936 [ scc.git] DEBUG [detached HEAD c8a7ea0] merge master -Dorg -Ssuccess-only
2025-10-31 00:42:19,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:42:19,936 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:42:20,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-10-31 00:42:20,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2025-10-31 00:42:21,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None
2025-10-31 00:42:21,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-31 00:42:22,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:22,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:23,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-31 00:42:23,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:24,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-10-31 00:42:24,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None
2025-10-31 00:42:24,878 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-10-31 00:42:25,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2025-10-31 00:42:25,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None
2025-10-31 00:42:26,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-31 00:42:26,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:27,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:27,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-31 00:42:28,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:28,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-10-31 00:42:29,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None
2025-10-31 00:42:29,124 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import'
2025-10-31 00:42:29,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-10-31 00:42:30,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2025-10-31 00:42:30,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-31 00:42:31,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:31,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:32,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-31 00:42:32,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:32,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-10-31 00:42:33,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-10-31 00:42:33,319 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-10-31 00:42:33,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-10-31 00:42:34,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-10-31 00:42:34,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-31 00:42:35,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:35,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-31 00:42:36,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:37,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None
2025-10-31 00:42:37,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None
2025-10-31 00:42:37,790 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells'
2025-10-31 00:42:38,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-10-31 00:42:38,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-10-31 00:42:39,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None
2025-10-31 00:42:39,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:40,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:40,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None
2025-10-31 00:42:41,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/1021eca1905ab387f732147d78b87429d3897113?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:41,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113 HTTP/1.1" 200 None
2025-10-31 00:42:42,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/1021eca1905ab387f732147d78b87429d3897113/status HTTP/1.1" 200 None
2025-10-31 00:42:42,125 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2025-10-31 00:42:42,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-10-31 00:42:43,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-10-31 00:42:43,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-10-31 00:42:44,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-10-31 00:42:44,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-10-31 00:42:44,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-10-31 00:42:45,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-10-31 00:42:45,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-10-31 00:42:46,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-10-31 00:42:46,459 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:42:46,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-31 00:42:46,459 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:46,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:46,462 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:42:46,464 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:42:46,464 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:42:46,467 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:42:46,479 [ scc.git] DEBUG Updating 11d3587..37ea700
2025-10-31 00:42:47,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2025-10-31 00:42:47,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-10-31 00:42:48,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-10-31 00:42:49,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-10-31 00:42:49,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-10-31 00:42:50,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-10-31 00:42:51,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-10-31 00:42:51,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-10-31 00:42:51,989 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head'
2025-10-31 00:42:52,271 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-31 00:42:52,271 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD
2025-10-31 00:42:52,276 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head'
2025-10-31 00:42:52,587 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-31 00:42:52,587 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD
2025-10-31 00:42:52,592 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-10-31 00:42:52,880 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-31 00:42:52,881 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-10-31 00:42:52,885 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head'
2025-10-31 00:42:53,165 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-31 00:42:53,165 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD
2025-10-31 00:42:53,169 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2025-10-31 00:42:53,445 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-10-31 00:42:53,445 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2025-10-31 00:42:53,449 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:42:53,450 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:53,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:53,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1021eca1905ab387f732147d78b87429d3897113'
2025-10-31 00:42:53,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:53,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 1021eca1905ab387f732147d78b87429d3897113'
2025-10-31 00:42:53,466 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:42:53,470 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 5 +-
2025-10-31 00:42:53,470 [ scc.git] DEBUG .isort.cfg | 2 +-
2025-10-31 00:42:53,470 [ scc.git] DEBUG README.rst | 5 +-
2025-10-31 00:42:53,470 [ scc.git] DEBUG setup.py | 5 +-
2025-10-31 00:42:53,470 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 --
2025-10-31 00:42:53,470 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++-
2025-10-31 00:42:53,470 [ scc.git] DEBUG src/omero_zarr/masks.py | 21 ++++---
2025-10-31 00:42:53,470 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 92 ++++++++++++++++++---------
2025-10-31 00:42:53,470 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++--
2025-10-31 00:42:53,470 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 59 +++++++----------
2025-10-31 00:42:53,470 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++-----
2025-10-31 00:42:53,471 [ scc.git] DEBUG 11 files changed, 224 insertions(+), 108 deletions(-)
2025-10-31 00:42:53,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:53,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-31 00:42:53,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:53,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-31 00:42:53,642 [ scc.git] DEBUG Auto-merging README.rst
2025-10-31 00:42:53,642 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-10-31 00:42:53,642 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:42:53,643 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:42:53,645 [ scc.git] DEBUG Calling 'git reset --hard ff6bbdc2f31f42c7a508691ae70a3a7ea17aecf1'
2025-10-31 00:42:53,650 [ scc.git] DEBUG HEAD is now at ff6bbdc merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-31 00:42:54,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:54,031 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b e795ce506487fad5c1184c909aaa1dab9a30401c'
2025-10-31 00:42:54,034 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-31 00:42:54,037 [ scc.git] INFO - PR 174 will-moore 'Skip wells'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/util.py
- src/omero_zarr/cli.py
- src/omero_zarr/raw_pixels.py
- src/omero_zarr/masks.py
- test/integration/clitest/test_export.py
--conflicts
2025-10-31 00:42:54,038 [ scc.config] DEBUG Found github.token
2025-10-31 00:42:54,038 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts.
2025-10-31 00:42:54,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-31 00:42:54,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:54,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-31 00:42:54,053 [ scc.git] DEBUG Auto-merging CHANGELOG.md
2025-10-31 00:42:54,053 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md
2025-10-31 00:42:54,053 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2025-10-31 00:42:54,053 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py
2025-10-31 00:42:54,053 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py
2025-10-31 00:42:54,053 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:42:54,054 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:42:54,056 [ scc.git] DEBUG Calling 'git reset --hard ff6bbdc2f31f42c7a508691ae70a3a7ea17aecf1'
2025-10-31 00:42:54,060 [ scc.git] DEBUG HEAD is now at ff6bbdc merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-31 00:42:54,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:54,421 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-10-31 00:42:54,424 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-31 00:42:54,427 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- test/integration/clitest/test_export.py
- PR #174 will-moore 'Skip wells'
- test/integration/clitest/test_export.py
- Upstream changes
- CHANGELOG.md
--conflicts
2025-10-31 00:42:54,429 [ scc.config] DEBUG Found github.token
2025-10-31 00:42:54,429 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2025-10-31 00:42:54,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-31 00:42:54,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:54,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-31 00:42:54,443 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py
2025-10-31 00:42:54,443 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-10-31 00:42:54,443 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2025-10-31 00:42:54,443 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:42:54,444 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:42:54,446 [ scc.git] DEBUG Calling 'git reset --hard ff6bbdc2f31f42c7a508691ae70a3a7ea17aecf1'
2025-10-31 00:42:54,450 [ scc.git] DEBUG HEAD is now at ff6bbdc merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-31 00:42:54,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:54,820 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-10-31 00:42:54,823 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-31 00:42:54,825 [ scc.git] INFO - PR 181 will-moore 'Add labels support for import'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/zarr_import.py
--conflicts
2025-10-31 00:42:54,827 [ scc.config] DEBUG Found github.token
2025-10-31 00:42:54,827 [ scc.git] DEBUG Not adding comment to issue #181, already --conflicts.
2025-10-31 00:42:54,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-31 00:42:54,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:54,832 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-31 00:42:54,840 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-10-31 00:42:54,840 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py
2025-10-31 00:42:54,840 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:42:54,841 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:42:54,843 [ scc.git] DEBUG Calling 'git reset --hard ff6bbdc2f31f42c7a508691ae70a3a7ea17aecf1'
2025-10-31 00:42:54,847 [ scc.git] DEBUG HEAD is now at ff6bbdc merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py)
2025-10-31 00:42:55,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:42:55,224 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-10-31 00:42:55,227 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-10-31 00:42:55,229 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py'
- src/omero_zarr/zarr_import.py
- PR #181 will-moore 'Add labels support for import'
- src/omero_zarr/zarr_import.py
--conflicts
2025-10-31 00:42:55,231 [ scc.config] DEBUG Found github.token
2025-10-31 00:42:55,231 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts.
2025-10-31 00:42:55,231 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:42:55,268 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:42:55,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:42:55,270 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:42:55,306 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:42:55,310 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a855b6c50> has no local changes
2025-10-31 00:42:55,310 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:42:55,315 [ scc.git] DEBUG [detached HEAD 5dd1934] merge master -Dorg -Ssuccess-only
2025-10-31 00:42:55,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:42:55,315 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:42:55,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-10-31 00:42:56,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/644 HTTP/1.1" 200 None
2025-10-31 00:42:56,406 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:42:57,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82 HTTP/1.1" 200 None
2025-10-31 00:42:57,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:42:58,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:42:58,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/27227c3f5140c6562210f05588b43e8923856d82 HTTP/1.1" 200 None
2025-10-31 00:42:59,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/27227c3f5140c6562210f05588b43e8923856d82?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:42:59,077 [ scc.repo] DEBUG - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2025-10-31 00:42:59,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None
2025-10-31 00:43:00,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None
2025-10-31 00:43:00,034 [ scc.repo] DEBUG # ... Include label: include
2025-10-31 00:43:00,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None
2025-10-31 00:43:01,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:01,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/deca0590336231198ee955604cc63b333149f7a9 HTTP/1.1" 200 None
2025-10-31 00:43:01,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/deca0590336231198ee955604cc63b333149f7a9?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:01,938 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling'
2025-10-31 00:43:02,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-10-31 00:43:02,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-10-31 00:43:03,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-10-31 00:43:03,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-10-31 00:43:03,916 [ scc.repo] DEBUG # ... Include label: include
2025-10-31 00:43:04,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None
2025-10-31 00:43:04,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:05,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/31d53f83f21d60e0a6d262403f47be360df7fd04 HTTP/1.1" 200 None
2025-10-31 00:43:05,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/31d53f83f21d60e0a6d262403f47be360df7fd04?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:05,818 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-10-31 00:43:06,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-10-31 00:43:06,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-10-31 00:43:07,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-10-31 00:43:07,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-10-31 00:43:08,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:08,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:09,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-10-31 00:43:09,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:09,661 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-10-31 00:43:10,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-10-31 00:43:10,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-10-31 00:43:11,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None
2025-10-31 00:43:11,319 [ scc.repo] DEBUG # ... Include label: include
2025-10-31 00:43:11,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5339d86d125c90412aebd76cb7ff4a6b082d11a5 HTTP/1.1" 200 None
2025-10-31 00:43:12,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5339d86d125c90412aebd76cb7ff4a6b082d11a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:12,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5339d86d125c90412aebd76cb7ff4a6b082d11a5 HTTP/1.1" 200 None
2025-10-31 00:43:13,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/5339d86d125c90412aebd76cb7ff4a6b082d11a5?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:13,228 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-10-31 00:43:13,228 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:43:13,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-31 00:43:13,229 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:13,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:13,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:43:13,234 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:43:13,234 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:43:13,238 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:43:13,261 [ scc.git] DEBUG Updating 9cc36cde..baab5c06
2025-10-31 00:43:13,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None
2025-10-31 00:43:14,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None
2025-10-31 00:43:15,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None
2025-10-31 00:43:16,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2025-10-31 00:43:16,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-10-31 00:43:17,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-10-31 00:43:18,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-10-31 00:43:18,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-10-31 00:43:19,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-10-31 00:43:19,404 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-10-31 00:43:19,711 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-31 00:43:19,712 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-10-31 00:43:19,717 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-10-31 00:43:19,992 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-31 00:43:19,992 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-10-31 00:43:19,997 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-10-31 00:43:20,277 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-31 00:43:20,277 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-10-31 00:43:20,282 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2025-10-31 00:43:20,574 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-31 00:43:20,574 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2025-10-31 00:43:20,579 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2025-10-31 00:43:20,857 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-10-31 00:43:20,857 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2025-10-31 00:43:20,861 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:43:20,861 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:20,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:20,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5339d86d125c90412aebd76cb7ff4a6b082d11a5'
2025-10-31 00:43:20,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:20,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 5339d86d125c90412aebd76cb7ff4a6b082d11a5'
2025-10-31 00:43:20,896 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-10-31 00:43:20,896 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-10-31 00:43:20,896 [ scc.git] DEBUG Auto-merging src/index.html
2025-10-31 00:43:20,897 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:20,907 [ scc.git] DEBUG .gitignore | 2 +
2025-10-31 00:43:20,907 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 300 +++++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/css/figure.css | 18 +-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/index.html | 44 +-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 213 +++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/line.js | 220 +++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/point.js | 208 +++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 212 +++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/rect.js | 217 +++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 ++++++++++-
2025-10-31 00:43:20,907 [ scc.git] DEBUG src/js/shape_editor/text.js | 812 +++++++++++++++++++++
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/js/views/right_panel_view.js | 125 +++-
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 ++++-
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-10-31 00:43:20,908 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++---
2025-10-31 00:43:20,908 [ scc.git] DEBUG 22 files changed, 3394 insertions(+), 235 deletions(-)
2025-10-31 00:43:20,908 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-10-31 00:43:20,908 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-10-31 00:43:20,908 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-10-31 00:43:21,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:21,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-10-31 00:43:21,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:21,059 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-10-31 00:43:21,074 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:21,077 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-10-31 00:43:21,077 [ scc.git] DEBUG README.rst | 4 +-
2025-10-31 00:43:21,077 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-10-31 00:43:21,077 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-10-31 00:43:21,077 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-10-31 00:43:21,077 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-10-31 00:43:21,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:21,453 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-31 00:43:21,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:21,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-31 00:43:21,484 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-10-31 00:43:21,484 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-10-31 00:43:21,484 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-10-31 00:43:21,484 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-10-31 00:43:21,484 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-10-31 00:43:21,484 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:43:21,485 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:43:21,489 [ scc.git] DEBUG Calling 'git reset --hard 6faad6b5ea4f628b0841b5f8043a16f93cac9a98'
2025-10-31 00:43:21,495 [ scc.git] DEBUG HEAD is now at 6faad6b5 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst)
2025-10-31 00:43:21,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:21,842 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 31d53f83f21d60e0a6d262403f47be360df7fd04'
2025-10-31 00:43:21,846 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3'
2025-10-31 00:43:21,849 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-10-31 00:43:21,851 [ scc.config] DEBUG Found github.token
2025-10-31 00:43:21,851 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-10-31 00:43:21,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...deca0590336231198ee955604cc63b333149f7a9'
2025-10-31 00:43:21,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:21,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) deca0590336231198ee955604cc63b333149f7a9'
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js
2025-10-31 00:43:21,882 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:43:21,882 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:43:21,887 [ scc.git] DEBUG Calling 'git reset --hard 6faad6b5ea4f628b0841b5f8043a16f93cac9a98'
2025-10-31 00:43:21,894 [ scc.git] DEBUG HEAD is now at 6faad6b5 merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst)
2025-10-31 00:43:22,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:22,236 [ scc.git] DEBUG Calling 'git merge-base baab5c06714c374450f7312b1563a593bde691c3 deca0590336231198ee955604cc63b333149f7a9'
2025-10-31 00:43:22,240 [ scc.git] DEBUG Calling 'git diff --name-only 6f04c413f7eceadf9e66e35f524d44413ae0ef46..baab5c06714c374450f7312b1563a593bde691c3'
2025-10-31 00:43:22,244 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/shape_editor/rect.js
- src/js/shape_editor/shape_manager.js
--conflicts
2025-10-31 00:43:22,246 [ scc.config] DEBUG Found github.token
2025-10-31 00:43:22,246 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts.
2025-10-31 00:43:22,246 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...27227c3f5140c6562210f05588b43e8923856d82'
2025-10-31 00:43:22,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:22,255 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Bump vite from 6.2.6 to 6.4.1) 27227c3f5140c6562210f05588b43e8923856d82'
2025-10-31 00:43:22,270 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:22,274 [ scc.git] DEBUG package-lock.json | 92 ++++++++++++++++++++++++++++++++++++++++++++++++++++---
2025-10-31 00:43:22,274 [ scc.git] DEBUG package.json | 2 +-
2025-10-31 00:43:22,274 [ scc.git] DEBUG 2 files changed, 88 insertions(+), 6 deletions(-)
2025-10-31 00:43:22,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:22,652 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:43:22,690 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:22,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:22,692 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:43:22,727 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:43:22,732 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a85576290> has no local changes
2025-10-31 00:43:22,732 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..baab5c06
Previously merged:
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:43:22,740 [ scc.git] DEBUG [detached HEAD e5a38e7e] merge master -Dorg -Ssuccess-only
2025-10-31 00:43:22,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:43:22,740 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:43:23,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-10-31 00:43:23,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2025-10-31 00:43:23,776 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:24,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-10-31 00:43:24,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:25,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:25,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-10-31 00:43:26,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:26,289 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:43:26,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-10-31 00:43:27,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-10-31 00:43:27,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-10-31 00:43:28,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:28,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-10-31 00:43:29,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:29,172 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-10-31 00:43:29,172 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:43:29,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-31 00:43:29,172 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:29,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:29,175 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:43:29,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:43:29,177 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:43:29,180 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:43:29,182 [ scc.git] DEBUG Already up to date.
2025-10-31 00:43:29,182 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-10-31 00:43:29,470 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-10-31 00:43:29,470 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-10-31 00:43:29,474 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2025-10-31 00:43:29,742 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-10-31 00:43:29,742 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2025-10-31 00:43:29,746 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:43:29,746 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:29,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:29,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-10-31 00:43:29,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:29,754 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-10-31 00:43:29,760 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-10-31 00:43:29,761 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:29,763 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-10-31 00:43:29,763 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-10-31 00:43:29,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:29,906 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-10-31 00:43:29,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:29,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-10-31 00:43:29,918 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:29,920 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:43:29,920 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:43:30,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:30,304 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:43:30,339 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:30,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:30,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:43:30,376 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:43:30,378 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a855b7610> has no local changes
2025-10-31 00:43:30,379 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:43:30,384 [ scc.git] DEBUG [detached HEAD 574a3a0] merge master -Dorg -Ssuccess-only
2025-10-31 00:43:30,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:43:30,384 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:43:30,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-10-31 00:43:31,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-10-31 00:43:31,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-10-31 00:43:32,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-10-31 00:43:32,280 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:32,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-10-31 00:43:33,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:33,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:34,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-10-31 00:43:34,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:34,832 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-10-31 00:43:35,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-10-31 00:43:35,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-10-31 00:43:36,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-10-31 00:43:36,344 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:36,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-10-31 00:43:37,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:38,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:38,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-10-31 00:43:39,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:39,062 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-10-31 00:43:39,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-10-31 00:43:39,557 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:40,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-10-31 00:43:40,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:41,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:41,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-10-31 00:43:42,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:42,063 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-10-31 00:43:42,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-10-31 00:43:42,545 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:43,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-10-31 00:43:43,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:44,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:44,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-10-31 00:43:45,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:45,065 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-10-31 00:43:45,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-10-31 00:43:46,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-10-31 00:43:46,008 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:46,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-10-31 00:43:47,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:47,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:48,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-10-31 00:43:48,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:48,562 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-10-31 00:43:49,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-10-31 00:43:49,042 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:49,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-10-31 00:43:50,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:50,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:51,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-10-31 00:43:51,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:51,654 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-10-31 00:43:52,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-10-31 00:43:52,114 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:43:52,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-10-31 00:43:53,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:43:53,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:43:54,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-10-31 00:43:54,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:43:54,736 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-10-31 00:43:54,736 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:43:54,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-31 00:43:54,737 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:54,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:54,740 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:43:54,742 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:43:54,742 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:43:54,744 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:43:54,747 [ scc.git] DEBUG Already up to date.
2025-10-31 00:43:54,747 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-10-31 00:43:55,035 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:55,035 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-10-31 00:43:55,039 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-10-31 00:43:55,318 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:55,318 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-10-31 00:43:55,323 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-10-31 00:43:55,602 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:55,602 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-10-31 00:43:55,606 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-10-31 00:43:55,879 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:55,879 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-10-31 00:43:55,883 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-10-31 00:43:56,190 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:56,190 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-10-31 00:43:56,194 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-10-31 00:43:56,468 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:56,468 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-10-31 00:43:56,472 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-10-31 00:43:56,748 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-10-31 00:43:56,748 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-10-31 00:43:56,752 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:43:56,752 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:56,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:56,755 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-10-31 00:43:56,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:56,759 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-10-31 00:43:56,767 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:56,772 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-10-31 00:43:56,772 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-10-31 00:43:56,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:56,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-10-31 00:43:56,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:56,914 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-10-31 00:43:56,929 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:43:56,930 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:56,934 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-10-31 00:43:56,934 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-10-31 00:43:57,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:57,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-31 00:43:57,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:57,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-31 00:43:57,314 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:43:57,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-31 00:43:57,314 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:43:57,314 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:43:57,317 [ scc.git] DEBUG Calling 'git reset --hard 34cb3a4fc97e3108195e0647720bd6233afe9674'
2025-10-31 00:43:57,321 [ scc.git] DEBUG HEAD is now at 34cb3a4 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-10-31 00:43:57,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:57,693 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-10-31 00:43:57,696 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-31 00:43:57,698 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-10-31 00:43:57,700 [ scc.config] DEBUG Found github.token
2025-10-31 00:43:57,700 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-10-31 00:43:57,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-10-31 00:43:57,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:57,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-10-31 00:43:57,720 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:43:57,721 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:57,725 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-10-31 00:43:57,725 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-10-31 00:43:58,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:58,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-10-31 00:43:58,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:58,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-10-31 00:43:58,113 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:43:58,113 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:43:58,118 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-10-31 00:43:58,118 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-10-31 00:43:58,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:58,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-31 00:43:58,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:58,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-31 00:43:58,507 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:43:58,507 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-31 00:43:58,507 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:43:58,507 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:43:58,510 [ scc.git] DEBUG Calling 'git reset --hard 04beb01313ee9c3900768b054975fa650e7ec3fa'
2025-10-31 00:43:58,514 [ scc.git] DEBUG HEAD is now at 04beb01 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-10-31 00:43:58,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:58,889 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-10-31 00:43:58,892 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-31 00:43:58,894 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-10-31 00:43:58,897 [ scc.config] DEBUG Found github.token
2025-10-31 00:43:58,897 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-10-31 00:43:58,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-31 00:43:58,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:58,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-31 00:43:58,920 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:43:58,920 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-31 00:43:58,920 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:43:58,920 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:43:58,923 [ scc.git] DEBUG Calling 'git reset --hard 04beb01313ee9c3900768b054975fa650e7ec3fa'
2025-10-31 00:43:58,927 [ scc.git] DEBUG HEAD is now at 04beb01 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-10-31 00:43:59,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:43:59,327 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-10-31 00:43:59,329 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-10-31 00:43:59,332 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-10-31 00:43:59,334 [ scc.config] DEBUG Found github.token
2025-10-31 00:43:59,334 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-10-31 00:43:59,334 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:43:59,372 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:43:59,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:43:59,374 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:43:59,410 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:43:59,415 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a8569f290> has no local changes
2025-10-31 00:43:59,415 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:43:59,420 [ scc.git] DEBUG [detached HEAD e872183] merge master -Dorg -Ssuccess-only
2025-10-31 00:43:59,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:43:59,420 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:43:59,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-10-31 00:44:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None
2025-10-31 00:44:00,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-10-31 00:44:01,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-10-31 00:44:02,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-10-31 00:44:02,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-10-31 00:44:02,586 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:44:03,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-10-31 00:44:03,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:04,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:04,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-10-31 00:44:05,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:05,316 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-10-31 00:44:05,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-10-31 00:44:05,771 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:44:06,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-10-31 00:44:06,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:07,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:08,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-10-31 00:44:08,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:08,419 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-10-31 00:44:08,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-10-31 00:44:09,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-10-31 00:44:09,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-10-31 00:44:10,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-10-31 00:44:10,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-10-31 00:44:11,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:11,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-10-31 00:44:12,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:12,213 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-10-31 00:44:12,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-10-31 00:44:13,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-10-31 00:44:13,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-10-31 00:44:14,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:14,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-10-31 00:44:15,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:15,040 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-10-31 00:44:15,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-10-31 00:44:15,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-10-31 00:44:16,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-10-31 00:44:16,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:17,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-10-31 00:44:17,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:17,851 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-10-31 00:44:18,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-10-31 00:44:18,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-10-31 00:44:19,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-10-31 00:44:19,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:20,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:20,221 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:44:20,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-31 00:44:20,222 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:20,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:20,224 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:44:20,226 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:44:20,227 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:44:20,229 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:44:20,236 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-10-31 00:44:20,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-10-31 00:44:20,914 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-10-31 00:44:21,218 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-31 00:44:21,218 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-10-31 00:44:21,222 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-10-31 00:44:21,498 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-31 00:44:21,498 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-10-31 00:44:21,502 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-10-31 00:44:21,787 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-31 00:44:21,787 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-10-31 00:44:21,791 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-10-31 00:44:22,064 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-31 00:44:22,064 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-10-31 00:44:22,068 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-10-31 00:44:22,349 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-10-31 00:44:22,350 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-10-31 00:44:22,353 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:44:22,353 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:22,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:22,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-10-31 00:44:22,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:22,362 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-10-31 00:44:22,373 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-10-31 00:44:22,374 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-10-31 00:44:22,375 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:22,378 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-10-31 00:44:22,378 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-10-31 00:44:22,378 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-10-31 00:44:22,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:22,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-10-31 00:44:22,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:22,517 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-10-31 00:44:22,534 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-10-31 00:44:22,534 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-10-31 00:44:22,534 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-10-31 00:44:22,534 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-10-31 00:44:22,535 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:22,539 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-10-31 00:44:22,540 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-10-31 00:44:22,540 [ scc.git] DEBUG src/app/header.html | 5 +
2025-10-31 00:44:22,540 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-10-31 00:44:22,540 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-10-31 00:44:22,540 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-10-31 00:44:22,540 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-10-31 00:44:22,540 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-10-31 00:44:23,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:23,065 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-10-31 00:44:23,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:23,072 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-10-31 00:44:23,083 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-10-31 00:44:23,083 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:23,086 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-10-31 00:44:23,086 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-10-31 00:44:23,086 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-10-31 00:44:23,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:23,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-10-31 00:44:23,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:23,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-10-31 00:44:23,479 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:23,489 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-10-31 00:44:23,489 [ scc.git] DEBUG package.json | 2 +-
2025-10-31 00:44:23,489 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-10-31 00:44:23,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:23,853 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-31 00:44:23,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:23,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-31 00:44:23,897 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:44:23,897 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-10-31 00:44:23,898 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:44:23,898 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:44:23,901 [ scc.git] DEBUG Calling 'git reset --hard 7012f8df067a8da83806d3fa8e8913608933c197'
2025-10-31 00:44:23,908 [ scc.git] DEBUG HEAD is now at 7012f8d merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-10-31 00:44:24,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:24,241 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-10-31 00:44:24,243 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-10-31 00:44:24,246 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-10-31 00:44:24,248 [ scc.config] DEBUG Found github.token
2025-10-31 00:44:24,248 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-10-31 00:44:24,248 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:44:24,283 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:24,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:24,285 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:44:24,320 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:44:24,326 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a843b3d10> has no local changes
2025-10-31 00:44:24,326 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:44:24,332 [ scc.git] DEBUG [detached HEAD 78281ff] merge master -Dorg -Ssuccess-only
2025-10-31 00:44:24,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:44:24,333 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:44:24,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-10-31 00:44:25,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2025-10-31 00:44:25,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2025-10-31 00:44:25,751 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:44:26,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-10-31 00:44:26,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:27,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:27,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-10-31 00:44:28,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:28,271 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:44:28,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-10-31 00:44:29,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-10-31 00:44:29,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:30,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-10-31 00:44:30,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:30,617 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:44:31,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-10-31 00:44:31,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-10-31 00:44:32,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-10-31 00:44:32,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:33,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-10-31 00:44:33,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:33,504 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-10-31 00:44:33,504 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:44:33,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-31 00:44:33,505 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:33,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:33,507 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:44:33,509 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:44:33,509 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:44:33,512 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:44:33,515 [ scc.git] DEBUG Already up to date.
2025-10-31 00:44:33,515 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-10-31 00:44:33,793 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-31 00:44:33,793 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-10-31 00:44:33,797 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-10-31 00:44:34,082 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-31 00:44:34,082 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-10-31 00:44:34,085 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2025-10-31 00:44:34,359 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-10-31 00:44:34,359 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2025-10-31 00:44:34,363 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:44:34,363 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:34,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:34,365 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-10-31 00:44:34,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:34,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-10-31 00:44:34,378 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:34,381 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-10-31 00:44:34,381 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-10-31 00:44:34,381 [ scc.git] DEBUG requirements.txt | 2 +-
2025-10-31 00:44:34,381 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-10-31 00:44:34,381 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-10-31 00:44:34,381 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-10-31 00:44:34,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:34,534 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-10-31 00:44:34,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:34,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-10-31 00:44:34,548 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:34,550 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:44:34,550 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:44:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:34,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-31 00:44:34,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:34,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-31 00:44:34,933 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-10-31 00:44:34,933 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2025-10-31 00:44:34,933 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:44:34,934 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:44:34,936 [ scc.git] DEBUG Calling 'git reset --hard 85f41ad28a465b878886465724f9fafde07884cd'
2025-10-31 00:44:34,940 [ scc.git] DEBUG HEAD is now at 85f41ad merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2025-10-31 00:44:35,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:35,311 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-10-31 00:44:35,313 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2025-10-31 00:44:35,316 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2025-10-31 00:44:35,318 [ scc.config] DEBUG Found github.token
2025-10-31 00:44:35,318 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2025-10-31 00:44:35,318 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:44:35,353 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:35,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:35,355 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:44:35,391 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:44:35,394 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a843cb410> has no local changes
2025-10-31 00:44:35,394 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:44:35,400 [ scc.git] DEBUG [detached HEAD 7bc00f3] merge master -Dorg -Ssuccess-only
2025-10-31 00:44:35,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:44:35,400 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:44:36,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-10-31 00:44:36,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-10-31 00:44:36,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-10-31 00:44:37,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-10-31 00:44:38,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:38,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-10-31 00:44:39,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:39,190 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-10-31 00:44:39,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-10-31 00:44:40,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-10-31 00:44:40,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-10-31 00:44:41,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:41,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-10-31 00:44:42,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:42,120 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-10-31 00:44:42,120 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:44:42,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-31 00:44:42,121 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:42,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:42,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:44:42,125 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:44:42,125 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:44:42,128 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:44:42,134 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-10-31 00:44:42,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-10-31 00:44:42,829 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-10-31 00:44:43,111 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-10-31 00:44:43,111 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-10-31 00:44:43,114 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-10-31 00:44:43,396 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-10-31 00:44:43,397 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-10-31 00:44:43,401 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:44:43,401 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:43,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:43,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-31 00:44:43,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:43,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-31 00:44:43,421 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-10-31 00:44:43,421 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-10-31 00:44:43,421 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-10-31 00:44:43,421 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-10-31 00:44:43,421 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:44:43,421 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:44:43,424 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-31 00:44:43,428 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-31 00:44:43,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:43,601 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-10-31 00:44:43,605 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-31 00:44:43,608 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2025-10-31 00:44:43,610 [ scc.config] DEBUG Found github.token
2025-10-31 00:44:43,610 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-10-31 00:44:43,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-31 00:44:43,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:43,616 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-31 00:44:43,630 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-10-31 00:44:43,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-10-31 00:44:43,630 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-10-31 00:44:43,630 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:44:43,630 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:44:43,633 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-31 00:44:43,637 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-10-31 00:44:43,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:43,989 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-10-31 00:44:43,993 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-10-31 00:44:43,996 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-10-31 00:44:43,998 [ scc.config] DEBUG Found github.token
2025-10-31 00:44:43,998 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-10-31 00:44:43,998 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:44:44,035 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:44,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:44,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:44:44,072 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:44:44,076 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a85577b90> has no local changes
2025-10-31 00:44:44,076 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:44:44,081 [ scc.git] DEBUG [detached HEAD c1d0785] merge master -Dorg -Ssuccess-only
2025-10-31 00:44:44,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:44:44,081 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:44:44,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-10-31 00:44:45,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-10-31 00:44:45,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-10-31 00:44:46,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:46,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:47,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-10-31 00:44:47,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:47,542 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:44:48,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-10-31 00:44:48,021 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:44:48,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-10-31 00:44:49,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:49,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:50,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-10-31 00:44:50,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:50,586 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-10-31 00:44:51,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-10-31 00:44:51,032 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:44:51,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-10-31 00:44:52,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:44:52,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:44:53,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-10-31 00:44:53,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:44:53,514 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-10-31 00:44:53,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-10-31 00:44:54,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-10-31 00:44:54,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-10-31 00:44:55,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-10-31 00:44:55,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-10-31 00:44:56,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-10-31 00:44:56,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-10-31 00:44:56,873 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:44:56,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-31 00:44:56,874 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:56,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:56,876 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:44:56,878 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:44:56,878 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:44:56,881 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:44:56,883 [ scc.git] DEBUG Already up to date.
2025-10-31 00:44:56,884 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-10-31 00:44:57,166 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-31 00:44:57,166 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-10-31 00:44:57,170 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-10-31 00:44:57,451 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-31 00:44:57,451 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-10-31 00:44:57,456 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-10-31 00:44:57,733 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-10-31 00:44:57,733 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-10-31 00:44:57,736 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:44:57,736 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:57,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:57,739 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-10-31 00:44:57,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:57,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-10-31 00:44:57,750 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:57,754 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-10-31 00:44:57,754 [ scc.git] DEBUG package.json | 2 +-
2025-10-31 00:44:57,754 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-10-31 00:44:57,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:57,899 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-10-31 00:44:57,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:57,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-10-31 00:44:57,912 [ scc.git] DEBUG Auto-merging package-lock.json
2025-10-31 00:44:57,912 [ scc.git] DEBUG Auto-merging package.json
2025-10-31 00:44:57,913 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:57,916 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-10-31 00:44:57,916 [ scc.git] DEBUG package.json | 2 +-
2025-10-31 00:44:57,916 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-10-31 00:44:58,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:58,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-10-31 00:44:58,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:58,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-10-31 00:44:58,349 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:44:58,351 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:44:58,351 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:44:58,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:44:58,735 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:44:58,772 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:44:58,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:44:58,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:44:58,809 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:44:58,812 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a8550acd0> has no local changes
2025-10-31 00:44:58,813 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:44:58,818 [ scc.git] DEBUG [detached HEAD 6192616] merge master -Dorg -Ssuccess-only
2025-10-31 00:44:58,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:44:58,818 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:44:59,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2025-10-31 00:44:59,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2025-10-31 00:44:59,737 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:00,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-10-31 00:45:01,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:01,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:02,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-10-31 00:45:02,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:02,852 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:02,852 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:02,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-31 00:45:02,852 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:02,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:02,855 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:02,857 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:02,857 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:02,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:02,862 [ scc.git] DEBUG Already up to date.
2025-10-31 00:45:02,862 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-10-31 00:45:03,171 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2025-10-31 00:45:03,171 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-10-31 00:45:03,175 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:03,175 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:03,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:03,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2025-10-31 00:45:03,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:03,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2025-10-31 00:45:03,188 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:03,190 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:03,190 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:03,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:03,344 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:03,381 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:03,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:03,383 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:03,420 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:03,423 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a844082d0> has no local changes
2025-10-31 00:45:03,423 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:03,428 [ scc.git] DEBUG [detached HEAD 6cb0938] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:03,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:03,428 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:03,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-10-31 00:45:04,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2025-10-31 00:45:04,408 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:04,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-31 00:45:05,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:06,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:06,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-31 00:45:06,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:07,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-10-31 00:45:08,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2025-10-31 00:45:08,070 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:08,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-10-31 00:45:09,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-10-31 00:45:09,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-31 00:45:10,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:10,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:11,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-31 00:45:11,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:12,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-10-31 00:45:12,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-10-31 00:45:12,468 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-10-31 00:45:12,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-10-31 00:45:12,938 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:12,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-31 00:45:12,938 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:12,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:12,940 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:12,942 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:12,942 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:12,945 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:12,947 [ scc.git] DEBUG Already up to date.
2025-10-31 00:45:12,947 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-10-31 00:45:13,226 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-10-31 00:45:13,226 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-10-31 00:45:13,231 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2025-10-31 00:45:13,503 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-10-31 00:45:13,503 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2025-10-31 00:45:13,507 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:13,507 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:13,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:13,509 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-10-31 00:45:13,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:13,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-10-31 00:45:13,520 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:13,523 [ scc.git] DEBUG setup.py | 4 +-
2025-10-31 00:45:13,523 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-10-31 00:45:13,523 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-10-31 00:45:13,523 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-10-31 00:45:13,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:13,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2025-10-31 00:45:13,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:13,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2025-10-31 00:45:13,684 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:13,687 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:13,687 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:14,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:14,086 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:14,124 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:14,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:14,126 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:14,162 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:14,165 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a8440a550> has no local changes
2025-10-31 00:45:14,165 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:14,170 [ scc.git] DEBUG [detached HEAD f78cb02] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:14,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:14,171 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:14,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-10-31 00:45:15,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2025-10-31 00:45:15,137 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:15,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-10-31 00:45:16,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:16,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:17,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-10-31 00:45:17,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:17,698 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:18,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-10-31 00:45:18,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-10-31 00:45:19,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-10-31 00:45:19,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:20,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-10-31 00:45:20,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:20,620 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-10-31 00:45:20,620 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:20,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-31 00:45:20,620 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:20,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:20,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:20,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:20,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:20,627 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:20,630 [ scc.git] DEBUG Already up to date.
2025-10-31 00:45:20,630 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-10-31 00:45:20,936 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-10-31 00:45:20,937 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-10-31 00:45:20,941 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-10-31 00:45:21,215 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-10-31 00:45:21,215 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-10-31 00:45:21,219 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:21,220 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:21,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:21,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-31 00:45:21,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:21,226 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-31 00:45:21,234 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG Auto-merging setup.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-10-31 00:45:21,234 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:45:21,234 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:45:21,237 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-10-31 00:45:21,241 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-10-31 00:45:21,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:21,392 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-10-31 00:45:21,394 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-10-31 00:45:21,397 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- omero_signup/signup_settings.py
- omero_signup/urls.py
- setup.py
--conflicts
2025-10-31 00:45:21,399 [ scc.config] DEBUG Found github.token
2025-10-31 00:45:21,399 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-10-31 00:45:21,399 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-10-31 00:45:21,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:21,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-10-31 00:45:21,410 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:21,412 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:21,412 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:21,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:21,781 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:21,817 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:21,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:21,819 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:21,855 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:21,857 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a8441ba10> has no local changes
2025-10-31 00:45:21,858 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:21,863 [ scc.git] DEBUG [detached HEAD 8212f9f] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:21,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:21,863 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:22,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-10-31 00:45:22,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-10-31 00:45:23,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-10-31 00:45:23,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:24,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:24,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-10-31 00:45:25,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:25,226 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-10-31 00:45:25,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-10-31 00:45:26,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-10-31 00:45:26,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-10-31 00:45:27,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:27,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:28,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-10-31 00:45:28,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-10-31 00:45:29,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-10-31 00:45:29,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-10-31 00:45:30,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-10-31 00:45:30,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:30,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-10-31 00:45:31,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:31,385 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-10-31 00:45:31,385 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:31,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-31 00:45:31,385 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:31,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:31,388 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:31,390 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:31,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:31,392 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:31,398 [ scc.git] DEBUG Updating cda3ec6..40b2517
2025-10-31 00:45:32,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None
2025-10-31 00:45:32,053 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-10-31 00:45:32,350 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-10-31 00:45:32,350 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-10-31 00:45:32,353 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-10-31 00:45:32,637 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-10-31 00:45:32,637 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-10-31 00:45:32,641 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:32,641 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:32,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:32,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-10-31 00:45:32,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:32,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-10-31 00:45:32,659 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-10-31 00:45:32,662 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-10-31 00:45:32,663 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-10-31 00:45:32,664 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-10-31 00:45:32,664 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-10-31 00:45:32,664 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-10-31 00:45:32,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:32,814 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-10-31 00:45:32,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:32,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-10-31 00:45:32,828 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:32,831 [ scc.git] DEBUG docker | 1 +
2025-10-31 00:45:32,831 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-10-31 00:45:33,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:33,215 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:33,251 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:33,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:33,253 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:33,289 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:33,292 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a84428f90> has no local changes
2025-10-31 00:45:33,292 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Updating cda3ec6..40b2517
Previously merged:
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:33,297 [ scc.git] DEBUG [detached HEAD f3bfc98] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:33,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:33,298 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:33,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2025-10-31 00:45:34,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2025-10-31 00:45:34,293 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:34,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-10-31 00:45:35,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:35,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:36,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-10-31 00:45:36,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:36,765 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:36,765 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:36,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-31 00:45:36,765 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:36,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:36,768 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:36,770 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:36,770 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:36,773 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:36,775 [ scc.git] DEBUG Already up to date.
2025-10-31 00:45:36,775 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-10-31 00:45:37,065 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2025-10-31 00:45:37,065 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-10-31 00:45:37,069 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:37,069 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:37,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:37,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-10-31 00:45:37,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:37,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-10-31 00:45:37,082 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:37,085 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:37,085 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:37,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:37,231 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:37,268 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:37,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:37,270 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:37,305 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:37,307 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a843f2690> has no local changes
2025-10-31 00:45:37,307 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:37,313 [ scc.git] DEBUG [detached HEAD 1d7c978] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:37,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:37,313 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:37,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-10-31 00:45:38,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2025-10-31 00:45:38,167 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:38,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-10-31 00:45:39,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:39,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:40,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-10-31 00:45:40,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:40,825 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:40,825 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:40,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-31 00:45:40,825 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:40,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:40,827 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:40,829 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:40,829 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:40,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:40,839 [ scc.git] DEBUG Updating deab817..160d894
2025-10-31 00:45:41,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-10-31 00:45:41,496 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-10-31 00:45:41,771 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-10-31 00:45:41,771 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-10-31 00:45:41,774 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:41,775 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:41,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:41,777 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-10-31 00:45:41,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:41,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-10-31 00:45:41,788 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:41,790 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:41,790 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:41,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:41,929 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:41,965 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:41,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:41,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:42,003 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:42,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a84445910> has no local changes
2025-10-31 00:45:42,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:42,011 [ scc.git] DEBUG [detached HEAD 035666c] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:42,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:42,011 [ scc.git] INFO Overriding base-branch from master to main
2025-10-31 00:45:42,011 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:42,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-10-31 00:45:42,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2025-10-31 00:45:43,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2025-10-31 00:45:43,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-10-31 00:45:44,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:44,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:45,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-10-31 00:45:45,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:45,938 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2025-10-31 00:45:46,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-10-31 00:45:47,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-10-31 00:45:47,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-10-31 00:45:48,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-10-31 00:45:48,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:48,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-10-31 00:45:49,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:49,348 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-10-31 00:45:49,348 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:49,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-31 00:45:49,349 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:49,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:49,351 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-10-31 00:45:49,353 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:49,353 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-10-31 00:45:49,356 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-10-31 00:45:49,362 [ scc.git] DEBUG Updating 8f3c313..00e0207
2025-10-31 00:45:49,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2025-10-31 00:45:49,993 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-10-31 00:45:50,270 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-10-31 00:45:50,270 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-10-31 00:45:50,274 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2025-10-31 00:45:50,551 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-10-31 00:45:50,552 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2025-10-31 00:45:50,555 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:50,555 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:50,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:50,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-31 00:45:50,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:50,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-31 00:45:50,570 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-10-31 00:45:50,570 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-10-31 00:45:50,570 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-10-31 00:45:50,570 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:45:50,570 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:45:50,573 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-10-31 00:45:50,576 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-10-31 00:45:50,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:50,777 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-10-31 00:45:50,779 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-10-31 00:45:50,782 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-10-31 00:45:50,784 [ scc.config] DEBUG Found github.token
2025-10-31 00:45:50,784 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-10-31 00:45:50,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-10-31 00:45:50,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:50,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-10-31 00:45:50,796 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-10-31 00:45:50,797 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:50,800 [ scc.git] DEBUG README.rst | 3 +
2025-10-31 00:45:50,800 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2025-10-31 00:45:50,800 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2025-10-31 00:45:50,800 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2025-10-31 00:45:50,800 [ scc.git] DEBUG setup.py | 5 +-
2025-10-31 00:45:50,800 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2025-10-31 00:45:50,800 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2025-10-31 00:45:51,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:51,177 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:51,212 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:51,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:51,214 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:51,249 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:51,252 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a84486490> has no local changes
2025-10-31 00:45:51,252 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:51,257 [ scc.git] DEBUG [detached HEAD 7b7204b] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:51,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:51,257 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:51,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2025-10-31 00:45:52,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2025-10-31 00:45:52,156 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:52,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-10-31 00:45:53,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:53,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:54,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-10-31 00:45:54,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:54,711 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:54,711 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:54,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-31 00:45:54,711 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:54,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:54,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:54,716 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:54,716 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:54,718 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:54,721 [ scc.git] DEBUG Already up to date.
2025-10-31 00:45:54,721 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2025-10-31 00:45:55,014 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2025-10-31 00:45:55,015 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2025-10-31 00:45:55,018 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:55,018 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:55,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:55,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-10-31 00:45:55,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:55,025 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-10-31 00:45:55,031 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:55,034 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:55,034 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:55,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:55,181 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:55,218 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:55,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:55,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:55,255 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:55,258 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a84437410> has no local changes
2025-10-31 00:45:55,258 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:55,263 [ scc.git] DEBUG [detached HEAD e519c5a] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:55,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:55,264 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:55,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2025-10-31 00:45:56,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2025-10-31 00:45:56,231 [ scc.repo] DEBUG # ... Include label: dependencies
2025-10-31 00:45:56,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-10-31 00:45:57,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:45:57,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:45:58,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-10-31 00:45:58,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:45:58,728 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:45:58,728 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:45:58,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-31 00:45:58,728 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:58,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:58,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:45:58,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:45:58,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:45:58,735 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:45:58,738 [ scc.git] DEBUG Already up to date.
2025-10-31 00:45:58,738 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2025-10-31 00:45:59,029 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2025-10-31 00:45:59,030 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2025-10-31 00:45:59,033 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:45:59,033 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:59,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:59,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-10-31 00:45:59,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:59,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-10-31 00:45:59,046 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:45:59,049 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-10-31 00:45:59,049 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-10-31 00:45:59,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:45:59,191 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:45:59,227 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:45:59,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:45:59,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:45:59,266 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:45:59,269 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a84462550> has no local changes
2025-10-31 00:45:59,269 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:45:59,274 [ scc.git] DEBUG [detached HEAD caaa904] merge master -Dorg -Ssuccess-only
2025-10-31 00:45:59,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:45:59,274 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:45:59,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-10-31 00:46:00,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-10-31 00:46:00,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-10-31 00:46:01,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-10-31 00:46:01,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:46:02,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-10-31 00:46:02,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:46:02,634 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-10-31 00:46:02,634 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:46:02,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-31 00:46:02,634 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:46:02,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:02,636 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-10-31 00:46:02,639 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:46:02,639 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-10-31 00:46:02,641 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-10-31 00:46:02,644 [ scc.git] DEBUG Already up to date.
2025-10-31 00:46:02,644 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-10-31 00:46:02,920 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-10-31 00:46:02,920 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-10-31 00:46:02,923 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:46:02,924 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:46:02,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:02,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-31 00:46:02,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:02,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-31 00:46:02,937 [ scc.git] DEBUG Auto-merging Dockerfile
2025-10-31 00:46:02,937 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-10-31 00:46:02,938 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:46:02,938 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:46:02,940 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-10-31 00:46:02,944 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-10-31 00:46:03,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:03,086 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-10-31 00:46:03,088 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-10-31 00:46:03,090 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-10-31 00:46:03,092 [ scc.config] DEBUG Found github.token
2025-10-31 00:46:03,092 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-10-31 00:46:03,092 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:46:03,130 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:46:03,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:03,132 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:46:03,168 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:46:03,171 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a8428ea10> has no local changes
2025-10-31 00:46:03,171 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:46:03,177 [ scc.git] DEBUG [detached HEAD 1b0112d] merge master -Dorg -Ssuccess-only
2025-10-31 00:46:03,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:03,177 [ scc.git] INFO Overriding base-branch from master to develop
2025-10-31 00:46:03,177 [ scc.repo] DEBUG ## PRs found:
2025-10-31 00:46:03,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-10-31 00:46:04,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-10-31 00:46:04,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-10-31 00:46:05,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-10-31 00:46:05,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:46:06,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-10-31 00:46:06,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-10-31 00:46:07,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:46:07,076 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-10-31 00:46:07,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-10-31 00:46:08,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-10-31 00:46:08,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-10-31 00:46:08,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-10-31 00:46:09,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-10-31 00:46:09,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-10-31 00:46:09,863 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-10-31 00:46:10,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-10-31 00:46:10,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-10-31 00:46:11,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-10-31 00:46:11,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-10-31 00:46:11,809 [ scc.repo] DEBUG ## Branches found:
2025-10-31 00:46:11,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-31 00:46:11,809 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:46:11,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:11,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-10-31 00:46:11,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-10-31 00:46:11,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-10-31 00:46:11,817 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-10-31 00:46:11,825 [ scc.git] DEBUG Updating 4b4c755..03b9116
2025-10-31 00:46:12,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2025-10-31 00:46:13,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-10-31 00:46:13,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-10-31 00:46:13,753 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-10-31 00:46:14,051 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-10-31 00:46:14,051 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-10-31 00:46:14,056 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-10-31 00:46:14,342 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-10-31 00:46:14,342 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-10-31 00:46:14,346 [ scc.git] DEBUG ## Unique users: []
2025-10-31 00:46:14,346 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:46:14,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:14,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-31 00:46:14,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:14,356 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-31 00:46:14,365 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-10-31 00:46:14,365 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-10-31 00:46:14,365 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-10-31 00:46:14,368 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5'
2025-10-31 00:46:14,371 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-10-31 00:46:14,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:14,541 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-10-31 00:46:14,546 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5'
2025-10-31 00:46:14,549 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#572](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-10-31 00:46:14,551 [ scc.config] DEBUG Found github.token
2025-10-31 00:46:14,551 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-10-31 00:46:14,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-10-31 00:46:14,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:14,557 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-10-31 00:46:14,565 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-10-31 00:46:14,568 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-10-31 00:46:14,568 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-10-31 00:46:14,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:14,935 [ scc.git] DEBUG Calling 'git submodule update'
2025-10-31 00:46:14,972 [ scc.git] DEBUG Get sha1 of %s
2025-10-31 00:46:14,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-10-31 00:46:14,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:46:15,010 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:46:15,013 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a84287cd0> has no local changes
2025-10-31 00:46:15,014 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:46:15,019 [ scc.git] DEBUG [detached HEAD c231f5a] merge master -Dorg -Ssuccess-only
2025-10-31 00:46:15,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:15,019 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-10-31 00:46:15,086 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-10-31 00:46:15,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:15,333 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-10-31 00:46:15,335 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-10-31 00:46:15,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:15,737 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-10-31 00:46:15,739 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-10-31 00:46:16,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:16,129 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-10-31 00:46:16,131 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-10-31 00:46:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:16,532 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-10-31 00:46:16,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:16,972 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-10-31 00:46:16,974 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-10-31 00:46:17,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:17,370 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-10-31 00:46:17,372 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-10-31 00:46:17,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:17,759 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-10-31 00:46:17,760 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-10-31 00:46:18,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:18,151 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-10-31 00:46:18,153 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-10-31 00:46:18,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:18,545 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-10-31 00:46:18,547 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-10-31 00:46:18,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:18,930 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-10-31 00:46:18,932 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-10-31 00:46:19,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:19,320 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-10-31 00:46:19,322 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-10-31 00:46:19,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:19,710 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-10-31 00:46:19,711 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-10-31 00:46:20,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:20,145 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-10-31 00:46:20,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:20,541 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-10-31 00:46:20,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:20,939 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-10-31 00:46:20,941 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-10-31 00:46:21,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:21,332 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-10-31 00:46:21,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:21,734 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-10-31 00:46:22,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:22,119 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-10-31 00:46:22,121 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-10-31 00:46:22,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:22,512 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-10-31 00:46:22,514 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-10-31 00:46:22,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:22,910 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-10-31 00:46:22,912 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-10-31 00:46:23,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:23,305 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-10-31 00:46:23,307 [ scc.config] DEBUG Found submodule.scripts.url
2025-10-31 00:46:23,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-10-31 00:46:23,699 [ scc.config] DEBUG Found submodule.scripts.branch
2025-10-31 00:46:23,699 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-10-31 00:46:23,772 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8a855f0110> has local changes
2025-10-31 00:46:23,772 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
Conflicting PRs (not included):
- PR 174 will-moore 'Skip wells'
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..baab5c06
Previously merged:
- PR 612 will-moore 'Script version'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 616 Rdornier 'Fix labels around border'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
Conflicting PRs (not included):
- PR 637 Rdornier 'Fix scalebar position'
- PR 643 Rdornier 'Shape scaling'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 508 will-moore 'Broadcast channel demo' (stage: draft)
- PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Updating cda3ec6..40b2517
Previously merged:
- PR 81 erickmartins 'add ulimits to omero-server container'
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#572 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/572/)'
2025-10-31 00:46:23,781 [ scc.git] DEBUG [detached HEAD 68975ac] merge master -Dorg -Ssuccess-only
2025-10-31 00:46:23,781 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-10-31 00:46:23,782 [ scc.merge] INFO Repository: ome/omero-plugins
2025-10-31 00:46:23,782 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-10-31 00:46:23,782 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-10-31 00:46:23,782 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-10-31 00:46:23,782 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-10-31 00:46:23,782 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-10-31 00:46:23,782 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,782 [ scc.merge] INFO
2025-10-31 00:46:23,782 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-10-31 00:46:23,782 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-10-31 00:46:23,782 [ scc.merge] INFO Updating 11d3587..37ea700
2025-10-31 00:46:23,782 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,782 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 174 will-moore 'Skip wells'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Repository: ome/omero-figure
2025-10-31 00:46:23,783 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-10-31 00:46:23,783 [ scc.merge] INFO Updating 9cc36cde..baab5c06
2025-10-31 00:46:23,783 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-10-31 00:46:23,783 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,783 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-10-31 00:46:23,783 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,783 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Repository: ome/omero-gallery
2025-10-31 00:46:23,784 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-10-31 00:46:23,784 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft)
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft)
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-10-31 00:46:23,784 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-10-31 00:46:23,784 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Repository: ome/omero-mapr
2025-10-31 00:46:23,784 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-10-31 00:46:23,784 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,784 [ scc.merge] INFO
2025-10-31 00:46:23,784 [ scc.merge] INFO Repository: ome/omero-metadata
2025-10-31 00:46:23,784 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-10-31 00:46:23,784 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,784 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Repository: ome/omero-parade
2025-10-31 00:46:23,785 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-10-31 00:46:23,785 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-10-31 00:46:23,785 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Repository: ome/omero-rois
2025-10-31 00:46:23,785 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-10-31 00:46:23,785 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Repository: ome/omero-signup
2025-10-31 00:46:23,785 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-10-31 00:46:23,785 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-10-31 00:46:23,785 [ scc.merge] INFO Updating cda3ec6..40b2517
2025-10-31 00:46:23,785 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,785 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container'
2025-10-31 00:46:23,785 [ scc.merge] INFO
2025-10-31 00:46:23,785 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: ome/omero-upload
2025-10-31 00:46:23,786 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-10-31 00:46:23,786 [ scc.merge] INFO Updating deab817..160d894
2025-10-31 00:46:23,786 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-10-31 00:46:23,786 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-10-31 00:46:23,786 [ scc.merge] INFO Updating 8f3c313..00e0207
2025-10-31 00:46:23,786 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-10-31 00:46:23,786 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-10-31 00:46:23,786 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-10-31 00:46:23,786 [ scc.merge] INFO Already up to date.
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-10-31 00:46:23,786 [ scc.merge] INFO
2025-10-31 00:46:23,786 [ scc.merge] INFO Repository: ome/scripts
2025-10-31 00:46:23,786 [ scc.merge] INFO Excluded PRs:
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-10-31 00:46:23,786 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-10-31 00:46:23,787 [ scc.merge] INFO Updating 4b4c755..03b9116
2025-10-31 00:46:23,787 [ scc.merge] INFO Previously merged:
2025-10-31 00:46:23,787 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-10-31 00:46:23,787 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-10-31 00:46:23,787 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-10-31 00:46:23,787 [ scc.merge] INFO
2025-10-31 00:46:23,787 [ scc.merge] INFO Merged PRs:
2025-10-31 00:46:23,787 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-10-31 00:46:23,787 [ scc.merge] INFO
2025-10-31 00:46:23,787 [ scc.merge] INFO Conflicting PRs (not included):
2025-10-31 00:46:23,787 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-10-31 00:46:23,787 [ scc.merge] INFO
2025-10-31 00:46:23,787 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-10-31 00:46:23,787 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-10-31 00:46:23,789 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-10-31 00:46:23,791 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-10-31 00:46:23,793 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-10-31 00:46:23,795 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-10-31 00:46:23,797 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-10-31 00:46:23,799 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-10-31 00:46:23,801 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-10-31 00:46:23,803 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-10-31 00:46:23,805 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-10-31 00:46:23,807 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-10-31 00:46:23,809 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-10-31 00:46:23,811 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-10-31 00:46:23,813 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-10-31 00:46:23,816 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-10-31 00:46:23,818 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-10-31 00:46:23,820 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-10-31 00:46:23,822 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-10-31 00:46:23,824 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-10-31 00:46:23,826 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-10-31 00:46:23,828 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-10-31 00:46:23,830 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-10-31 00:46:23,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-10-31 00:46:23,832 [ scc.git] DEBUG Calling 'git remote'
2025-10-31 00:46:23,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 1e55edc] Update component versions
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[detached HEAD b8304fd] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-10-31 00:47:10,157 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-10-31 00:47:19,399 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-10-31 00:47:21,789 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-31 00:47:26,665 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-10-31 00:48:06,398 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS