23:20:04 Started by upstream project "Trigger" build number 698 23:20:04 originally caused by: 23:20:04 Started by user devspace 23:20:04 Running as SYSTEM 23:20:04 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-training 23:20:05 [OMERO-training] $ /bin/bash -xe /tmp/jenkins17327187805426089264.sh 23:20:05 + rm -rf /home/omero/workspace/OMERO-training/.venv3 23:20:05 + python3.11 -m venv /home/omero/workspace/OMERO-training/.venv3 23:20:14 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate 23:20:14 ++ deactivate nondestructive 23:20:14 ++ '[' -n '' ']' 23:20:14 ++ '[' -n '' ']' 23:20:14 ++ hash -r 23:20:14 ++ '[' -n '' ']' 23:20:14 ++ unset VIRTUAL_ENV 23:20:14 ++ unset VIRTUAL_ENV_PROMPT 23:20:14 ++ '[' '!' nondestructive = nondestructive ']' 23:20:14 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3 23:20:14 ++ export VIRTUAL_ENV 23:20:14 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 23:20:14 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 23:20:14 ++ export PATH 23:20:14 ++ '[' -n '' ']' 23:20:14 ++ '[' -z '' ']' 23:20:14 ++ _OLD_VIRTUAL_PS1= 23:20:14 ++ PS1='(.venv3) ' 23:20:14 ++ export PS1 23:20:14 ++ VIRTUAL_ENV_PROMPT='(.venv3) ' 23:20:14 ++ export VIRTUAL_ENV_PROMPT 23:20:14 ++ hash -r 23:20:14 + pip install -U pip setuptools 23:20:15 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1) 23:20:15 Collecting pip 23:20:15 Using cached pip-25.3-py3-none-any.whl (1.8 MB) 23:20:15 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (65.5.1) 23:20:15 Collecting setuptools 23:20:15 Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB) 23:20:16 Installing collected packages: setuptools, pip 23:20:16 Attempting uninstall: setuptools 23:20:16 Found existing installation: setuptools 65.5.1 23:20:16 Uninstalling setuptools-65.5.1: 23:20:16 Successfully uninstalled setuptools-65.5.1 23:20:16 Attempting uninstall: pip 23:20:16 Found existing installation: pip 22.3.1 23:20:17 Uninstalling pip-22.3.1: 23:20:17 Successfully uninstalled pip-22.3.1 23:20:17 Successfully installed pip-25.3 setuptools-80.9.0 23:20:18 WARNING: There was an error checking the latest version of pip. 23:20:18 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl 23:20:20 Collecting zeroc-ice==3.6.5 23:20:20 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB) 23:20:22 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 23.2 MB/s 0:00:01 23:20:22 Installing collected packages: zeroc-ice 23:20:23 Successfully installed zeroc-ice-3.6.5 23:20:23 + pip install markdown 23:20:23 Collecting markdown 23:20:23 Using cached markdown-3.10-py3-none-any.whl.metadata (5.1 kB) 23:20:23 Using cached markdown-3.10-py3-none-any.whl (107 kB) 23:20:23 Installing collected packages: markdown 23:20:24 Successfully installed markdown-3.10 23:20:24 + pip install mox3 pytest 'pytest-xdist<2' 23:20:24 Collecting mox3 23:20:24 Using cached mox3-1.1.0-py3-none-any.whl.metadata (3.2 kB) 23:20:24 Collecting pytest 23:20:24 Downloading pytest-9.0.1-py3-none-any.whl.metadata (7.6 kB) 23:20:24 Collecting pytest-xdist<2 23:20:24 Using cached pytest_xdist-1.34.0-py2.py3-none-any.whl.metadata (14 kB) 23:20:24 Collecting execnet>=1.1 (from pytest-xdist<2) 23:20:24 Downloading execnet-2.1.2-py3-none-any.whl.metadata (2.9 kB) 23:20:25 Collecting pytest-forked (from pytest-xdist<2) 23:20:25 Using cached pytest_forked-1.6.0-py3-none-any.whl.metadata (3.5 kB) 23:20:25 Collecting six (from pytest-xdist<2) 23:20:25 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) 23:20:25 Collecting pbr!=2.1.0,>=2.0.0 (from mox3) 23:20:25 Downloading pbr-7.0.3-py2.py3-none-any.whl.metadata (3.8 kB) 23:20:25 Collecting fixtures>=3.0.0 (from mox3) 23:20:25 Using cached fixtures-4.2.6-py3-none-any.whl.metadata (22 kB) 23:20:25 Collecting iniconfig>=1.0.1 (from pytest) 23:20:25 Using cached iniconfig-2.3.0-py3-none-any.whl.metadata (2.5 kB) 23:20:25 Collecting packaging>=22 (from pytest) 23:20:25 Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB) 23:20:25 Collecting pluggy<2,>=1.5 (from pytest) 23:20:25 Using cached pluggy-1.6.0-py3-none-any.whl.metadata (4.8 kB) 23:20:25 Collecting pygments>=2.7.2 (from pytest) 23:20:25 Using cached pygments-2.19.2-py3-none-any.whl.metadata (2.5 kB) 23:20:25 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from pbr!=2.1.0,>=2.0.0->mox3) (80.9.0) 23:20:25 Collecting py (from pytest-forked->pytest-xdist<2) 23:20:25 Using cached py-1.11.0-py2.py3-none-any.whl.metadata (2.8 kB) 23:20:25 Using cached pytest_xdist-1.34.0-py2.py3-none-any.whl (36 kB) 23:20:25 Using cached mox3-1.1.0-py3-none-any.whl (43 kB) 23:20:25 Downloading pytest-9.0.1-py3-none-any.whl (373 kB) 23:20:25 Using cached pluggy-1.6.0-py3-none-any.whl (20 kB) 23:20:25 Downloading execnet-2.1.2-py3-none-any.whl (40 kB) 23:20:25 Using cached fixtures-4.2.6-py3-none-any.whl (66 kB) 23:20:25 Using cached iniconfig-2.3.0-py3-none-any.whl (7.5 kB) 23:20:25 Using cached packaging-25.0-py3-none-any.whl (66 kB) 23:20:25 Downloading pbr-7.0.3-py2.py3-none-any.whl (131 kB) 23:20:25 Using cached pygments-2.19.2-py3-none-any.whl (1.2 MB) 23:20:26 Using cached pytest_forked-1.6.0-py3-none-any.whl (4.9 kB) 23:20:26 Using cached py-1.11.0-py2.py3-none-any.whl (98 kB) 23:20:26 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) 23:20:26 Installing collected packages: six, pygments, py, pluggy, pbr, packaging, iniconfig, fixtures, execnet, pytest, mox3, pytest-forked, pytest-xdist 23:20:27 23:20:27 Successfully installed execnet-2.1.2 fixtures-4.2.6 iniconfig-2.3.0 mox3-1.1.0 packaging-25.0 pbr-7.0.3 pluggy-1.6.0 py-1.11.0 pygments-2.19.2 pytest-9.0.1 pytest-forked-1.6.0 pytest-xdist-1.34.0 six-1.17.0 23:20:27 + pip install tables 23:20:28 Collecting tables 23:20:28 Using cached tables-3.10.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB) 23:20:28 Collecting numpy>=1.20.0 (from tables) 23:20:28 Using cached numpy-2.3.5-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB) 23:20:29 Collecting numexpr>=2.6.2 (from tables) 23:20:29 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB) 23:20:29 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from tables) (25.0) 23:20:29 Collecting py-cpuinfo (from tables) 23:20:29 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes) 23:20:29 Collecting blosc2>=2.3.0 (from tables) 23:20:29 Using cached blosc2-3.11.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.1 kB) 23:20:29 Collecting typing-extensions>=4.4.0 (from tables) 23:20:29 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) 23:20:29 Collecting ndindex (from blosc2>=2.3.0->tables) 23:20:29 Using cached ndindex-1.10.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.6 kB) 23:20:29 Collecting msgpack (from blosc2>=2.3.0->tables) 23:20:29 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB) 23:20:29 Collecting platformdirs (from blosc2>=2.3.0->tables) 23:20:29 Using cached platformdirs-4.5.0-py3-none-any.whl.metadata (12 kB) 23:20:29 Collecting requests (from blosc2>=2.3.0->tables) 23:20:29 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) 23:20:29 Collecting charset_normalizer<4,>=2 (from 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numpy-2.3.5-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB) 23:20:30 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) 23:20:30 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB) 23:20:30 Using cached ndindex-1.10.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (528 kB) 23:20:31 Using cached platformdirs-4.5.0-py3-none-any.whl (18 kB) 23:20:31 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB) 23:20:31 Using cached requests-2.32.5-py3-none-any.whl (64 kB) 23:20:31 Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) 23:20:31 Using cached idna-3.11-py3-none-any.whl (71 kB) 23:20:31 Using cached urllib3-2.5.0-py3-none-any.whl (129 kB) 23:20:31 Using cached certifi-2025.11.12-py3-none-any.whl (159 kB) 23:20:31 Installing collected packages: py-cpuinfo, urllib3, typing-extensions, platformdirs, numpy, ndindex, msgpack, idna, charset_normalizer, certifi, requests, numexpr, blosc2, tables 23:20:34 23:20:34 Successfully installed blosc2-3.11.1 certifi-2025.11.12 charset_normalizer-3.4.4 idna-3.11 msgpack-1.1.2 ndindex-1.10.0 numexpr-2.14.1 numpy-2.3.5 platformdirs-4.5.0 py-cpuinfo-9.0.0 requests-2.32.5 tables-3.10.2 typing-extensions-4.15.0 urllib3-2.5.0 23:20:34 + pip install jinja2 23:20:34 Collecting jinja2 23:20:34 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB) 23:20:35 Collecting MarkupSafe>=2.0 (from jinja2) 23:20:35 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB) 23:20:35 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB) 23:20:35 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB) 23:20:35 Installing collected packages: MarkupSafe, jinja2 23:20:35 23:20:35 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6 23:20:35 + rm -rf /home/omero/workspace/OMERO-training/omero-blitz-5.8.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-training/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-training/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-training/omero_py-5.21.3.dev0.tar.gz /home/omero/workspace/OMERO-training/omero_scripts-5.9.2.dev0.tar.gz /home/omero/workspace/OMERO-training/OMERO.server /home/omero/workspace/OMERO-training/omero_web-5.29.3.dev0.tar.gz /home/omero/workspace/OMERO-training/openmicroscopy /home/omero/workspace/OMERO-training/version.properties 23:20:36 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 565 23:20:40 Copied 2 artifacts from "OMERO-build" build number 568 23:20:41 Copied 2 artifacts from "OMERO-build-build" build number 599 23:20:41 [OMERO-training] $ /bin/bash -xe /tmp/jenkins9592192602209095701.sh 23:20:41 + source /home/settings.env 23:20:41 ++ OMERO_DB_HOST=pg 23:20:41 ++ OMERO_DB_USER=postgres 23:20:41 ++ OMERO_DB_PASS= 23:20:41 ++ OMERO_ROOT_PASS=omero 23:20:41 ++ OMERO_DATA_DIR=/OMERO 23:20:41 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR 23:20:41 + export ZIP_FILE=/home/omero/workspace/OMERO-training/omero-blitz-VERSION-python.zip 23:20:41 + ZIP_FILE=/home/omero/workspace/OMERO-training/omero-blitz-VERSION-python.zip 23:20:41 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-training/version.properties 23:20:41 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-training/version.properties 23:20:41 + OMERO_EXAMPLE_DIST=/home/omero/workspace/OMERO-training/openmicroscopy 23:20:41 ++ ls openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 + ZIP=openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 + DIST=openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568 23:20:41 + unzip -n openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 Archive: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 creating: 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openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__4/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__4/OMERO3A__3.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__4/OMERO3__5.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__5/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__5/OMERO3A__4.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__6/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__6/OMERO3A__5.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__7/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__7/OMERO3A__6.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__8/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__8/OMERO3A__6.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__9/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__9/OMERO3A__8.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__4/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__4/OMERO3__1.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__5/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__5/OMERO3__4.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__6/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__6/OMERO3__5.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__7/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__7/OMERO3__6.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.1__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.1__0/OMERO4__0.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/OMERO4.1__0.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/t/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.3__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.3__0/OMERO4.2__0.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.4__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.4__0/OMERO4.1__0.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.4__0/OMERO4.3__0.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4__0/OMERO3A__11.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/OMERO4.4__0.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.0__0.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.1__0.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.2__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.2__0/OMERO5.1__1.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/OMERO5.2__0.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/delete-ns-orphans.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__1/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__2/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__3/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql 23:20:41 creating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/ 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__0.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__1.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/psql-footer.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/psql-header.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/schema.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/views.sql 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/test.xml 23:20:41 inflating: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/update_dependencies.sh 23:20:41 extracting: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/components/antlib/resources/gitversion.xml 23:20:41 extracting: openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568/components/tools/OmeroCpp/cmake/GitVersion.cmake 23:20:41 + rm -f openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 + mv /home/omero/workspace/OMERO-training/openmicroscopy-5.6.3-578-f4ebc2c27c-ice36-b568 /home/omero/workspace/OMERO-training/openmicroscopy 23:20:41 + export OMERODIR=/home/omero/workspace/OMERO-training/OMERO.server 23:20:41 + OMERODIR=/home/omero/workspace/OMERO-training/OMERO.server 23:20:41 ++ ls OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 + ZIP=OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 + DIST=OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568 23:20:41 + unzip -n OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 Archive: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/blitz/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/grid/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/profiles/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/templates/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/templates/error/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/etc/templates/grid/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/client/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/luts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/luts/janelia/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/luts/matplotlib/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/luts/ncsa_paledit/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/luts/seaborn/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/luts/wcif/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/analysis_scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/annotation_scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/export_scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/figure_scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/import_scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/scripts/omero/util_scripts/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/lib/server/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/share/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/share/licenses/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/misc/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__1/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__10/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__11/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__2/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__3/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__4/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__5/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__6/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__7/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__8/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3A__9/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__4/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__5/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__6/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO3__7/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.1__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.2__0/t/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.3__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.4__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.2__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__1/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__2/ 23:20:41 creating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__3/ 23:20:41 creating: 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23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.4__0/OMERO4.1__0.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4.4__0/OMERO4.3__0.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO4__0/OMERO3A__11.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.0__0/OMERO4.4__0.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.0__0.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql 23:20:43 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inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__0.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.3__1.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/psql-footer.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/psql-header.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/schema.sql 23:20:43 inflating: OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568/sql/psql/OMERO5.4__0/views.sql 23:20:43 + rm -f OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568.zip 23:20:44 + mv /home/omero/workspace/OMERO-training/OMERO.server-5.6.3-578-f4ebc2c27c-ice36-b568 /home/omero/workspace/OMERO-training/OMERO.server 23:20:44 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate 23:20:44 ++ deactivate nondestructive 23:20:44 ++ '[' -n '' ']' 23:20:44 ++ '[' -n '' ']' 23:20:44 ++ hash -r 23:20:44 ++ '[' -n '' ']' 23:20:44 ++ unset VIRTUAL_ENV 23:20:44 ++ unset VIRTUAL_ENV_PROMPT 23:20:44 ++ '[' '!' nondestructive = nondestructive ']' 23:20:44 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3 23:20:44 ++ export VIRTUAL_ENV 23:20:44 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 23:20:44 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 23:20:44 ++ export PATH 23:20:44 ++ '[' -n '' ']' 23:20:44 ++ '[' -z '' ']' 23:20:44 ++ _OLD_VIRTUAL_PS1= 23:20:44 ++ PS1='(.venv3) ' 23:20:44 ++ export PS1 23:20:44 ++ VIRTUAL_ENV_PROMPT='(.venv3) ' 23:20:44 ++ export VIRTUAL_ENV_PROMPT 23:20:44 ++ hash -r 23:20:44 + for x in *.gz 23:20:44 + pip install omero_dropbox-5.7.1.dev0.tar.gz 23:20:44 Processing ./omero_dropbox-5.7.1.dev0.tar.gz 23:20:44 Installing build dependencies: started 23:20:45 Installing build dependencies: finished with status 'done' 23:20:45 Getting requirements to build wheel: started 23:20:46 Getting requirements to build wheel: finished with status 'done' 23:20:46 Preparing metadata (pyproject.toml): started 23:20:46 Preparing metadata (pyproject.toml): finished with status 'done' 23:20:46 Collecting omero-py (from omero-dropbox==5.7.1.dev0) 23:20:46 Using cached omero_py-5.21.2-py3-none-any.whl.metadata (6.5 kB) 23:20:46 Collecting appdirs (from omero-py->omero-dropbox==5.7.1.dev0) 23:20:46 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB) 23:20:46 Collecting future (from omero-py->omero-dropbox==5.7.1.dev0) 23:20:46 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) 23:20:46 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.3.5) 23:20:47 Collecting Pillow>=10.0.0 (from omero-py->omero-dropbox==5.7.1.dev0) 23:20:47 Using cached pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB) 23:20:47 Collecting PyYAML (from omero-py->omero-dropbox==5.7.1.dev0) 23:20:47 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) 23:20:47 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5) 23:20:47 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5) 23:20:47 Collecting portalocker (from omero-py->omero-dropbox==5.7.1.dev0) 23:20:47 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB) 23:20:47 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4) 23:20:47 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11) 23:20:47 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.5.0) 23:20:47 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.11.12) 23:20:47 Using cached omero_py-5.21.2-py3-none-any.whl (2.8 MB) 23:20:47 Using cached pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB) 23:20:48 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB) 23:20:48 Using cached future-1.0.0-py3-none-any.whl (491 kB) 23:20:48 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB) 23:20:48 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) 23:20:48 Building wheels for collected packages: omero-dropbox 23:20:48 Building wheel for omero-dropbox (pyproject.toml): started 23:20:48 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done' 23:20:48 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=c4bb3cb38f341fa81fbceb4ec46ec0fd63c8ebb44cd994adf7ac4fb8262dcda8 23:20:48 Stored in directory: /home/omero/.cache/pip/wheels/27/2f/e4/2a907ecffe4660d4c840758e6c0660e7ef9d3bb50ad634b559 23:20:48 Successfully built omero-dropbox 23:20:48 Installing collected packages: appdirs, PyYAML, portalocker, Pillow, future, omero-py, omero-dropbox 23:20:52 23:20:52 Successfully installed Pillow-12.0.0 PyYAML-6.0.3 appdirs-1.4.4 future-1.0.0 omero-dropbox-5.7.1.dev0 omero-py-5.21.2 portalocker-3.2.0 23:20:52 + for x in *.gz 23:20:52 + pip install omero_marshal-0.9.1.dev0.tar.gz 23:20:52 Processing ./omero_marshal-0.9.1.dev0.tar.gz 23:20:52 Installing build dependencies: started 23:20:53 Installing build dependencies: finished with status 'done' 23:20:53 Getting requirements to build wheel: started 23:20:54 Getting requirements to build wheel: finished with status 'done' 23:20:54 Preparing metadata (pyproject.toml): started 23:20:54 Preparing metadata (pyproject.toml): finished with status 'done' 23:20:54 Building wheels for collected packages: omero_marshal 23:20:54 Building wheel for omero_marshal (pyproject.toml): started 23:20:55 Building wheel for omero_marshal (pyproject.toml): finished with status 'done' 23:20:55 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88121 sha256=4450d485e2df0e9101a46c9c22d8b574559bf0b6d439df049e1b2cf0342a885b 23:20:55 Stored in directory: /home/omero/.cache/pip/wheels/a4/f2/95/cb0485f5ab8317342e3c0c0088db9be0a3d5176163e4a30134 23:20:55 Successfully built omero_marshal 23:20:55 Installing collected packages: omero_marshal 23:20:55 Successfully installed omero_marshal-0.9.1.dev0 23:20:55 + for x in *.gz 23:20:55 + pip install omero_py-5.21.3.dev0.tar.gz 23:20:55 Processing ./omero_py-5.21.3.dev0.tar.gz 23:20:55 Installing build dependencies: started 23:20:56 Installing build dependencies: finished with status 'done' 23:20:56 Getting requirements to build wheel: started 23:20:56 Getting requirements to build wheel: finished with status 'done' 23:20:56 Preparing metadata (pyproject.toml): started 23:20:57 Preparing metadata (pyproject.toml): finished with status 'done' 23:20:57 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (1.4.4) 23:20:57 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (1.0.0) 23:20:57 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (2.3.5) 23:20:57 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (12.0.0) 23:20:57 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (6.0.3) 23:20:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (3.6.5) 23:20:57 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (2.32.5) 23:20:57 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.3.dev0) (3.2.0) 23:20:57 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.3.dev0) (3.4.4) 23:20:57 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.3.dev0) (3.11) 23:20:57 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.3.dev0) (2.5.0) 23:20:57 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.3.dev0) (2025.11.12) 23:20:57 Building wheels for collected packages: omero-py 23:20:57 Building wheel for omero-py (pyproject.toml): started 23:20:58 Building wheel for omero-py (pyproject.toml): finished with status 'done' 23:20:58 Created wheel for omero-py: filename=omero_py-5.21.3.dev0-py3-none-any.whl size=2785996 sha256=4eb3d7b35f3c0405f11a6245748b73aa1bb9ffd7e45e91b260dc6f4cbf3d8308 23:20:58 Stored in directory: /home/omero/.cache/pip/wheels/d4/f0/d2/fd094b01f60c957a7712809bc812127306aeaf19efdb1da68f 23:20:58 Successfully built omero-py 23:20:58 Installing collected packages: omero-py 23:20:58 Attempting uninstall: omero-py 23:20:58 Found existing installation: omero-py 5.21.2 23:20:58 Uninstalling omero-py-5.21.2: 23:20:59 Successfully uninstalled omero-py-5.21.2 23:21:00 Successfully installed omero-py-5.21.3.dev0 23:21:01 + for x in *.gz 23:21:01 + pip install omero_scripts-5.9.2.dev0.tar.gz 23:21:01 Processing ./omero_scripts-5.9.2.dev0.tar.gz 23:21:01 Installing build dependencies: started 23:21:02 Installing build dependencies: finished with status 'done' 23:21:02 Getting requirements to build wheel: started 23:21:02 Getting requirements to build wheel: finished with status 'done' 23:21:02 Preparing metadata (pyproject.toml): started 23:21:02 Preparing metadata (pyproject.toml): finished with status 'done' 23:21:02 Building wheels for collected packages: omero-scripts 23:21:02 Building wheel for omero-scripts (pyproject.toml): started 23:21:03 Building wheel for omero-scripts (pyproject.toml): finished with status 'done' 23:21:03 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136847 sha256=99c777e57160eb21647df03a57953045f80991d9c5e62c6b05cbbe75a6b2ded0 23:21:03 Stored in directory: /home/omero/.cache/pip/wheels/6c/06/35/0bc12bfe51e7f53c18a682ede8f5b472bca001e8bc51e8a022 23:21:03 Successfully built omero-scripts 23:21:03 Installing collected packages: omero-scripts 23:21:03 Successfully installed omero-scripts-5.9.2.dev0 23:21:03 + for x in *.gz 23:21:03 + pip install omero_web-5.29.3.dev0.tar.gz 23:21:03 Processing ./omero_web-5.29.3.dev0.tar.gz 23:21:03 Installing build dependencies: started 23:21:04 Installing build dependencies: finished with status 'done' 23:21:04 Getting requirements to build wheel: started 23:21:05 Getting requirements to build wheel: finished with status 'done' 23:21:05 Preparing metadata (pyproject.toml): started 23:21:05 Preparing metadata (pyproject.toml): finished with status 'done' 23:21:05 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (5.21.3.dev0) 23:21:05 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.29.3.dev0) 23:21:05 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB) 23:21:05 Collecting Django<5.3,>=4.2.25 (from omero-web==5.29.3.dev0) 23:21:05 Using cached django-5.2.8-py3-none-any.whl.metadata (4.1 kB) 23:21:05 Collecting django-pipeline (from omero-web==5.29.3.dev0) 23:21:05 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB) 23:21:05 Collecting django-cors-headers==3.7.0 (from omero-web==5.29.3.dev0) 23:21:05 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB) 23:21:05 Collecting django-csp (from omero-web==5.29.3.dev0) 23:21:05 Using cached django_csp-4.0-py3-none-any.whl.metadata (3.6 kB) 23:21:05 Collecting whitenoise>=5.3.0 (from omero-web==5.29.3.dev0) 23:21:05 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB) 23:21:06 Collecting gunicorn>=19.3 (from omero-web==5.29.3.dev0) 23:21:06 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB) 23:21:06 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.1.dev0) 23:21:06 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (12.0.0) 23:21:06 Collecting pytz (from omero-web==5.29.3.dev0) 23:21:06 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB) 23:21:06 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.2.0) 23:21:06 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (25.0) 23:21:06 Collecting importlib-resources (from omero-web==5.29.3.dev0) 23:21:06 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB) 23:21:06 Collecting asgiref>=3.8.1 (from Django<5.3,>=4.2.25->omero-web==5.29.3.dev0) 23:21:06 Using cached asgiref-3.10.0-py3-none-any.whl.metadata (9.3 kB) 23:21:06 Collecting sqlparse>=0.3.1 (from Django<5.3,>=4.2.25->omero-web==5.29.3.dev0) 23:21:06 Using cached sqlparse-0.5.3-py3-none-any.whl.metadata (3.9 kB) 23:21:06 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.4.4) 23:21:06 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.0.0) 23:21:06 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.3.5) 23:21:06 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (6.0.3) 23:21:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.6.5) 23:21:06 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.32.5) 23:21:06 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (80.9.0) 23:21:06 Collecting wheel (from django-pipeline->omero-web==5.29.3.dev0) 23:21:06 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB) 23:21:06 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.4.4) 23:21:06 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.11) 23:21:06 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.5.0) 23:21:06 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2025.11.12) 23:21:06 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB) 23:21:06 Using cached django-5.2.8-py3-none-any.whl (8.3 MB) 23:21:07 Using cached asgiref-3.10.0-py3-none-any.whl (24 kB) 23:21:07 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB) 23:21:07 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB) 23:21:07 Using cached sqlparse-0.5.3-py3-none-any.whl (44 kB) 23:21:07 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB) 23:21:07 Using cached django_csp-4.0-py3-none-any.whl (25 kB) 23:21:07 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB) 23:21:07 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB) 23:21:07 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB) 23:21:07 Using cached wheel-0.45.1-py3-none-any.whl (72 kB) 23:21:07 Building wheels for collected packages: omero-web 23:21:07 Building wheel for omero-web (pyproject.toml): started 23:21:08 Building wheel for omero-web (pyproject.toml): finished with status 'done' 23:21:08 Created wheel for omero-web: filename=omero_web-5.29.3.dev0-py3-none-any.whl size=2818328 sha256=545f970eabfd89b6b204475ce0e828a4e06cf4101b624c074a26f63250826797 23:21:08 Stored in directory: /home/omero/.cache/pip/wheels/e6/0c/d9/d1ea7a62b8942ac00dd1a69526e44763143251424f87ff479f 23:21:08 Successfully built omero-web 23:21:08 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-csp, django-cors-headers, omero-web 23:21:11 23:21:11 Successfully installed Django-5.2.8 asgiref-3.10.0 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-csp-4.0 django-pipeline-4.1.0 gunicorn-23.0.0 importlib-resources-6.5.2 omero-web-5.29.3.dev0 pytz-2025.2 sqlparse-0.5.3 wheel-0.45.1 whitenoise-6.11.0 23:21:11 + cd /home/omero/workspace/OMERO-training/OMERO.server 23:21:11 + ROOT_PASSWORD=omeroalecesky 23:21:11 + bash /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_setup.sh 23:21:11 + HOSTNAME=074fc45bf9e6 23:21:11 + PORT=4064 23:21:11 + WEBHOST=http://nginx/web 23:21:11 + SERVER_NAME=omero 23:21:11 + ROOT_PASSWORD=omeroalecesky 23:21:11 + GROUP_NAME=training_group 23:21:11 + GROUP_NAME_2=training_group-2 23:21:11 + USER_NAME=training_user 23:21:11 + USER_NAME_2=training_user-2 23:21:11 + LIGHTADMIN_USER_NAME=ladmin_user 23:21:11 + USER_PASSWORD=ome 23:21:11 + CONFIG_FILENAME=training_ice.config 23:21:11 + omero login root@074fc45bf9e6:4064 -w omeroalecesky 23:21:13 Ice.ConnectionRefusedException: 074fc45bf9e6:4064 isn't running 23:21:13 Build step 'Execute shell' marked build as failure 23:21:13 Finished: FAILURE