Started by upstream project "Trigger" build number 708 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 606 [Pipeline] sh > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.3-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.3 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.16-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.8 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.11.12-py3-none-any.whl.metadata (2.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.3-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.1-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2025.11.12-py3-none-any.whl (159 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.16-py3-none-any.whl (119 kB) Using cached ruamel_yaml_clib-0.2.15-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (777 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.11.12 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.3 future-1.0.0 idna-3.11 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.1 requests-2.32.5 ruamel.yaml-0.18.16 ruamel.yaml.clib-0.2.15 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-11-28 00:28:31,386 [ scc.config] DEBUG Found github.token 2025-11-28 00:28:31,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-11-28 00:28:31,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:32,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:32,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-11-28 00:28:32,405 [ scc.gh] DEBUG 4776 remaining from 5000 (Reset at 01:11 2025-11-28 00:28:32,406 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:32,408 [ scc.git] DEBUG Check current status 2025-11-28 00:28:32,408 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:32,410 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-11-28 00:28:32,410 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:32,456 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-28 00:28:32,458 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-28 00:28:32,462 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-28 00:28:32,465 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-11-28 00:28:32,469 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-11-28 00:28:32,472 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-28 00:28:32,475 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-28 00:28:32,478 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-11-28 00:28:32,482 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-28 00:28:32,484 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-11-28 00:28:32,488 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-28 00:28:32,490 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-28 00:28:32,494 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-28 00:28:32,497 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-28 00:28:32,500 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-11-28 00:28:32,502 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-28 00:28:32,505 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-11-28 00:28:32,507 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-11-28 00:28:32,510 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-28 00:28:32,513 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-28 00:28:32,515 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-28 00:28:32,519 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-11-28 00:28:32,522 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:32,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-11-28 00:28:33,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:33,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:28:34,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:28:34,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:28:34,652 [ scc.git] DEBUG Resetting... 2025-11-28 00:28:34,652 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-11-28 00:28:34,659 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-11-28 00:28:34,659 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-11-28 00:28:34,755 [ scc.git] DEBUG Check current status 2025-11-28 00:28:34,755 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:34,757 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2025-11-28 00:28:34,758 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:34,800 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-28 00:28:34,803 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-28 00:28:34,806 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-28 00:28:34,809 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-11-28 00:28:34,813 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2025-11-28 00:28:34,816 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-28 00:28:34,818 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-28 00:28:34,821 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2025-11-28 00:28:34,824 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-28 00:28:34,827 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-11-28 00:28:34,830 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-28 00:28:34,832 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-28 00:28:34,836 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-28 00:28:34,838 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-28 00:28:34,841 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-11-28 00:28:34,844 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-28 00:28:34,846 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-11-28 00:28:34,848 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-11-28 00:28:34,851 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-28 00:28:34,853 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-28 00:28:34,856 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-28 00:28:34,859 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2025-11-28 00:28:34,860 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-11-28 00:28:34,860 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-11-28 00:28:34,860 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-11-28 00:28:34,860 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-11-28 00:28:34,860 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-11-28 00:28:34,860 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:28:35,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-11-28 00:28:35,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-11-28 00:28:35,702 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:28:35,702 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-28 00:28:36,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-11-28 00:28:36,202 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:28:36,202 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-28 00:28:36,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-11-28 00:28:36,724 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:28:36,724 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-28 00:28:36,724 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:28:36,724 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:28:36,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:28:36,727 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:28:36,729 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:28:36,729 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:28:36,731 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:28:36,734 [ scc.git] DEBUG Already up to date. 2025-11-28 00:28:36,734 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-11-28 00:28:37,002 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-28 00:28:37,002 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-11-28 00:28:37,008 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-11-28 00:28:37,264 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-28 00:28:37,264 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-11-28 00:28:37,270 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-11-28 00:28:37,536 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-28 00:28:37,536 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-11-28 00:28:37,542 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:28:37,542 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:28:37,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:28:37,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-28 00:28:37,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:28:37,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-28 00:28:37,561 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:28:37,563 [ scc.git] DEBUG scripts | 2 +- 2025-11-28 00:28:37,564 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:28:37,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:37,710 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-28 00:28:37,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:28:37,714 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-28 00:28:37,727 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:28:37,729 [ scc.git] DEBUG omero-figure | 2 +- 2025-11-28 00:28:37,729 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:28:38,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:38,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-28 00:28:38,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:28:38,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-28 00:28:38,154 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:28:38,156 [ scc.git] DEBUG omero-iviewer | 2 +- 2025-11-28 00:28:38,156 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:28:38,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:38,539 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:28:38,598 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-11-28 00:28:38,622 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-11-28 00:28:38,636 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-11-28 00:28:38,636 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:28:38,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:28:38,639 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:28:38,713 [ scc.git] DEBUG has no local changes 2025-11-28 00:28:38,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:28:38,778 [ scc.git] DEBUG [detached HEAD 61bbddb] merge master -Dorg -Snone 2025-11-28 00:28:38,779 [ scc.merge] INFO Repository: ome/omero-plugins 2025-11-28 00:28:38,779 [ scc.merge] INFO Already up to date. 2025-11-28 00:28:38,779 [ scc.merge] INFO 2025-11-28 00:28:38,779 [ scc.merge] INFO Merged PRs: 2025-11-28 00:28:38,779 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-28 00:28:38,779 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-28 00:28:38,779 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-28 00:28:38,779 [ scc.merge] INFO 2025-11-28 00:28:38,779 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-11-28 00:28:38,779 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b' Submodule path 'omero-figure': checked out '691a9a60c01bcce1f01f90d528584cb6e68124f9' Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out '40b2517588040d7ae02091fee16e4223681e8e4f' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15' Submodule path 'scripts': checked out '0c7356acacce8767f1317bc04057d5ddf059a2db' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2025-11-28 00:28:45,723 [ scc.config] DEBUG Found github.token 2025-11-28 00:28:45,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-11-28 00:28:45,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:46,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:28:46,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-11-28 00:28:46,717 [ scc.gh] DEBUG 4762 remaining from 5000 (Reset at 01:11 2025-11-28 00:28:46,717 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:46,719 [ scc.git] DEBUG Check current status 2025-11-28 00:28:46,719 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:46,721 [ scc.git] DEBUG 61bbddb merge master -Dorg -Snone 2025-11-28 00:28:46,722 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:46,767 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-28 00:28:46,770 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-28 00:28:46,773 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-28 00:28:46,776 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700) 2025-11-28 00:28:46,783 [ scc.git] DEBUG +691a9a60c01bcce1f01f90d528584cb6e68124f9 omero-figure (v7.2.1-116-g691a9a60) 2025-11-28 00:28:46,786 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-28 00:28:46,789 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-28 00:28:46,792 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8) 2025-11-28 00:28:46,795 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-28 00:28:46,798 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2025-11-28 00:28:46,801 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-28 00:28:46,804 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-28 00:28:46,807 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-28 00:28:46,810 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-28 00:28:46,813 [ scc.git] DEBUG +40b2517588040d7ae02091fee16e4223681e8e4f omero-test-infra (v0.6.3-62-g40b2517) 2025-11-28 00:28:46,816 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-28 00:28:46,818 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2025-11-28 00:28:46,821 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207) 2025-11-28 00:28:46,823 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-28 00:28:46,826 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-28 00:28:46,829 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-28 00:28:46,834 [ scc.git] DEBUG +0c7356acacce8767f1317bc04057d5ddf059a2db scripts (v5.9.1-12-g0c7356a) 2025-11-28 00:28:46,836 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:46,836 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-11-28 00:28:46,838 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2025-11-28 00:28:47,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2025-11-28 00:28:47,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:48,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:28:48,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:28:48,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:28:48,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:28:49,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-11-28 00:28:49,070 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:49,072 [ scc.git] DEBUG Check current status 2025-11-28 00:28:49,072 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:49,074 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2025-11-28 00:28:49,074 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:49,111 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:49,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2025-11-28 00:28:50,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:50,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:28:50,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:28:51,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:28:51,373 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:28:51,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:28:51,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-11-28 00:28:51,412 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:51,414 [ scc.git] DEBUG Check current status 2025-11-28 00:28:51,414 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:51,416 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2025-11-28 00:28:51,416 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:51,454 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:51,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2025-11-28 00:28:52,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:52,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:28:53,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:28:53,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:28:53,742 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:28:53,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:28:53,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-11-28 00:28:53,780 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:53,781 [ scc.git] DEBUG Check current status 2025-11-28 00:28:53,781 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:53,783 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2025-11-28 00:28:53,784 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:53,820 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:54,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2025-11-28 00:28:54,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:55,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:28:55,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:28:56,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:28:56,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:28:56,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:28:56,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-11-28 00:28:56,054 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:56,056 [ scc.git] DEBUG Check current status 2025-11-28 00:28:56,056 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:56,058 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0 2025-11-28 00:28:56,058 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:56,096 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:56,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2025-11-28 00:28:56,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:57,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:28:57,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:28:58,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:28:58,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:28:58,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:28:58,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-11-28 00:28:58,301 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:28:58,303 [ scc.git] DEBUG Check current status 2025-11-28 00:28:58,303 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:28:58,306 [ scc.git] DEBUG 691a9a60 Merge pull request #610 from will-moore/contributing_docs 2025-11-28 00:28:58,306 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:28:58,344 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:28:58,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2025-11-28 00:28:59,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:28:59,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:00,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:00,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:00,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:00,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:00,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-11-28 00:29:00,569 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:00,571 [ scc.git] DEBUG Check current status 2025-11-28 00:29:00,571 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:00,573 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2025-11-28 00:29:00,573 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:00,612 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:01,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2025-11-28 00:29:01,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:02,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:02,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:02,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:02,972 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:03,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:03,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-11-28 00:29:03,009 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:03,011 [ scc.git] DEBUG Check current status 2025-11-28 00:29:03,011 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:03,014 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2025-11-28 00:29:03,014 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:03,050 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:03,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2025-11-28 00:29:03,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:04,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:04,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:05,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:05,193 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:05,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:05,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-11-28 00:29:05,229 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:05,231 [ scc.git] DEBUG Check current status 2025-11-28 00:29:05,231 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:05,233 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action 2025-11-28 00:29:05,233 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:05,271 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:05,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2025-11-28 00:29:06,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:06,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:07,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:07,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:07,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:07,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:07,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-11-28 00:29:07,522 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:07,524 [ scc.git] DEBUG Check current status 2025-11-28 00:29:07,524 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:07,526 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2025-11-28 00:29:07,527 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:07,563 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:08,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2025-11-28 00:29:08,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:08,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:09,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:09,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:09,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:09,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:09,866 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-11-28 00:29:09,866 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:09,868 [ scc.git] DEBUG Check current status 2025-11-28 00:29:09,868 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:09,870 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-11-28 00:29:09,870 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:09,907 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:10,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2025-11-28 00:29:10,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:11,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:11,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:12,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:12,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:12,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:12,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-11-28 00:29:12,120 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:12,122 [ scc.git] DEBUG Check current status 2025-11-28 00:29:12,122 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:12,124 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2025-11-28 00:29:12,125 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:12,163 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:12,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2025-11-28 00:29:13,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:13,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:13,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:14,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:14,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:14,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:14,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-11-28 00:29:14,399 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:14,401 [ scc.git] DEBUG Check current status 2025-11-28 00:29:14,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:14,404 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2025-11-28 00:29:14,404 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:14,440 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:14,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2025-11-28 00:29:15,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:15,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:16,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:16,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:16,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:16,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:16,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-11-28 00:29:16,612 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:16,613 [ scc.git] DEBUG Check current status 2025-11-28 00:29:16,613 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:16,615 [ scc.git] DEBUG bdfeb5e bump sphinx version 2025-11-28 00:29:16,616 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:16,652 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:17,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2025-11-28 00:29:17,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:18,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:18,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:19,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:19,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:19,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:19,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-11-28 00:29:19,227 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:19,230 [ scc.git] DEBUG Check current status 2025-11-28 00:29:19,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:19,232 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2025-11-28 00:29:19,232 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:19,269 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:19,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2025-11-28 00:29:20,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:20,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:21,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:21,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:21,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:21,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:21,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-11-28 00:29:21,656 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:21,658 [ scc.git] DEBUG Check current status 2025-11-28 00:29:21,658 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:21,660 [ scc.git] DEBUG 40b2517 Merge pull request #81 from erickmartins/set-ulimits 2025-11-28 00:29:21,660 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:21,697 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:22,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-11-28 00:29:22,033 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-11-28 00:29:22,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2025-11-28 00:29:22,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:23,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:23,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:24,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:24,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:24,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:24,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-11-28 00:29:24,113 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:24,115 [ scc.git] DEBUG Check current status 2025-11-28 00:29:24,115 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:24,117 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2025-11-28 00:29:24,117 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:24,154 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:24,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2025-11-28 00:29:25,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:25,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:25,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:26,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:26,339 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:26,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:26,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-11-28 00:29:26,376 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:26,378 [ scc.git] DEBUG Check current status 2025-11-28 00:29:26,378 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:26,380 [ scc.git] DEBUG 160d894 Fix display of code 2025-11-28 00:29:26,380 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:26,417 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:26,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2025-11-28 00:29:27,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:27,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:28,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:28,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:28,620 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:28,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:28,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-11-28 00:29:28,656 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:28,658 [ scc.git] DEBUG Check current status 2025-11-28 00:29:28,658 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:28,660 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-11-28 00:29:28,661 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:28,698 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:28,698 [ scc.git] DEBUG Repository configuration: base-branch: main 2025-11-28 00:29:29,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2025-11-28 00:29:29,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:30,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:30,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:31,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:31,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:31,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:31,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-11-28 00:29:31,119 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:31,121 [ scc.git] DEBUG Check current status 2025-11-28 00:29:31,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:31,123 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2025-11-28 00:29:31,123 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:31,160 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:31,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-11-28 00:29:31,533 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-11-28 00:29:31,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2025-11-28 00:29:32,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:32,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:33,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:33,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:33,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:33,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:33,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-11-28 00:29:33,608 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:33,610 [ scc.git] DEBUG Check current status 2025-11-28 00:29:33,610 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:33,612 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2025-11-28 00:29:33,613 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:33,649 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:34,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-11-28 00:29:34,036 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-11-28 00:29:34,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2025-11-28 00:29:34,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:35,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:35,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:36,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:36,132 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:36,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:36,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-11-28 00:29:36,168 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:36,170 [ scc.git] DEBUG Check current status 2025-11-28 00:29:36,170 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:36,172 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-11-28 00:29:36,173 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:36,209 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:36,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2025-11-28 00:29:37,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:37,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:37,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:38,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:38,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:38,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:38,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-11-28 00:29:38,408 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-11-28 00:29:38,410 [ scc.git] DEBUG Check current status 2025-11-28 00:29:38,410 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:38,412 [ scc.git] DEBUG 0c7356a Merge pull request #223 from will-moore/batch_roi_export_big_images 2025-11-28 00:29:38,412 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:38,449 [ scc.config] DEBUG Found remote.origin.url 2025-11-28 00:29:38,449 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-11-28 00:29:38,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-28 00:29:38,805 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-28 00:29:39,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2025-11-28 00:29:39,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-11-28 00:29:40,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-11-28 00:29:40,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-11-28 00:29:40,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-11-28 00:29:40,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:40,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:40,949 [ scc.git] DEBUG Resetting... 2025-11-28 00:29:40,949 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-11-28 00:29:40,955 [ scc.git] DEBUG HEAD is now at 61bbddb merge master -Dorg -Snone 2025-11-28 00:29:40,955 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-11-28 00:29:41,010 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2025-11-28 00:29:41,034 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2025-11-28 00:29:41,053 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2025-11-28 00:29:41,068 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2025-11-28 00:29:41,089 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2025-11-28 00:29:41,101 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2025-11-28 00:29:41,111 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2025-11-28 00:29:41,134 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2025-11-28 00:29:41,137 [ scc.git] DEBUG Check current status 2025-11-28 00:29:41,137 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-11-28 00:29:41,139 [ scc.git] DEBUG 61bbddb merge master -Dorg -Snone 2025-11-28 00:29:41,140 [ scc.git] DEBUG Calling 'git submodule status' 2025-11-28 00:29:41,181 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2025-11-28 00:29:41,184 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2025-11-28 00:29:41,187 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2025-11-28 00:29:41,190 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2025-11-28 00:29:41,194 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2025-11-28 00:29:41,197 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2025-11-28 00:29:41,199 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2025-11-28 00:29:41,203 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2025-11-28 00:29:41,205 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2025-11-28 00:29:41,208 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2025-11-28 00:29:41,211 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2025-11-28 00:29:41,214 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2025-11-28 00:29:41,217 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2025-11-28 00:29:41,220 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2025-11-28 00:29:41,223 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2025-11-28 00:29:41,225 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2025-11-28 00:29:41,227 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2025-11-28 00:29:41,230 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2025-11-28 00:29:41,232 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2025-11-28 00:29:41,235 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2025-11-28 00:29:41,238 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2025-11-28 00:29:41,241 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2025-11-28 00:29:41,242 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-11-28 00:29:41,242 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-11-28 00:29:41,242 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-11-28 00:29:41,242 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-11-28 00:29:41,242 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-11-28 00:29:41,242 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-11-28 00:29:41,242 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:29:41,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2025-11-28 00:29:41,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2025-11-28 00:29:41,942 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:29:42,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-11-28 00:29:43,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:29:43,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2025-11-28 00:29:44,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:29:44,067 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-28 00:29:44,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2025-11-28 00:29:44,593 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:29:45,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-11-28 00:29:45,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:29:46,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2025-11-28 00:29:46,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:29:46,611 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-28 00:29:47,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2025-11-28 00:29:47,098 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:29:47,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-11-28 00:29:48,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:29:48,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2025-11-28 00:29:49,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:29:49,132 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-28 00:29:49,132 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:29:49,132 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:49,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:49,134 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:29:49,136 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:29:49,136 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:29:49,139 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:29:49,141 [ scc.git] DEBUG Already up to date. 2025-11-28 00:29:49,141 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2025-11-28 00:29:49,424 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-28 00:29:49,424 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2025-11-28 00:29:49,430 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2025-11-28 00:29:49,693 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-28 00:29:49,693 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2025-11-28 00:29:49,699 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2025-11-28 00:29:49,961 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2025-11-28 00:29:49,961 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2025-11-28 00:29:49,967 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:29:49,967 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:49,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:49,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-28 00:29:49,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:49,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2025-11-28 00:29:49,976 [ scc.git] DEBUG Already up to date. 2025-11-28 00:29:50,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:29:50,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-28 00:29:50,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:50,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2025-11-28 00:29:50,142 [ scc.git] DEBUG Already up to date. 2025-11-28 00:29:50,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:29:50,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-28 00:29:50,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:50,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2025-11-28 00:29:50,536 [ scc.git] DEBUG Already up to date. 2025-11-28 00:29:50,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:29:50,926 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:29:50,975 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:50,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:50,977 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:29:51,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2025-11-28 00:29:51,357 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:29:51,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-11-28 00:29:51,357 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:51,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:51,360 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:29:51,362 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:29:51,362 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:29:51,364 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:29:51,367 [ scc.git] DEBUG Already up to date. 2025-11-28 00:29:51,367 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:29:51,367 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:51,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:51,369 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:29:51,406 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:51,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:51,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:51,443 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:29:51,446 [ scc.git] DEBUG has no local changes 2025-11-28 00:29:51,447 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:29:51,452 [ scc.git] DEBUG [detached HEAD 2498420] merge master -Dorg -Ssuccess-only 2025-11-28 00:29:51,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:51,452 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:29:51,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2025-11-28 00:29:52,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2025-11-28 00:29:52,356 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:29:52,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-11-28 00:29:53,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:29:53,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:29:54,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2025-11-28 00:29:55,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:29:55,044 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:29:55,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2025-11-28 00:29:56,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2025-11-28 00:29:56,022 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:29:56,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-11-28 00:29:56,022 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:56,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:56,025 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:29:56,027 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:29:56,027 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:29:56,030 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:29:56,032 [ scc.git] DEBUG Already up to date. 2025-11-28 00:29:56,032 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2025-11-28 00:29:56,304 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2025-11-28 00:29:56,304 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2025-11-28 00:29:56,308 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:29:56,308 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:56,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:56,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-11-28 00:29:56,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:56,315 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2025-11-28 00:29:56,321 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:29:56,323 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:29:56,323 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:29:56,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:29:56,471 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:29:56,507 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:29:56,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:29:56,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:29:56,543 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:29:56,546 [ scc.git] DEBUG has no local changes 2025-11-28 00:29:56,546 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:29:56,552 [ scc.git] DEBUG [detached HEAD 51a18f8] merge master -Dorg -Ssuccess-only 2025-11-28 00:29:56,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:29:56,552 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:29:57,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2025-11-28 00:29:57,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None 2025-11-28 00:29:57,538 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:29:58,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-11-28 00:29:58,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:29:59,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:29:59,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None 2025-11-28 00:30:00,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:00,016 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:30:00,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None 2025-11-28 00:30:01,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-11-28 00:30:01,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:02,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None 2025-11-28 00:30:02,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:02,472 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names' 2025-11-28 00:30:02,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None 2025-11-28 00:30:03,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None 2025-11-28 00:30:04,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-11-28 00:30:04,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:05,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:05,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None 2025-11-28 00:30:06,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:06,021 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands' 2025-11-28 00:30:06,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2025-11-28 00:30:07,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2025-11-28 00:30:07,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-11-28 00:30:08,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:08,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:09,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2025-11-28 00:30:09,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:09,656 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2025-11-28 00:30:10,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2025-11-28 00:30:10,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2025-11-28 00:30:10,712 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:30:10,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-11-28 00:30:10,712 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:10,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:10,715 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:30:10,717 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:30:10,717 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:30:10,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:30:10,723 [ scc.git] DEBUG Already up to date. 2025-11-28 00:30:10,723 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2025-11-28 00:30:10,999 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-28 00:30:10,999 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2025-11-28 00:30:11,004 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-11-28 00:30:11,261 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-28 00:30:11,261 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-11-28 00:30:11,265 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head' 2025-11-28 00:30:11,538 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-28 00:30:11,538 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD 2025-11-28 00:30:11,542 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head' 2025-11-28 00:30:11,802 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2025-11-28 00:30:11,802 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD 2025-11-28 00:30:11,806 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:30:11,806 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:11,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:11,808 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2025-11-28 00:30:11,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:11,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2025-11-28 00:30:11,820 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:30:11,823 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2025-11-28 00:30:11,823 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2025-11-28 00:30:11,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:11,968 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-11-28 00:30:11,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:11,974 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22' 2025-11-28 00:30:11,981 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-11-28 00:30:11,982 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:30:11,985 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++-------- 2025-11-28 00:30:11,985 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-) 2025-11-28 00:30:12,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:12,369 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-11-28 00:30:12,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:12,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6' 2025-11-28 00:30:12,383 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2025-11-28 00:30:12,383 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:30:12,386 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++------- 2025-11-28 00:30:12,386 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-) 2025-11-28 00:30:12,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:12,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-11-28 00:30:12,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:12,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc' 2025-11-28 00:30:12,810 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:30:12,812 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:30:12,812 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:30:13,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:13,205 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:30:13,241 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:13,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:13,243 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:30:13,277 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:30:13,280 [ scc.git] DEBUG has no local changes 2025-11-28 00:30:13,280 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:30:13,330 [ scc.git] DEBUG [detached HEAD f4e251a] merge master -Dorg -Ssuccess-only 2025-11-28 00:30:13,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:30:13,330 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:30:13,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2025-11-28 00:30:14,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2025-11-28 00:30:14,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2025-11-28 00:30:15,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-11-28 00:30:15,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:16,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:16,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-11-28 00:30:17,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:17,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2025-11-28 00:30:18,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2025-11-28 00:30:18,380 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-11-28 00:30:18,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2025-11-28 00:30:19,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2025-11-28 00:30:19,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-11-28 00:30:20,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:20,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:21,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-11-28 00:30:21,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:22,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None 2025-11-28 00:30:22,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None 2025-11-28 00:30:22,752 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import' 2025-11-28 00:30:23,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2025-11-28 00:30:23,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2025-11-28 00:30:24,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-11-28 00:30:24,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:25,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:25,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-11-28 00:30:26,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:26,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2025-11-28 00:30:27,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2025-11-28 00:30:27,128 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-11-28 00:30:27,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2025-11-28 00:30:28,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2025-11-28 00:30:28,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-11-28 00:30:29,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:29,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:30,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-11-28 00:30:30,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:31,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2025-11-28 00:30:31,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2025-11-28 00:30:31,627 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2025-11-28 00:30:32,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2025-11-28 00:30:32,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2025-11-28 00:30:33,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f HTTP/1.1" 200 None 2025-11-28 00:30:33,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:34,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/34b94cfddfc81989bb9e3fcd54cfded2ae58cf9f/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:30:34,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2025-11-28 00:30:35,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2025-11-28 00:30:35,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2025-11-28 00:30:35,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2025-11-28 00:30:36,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2025-11-28 00:30:36,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2025-11-28 00:30:37,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2025-11-28 00:30:37,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2025-11-28 00:30:38,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2025-11-28 00:30:38,465 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:30:38,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-11-28 00:30:38,465 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:38,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:38,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:30:38,470 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:30:38,470 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:30:38,473 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:30:38,485 [ scc.git] DEBUG Updating 11d3587..37ea700 2025-11-28 00:30:39,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2025-11-28 00:30:39,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2025-11-28 00:30:40,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2025-11-28 00:30:41,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2025-11-28 00:30:41,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2025-11-28 00:30:42,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2025-11-28 00:30:43,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2025-11-28 00:30:44,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2025-11-28 00:30:44,285 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2025-11-28 00:30:44,553 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-28 00:30:44,553 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2025-11-28 00:30:44,557 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2025-11-28 00:30:44,817 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-28 00:30:44,817 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2025-11-28 00:30:44,822 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head' 2025-11-28 00:30:45,079 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-28 00:30:45,079 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD 2025-11-28 00:30:45,083 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2025-11-28 00:30:45,341 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2025-11-28 00:30:45,341 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2025-11-28 00:30:45,346 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:30:45,346 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:45,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:45,348 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-11-28 00:30:45,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:45,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2025-11-28 00:30:45,363 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:30:45,367 [ scc.git] DEBUG README.rst | 14 ++ 2025-11-28 00:30:45,367 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2025-11-28 00:30:45,367 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2025-11-28 00:30:45,367 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2025-11-28 00:30:45,367 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2025-11-28 00:30:45,367 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2025-11-28 00:30:45,367 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2025-11-28 00:30:45,367 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2025-11-28 00:30:45,367 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2025-11-28 00:30:45,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:45,531 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-11-28 00:30:45,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:45,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-11-28 00:30:45,546 [ scc.git] DEBUG Auto-merging CHANGELOG.md 2025-11-28 00:30:45,546 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md 2025-11-28 00:30:45,546 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2025-11-28 00:30:45,546 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2025-11-28 00:30:45,546 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2025-11-28 00:30:45,546 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2025-11-28 00:30:45,547 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:30:45,547 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:30:45,549 [ scc.git] DEBUG Calling 'git reset --hard 69f76603bebb27fffb8e7208934b107b4c8fcfa4' 2025-11-28 00:30:45,554 [ scc.git] DEBUG HEAD is now at 69f7660 merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2025-11-28 00:30:45,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:45,924 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769' 2025-11-28 00:30:45,927 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-11-28 00:30:45,930 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2025-11-28 00:30:45,932 [ scc.config] DEBUG Found github.token 2025-11-28 00:30:45,932 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2025-11-28 00:30:45,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-11-28 00:30:45,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:45,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d' 2025-11-28 00:30:45,947 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-11-28 00:30:45,948 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:30:45,951 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 + 2025-11-28 00:30:45,951 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++ 2025-11-28 00:30:45,951 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++ 2025-11-28 00:30:45,951 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++ 2025-11-28 00:30:45,951 [ scc.git] DEBUG 4 files changed, 226 insertions(+) 2025-11-28 00:30:45,951 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py 2025-11-28 00:30:46,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:46,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-11-28 00:30:46,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:46,333 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-11-28 00:30:46,342 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2025-11-28 00:30:46,342 [ scc.git] DEBUG Auto-merging src/omero_zarr/import_labels.py 2025-11-28 00:30:46,342 [ scc.git] DEBUG CONFLICT (add/add): Merge conflict in src/omero_zarr/import_labels.py 2025-11-28 00:30:46,342 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2025-11-28 00:30:46,342 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:30:46,342 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:30:46,345 [ scc.git] DEBUG Calling 'git reset --hard 58383ec9be1c038abd7267605969f259ea5d175e' 2025-11-28 00:30:46,349 [ scc.git] DEBUG HEAD is now at 58383ec merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) 2025-11-28 00:30:46,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:30:46,718 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2025-11-28 00:30:46,721 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..37ea7000309b4f8b87c5122c138fb59b17ecf86b' 2025-11-28 00:30:46,724 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #181 will-moore 'Add labels support for import' - src/omero_zarr/import_labels.py --conflicts 2025-11-28 00:30:46,726 [ scc.config] DEBUG Found github.token 2025-11-28 00:30:46,726 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2025-11-28 00:30:46,726 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:30:46,764 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:46,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:46,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:30:46,800 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:30:46,803 [ scc.git] DEBUG has no local changes 2025-11-28 00:30:46,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:30:46,809 [ scc.git] DEBUG [detached HEAD 0787044] merge master -Dorg -Ssuccess-only 2025-11-28 00:30:46,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:30:46,809 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:30:47,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2025-11-28 00:30:47,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/647 HTTP/1.1" 200 None 2025-11-28 00:30:48,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643 HTTP/1.1" 200 None 2025-11-28 00:30:48,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/643/comments HTTP/1.1" 200 None 2025-11-28 00:30:48,696 [ scc.repo] DEBUG # ... Include label: include 2025-11-28 00:30:49,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5 HTTP/1.1" 200 None 2025-11-28 00:30:49,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:50,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c1ef89b420677b483d223fc7ec13c116e9f0c5f5 HTTP/1.1" 200 None 2025-11-28 00:30:50,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c1ef89b420677b483d223fc7ec13c116e9f0c5f5?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:50,870 [ scc.repo] DEBUG - PR 643 Rdornier 'Shape scaling' 2025-11-28 00:30:51,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2025-11-28 00:30:51,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2025-11-28 00:30:52,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None 2025-11-28 00:30:52,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None 2025-11-28 00:30:52,848 [ scc.repo] DEBUG # ... Include label: include 2025-11-28 00:30:53,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None 2025-11-28 00:30:53,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:54,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8a77378453ff0c94e6a83bd3146342654333f5e0 HTTP/1.1" 200 None 2025-11-28 00:30:55,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8a77378453ff0c94e6a83bd3146342654333f5e0?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:55,022 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position' 2025-11-28 00:30:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None 2025-11-28 00:30:55,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2025-11-28 00:30:56,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2025-11-28 00:30:56,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/600/comments?page=2 HTTP/1.1" 200 None 2025-11-28 00:30:56,980 [ scc.repo] DEBUG # ... Include label: include 2025-11-28 00:30:57,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb HTTP/1.1" 200 None 2025-11-28 00:30:58,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:30:58,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb HTTP/1.1" 200 None 2025-11-28 00:30:59,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:30:59,104 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois' 2025-11-28 00:30:59,104 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:30:59,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-11-28 00:30:59,105 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:30:59,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:30:59,108 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:30:59,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:30:59,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:30:59,115 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:30:59,139 [ scc.git] DEBUG Updating 9cc36cde..691a9a60 2025-11-28 00:30:59,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2025-11-28 00:31:00,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2025-11-28 00:31:00,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2025-11-28 00:31:02,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2025-11-28 00:31:02,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2025-11-28 00:31:03,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2025-11-28 00:31:04,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2025-11-28 00:31:05,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2025-11-28 00:31:05,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2025-11-28 00:31:06,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2025-11-28 00:31:06,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2025-11-28 00:31:07,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2025-11-28 00:31:07,672 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head' 2025-11-28 00:31:07,976 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-11-28 00:31:07,976 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD 2025-11-28 00:31:07,981 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head' 2025-11-28 00:31:08,244 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-11-28 00:31:08,244 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD 2025-11-28 00:31:08,249 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head' 2025-11-28 00:31:08,518 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2025-11-28 00:31:08,518 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD 2025-11-28 00:31:08,523 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:31:08,523 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:08,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:08,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb' 2025-11-28 00:31:08,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:08,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) d9eeab01dd247af3abeaa39f2f60ee65fcb35ddb' 2025-11-28 00:31:08,556 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:08,565 [ scc.git] DEBUG .gitignore | 2 + 2025-11-28 00:31:08,565 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 347 ++++++++- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/css/figure.css | 18 +- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/index.html | 44 +- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 213 +++++- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shape_editor/line.js | 220 +++++- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shape_editor/point.js | 208 +++++- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 212 +++++- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shape_editor/rect.js | 217 +++++- 2025-11-28 00:31:08,565 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 427 ++++++++++- 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/js/shape_editor/text.js | 812 +++++++++++++++++++++ 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/js/views/right_panel_view.js | 125 +++- 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +- 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 200 ++++- 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +- 2025-11-28 00:31:08,566 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +- 2025-11-28 00:31:08,567 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++ 2025-11-28 00:31:08,567 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++--- 2025-11-28 00:31:08,567 [ scc.git] DEBUG 22 files changed, 3441 insertions(+), 235 deletions(-) 2025-11-28 00:31:08,567 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png 2025-11-28 00:31:08,567 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js 2025-11-28 00:31:08,567 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html 2025-11-28 00:31:08,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:08,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-11-28 00:31:08,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:08,736 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) 8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-11-28 00:31:08,762 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2025-11-28 00:31:08,762 [ scc.git] DEBUG Auto-merging src/css/figure.css 2025-11-28 00:31:08,762 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2025-11-28 00:31:08,762 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html 2025-11-28 00:31:08,762 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html 2025-11-28 00:31:08,762 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:31:08,763 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:31:08,768 [ scc.git] DEBUG Calling 'git reset --hard 998753ab5c5d79993d6b2aa7b0cdcf9180117879' 2025-11-28 00:31:08,779 [ scc.git] DEBUG HEAD is now at 998753ab merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 2025-11-28 00:31:09,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:09,136 [ scc.git] DEBUG Calling 'git merge-base 691a9a60c01bcce1f01f90d528584cb6e68124f9 8a77378453ff0c94e6a83bd3146342654333f5e0' 2025-11-28 00:31:09,141 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..691a9a60c01bcce1f01f90d528584cb6e68124f9' 2025-11-28 00:31:09,144 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/templates/scalebar_form.template.html --conflicts 2025-11-28 00:31:09,146 [ scc.config] DEBUG Found github.token 2025-11-28 00:31:09,146 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts. 2025-11-28 00:31:09,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c1ef89b420677b483d223fc7ec13c116e9f0c5f5' 2025-11-28 00:31:09,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:09,156 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Shape scaling) c1ef89b420677b483d223fc7ec13c116e9f0c5f5' 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/shape_editor/line.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/shape_editor/point.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/shape_editor/polygon.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/shape_manager.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2025-11-28 00:31:09,178 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:31:09,178 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:31:09,182 [ scc.git] DEBUG Calling 'git reset --hard 998753ab5c5d79993d6b2aa7b0cdcf9180117879' 2025-11-28 00:31:09,187 [ scc.git] DEBUG HEAD is now at 998753ab merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 2025-11-28 00:31:09,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:09,525 [ scc.git] DEBUG Calling 'git merge-base 691a9a60c01bcce1f01f90d528584cb6e68124f9 c1ef89b420677b483d223fc7ec13c116e9f0c5f5' 2025-11-28 00:31:09,530 [ scc.git] DEBUG Calling 'git diff --name-only 691a9a60c01bcce1f01f90d528584cb6e68124f9..691a9a60c01bcce1f01f90d528584cb6e68124f9' 2025-11-28 00:31:09,533 [ scc.git] INFO - PR 643 Rdornier 'Shape scaling' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #600 Rdornier 'Label on rois' - src/js/shape_editor/shape_manager.js - src/js/shape_editor/rect.js --conflicts 2025-11-28 00:31:09,535 [ scc.config] DEBUG Found github.token 2025-11-28 00:31:09,535 [ scc.git] DEBUG Not adding comment to issue #643, already --conflicts. 2025-11-28 00:31:09,535 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:31:09,571 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:09,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:09,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:31:09,607 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:31:09,612 [ scc.git] DEBUG has no local changes 2025-11-28 00:31:09,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..691a9a60 Previously merged: - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:31:09,621 [ scc.git] DEBUG [detached HEAD 9e7f6863] merge master -Dorg -Ssuccess-only 2025-11-28 00:31:09,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:31:09,621 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:31:10,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2025-11-28 00:31:10,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2025-11-28 00:31:10,562 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:11,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-11-28 00:31:11,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:12,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:12,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2025-11-28 00:31:13,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:13,247 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:31:13,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2025-11-28 00:31:14,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2025-11-28 00:31:14,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-11-28 00:31:15,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:15,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2025-11-28 00:31:16,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:16,400 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2025-11-28 00:31:16,400 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:31:16,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-11-28 00:31:16,400 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:16,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:16,403 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:31:16,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:31:16,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:31:16,407 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:31:16,410 [ scc.git] DEBUG Already up to date. 2025-11-28 00:31:16,410 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2025-11-28 00:31:16,678 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-11-28 00:31:16,678 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2025-11-28 00:31:16,682 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2025-11-28 00:31:16,940 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2025-11-28 00:31:16,940 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2025-11-28 00:31:16,944 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:31:16,944 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:16,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:16,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-11-28 00:31:16,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:16,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2025-11-28 00:31:16,958 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2025-11-28 00:31:16,958 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:16,961 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2025-11-28 00:31:16,961 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-11-28 00:31:17,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:17,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-11-28 00:31:17,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:17,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2025-11-28 00:31:17,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:17,149 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:31:17,149 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:31:17,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:17,549 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:31:17,585 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:17,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:17,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:31:17,621 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:31:17,624 [ scc.git] DEBUG has no local changes 2025-11-28 00:31:17,624 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:31:17,629 [ scc.git] DEBUG [detached HEAD 26ba4dc] merge master -Dorg -Ssuccess-only 2025-11-28 00:31:17,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:31:17,630 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:31:18,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2025-11-28 00:31:18,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2025-11-28 00:31:19,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2025-11-28 00:31:19,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2025-11-28 00:31:19,571 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:20,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-11-28 00:31:20,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:21,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:21,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2025-11-28 00:31:22,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:22,015 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-11-28 00:31:22,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2025-11-28 00:31:22,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2025-11-28 00:31:23,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2025-11-28 00:31:23,426 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:23,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-11-28 00:31:24,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:24,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:25,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2025-11-28 00:31:26,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:26,062 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-11-28 00:31:26,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2025-11-28 00:31:26,527 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:27,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-11-28 00:31:27,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:28,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:28,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2025-11-28 00:31:29,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:29,330 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-11-28 00:31:29,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2025-11-28 00:31:29,826 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:30,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-11-28 00:31:30,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:31,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:31,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2025-11-28 00:31:32,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:32,397 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-11-28 00:31:32,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2025-11-28 00:31:33,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2025-11-28 00:31:33,353 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:33,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-11-28 00:31:34,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:34,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:35,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2025-11-28 00:31:35,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:35,764 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-11-28 00:31:36,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2025-11-28 00:31:36,488 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:37,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-11-28 00:31:37,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:38,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:38,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2025-11-28 00:31:39,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:39,155 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-11-28 00:31:39,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2025-11-28 00:31:39,773 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:40,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-11-28 00:31:40,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:41,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:41,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2025-11-28 00:31:42,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:42,317 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-11-28 00:31:42,318 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:31:42,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-11-28 00:31:42,318 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:42,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:42,321 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:31:42,323 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:31:42,323 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:31:42,326 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:31:42,328 [ scc.git] DEBUG Already up to date. 2025-11-28 00:31:42,328 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2025-11-28 00:31:42,606 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:42,606 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2025-11-28 00:31:42,610 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2025-11-28 00:31:42,877 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:42,877 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2025-11-28 00:31:42,881 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2025-11-28 00:31:43,163 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:43,163 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2025-11-28 00:31:43,168 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2025-11-28 00:31:43,422 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:43,422 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2025-11-28 00:31:43,426 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2025-11-28 00:31:43,685 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:43,685 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2025-11-28 00:31:43,688 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2025-11-28 00:31:43,953 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:43,953 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2025-11-28 00:31:43,957 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2025-11-28 00:31:44,217 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2025-11-28 00:31:44,217 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2025-11-28 00:31:44,221 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:31:44,221 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:44,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:44,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-11-28 00:31:44,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:44,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2025-11-28 00:31:44,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:44,241 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2025-11-28 00:31:44,241 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2025-11-28 00:31:44,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:44,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-11-28 00:31:44,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:44,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2025-11-28 00:31:44,442 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:31:44,442 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:44,447 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2025-11-28 00:31:44,447 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2025-11-28 00:31:44,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:44,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-11-28 00:31:44,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:44,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-11-28 00:31:44,834 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:31:44,834 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-28 00:31:44,835 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:31:44,835 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:31:44,837 [ scc.git] DEBUG Calling 'git reset --hard eb43585f05e4b30346be6c59b7c79e8b93e3ee8e' 2025-11-28 00:31:44,841 [ scc.git] DEBUG HEAD is now at eb43585 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2025-11-28 00:31:45,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:45,205 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2025-11-28 00:31:45,208 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-11-28 00:31:45,211 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2025-11-28 00:31:45,213 [ scc.config] DEBUG Found github.token 2025-11-28 00:31:45,213 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2025-11-28 00:31:45,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-11-28 00:31:45,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:45,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2025-11-28 00:31:45,232 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:31:45,233 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:45,237 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2025-11-28 00:31:45,237 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2025-11-28 00:31:45,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:45,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-11-28 00:31:45,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:45,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2025-11-28 00:31:45,613 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:31:45,614 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:31:45,619 [ scc.git] DEBUG package-lock.json | 6 +++--- 2025-11-28 00:31:45,619 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2025-11-28 00:31:45,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:45,991 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-11-28 00:31:45,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:45,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-11-28 00:31:46,011 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:31:46,011 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-28 00:31:46,011 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:31:46,011 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:31:46,013 [ scc.git] DEBUG Calling 'git reset --hard 3140ed383b149f84c13c22df3a3df6d45a9f70a6' 2025-11-28 00:31:46,018 [ scc.git] DEBUG HEAD is now at 3140ed3 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-11-28 00:31:46,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:46,400 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2025-11-28 00:31:46,402 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-11-28 00:31:46,405 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2025-11-28 00:31:46,407 [ scc.config] DEBUG Found github.token 2025-11-28 00:31:46,407 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2025-11-28 00:31:46,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-11-28 00:31:46,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:46,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-11-28 00:31:46,430 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:31:46,430 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-28 00:31:46,430 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:31:46,430 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:31:46,432 [ scc.git] DEBUG Calling 'git reset --hard 3140ed383b149f84c13c22df3a3df6d45a9f70a6' 2025-11-28 00:31:46,436 [ scc.git] DEBUG HEAD is now at 3140ed3 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2025-11-28 00:31:46,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:31:46,788 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2025-11-28 00:31:46,790 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2025-11-28 00:31:46,793 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2025-11-28 00:31:46,795 [ scc.config] DEBUG Found github.token 2025-11-28 00:31:46,795 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2025-11-28 00:31:46,795 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:31:46,831 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:31:46,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:31:46,833 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:31:46,868 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:31:46,872 [ scc.git] DEBUG has no local changes 2025-11-28 00:31:46,872 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:31:46,878 [ scc.git] DEBUG [detached HEAD 6d8fbde] merge master -Dorg -Ssuccess-only 2025-11-28 00:31:46,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:31:46,879 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:31:47,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2025-11-28 00:31:47,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2025-11-28 00:31:48,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2025-11-28 00:31:48,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2025-11-28 00:31:49,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2025-11-28 00:31:49,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2025-11-28 00:31:49,928 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:50,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-11-28 00:31:51,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:51,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:52,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2025-11-28 00:31:52,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:52,449 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-11-28 00:31:52,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2025-11-28 00:31:52,963 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:31:53,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-11-28 00:31:54,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:54,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:31:55,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2025-11-28 00:31:55,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:55,436 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-11-28 00:31:56,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2025-11-28 00:31:56,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2025-11-28 00:31:57,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2025-11-28 00:31:57,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2025-11-28 00:31:57,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-11-28 00:31:58,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:31:58,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2025-11-28 00:31:59,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:31:59,371 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2025-11-28 00:31:59,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2025-11-28 00:32:00,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2025-11-28 00:32:00,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-11-28 00:32:01,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:01,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2025-11-28 00:32:02,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:02,281 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2025-11-28 00:32:02,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2025-11-28 00:32:03,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2025-11-28 00:32:03,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-11-28 00:32:04,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:04,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2025-11-28 00:32:05,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:05,042 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2025-11-28 00:32:05,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2025-11-28 00:32:05,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2025-11-28 00:32:06,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2025-11-28 00:32:06,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:07,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:07,492 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:32:07,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-11-28 00:32:07,492 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:07,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:07,495 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:32:07,497 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:32:07,497 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:32:07,499 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:32:07,506 [ scc.git] DEBUG Updating 7a798ce..bb94cf8 2025-11-28 00:32:08,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2025-11-28 00:32:08,152 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2025-11-28 00:32:08,447 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-28 00:32:08,447 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2025-11-28 00:32:08,451 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2025-11-28 00:32:08,713 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-28 00:32:08,713 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2025-11-28 00:32:08,718 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2025-11-28 00:32:08,977 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-28 00:32:08,977 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2025-11-28 00:32:08,981 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2025-11-28 00:32:09,235 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-28 00:32:09,236 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2025-11-28 00:32:09,239 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2025-11-28 00:32:09,496 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2025-11-28 00:32:09,496 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2025-11-28 00:32:09,499 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:32:09,499 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:09,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:09,502 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-11-28 00:32:09,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:09,508 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2025-11-28 00:32:09,519 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2025-11-28 00:32:09,519 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2025-11-28 00:32:09,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:09,524 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2025-11-28 00:32:09,524 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2025-11-28 00:32:09,524 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2025-11-28 00:32:09,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:09,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2025-11-28 00:32:09,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:09,677 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2025-11-28 00:32:09,694 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2025-11-28 00:32:09,694 [ scc.git] DEBUG Auto-merging src/app/context.js 2025-11-28 00:32:09,694 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2025-11-28 00:32:09,694 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2025-11-28 00:32:09,694 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:09,699 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2025-11-28 00:32:09,699 [ scc.git] DEBUG src/app/context.js | 6 +- 2025-11-28 00:32:09,699 [ scc.git] DEBUG src/app/header.html | 5 + 2025-11-28 00:32:09,699 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2025-11-28 00:32:09,699 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2025-11-28 00:32:09,699 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2025-11-28 00:32:09,699 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2025-11-28 00:32:09,699 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2025-11-28 00:32:10,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:10,073 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2025-11-28 00:32:10,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:10,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2025-11-28 00:32:10,091 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2025-11-28 00:32:10,092 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:10,095 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2025-11-28 00:32:10,095 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2025-11-28 00:32:10,095 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2025-11-28 00:32:10,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:10,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-11-28 00:32:10,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:10,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2025-11-28 00:32:10,501 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:10,511 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2025-11-28 00:32:10,511 [ scc.git] DEBUG package.json | 2 +- 2025-11-28 00:32:10,511 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2025-11-28 00:32:10,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:10,884 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-11-28 00:32:10,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:10,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-11-28 00:32:10,928 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:32:10,928 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2025-11-28 00:32:10,928 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:32:10,928 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:32:10,931 [ scc.git] DEBUG Calling 'git reset --hard 5933dc68f9ef4e392865b776db02e25c2cb4c302' 2025-11-28 00:32:10,938 [ scc.git] DEBUG HEAD is now at 5933dc6 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2025-11-28 00:32:11,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:11,293 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4' 2025-11-28 00:32:11,296 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4' 2025-11-28 00:32:11,299 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2025-11-28 00:32:11,301 [ scc.config] DEBUG Found github.token 2025-11-28 00:32:11,301 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2025-11-28 00:32:11,301 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:32:11,338 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:11,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:11,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:32:11,377 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:32:11,383 [ scc.git] DEBUG has no local changes 2025-11-28 00:32:11,383 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:32:11,389 [ scc.git] DEBUG [detached HEAD f1a9520] merge master -Dorg -Ssuccess-only 2025-11-28 00:32:11,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:32:11,389 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:32:11,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2025-11-28 00:32:12,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2025-11-28 00:32:12,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2025-11-28 00:32:12,801 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:32:13,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-11-28 00:32:13,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:14,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:14,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2025-11-28 00:32:15,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:15,421 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:32:15,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2025-11-28 00:32:16,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-11-28 00:32:16,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:17,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2025-11-28 00:32:17,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:17,820 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:32:18,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2025-11-28 00:32:18,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2025-11-28 00:32:19,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-11-28 00:32:19,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:20,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2025-11-28 00:32:20,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:20,701 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2025-11-28 00:32:20,701 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:32:20,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-11-28 00:32:20,702 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:20,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:20,704 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:32:20,706 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:32:20,706 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:32:20,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:32:20,711 [ scc.git] DEBUG Already up to date. 2025-11-28 00:32:20,711 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2025-11-28 00:32:20,989 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-11-28 00:32:20,990 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2025-11-28 00:32:20,993 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2025-11-28 00:32:21,253 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-11-28 00:32:21,253 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2025-11-28 00:32:21,257 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2025-11-28 00:32:21,507 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2025-11-28 00:32:21,507 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2025-11-28 00:32:21,511 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:32:21,511 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:21,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:21,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-11-28 00:32:21,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:21,519 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2025-11-28 00:32:21,526 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:21,529 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2025-11-28 00:32:21,529 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2025-11-28 00:32:21,529 [ scc.git] DEBUG requirements.txt | 2 +- 2025-11-28 00:32:21,529 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2025-11-28 00:32:21,529 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2025-11-28 00:32:21,529 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2025-11-28 00:32:21,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:21,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-11-28 00:32:21,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:21,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2025-11-28 00:32:21,881 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:21,883 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:32:21,883 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:32:22,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:22,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-11-28 00:32:22,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:22,314 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-11-28 00:32:22,322 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2025-11-28 00:32:22,322 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2025-11-28 00:32:22,322 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:32:22,322 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:32:22,325 [ scc.git] DEBUG Calling 'git reset --hard 333ee10a53f482a91232d08edc86ae77baf05051' 2025-11-28 00:32:22,328 [ scc.git] DEBUG HEAD is now at 333ee10 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2025-11-28 00:32:22,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:22,715 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2025-11-28 00:32:22,718 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2025-11-28 00:32:22,720 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2025-11-28 00:32:22,722 [ scc.config] DEBUG Found github.token 2025-11-28 00:32:22,722 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2025-11-28 00:32:22,722 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:32:22,759 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:22,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:22,761 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:32:22,797 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:32:22,800 [ scc.git] DEBUG has no local changes 2025-11-28 00:32:22,800 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:32:22,805 [ scc.git] DEBUG [detached HEAD c1cc149] merge master -Dorg -Ssuccess-only 2025-11-28 00:32:22,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:32:22,806 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:32:23,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2025-11-28 00:32:23,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2025-11-28 00:32:24,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2025-11-28 00:32:24,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-11-28 00:32:25,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2025-11-28 00:32:26,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:26,183 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-11-28 00:32:26,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2025-11-28 00:32:27,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2025-11-28 00:32:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-11-28 00:32:28,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:28,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2025-11-28 00:32:28,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:28,989 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-11-28 00:32:28,989 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:32:28,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-11-28 00:32:28,989 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:28,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:28,992 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:32:28,994 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:32:28,994 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:32:28,997 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:32:29,003 [ scc.git] DEBUG Updating 3cd120c..55060a2 2025-11-28 00:32:29,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2025-11-28 00:32:29,701 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2025-11-28 00:32:29,977 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-11-28 00:32:29,977 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2025-11-28 00:32:29,980 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2025-11-28 00:32:30,241 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2025-11-28 00:32:30,241 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2025-11-28 00:32:30,245 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:32:30,245 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:30,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:30,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-11-28 00:32:30,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:30,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-11-28 00:32:30,265 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2025-11-28 00:32:30,265 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2025-11-28 00:32:30,265 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-11-28 00:32:30,265 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-11-28 00:32:30,265 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:32:30,266 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:32:30,268 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-28 00:32:30,272 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-11-28 00:32:30,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:30,426 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2025-11-28 00:32:30,430 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-28 00:32:30,433 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2025-11-28 00:32:30,435 [ scc.config] DEBUG Found github.token 2025-11-28 00:32:30,435 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2025-11-28 00:32:30,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2025-11-28 00:32:30,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:30,440 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2025-11-28 00:32:30,454 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2025-11-28 00:32:30,454 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2025-11-28 00:32:30,454 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2025-11-28 00:32:30,454 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:32:30,454 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:32:30,458 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-28 00:32:30,463 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2025-11-28 00:32:30,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:30,826 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2025-11-28 00:32:30,830 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2025-11-28 00:32:30,833 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2025-11-28 00:32:30,835 [ scc.config] DEBUG Found github.token 2025-11-28 00:32:30,835 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2025-11-28 00:32:30,835 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:32:30,872 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:30,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:30,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:32:30,908 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:32:30,912 [ scc.git] DEBUG has no local changes 2025-11-28 00:32:30,912 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:32:30,918 [ scc.git] DEBUG [detached HEAD 00cc033] merge master -Dorg -Ssuccess-only 2025-11-28 00:32:30,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:32:30,919 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:32:31,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2025-11-28 00:32:31,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2025-11-28 00:32:32,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-11-28 00:32:32,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:33,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:34,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2025-11-28 00:32:34,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:34,595 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:32:35,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2025-11-28 00:32:35,079 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:32:35,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-11-28 00:32:36,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:36,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:37,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2025-11-28 00:32:37,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:37,579 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-11-28 00:32:38,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2025-11-28 00:32:38,085 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:32:38,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-11-28 00:32:39,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:39,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:40,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2025-11-28 00:32:40,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:40,607 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-11-28 00:32:41,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2025-11-28 00:32:41,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2025-11-28 00:32:42,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2025-11-28 00:32:42,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2025-11-28 00:32:42,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2025-11-28 00:32:43,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2025-11-28 00:32:43,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2025-11-28 00:32:43,964 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:32:43,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-11-28 00:32:43,965 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:43,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:43,967 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:32:43,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:32:43,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:32:43,972 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:32:43,975 [ scc.git] DEBUG Already up to date. 2025-11-28 00:32:43,975 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2025-11-28 00:32:44,240 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-11-28 00:32:44,240 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2025-11-28 00:32:44,245 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2025-11-28 00:32:44,503 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-11-28 00:32:44,503 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2025-11-28 00:32:44,507 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2025-11-28 00:32:44,757 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2025-11-28 00:32:44,757 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2025-11-28 00:32:44,761 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:32:44,761 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:44,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:44,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2025-11-28 00:32:44,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:44,768 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2025-11-28 00:32:44,775 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:44,778 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2025-11-28 00:32:44,778 [ scc.git] DEBUG package.json | 2 +- 2025-11-28 00:32:44,778 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2025-11-28 00:32:44,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:44,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2025-11-28 00:32:44,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:44,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2025-11-28 00:32:44,933 [ scc.git] DEBUG Auto-merging package-lock.json 2025-11-28 00:32:44,933 [ scc.git] DEBUG Auto-merging package.json 2025-11-28 00:32:44,934 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:44,937 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2025-11-28 00:32:44,937 [ scc.git] DEBUG package.json | 2 +- 2025-11-28 00:32:44,937 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2025-11-28 00:32:45,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:45,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-11-28 00:32:45,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:45,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2025-11-28 00:32:45,341 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:45,343 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:32:45,343 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:32:45,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:45,724 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:32:45,762 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:45,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:45,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:32:45,799 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:32:45,803 [ scc.git] DEBUG has no local changes 2025-11-28 00:32:45,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:32:45,808 [ scc.git] DEBUG [detached HEAD d93d64a] merge master -Dorg -Ssuccess-only 2025-11-28 00:32:45,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:32:45,809 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:32:46,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2025-11-28 00:32:46,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2025-11-28 00:32:46,696 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:32:47,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-11-28 00:32:47,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:48,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:48,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2025-11-28 00:32:49,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:32:49,125 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:32:49,125 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:32:49,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-11-28 00:32:49,125 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:49,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:49,128 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:32:49,130 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:32:49,130 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:32:49,133 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:32:49,135 [ scc.git] DEBUG Already up to date. 2025-11-28 00:32:49,135 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-11-28 00:32:49,407 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2025-11-28 00:32:49,407 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-11-28 00:32:49,411 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:32:49,411 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:49,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:49,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2025-11-28 00:32:49,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:49,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2025-11-28 00:32:49,424 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:49,426 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:32:49,426 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:32:49,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:49,567 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:32:49,602 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:49,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:49,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:32:49,639 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:32:49,643 [ scc.git] DEBUG has no local changes 2025-11-28 00:32:49,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:32:49,648 [ scc.git] DEBUG [detached HEAD 14b64f3] merge master -Dorg -Ssuccess-only 2025-11-28 00:32:49,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:32:49,649 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:32:50,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2025-11-28 00:32:50,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2025-11-28 00:32:50,578 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:32:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-11-28 00:32:51,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:52,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:52,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-11-28 00:32:53,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:53,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2025-11-28 00:32:54,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2025-11-28 00:32:54,128 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:32:54,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2025-11-28 00:32:55,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2025-11-28 00:32:55,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-11-28 00:32:56,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:56,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:32:57,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-11-28 00:32:57,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2025-11-28 00:32:58,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2025-11-28 00:32:58,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2025-11-28 00:32:58,624 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2025-11-28 00:32:59,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2025-11-28 00:32:59,106 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:32:59,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-11-28 00:32:59,106 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:59,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:59,108 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:32:59,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:32:59,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:32:59,113 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:32:59,116 [ scc.git] DEBUG Already up to date. 2025-11-28 00:32:59,116 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2025-11-28 00:32:59,383 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-11-28 00:32:59,383 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2025-11-28 00:32:59,387 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2025-11-28 00:32:59,643 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2025-11-28 00:32:59,643 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2025-11-28 00:32:59,647 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:32:59,647 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:32:59,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:59,649 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2025-11-28 00:32:59,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:59,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2025-11-28 00:32:59,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:59,663 [ scc.git] DEBUG setup.py | 4 +- 2025-11-28 00:32:59,663 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2025-11-28 00:32:59,663 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2025-11-28 00:32:59,663 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2025-11-28 00:32:59,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:32:59,893 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2025-11-28 00:32:59,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:32:59,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2025-11-28 00:32:59,903 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:32:59,906 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:32:59,906 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:33:00,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:00,314 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:00,350 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:00,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:00,352 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:00,386 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:00,389 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:00,389 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:00,394 [ scc.git] DEBUG [detached HEAD 896492e] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:00,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:00,395 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:00,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2025-11-28 00:33:01,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2025-11-28 00:33:01,369 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:33:01,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-11-28 00:33:02,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:02,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:03,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2025-11-28 00:33:03,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:03,938 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:33:04,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2025-11-28 00:33:04,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2025-11-28 00:33:05,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-11-28 00:33:05,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:06,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2025-11-28 00:33:06,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:06,969 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2025-11-28 00:33:06,969 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:06,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-11-28 00:33:06,969 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:06,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:06,971 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:06,973 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:06,973 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:06,976 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:06,979 [ scc.git] DEBUG Already up to date. 2025-11-28 00:33:06,979 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-11-28 00:33:07,257 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-11-28 00:33:07,257 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-11-28 00:33:07,262 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-11-28 00:33:07,525 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2025-11-28 00:33:07,525 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-11-28 00:33:07,529 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:07,529 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:07,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:07,531 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-11-28 00:33:07,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:07,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-11-28 00:33:07,544 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG Auto-merging setup.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2025-11-28 00:33:07,544 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:33:07,545 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:33:07,547 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2025-11-28 00:33:07,551 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2025-11-28 00:33:07,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:07,707 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2025-11-28 00:33:07,710 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2025-11-28 00:33:07,713 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - setup.py - omero_signup/views.py - omero_signup/signup_settings.py --conflicts 2025-11-28 00:33:07,715 [ scc.config] DEBUG Found github.token 2025-11-28 00:33:07,715 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2025-11-28 00:33:07,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-11-28 00:33:07,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:07,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2025-11-28 00:33:07,726 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:07,728 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:33:07,728 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:33:08,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:08,159 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:08,196 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:08,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:08,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:08,232 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:08,235 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:08,235 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:08,240 [ scc.git] DEBUG [detached HEAD 2da5b74] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:08,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:08,240 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:08,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2025-11-28 00:33:09,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None 2025-11-28 00:33:09,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-11-28 00:33:10,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:10,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:11,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None 2025-11-28 00:33:11,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:11,801 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps' 2025-11-28 00:33:12,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2025-11-28 00:33:12,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2025-11-28 00:33:13,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2025-11-28 00:33:13,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:14,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:14,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2025-11-28 00:33:15,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2025-11-28 00:33:15,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2025-11-28 00:33:16,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2025-11-28 00:33:16,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-11-28 00:33:17,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:17,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2025-11-28 00:33:18,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:18,079 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-11-28 00:33:18,080 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:18,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-11-28 00:33:18,080 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:18,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:18,083 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:18,085 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:18,085 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:18,087 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:18,093 [ scc.git] DEBUG Updating cda3ec6..40b2517 2025-11-28 00:33:18,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2025-11-28 00:33:18,765 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2025-11-28 00:33:19,043 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-11-28 00:33:19,043 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2025-11-28 00:33:19,048 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head' 2025-11-28 00:33:19,306 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2025-11-28 00:33:19,306 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD 2025-11-28 00:33:19,310 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:19,310 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:19,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:19,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2025-11-28 00:33:19,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:19,318 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2025-11-28 00:33:19,328 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2025-11-28 00:33:19,331 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2025-11-28 00:33:19,332 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2025-11-28 00:33:19,333 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2025-11-28 00:33:19,333 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2025-11-28 00:33:19,333 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2025-11-28 00:33:19,333 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2025-11-28 00:33:19,333 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2025-11-28 00:33:19,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:19,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-11-28 00:33:19,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:19,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6' 2025-11-28 00:33:19,508 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:19,511 [ scc.git] DEBUG docker | 1 + 2025-11-28 00:33:19,511 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2025-11-28 00:33:20,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:20,107 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:20,143 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:20,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:20,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:20,181 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:20,185 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:20,185 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Updating cda3ec6..40b2517 Previously merged: - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:20,191 [ scc.git] DEBUG [detached HEAD cea5001] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:20,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:20,191 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:20,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2025-11-28 00:33:21,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2025-11-28 00:33:21,150 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:33:21,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-11-28 00:33:22,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:22,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:23,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2025-11-28 00:33:23,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:23,817 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:33:23,817 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:23,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-11-28 00:33:23,817 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:23,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:23,820 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:23,822 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:23,822 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:23,824 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:23,827 [ scc.git] DEBUG Already up to date. 2025-11-28 00:33:23,827 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2025-11-28 00:33:24,099 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2025-11-28 00:33:24,099 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2025-11-28 00:33:24,102 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:24,102 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:24,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:24,104 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-11-28 00:33:24,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:24,109 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2025-11-28 00:33:24,115 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:24,118 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:33:24,118 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:33:24,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:24,278 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:24,314 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:24,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:24,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:24,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:24,354 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:24,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:24,360 [ scc.git] DEBUG [detached HEAD 964fe0a] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:24,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:24,360 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:24,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2025-11-28 00:33:25,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2025-11-28 00:33:25,206 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:33:25,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-11-28 00:33:26,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:26,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:27,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2025-11-28 00:33:27,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:27,714 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:33:27,714 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:27,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-11-28 00:33:27,714 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:27,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:27,716 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:27,718 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:27,718 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:27,721 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:27,728 [ scc.git] DEBUG Updating deab817..160d894 2025-11-28 00:33:28,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2025-11-28 00:33:28,328 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2025-11-28 00:33:28,615 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2025-11-28 00:33:28,615 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2025-11-28 00:33:28,619 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:28,619 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:28,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:28,621 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-11-28 00:33:28,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:28,625 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2025-11-28 00:33:28,632 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:28,634 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:33:28,634 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:33:28,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:28,808 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:28,845 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:28,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:28,847 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:28,882 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:28,885 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:28,885 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:28,890 [ scc.git] DEBUG [detached HEAD fb2040c] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:28,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:28,891 [ scc.git] INFO Overriding base-branch from master to main 2025-11-28 00:33:28,891 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:29,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2025-11-28 00:33:29,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2025-11-28 00:33:30,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2025-11-28 00:33:30,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-11-28 00:33:31,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:31,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:32,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2025-11-28 00:33:32,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:32,843 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2025-11-28 00:33:33,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2025-11-28 00:33:33,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2025-11-28 00:33:34,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2025-11-28 00:33:34,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-11-28 00:33:35,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:35,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2025-11-28 00:33:36,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:36,279 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-11-28 00:33:36,279 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:36,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-11-28 00:33:36,279 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:36,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:36,281 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2025-11-28 00:33:36,283 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:36,283 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2025-11-28 00:33:36,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2025-11-28 00:33:36,293 [ scc.git] DEBUG Updating 8f3c313..00e0207 2025-11-28 00:33:36,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2025-11-28 00:33:36,930 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2025-11-28 00:33:37,199 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-11-28 00:33:37,199 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2025-11-28 00:33:37,203 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2025-11-28 00:33:37,465 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2025-11-28 00:33:37,465 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2025-11-28 00:33:37,468 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:37,468 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:37,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:37,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-11-28 00:33:37,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:37,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-11-28 00:33:37,482 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2025-11-28 00:33:37,482 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2025-11-28 00:33:37,482 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-11-28 00:33:37,482 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:33:37,483 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:33:37,485 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-11-28 00:33:37,488 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3 2025-11-28 00:33:37,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:37,645 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2025-11-28 00:33:37,648 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15' 2025-11-28 00:33:37,650 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2025-11-28 00:33:37,652 [ scc.config] DEBUG Found github.token 2025-11-28 00:33:37,652 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2025-11-28 00:33:37,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-11-28 00:33:37,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:37,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2025-11-28 00:33:37,665 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2025-11-28 00:33:37,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:37,669 [ scc.git] DEBUG README.rst | 3 + 2025-11-28 00:33:37,669 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2025-11-28 00:33:37,669 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2025-11-28 00:33:37,669 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2025-11-28 00:33:37,669 [ scc.git] DEBUG setup.py | 5 +- 2025-11-28 00:33:37,669 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2025-11-28 00:33:37,669 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2025-11-28 00:33:38,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:38,049 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:38,086 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:38,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:38,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:38,123 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:38,126 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:38,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:38,132 [ scc.git] DEBUG [detached HEAD d2deca4] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:38,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:38,132 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:38,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2025-11-28 00:33:39,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2025-11-28 00:33:39,038 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:33:39,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-11-28 00:33:40,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:40,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:41,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2025-11-28 00:33:41,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:41,490 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:33:41,490 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:41,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-11-28 00:33:41,490 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:41,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:41,492 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:41,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:41,495 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:41,497 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:41,500 [ scc.git] DEBUG Already up to date. 2025-11-28 00:33:41,500 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2025-11-28 00:33:41,773 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2025-11-28 00:33:41,773 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2025-11-28 00:33:41,777 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:41,777 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:41,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:41,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-11-28 00:33:41,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:41,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2025-11-28 00:33:41,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:41,793 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:33:41,794 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:33:41,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:41,932 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:41,967 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:41,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:41,969 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:42,005 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:42,007 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:42,007 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:42,013 [ scc.git] DEBUG [detached HEAD 6d95888] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:42,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:42,013 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:42,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2025-11-28 00:33:42,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2025-11-28 00:33:42,922 [ scc.repo] DEBUG # ... Include label: dependencies 2025-11-28 00:33:43,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-11-28 00:33:43,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:44,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-11-28 00:33:45,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2025-11-28 00:33:45,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:45,500 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:33:45,500 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:45,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-11-28 00:33:45,500 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:45,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:45,503 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:45,505 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:45,505 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:45,507 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:45,510 [ scc.git] DEBUG Already up to date. 2025-11-28 00:33:45,510 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2025-11-28 00:33:45,772 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2025-11-28 00:33:45,773 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2025-11-28 00:33:45,776 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:45,776 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:45,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:45,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-11-28 00:33:45,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:45,783 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2025-11-28 00:33:45,789 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-11-28 00:33:45,791 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-11-28 00:33:45,791 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-11-28 00:33:45,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:45,943 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:45,979 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:45,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:45,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:46,016 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:46,020 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:46,020 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:46,025 [ scc.git] DEBUG [detached HEAD 91f62db] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:46,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:46,025 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:46,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2025-11-28 00:33:46,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2025-11-28 00:33:47,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2025-11-28 00:33:47,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-11-28 00:33:48,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-11-28 00:33:48,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2025-11-28 00:33:49,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2025-11-28 00:33:49,316 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2025-11-28 00:33:49,317 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:49,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-11-28 00:33:49,317 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:49,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:49,319 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-11-28 00:33:49,322 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:49,322 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-11-28 00:33:49,324 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-11-28 00:33:49,327 [ scc.git] DEBUG Already up to date. 2025-11-28 00:33:49,327 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2025-11-28 00:33:49,594 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2025-11-28 00:33:49,594 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2025-11-28 00:33:49,598 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:49,598 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:49,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:49,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-11-28 00:33:49,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:49,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-11-28 00:33:49,612 [ scc.git] DEBUG Auto-merging Dockerfile 2025-11-28 00:33:49,612 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2025-11-28 00:33:49,612 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-11-28 00:33:49,612 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-11-28 00:33:49,615 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-11-28 00:33:49,619 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2025-11-28 00:33:49,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:49,763 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2025-11-28 00:33:49,765 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2025-11-28 00:33:49,768 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#586](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2025-11-28 00:33:49,770 [ scc.config] DEBUG Found github.token 2025-11-28 00:33:49,770 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2025-11-28 00:33:49,770 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:49,805 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:49,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:49,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:49,841 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:49,844 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:49,844 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:49,850 [ scc.git] DEBUG [detached HEAD aed36d6] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:49,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:49,850 [ scc.git] INFO Overriding base-branch from master to develop 2025-11-28 00:33:49,850 [ scc.repo] DEBUG ## PRs found: 2025-11-28 00:33:50,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-11-28 00:33:50,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/229 HTTP/1.1" 200 None 2025-11-28 00:33:51,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/229/comments HTTP/1.1" 200 None 2025-11-28 00:33:51,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-11-28 00:33:52,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-11-28 00:33:52,263 [ scc.repo] DEBUG ## Branches found: 2025-11-28 00:33:52,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-11-28 00:33:52,263 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:52,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:52,266 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-11-28 00:33:52,268 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-11-28 00:33:52,268 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-11-28 00:33:52,271 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-11-28 00:33:52,281 [ scc.git] DEBUG Updating 4b4c755..0c7356a 2025-11-28 00:33:52,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2025-11-28 00:33:53,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2025-11-28 00:33:54,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2025-11-28 00:33:54,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2025-11-28 00:33:55,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2025-11-28 00:33:55,413 [ scc.git] DEBUG ## Unique users: [] 2025-11-28 00:33:55,413 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:55,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:55,415 [ scc.git] DEBUG Calling 'git submodule update' 2025-11-28 00:33:55,451 [ scc.git] DEBUG Get sha1 of %s 2025-11-28 00:33:55,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-11-28 00:33:55,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:55,488 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:33:55,491 [ scc.git] DEBUG has no local changes 2025-11-28 00:33:55,492 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..0c7356a Previously merged: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:33:55,497 [ scc.git] DEBUG [detached HEAD 47b54a4] merge master -Dorg -Ssuccess-only 2025-11-28 00:33:55,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:33:55,497 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-11-28 00:33:55,564 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2025-11-28 00:33:55,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:55,818 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2025-11-28 00:33:55,820 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2025-11-28 00:33:56,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:56,207 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2025-11-28 00:33:56,209 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2025-11-28 00:33:56,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:56,615 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2025-11-28 00:33:56,617 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2025-11-28 00:33:57,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:57,020 [ scc.config] DEBUG Found submodule.omero-figure.url 2025-11-28 00:33:57,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:57,421 [ scc.config] DEBUG Found submodule.omero-figure.branch 2025-11-28 00:33:57,423 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2025-11-28 00:33:57,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:57,821 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2025-11-28 00:33:57,823 [ scc.config] DEBUG Found submodule.omero-gallery.url 2025-11-28 00:33:58,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:58,222 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2025-11-28 00:33:58,224 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2025-11-28 00:33:58,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:58,619 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2025-11-28 00:33:58,621 [ scc.config] DEBUG Found submodule.omero-mapr.url 2025-11-28 00:33:59,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:59,025 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2025-11-28 00:33:59,027 [ scc.config] DEBUG Found submodule.omero-metadata.url 2025-11-28 00:33:59,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:59,409 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2025-11-28 00:33:59,411 [ scc.config] DEBUG Found submodule.omero-parade.url 2025-11-28 00:33:59,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:33:59,846 [ scc.config] DEBUG Found submodule.omero-parade.branch 2025-11-28 00:33:59,848 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2025-11-28 00:34:00,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:00,246 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2025-11-28 00:34:00,247 [ scc.config] DEBUG Found submodule.omero-rois.url 2025-11-28 00:34:00,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:00,665 [ scc.config] DEBUG Found submodule.omero-signup.url 2025-11-28 00:34:01,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:01,087 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2025-11-28 00:34:01,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:01,560 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2025-11-28 00:34:01,562 [ scc.config] DEBUG Found submodule.omero-upload.url 2025-11-28 00:34:01,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:01,959 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2025-11-28 00:34:02,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:02,356 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2025-11-28 00:34:02,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:02,770 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2025-11-28 00:34:02,772 [ scc.config] DEBUG Found submodule.omero-weberror.url 2025-11-28 00:34:03,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:03,175 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2025-11-28 00:34:03,176 [ scc.config] DEBUG Found submodule.omero-webtest.url 2025-11-28 00:34:03,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:03,581 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2025-11-28 00:34:03,583 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2025-11-28 00:34:03,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:03,968 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2025-11-28 00:34:03,970 [ scc.config] DEBUG Found submodule.scripts.url 2025-11-28 00:34:04,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-11-28 00:34:04,388 [ scc.config] DEBUG Found submodule.scripts.branch 2025-11-28 00:34:04,388 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-11-28 00:34:04,462 [ scc.git] DEBUG has local changes 2025-11-28 00:34:04,462 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 69 dominikl 'Fix help text for impo/export commands' - PR 71 dominikl 'Escape slash character in image names' - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-zarr Excluded PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..37ea700 Previously merged: - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' - PR 181 will-moore 'Add labels support for import' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) - PR 619 will-moore 'OME-Zarr support' (stage: draft) Updating 9cc36cde..691a9a60 Previously merged: - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 600 Rdornier 'Label on rois' Conflicting PRs (not included): - PR 637 Rdornier 'Fix scalebar position' - PR 643 Rdornier 'Shape scaling' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..bb94cf8 Previously merged: - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Updating cda3ec6..40b2517 Previously merged: - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' - PR 76 will-moore 'Run cli deps' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..00e0207 Previously merged: - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..0c7356a Previously merged: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#586 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/586/)' 2025-11-28 00:34:04,472 [ scc.git] DEBUG [detached HEAD 396825c] merge master -Dorg -Ssuccess-only 2025-11-28 00:34:04,472 [ scc.merge] INFO Repository: ome/omero-plugins 2025-11-28 00:34:04,472 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2025-11-28 00:34:04,472 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,472 [ scc.merge] INFO 2025-11-28 00:34:04,472 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,472 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2025-11-28 00:34:04,472 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2025-11-28 00:34:04,472 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2025-11-28 00:34:04,472 [ scc.merge] INFO 2025-11-28 00:34:04,472 [ scc.merge] INFO Repository: ome/minimal-omero-client 2025-11-28 00:34:04,472 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,472 [ scc.merge] INFO 2025-11-28 00:34:04,472 [ scc.merge] INFO 2025-11-28 00:34:04,472 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2025-11-28 00:34:04,472 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,472 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2025-11-28 00:34:04,473 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Repository: ome/omero-cli-render 2025-11-28 00:34:04,473 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2025-11-28 00:34:04,473 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2025-11-28 00:34:04,473 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2025-11-28 00:34:04,473 [ scc.merge] INFO Updating 11d3587..37ea700 2025-11-28 00:34:04,473 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2025-11-28 00:34:04,473 [ scc.merge] INFO 2025-11-28 00:34:04,473 [ scc.merge] INFO Repository: ome/omero-figure 2025-11-28 00:34:04,473 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,473 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' (user: Rdornier) 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft) 2025-11-28 00:34:04,474 [ scc.merge] INFO Updating 9cc36cde..691a9a60 2025-11-28 00:34:04,474 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 643 Rdornier 'Shape scaling' 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2025-11-28 00:34:04,474 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Repository: ome/omero-gallery 2025-11-28 00:34:04,474 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2025-11-28 00:34:04,474 [ scc.merge] INFO 2025-11-28 00:34:04,474 [ scc.merge] INFO Repository: ome/omero-iviewer 2025-11-28 00:34:04,474 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2025-11-28 00:34:04,474 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2025-11-28 00:34:04,475 [ scc.merge] INFO Updating 7a798ce..bb94cf8 2025-11-28 00:34:04,475 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Repository: ome/omero-mapr 2025-11-28 00:34:04,475 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2025-11-28 00:34:04,475 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Repository: ome/omero-metadata 2025-11-28 00:34:04,475 [ scc.merge] INFO Updating 3cd120c..55060a2 2025-11-28 00:34:04,475 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Repository: ome/omero-parade 2025-11-28 00:34:04,475 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2025-11-28 00:34:04,475 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,475 [ scc.merge] INFO 2025-11-28 00:34:04,475 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2025-11-28 00:34:04,475 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2025-11-28 00:34:04,476 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Repository: ome/omero-rois 2025-11-28 00:34:04,476 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-11-28 00:34:04,476 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Repository: ome/omero-signup 2025-11-28 00:34:04,476 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2025-11-28 00:34:04,476 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2025-11-28 00:34:04,476 [ scc.merge] INFO Updating cda3ec6..40b2517 2025-11-28 00:34:04,476 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Repository: ome/omero-upload 2025-11-28 00:34:04,476 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,476 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2025-11-28 00:34:04,476 [ scc.merge] INFO Updating deab817..160d894 2025-11-28 00:34:04,476 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,476 [ scc.merge] INFO - PR 20 jburel 'Build' 2025-11-28 00:34:04,476 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Repository: ome/omero-web-zarr 2025-11-28 00:34:04,477 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2025-11-28 00:34:04,477 [ scc.merge] INFO Updating 8f3c313..00e0207 2025-11-28 00:34:04,477 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2025-11-28 00:34:04,477 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2025-11-28 00:34:04,477 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Merged PRs: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2025-11-28 00:34:04,477 [ scc.merge] INFO Already up to date. 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Conflicting PRs (not included): 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO Repository: ome/scripts 2025-11-28 00:34:04,477 [ scc.merge] INFO Excluded PRs: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' (user: Rdornier) 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-11-28 00:34:04,477 [ scc.merge] INFO Updating 4b4c755..0c7356a 2025-11-28 00:34:04,477 [ scc.merge] INFO Previously merged: 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-11-28 00:34:04,477 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,477 [ scc.merge] INFO 2025-11-28 00:34:04,478 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-11-28 00:34:04,478 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2025-11-28 00:34:04,480 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2025-11-28 00:34:04,482 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2025-11-28 00:34:04,484 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2025-11-28 00:34:04,486 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2025-11-28 00:34:04,488 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2025-11-28 00:34:04,490 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2025-11-28 00:34:04,492 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2025-11-28 00:34:04,494 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2025-11-28 00:34:04,496 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2025-11-28 00:34:04,498 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2025-11-28 00:34:04,500 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2025-11-28 00:34:04,502 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2025-11-28 00:34:04,504 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2025-11-28 00:34:04,506 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2025-11-28 00:34:04,508 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2025-11-28 00:34:04,510 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2025-11-28 00:34:04,512 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2025-11-28 00:34:04,514 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2025-11-28 00:34:04,516 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2025-11-28 00:34:04,518 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2025-11-28 00:34:04,520 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2025-11-28 00:34:04,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2025-11-28 00:34:04,522 [ scc.git] DEBUG Calling 'git remote' 2025-11-28 00:34:04,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 1098672] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 217863d] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2025-11-28 00:34:50,976 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2025-11-28 00:35:00,192 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2025-11-28 00:35:02,761 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-28 00:35:07,525 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2025-11-28 00:35:47,450 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS