Started by upstream project "Trigger" build number 597
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 529
[Pipeline] sh
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.7.0-py3-none-any.whl (416 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.8.3-py3-none-any.whl (161 kB)
Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.1 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-25 00:37:08,082 [ scc.config] DEBUG Found github.token
2025-08-25 00:37:08,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:08,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:08,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:08,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:08,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:09,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-25 00:37:09,194 [ scc.gh] DEBUG 4862 remaining from 5000 (Reset at 01:08
2025-08-25 00:37:09,194 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:09,197 [ scc.git] DEBUG Check current status
2025-08-25 00:37:09,197 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:09,199 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-08-25 00:37:09,200 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:09,251 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-08-25 00:37:09,254 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-08-25 00:37:09,258 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-08-25 00:37:09,262 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-08-25 00:37:09,267 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-08-25 00:37:09,271 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-08-25 00:37:09,274 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-08-25 00:37:09,278 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-08-25 00:37:09,282 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-08-25 00:37:09,285 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-08-25 00:37:09,289 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-08-25 00:37:09,292 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-08-25 00:37:09,296 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-08-25 00:37:09,300 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-08-25 00:37:09,303 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-08-25 00:37:09,306 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-08-25 00:37:09,309 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-08-25 00:37:09,313 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-08-25 00:37:09,316 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-08-25 00:37:09,319 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-08-25 00:37:09,322 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-08-25 00:37:09,326 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-08-25 00:37:09,329 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:09,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:09,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-08-25 00:37:09,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:10,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:10,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:10,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:11,014 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:11,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:11,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:11,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:11,710 [ scc.git] DEBUG Resetting...
2025-08-25 00:37:11,710 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-25 00:37:11,718 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-08-25 00:37:11,719 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-25 00:37:11,833 [ scc.git] DEBUG Check current status
2025-08-25 00:37:11,833 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:11,836 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-08-25 00:37:11,836 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:11,885 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-08-25 00:37:11,889 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-08-25 00:37:11,892 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-08-25 00:37:11,896 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-08-25 00:37:11,901 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-08-25 00:37:11,904 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-08-25 00:37:11,907 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-08-25 00:37:11,911 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-08-25 00:37:11,914 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-08-25 00:37:11,918 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-08-25 00:37:11,921 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-08-25 00:37:11,924 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-08-25 00:37:11,928 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-08-25 00:37:11,931 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-08-25 00:37:11,935 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-08-25 00:37:11,938 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-08-25 00:37:11,941 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-08-25 00:37:11,944 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-08-25 00:37:11,947 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-08-25 00:37:11,950 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-08-25 00:37:11,953 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-08-25 00:37:11,957 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-08-25 00:37:11,958 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-25 00:37:11,958 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-25 00:37:11,958 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-25 00:37:11,958 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-25 00:37:11,959 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-25 00:37:11,959 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:37:11,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:12,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-08-25 00:37:12,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:12,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-08-25 00:37:12,857 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:37:12,857 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-25 00:37:13,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:13,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-08-25 00:37:13,397 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:37:13,397 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-25 00:37:13,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:13,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-08-25 00:37:13,912 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:37:13,912 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-25 00:37:13,912 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:37:13,912 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:37:13,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:37:13,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:37:13,917 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:37:13,917 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:37:13,920 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:37:13,923 [ scc.git] DEBUG Already up to date.
2025-08-25 00:37:13,923 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-08-25 00:37:14,205 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-08-25 00:37:14,205 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-08-25 00:37:14,213 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-08-25 00:37:14,493 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-08-25 00:37:14,493 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-08-25 00:37:14,501 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-08-25 00:37:14,772 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-08-25 00:37:14,772 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-08-25 00:37:14,780 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:37:14,780 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:37:14,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:37:14,782 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-08-25 00:37:14,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:37:14,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-08-25 00:37:14,805 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:37:14,808 [ scc.git] DEBUG scripts | 2 +-
2025-08-25 00:37:14,808 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:37:14,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:15,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:15,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-08-25 00:37:15,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:37:15,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-08-25 00:37:15,036 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:37:15,038 [ scc.git] DEBUG omero-figure | 2 +-
2025-08-25 00:37:15,038 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:37:15,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:15,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:15,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-08-25 00:37:15,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:37:15,469 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-08-25 00:37:15,487 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:37:15,489 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-08-25 00:37:15,489 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:37:15,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:15,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:15,903 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:37:15,973 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-08-25 00:37:16,004 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-08-25 00:37:16,021 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-08-25 00:37:16,022 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:37:16,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:37:16,024 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:37:16,118 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f964a29f390> has no local changes
2025-08-25 00:37:16,118 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:37:16,199 [ scc.git] DEBUG [detached HEAD 37c60de] merge master -Dorg -Snone
2025-08-25 00:37:16,200 [ scc.merge] INFO Repository: ome/omero-plugins
2025-08-25 00:37:16,200 [ scc.merge] INFO Already up to date.
2025-08-25 00:37:16,200 [ scc.merge] INFO
2025-08-25 00:37:16,200 [ scc.merge] INFO Merged PRs:
2025-08-25 00:37:16,200 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-25 00:37:16,200 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-25 00:37:16,200 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-25 00:37:16,200 [ scc.merge] INFO
2025-08-25 00:37:16,200 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-25 00:37:16,200 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out 'f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb'
Submodule path 'omero-figure': checked out 'd2c6f5bc061df1e02422728732b07ae7a929ccb2'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'scripts': checked out '573db340d5d1429fa17c7e486206948412a7c150'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-08-25 00:37:23,258 [ scc.config] DEBUG Found github.token
2025-08-25 00:37:23,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:23,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:23,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:23,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:37:24,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:24,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-25 00:37:24,379 [ scc.gh] DEBUG 4848 remaining from 5000 (Reset at 01:08
2025-08-25 00:37:24,380 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:24,382 [ scc.git] DEBUG Check current status
2025-08-25 00:37:24,382 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:24,385 [ scc.git] DEBUG 37c60de merge master -Dorg -Snone
2025-08-25 00:37:24,385 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:24,438 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-08-25 00:37:24,442 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-08-25 00:37:24,445 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-08-25 00:37:24,449 [ scc.git] DEBUG +f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb omero-cli-zarr (v0.6.1-1-gf7eea7c)
2025-08-25 00:37:24,454 [ scc.git] DEBUG +d2c6f5bc061df1e02422728732b07ae7a929ccb2 omero-figure (v7.2.1-14-gd2c6f5bc)
2025-08-25 00:37:24,458 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-08-25 00:37:24,461 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-08-25 00:37:24,467 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-08-25 00:37:24,470 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-08-25 00:37:24,474 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-08-25 00:37:24,478 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-08-25 00:37:24,481 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-08-25 00:37:24,485 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-08-25 00:37:24,488 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-08-25 00:37:24,492 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-08-25 00:37:24,495 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-08-25 00:37:24,498 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-08-25 00:37:24,501 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-08-25 00:37:24,505 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-08-25 00:37:24,508 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-08-25 00:37:24,511 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-08-25 00:37:24,515 [ scc.git] DEBUG +573db340d5d1429fa17c7e486206948412a7c150 scripts (v5.9.1-1-g573db34)
2025-08-25 00:37:24,518 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:24,518 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-08-25 00:37:24,520 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-08-25 00:37:24,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:24,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-08-25 00:37:25,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:25,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:25,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:25,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:26,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:26,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:26,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:26,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:26,894 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:26,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-25 00:37:26,979 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:26,981 [ scc.git] DEBUG Check current status
2025-08-25 00:37:26,981 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:26,984 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-08-25 00:37:26,984 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:27,027 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:27,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:27,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-08-25 00:37:27,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:27,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:28,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:28,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:28,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:28,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:29,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:29,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:29,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:29,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:29,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-25 00:37:29,390 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:29,392 [ scc.git] DEBUG Check current status
2025-08-25 00:37:29,392 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:29,395 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-08-25 00:37:29,395 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:29,437 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:29,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:29,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-08-25 00:37:30,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:30,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:30,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:30,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:31,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:31,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:31,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:31,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:31,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:31,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:31,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-25 00:37:31,863 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:31,865 [ scc.git] DEBUG Check current status
2025-08-25 00:37:31,865 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:31,868 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-08-25 00:37:31,868 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:31,911 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:32,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:32,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-08-25 00:37:32,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:32,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:33,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:33,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:33,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:33,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:34,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:34,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:34,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:34,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:34,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-25 00:37:34,354 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:34,356 [ scc.git] DEBUG Check current status
2025-08-25 00:37:34,356 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:34,359 [ scc.git] DEBUG f7eea7c Bump version: 0.6.1 → 0.6.2.dev0
2025-08-25 00:37:34,359 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:34,404 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:34,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:34,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-08-25 00:37:35,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:35,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:35,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:35,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:36,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:36,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:36,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:36,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:36,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:36,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:36,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-25 00:37:36,830 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:36,832 [ scc.git] DEBUG Check current status
2025-08-25 00:37:36,832 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:36,836 [ scc.git] DEBUG d2c6f5bc Merge pull request #638 from Rdornier/fix-arrow-opacity
2025-08-25 00:37:36,836 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:36,880 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:37,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:37,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-08-25 00:37:37,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:37,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:38,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:38,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:38,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:38,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:39,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:39,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:39,328 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:39,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:39,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-25 00:37:39,370 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:39,373 [ scc.git] DEBUG Check current status
2025-08-25 00:37:39,373 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:39,375 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-08-25 00:37:39,376 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:39,419 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:39,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:39,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-08-25 00:37:40,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:40,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:40,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:40,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:41,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:41,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:41,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:41,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:41,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:41,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:41,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-25 00:37:41,863 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:41,866 [ scc.git] DEBUG Check current status
2025-08-25 00:37:41,866 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:41,868 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-08-25 00:37:41,869 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:41,912 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:42,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:42,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-08-25 00:37:42,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:42,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:43,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:43,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:43,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:43,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:44,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:44,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:44,279 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:44,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:44,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-25 00:37:44,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:44,323 [ scc.git] DEBUG Check current status
2025-08-25 00:37:44,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:44,326 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-08-25 00:37:44,326 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:44,368 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:44,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:44,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-08-25 00:37:45,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:45,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:45,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:45,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:46,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:46,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:46,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:46,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:46,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:46,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:46,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-25 00:37:46,849 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:46,851 [ scc.git] DEBUG Check current status
2025-08-25 00:37:46,851 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:46,854 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-08-25 00:37:46,854 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:46,895 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:47,058 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:47,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-08-25 00:37:47,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:47,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:48,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:48,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:48,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:48,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:49,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:49,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:49,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:49,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:49,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-25 00:37:49,319 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:49,321 [ scc.git] DEBUG Check current status
2025-08-25 00:37:49,321 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:49,324 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-25 00:37:49,324 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:49,366 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:49,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:49,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-08-25 00:37:50,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:50,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:50,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:50,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:51,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:51,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:51,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:51,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:51,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:51,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:51,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-25 00:37:51,851 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:51,853 [ scc.git] DEBUG Check current status
2025-08-25 00:37:51,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:51,856 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-08-25 00:37:51,856 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:51,899 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:52,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:52,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-08-25 00:37:52,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:52,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:53,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:53,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:53,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:53,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:54,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:54,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:54,292 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:54,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:54,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-25 00:37:54,334 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:54,336 [ scc.git] DEBUG Check current status
2025-08-25 00:37:54,336 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:54,339 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-08-25 00:37:54,339 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:54,382 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:54,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:54,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-08-25 00:37:55,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:55,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:55,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:55,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:56,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:56,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:56,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:56,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:56,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:56,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:56,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-25 00:37:56,899 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:56,901 [ scc.git] DEBUG Check current status
2025-08-25 00:37:56,901 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:56,904 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-08-25 00:37:56,904 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:56,946 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:57,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:57,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-08-25 00:37:57,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:57,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:37:58,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:58,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:37:58,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:58,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:37:59,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:59,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:37:59,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:37:59,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:37:59,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-25 00:37:59,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:37:59,395 [ scc.git] DEBUG Check current status
2025-08-25 00:37:59,395 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:37:59,397 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-08-25 00:37:59,397 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:37:59,439 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:37:59,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:37:59,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-08-25 00:38:00,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:00,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:00,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:00,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:01,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:01,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:01,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:01,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:01,840 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:01,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:01,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-25 00:38:01,882 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:01,884 [ scc.git] DEBUG Check current status
2025-08-25 00:38:01,884 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:01,886 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2025-08-25 00:38:01,887 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:01,928 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:02,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:02,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-25 00:38:02,325 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-25 00:38:02,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:02,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-08-25 00:38:02,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:03,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:03,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:03,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:03,828 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:04,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:04,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:04,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:04,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:04,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:04,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-25 00:38:04,582 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:04,584 [ scc.git] DEBUG Check current status
2025-08-25 00:38:04,584 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:04,587 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-08-25 00:38:04,587 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:04,629 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:04,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:05,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-08-25 00:38:05,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:05,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:05,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:06,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:06,318 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:06,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:06,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:06,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:06,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:07,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:07,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-25 00:38:07,032 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:07,034 [ scc.git] DEBUG Check current status
2025-08-25 00:38:07,034 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:07,037 [ scc.git] DEBUG 160d894 Fix display of code
2025-08-25 00:38:07,037 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:07,079 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:07,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:07,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-08-25 00:38:07,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:08,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:08,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:08,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:08,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:09,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:09,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:09,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:09,506 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:09,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:09,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-25 00:38:09,547 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:09,549 [ scc.git] DEBUG Check current status
2025-08-25 00:38:09,549 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:09,552 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build
2025-08-25 00:38:09,552 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:09,594 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:09,594 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-08-25 00:38:09,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:10,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-08-25 00:38:10,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:10,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:10,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:11,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:11,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:11,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:11,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:11,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:11,994 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:12,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:12,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-25 00:38:12,036 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:12,038 [ scc.git] DEBUG Check current status
2025-08-25 00:38:12,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:12,041 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-08-25 00:38:12,041 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:12,083 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:12,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:12,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-25 00:38:12,486 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-25 00:38:12,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:12,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-08-25 00:38:13,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:13,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:13,574 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:13,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:14,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:14,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:14,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:14,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:14,804 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:14,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:14,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-25 00:38:14,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:14,849 [ scc.git] DEBUG Check current status
2025-08-25 00:38:14,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:14,851 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-08-25 00:38:14,852 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:14,893 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:15,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:15,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-25 00:38:15,282 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-25 00:38:15,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:15,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-08-25 00:38:15,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:16,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:16,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:16,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:16,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:17,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:17,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:17,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:17,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:17,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:17,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-25 00:38:17,614 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:17,616 [ scc.git] DEBUG Check current status
2025-08-25 00:38:17,616 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:17,619 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-08-25 00:38:17,619 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:17,661 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:17,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:18,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-08-25 00:38:18,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:18,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:18,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:19,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:19,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:19,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:19,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:20,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:20,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:20,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:20,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-25 00:38:20,074 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-25 00:38:20,077 [ scc.git] DEBUG Check current status
2025-08-25 00:38:20,077 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:20,079 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-25 00:38:20,080 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:20,121 [ scc.config] DEBUG Found remote.origin.url
2025-08-25 00:38:20,122 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-08-25 00:38:20,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:20,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-25 00:38:20,514 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-25 00:38:20,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:20,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-08-25 00:38:21,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:21,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-25 00:38:21,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:21,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-25 00:38:22,115 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:22,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-25 00:38:22,574 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:22,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-25 00:38:22,815 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:22,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:22,858 [ scc.git] DEBUG Resetting...
2025-08-25 00:38:22,858 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-25 00:38:22,866 [ scc.git] DEBUG HEAD is now at 37c60de merge master -Dorg -Snone
2025-08-25 00:38:22,867 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-25 00:38:22,932 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-08-25 00:38:22,954 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-08-25 00:38:22,978 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-08-25 00:38:22,995 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-08-25 00:38:23,026 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-08-25 00:38:23,056 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-08-25 00:38:23,060 [ scc.git] DEBUG Check current status
2025-08-25 00:38:23,060 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-25 00:38:23,063 [ scc.git] DEBUG 37c60de merge master -Dorg -Snone
2025-08-25 00:38:23,063 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-25 00:38:23,111 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-08-25 00:38:23,115 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-08-25 00:38:23,119 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-08-25 00:38:23,122 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-08-25 00:38:23,127 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-08-25 00:38:23,130 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-08-25 00:38:23,134 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-08-25 00:38:23,139 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-08-25 00:38:23,142 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-08-25 00:38:23,145 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-08-25 00:38:23,149 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-08-25 00:38:23,152 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-08-25 00:38:23,156 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-08-25 00:38:23,160 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-08-25 00:38:23,163 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-08-25 00:38:23,166 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-08-25 00:38:23,170 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-08-25 00:38:23,173 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-08-25 00:38:23,176 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-08-25 00:38:23,179 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-08-25 00:38:23,182 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-08-25 00:38:23,186 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-08-25 00:38:23,187 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-25 00:38:23,188 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-25 00:38:23,188 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-25 00:38:23,188 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-25 00:38:23,188 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-25 00:38:23,188 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-08-25 00:38:23,188 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:38:23,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:23,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-08-25 00:38:23,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:23,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-08-25 00:38:23,994 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:38:24,246 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:24,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-08-25 00:38:24,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:25,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:25,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:25,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-08-25 00:38:25,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:26,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:38:26,180 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-25 00:38:26,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:26,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-08-25 00:38:26,735 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:38:26,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:27,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-08-25 00:38:27,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:27,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:28,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:28,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-08-25 00:38:28,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:28,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:38:28,982 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-25 00:38:29,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:29,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-08-25 00:38:29,520 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:38:29,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:30,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-08-25 00:38:30,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:30,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:30,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:31,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-08-25 00:38:31,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:31,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:38:31,654 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-25 00:38:31,655 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:38:31,655 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:31,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:31,658 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:38:31,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:38:31,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:38:31,663 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:38:31,667 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:31,667 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-08-25 00:38:31,966 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-08-25 00:38:31,966 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-08-25 00:38:31,973 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-08-25 00:38:32,251 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-08-25 00:38:32,251 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-08-25 00:38:32,259 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-08-25 00:38:32,537 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-08-25 00:38:32,538 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-08-25 00:38:32,545 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:38:32,545 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:32,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:32,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-08-25 00:38:32,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:32,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-08-25 00:38:32,556 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:32,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:32,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:38:32,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-08-25 00:38:32,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:32,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-08-25 00:38:32,776 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:33,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:33,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:38:33,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-08-25 00:38:33,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:33,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-08-25 00:38:33,235 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:33,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:33,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:38:33,672 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:38:33,728 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:33,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:33,730 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:38:33,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:34,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-08-25 00:38:34,137 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:38:34,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-25 00:38:34,137 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:34,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:34,140 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:38:34,142 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:38:34,143 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:38:34,145 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:38:34,149 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:34,149 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:38:34,149 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:34,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:34,151 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:38:34,193 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:34,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:34,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:34,234 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:38:34,238 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a6faf10> has no local changes
2025-08-25 00:38:34,238 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:38:34,244 [ scc.git] DEBUG [detached HEAD 2c4aed7] merge master -Dorg -Ssuccess-only
2025-08-25 00:38:34,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:34,245 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:38:34,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:34,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-08-25 00:38:34,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:35,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-08-25 00:38:35,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:35,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-08-25 00:38:35,788 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:38:35,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-25 00:38:35,788 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:35,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:35,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:38:35,793 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:38:35,793 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:38:35,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:38:35,800 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:35,800 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:38:35,800 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:35,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:35,802 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:38:35,844 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:35,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:35,846 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:35,886 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:38:35,890 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693c3e0a10> has no local changes
2025-08-25 00:38:35,890 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:38:35,896 [ scc.git] DEBUG [detached HEAD 56bf8ba] merge master -Dorg -Ssuccess-only
2025-08-25 00:38:35,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:35,897 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:38:36,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:36,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-08-25 00:38:36,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:36,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-08-25 00:38:37,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:37,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-08-25 00:38:37,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:37,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:38,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:38,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-08-25 00:38:38,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:39,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:38:39,041 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-08-25 00:38:39,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:39,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-08-25 00:38:39,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:40,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-08-25 00:38:40,327 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:40,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-08-25 00:38:40,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:41,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:41,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:41,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:38:41,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:42,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-08-25 00:38:42,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:42,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:38:42,616 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-08-25 00:38:42,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:43,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-08-25 00:38:43,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:43,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-08-25 00:38:43,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:44,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-08-25 00:38:44,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:44,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:45,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:45,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:38:45,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:45,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-08-25 00:38:46,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:38:46,318 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-08-25 00:38:46,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:46,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-08-25 00:38:47,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:47,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-08-25 00:38:47,304 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:38:47,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-25 00:38:47,304 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:47,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:47,307 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:38:47,309 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:38:47,309 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:38:47,312 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:38:47,315 [ scc.git] DEBUG Already up to date.
2025-08-25 00:38:47,315 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-08-25 00:38:47,612 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-08-25 00:38:47,612 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-08-25 00:38:47,617 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-08-25 00:38:47,916 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-08-25 00:38:47,916 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-08-25 00:38:47,920 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-08-25 00:38:48,202 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-08-25 00:38:48,202 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-08-25 00:38:48,207 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:38:48,207 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:48,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:48,209 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-08-25 00:38:48,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:48,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-08-25 00:38:48,225 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:38:48,228 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-08-25 00:38:48,228 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-08-25 00:38:48,231 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:48,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:38:48,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-08-25 00:38:48,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:48,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-08-25 00:38:48,440 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-08-25 00:38:48,441 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:38:48,445 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-08-25 00:38:48,445 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-08-25 00:38:48,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:48,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:38:48,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-08-25 00:38:48,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:48,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-08-25 00:38:48,893 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-08-25 00:38:48,894 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:38:48,897 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-08-25 00:38:48,897 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-08-25 00:38:49,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:49,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:38:49,336 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:38:49,377 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:38:49,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:38:49,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:38:49,419 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:38:49,423 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a597910> has no local changes
2025-08-25 00:38:49,423 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:38:49,430 [ scc.git] DEBUG [detached HEAD 2160dab] merge master -Dorg -Ssuccess-only
2025-08-25 00:38:49,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:38:49,430 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:38:49,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:49,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-08-25 00:38:50,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:50,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180 HTTP/1.1" 200 None
2025-08-25 00:38:50,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:50,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/180/comments HTTP/1.1" 200 None
2025-08-25 00:38:51,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:51,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/d800b9b75e75c8f51e7a9f14e2c006d7977b44a6 HTTP/1.1" 200 None
2025-08-25 00:38:51,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:52,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/d800b9b75e75c8f51e7a9f14e2c006d7977b44a6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:52,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:52,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/d800b9b75e75c8f51e7a9f14e2c006d7977b44a6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:38:52,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:53,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-08-25 00:38:53,396 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:53,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-08-25 00:38:53,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:54,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:54,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:54,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:38:55,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:55,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-08-25 00:38:55,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:55,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-08-25 00:38:55,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:56,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-08-25 00:38:56,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:56,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-08-25 00:38:56,769 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-08-25 00:38:57,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:57,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-08-25 00:38:57,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:57,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-08-25 00:38:58,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:58,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-08-25 00:38:58,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:58,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-08-25 00:38:59,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:59,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/2407fc0352ef79e65b8de0fd481946c55cad3974 HTTP/1.1" 200 None
2025-08-25 00:38:59,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:38:59,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/2407fc0352ef79e65b8de0fd481946c55cad3974/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:00,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:00,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/2407fc0352ef79e65b8de0fd481946c55cad3974/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:00,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:01,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-08-25 00:39:01,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:01,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-08-25 00:39:01,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:02,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-08-25 00:39:02,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:02,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-08-25 00:39:02,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:03,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-08-25 00:39:03,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:03,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-08-25 00:39:03,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:04,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-08-25 00:39:04,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:04,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-08-25 00:39:04,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:05,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-08-25 00:39:05,230 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:39:05,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-25 00:39:05,230 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:05,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:05,233 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:39:05,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:39:05,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:39:05,240 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:39:05,254 [ scc.git] DEBUG Updating 11d3587..f7eea7c
2025-08-25 00:39:05,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:05,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-08-25 00:39:06,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:06,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-08-25 00:39:06,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:07,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-08-25 00:39:07,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:08,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-08-25 00:39:08,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:08,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-08-25 00:39:09,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:09,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-08-25 00:39:09,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:10,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-08-25 00:39:10,162 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-08-25 00:39:10,463 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-08-25 00:39:10,463 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-08-25 00:39:10,467 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:39:10,467 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:10,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:10,469 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-08-25 00:39:10,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:10,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-08-25 00:39:10,485 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:10,489 [ scc.git] DEBUG CHANGELOG.md | 4 ++--
2025-08-25 00:39:10,489 [ scc.git] DEBUG src/omero_zarr/masks.py | 11 +++++------
2025-08-25 00:39:10,489 [ scc.git] DEBUG test/integration/clitest/test_export.py | 32 ++++++++++++++++++--------------
2025-08-25 00:39:10,489 [ scc.git] DEBUG 3 files changed, 25 insertions(+), 22 deletions(-)
2025-08-25 00:39:10,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:10,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:10,706 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:39:10,748 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:10,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:10,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:39:10,790 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:39:10,794 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a80b650> has no local changes
2025-08-25 00:39:10,794 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 180 will-moore 'Register command' (status: failure)
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:39:10,801 [ scc.git] DEBUG [detached HEAD aaff0b1] merge master -Dorg -Ssuccess-only
2025-08-25 00:39:10,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:39:10,802 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:39:10,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:11,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-08-25 00:39:11,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:11,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-08-25 00:39:12,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:12,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-08-25 00:39:12,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:12,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/639 HTTP/1.1" 200 None
2025-08-25 00:39:12,947 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:39:13,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:13,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None
2025-08-25 00:39:13,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:14,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:14,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:14,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:15,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:15,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea5d315d21af32b6ce5529e86b939672d110c8cf HTTP/1.1" 200 None
2025-08-25 00:39:15,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:15,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea5d315d21af32b6ce5529e86b939672d110c8cf?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:15,726 [ scc.repo] DEBUG - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-08-25 00:39:15,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:16,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-08-25 00:39:16,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:16,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-08-25 00:39:16,782 [ scc.repo] DEBUG # ... Include label: include
2025-08-25 00:39:17,033 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:17,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None
2025-08-25 00:39:17,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:17,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:18,217 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:18,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d15ebc233eb1b3e235bad4fe780e78c80339f39e HTTP/1.1" 200 None
2025-08-25 00:39:18,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d15ebc233eb1b3e235bad4fe780e78c80339f39e?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:19,038 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-08-25 00:39:19,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:19,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None
2025-08-25 00:39:19,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:20,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None
2025-08-25 00:39:20,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:20,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-08-25 00:39:20,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:21,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:21,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:21,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:21,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:22,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-08-25 00:39:22,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:22,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:22,718 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-08-25 00:39:22,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:23,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-08-25 00:39:23,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:23,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None
2025-08-25 00:39:24,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:24,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None
2025-08-25 00:39:24,312 [ scc.repo] DEBUG # ... Include label: include
2025-08-25 00:39:24,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:24,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None
2025-08-25 00:39:25,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:25,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:25,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:25,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/83df5184c9424f29b3f8b578d50a0e9d0be3c363 HTTP/1.1" 200 None
2025-08-25 00:39:26,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:26,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/83df5184c9424f29b3f8b578d50a0e9d0be3c363?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:26,495 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border'
2025-08-25 00:39:26,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:26,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None
2025-08-25 00:39:27,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:27,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None
2025-08-25 00:39:27,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:28,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-08-25 00:39:28,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:28,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:28,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:29,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:29,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:29,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-08-25 00:39:29,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:30,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:30,103 [ scc.repo] DEBUG - PR 612 will-moore 'Script version'
2025-08-25 00:39:30,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:30,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-08-25 00:39:30,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:31,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-08-25 00:39:31,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:31,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-08-25 00:39:31,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:32,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:32,496 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:32,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:33,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:33,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-08-25 00:39:33,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:33,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:33,816 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-08-25 00:39:34,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:34,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None
2025-08-25 00:39:34,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:34,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605/comments HTTP/1.1" 200 None
2025-08-25 00:39:35,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:35,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None
2025-08-25 00:39:35,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:35,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:36,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:36,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:36,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:36,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8996880bb97573423561afaca6de24e03ec57895 HTTP/1.1" 200 None
2025-08-25 00:39:37,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:37,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8996880bb97573423561afaca6de24e03ec57895?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:37,462 [ scc.repo] DEBUG - PR 605 Tom-TBT 'Colorbar feature'
2025-08-25 00:39:37,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:37,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-08-25 00:39:38,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:38,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-08-25 00:39:38,511 [ scc.repo] DEBUG # ... Include label: include
2025-08-25 00:39:38,760 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:39,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None
2025-08-25 00:39:39,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:39,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:39,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:40,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25 HTTP/1.1" 200 None
2025-08-25 00:39:40,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:40,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:40,602 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-08-25 00:39:40,602 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:39:40,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-25 00:39:40,603 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:40,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:40,606 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:39:40,609 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:39:40,609 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:39:40,613 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:39:40,629 [ scc.git] DEBUG Updating 9cc36cde..d2c6f5bc
2025-08-25 00:39:40,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:41,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-08-25 00:39:41,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:42,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-08-25 00:39:42,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:42,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-08-25 00:39:42,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:43,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-08-25 00:39:43,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:44,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-08-25 00:39:44,199 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-08-25 00:39:44,485 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:44,486 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-08-25 00:39:44,490 [ scc.git] DEBUG Calling 'git fetch origin pull/605/head'
2025-08-25 00:39:44,774 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:44,774 [ scc.git] DEBUG * branch refs/pull/605/head -> FETCH_HEAD
2025-08-25 00:39:44,779 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-08-25 00:39:45,059 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:45,059 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-08-25 00:39:45,064 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-08-25 00:39:45,341 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:45,341 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-08-25 00:39:45,346 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-08-25 00:39:45,631 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:45,631 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-08-25 00:39:45,636 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head'
2025-08-25 00:39:45,910 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:45,910 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD
2025-08-25 00:39:45,915 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-08-25 00:39:46,194 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:46,194 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-08-25 00:39:46,199 [ scc.git] DEBUG Calling 'git fetch origin pull/639/head'
2025-08-25 00:39:46,480 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-08-25 00:39:46,480 [ scc.git] DEBUG * branch refs/pull/639/head -> FETCH_HEAD
2025-08-25 00:39:46,485 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:39:46,485 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:46,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:46,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25'
2025-08-25 00:39:46,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:46,497 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) 54a4f3a7eb3dea1cecfdd5b9d7a286654bd78f25'
2025-08-25 00:39:46,517 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:46,528 [ scc.git] DEBUG .gitignore | 2 +
2025-08-25 00:39:46,528 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/css/figure.css | 20 +-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/index.html | 34 +-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 208 +++++-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shape_editor/line.js | 215 +++++-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shape_editor/point.js | 203 +++++-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 207 +++++-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shape_editor/rect.js | 212 +++++-
2025-08-25 00:39:46,528 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 411 ++++++++++-
2025-08-25 00:39:46,529 [ scc.git] DEBUG src/js/shape_editor/text.js | 754 +++++++++++++++++++++
2025-08-25 00:39:46,529 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-08-25 00:39:46,529 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++-
2025-08-25 00:39:46,529 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-08-25 00:39:46,529 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 182 ++++-
2025-08-25 00:39:46,531 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-08-25 00:39:46,531 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-08-25 00:39:46,531 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-08-25 00:39:46,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:46,531 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 +++++++----
2025-08-25 00:39:46,531 [ scc.git] DEBUG 22 files changed, 3249 insertions(+), 225 deletions(-)
2025-08-25 00:39:46,531 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-08-25 00:39:46,531 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-08-25 00:39:46,531 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-08-25 00:39:46,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:46,732 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8996880bb97573423561afaca6de24e03ec57895'
2025-08-25 00:39:46,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:46,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 605 (Colorbar feature) 8996880bb97573423561afaca6de24e03ec57895'
2025-08-25 00:39:46,776 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-08-25 00:39:46,776 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-08-25 00:39:46,776 [ scc.git] DEBUG Auto-merging src/index.html
2025-08-25 00:39:46,776 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2025-08-25 00:39:46,776 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-08-25 00:39:46,776 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-08-25 00:39:46,777 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:46,784 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 392 +++++++++++++++++++--
2025-08-25 00:39:46,784 [ scc.git] DEBUG src/css/figure.css | 133 ++++++-
2025-08-25 00:39:46,784 [ scc.git] DEBUG src/index.html | 4 +
2025-08-25 00:39:46,784 [ scc.git] DEBUG src/js/models/panel_model.js | 169 +++++++--
2025-08-25 00:39:46,784 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 +++++++
2025-08-25 00:39:46,784 [ scc.git] DEBUG src/js/views/lutpicker.js | 67 ++--
2025-08-25 00:39:46,784 [ scc.git] DEBUG src/js/views/panel_view.js | 79 ++++-
2025-08-25 00:39:46,785 [ scc.git] DEBUG src/js/views/right_panel_view.js | 13 +
2025-08-25 00:39:46,785 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 +++
2025-08-25 00:39:46,785 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 +++++++
2025-08-25 00:39:46,785 [ scc.git] DEBUG 10 files changed, 1080 insertions(+), 80 deletions(-)
2025-08-25 00:39:46,785 [ scc.git] DEBUG create mode 100644 src/js/views/colorbar_form_view.js
2025-08-25 00:39:46,785 [ scc.git] DEBUG create mode 100644 src/templates/colorbar.template.html
2025-08-25 00:39:46,785 [ scc.git] DEBUG create mode 100644 src/templates/colorbar_form.template.html
2025-08-25 00:39:46,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:47,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:47,192 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-08-25 00:39:47,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:47,202 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-08-25 00:39:47,220 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:47,224 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-08-25 00:39:47,224 [ scc.git] DEBUG README.rst | 4 +-
2025-08-25 00:39:47,225 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-08-25 00:39:47,225 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-08-25 00:39:47,225 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-08-25 00:39:47,225 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-08-25 00:39:47,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:47,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:47,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-08-25 00:39:47,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:47,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-08-25 00:39:47,710 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-08-25 00:39:47,710 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:39:47,710 [ scc.git] DEBUG Auto-merging package.json
2025-08-25 00:39:47,710 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-08-25 00:39:47,710 [ scc.git] DEBUG Auto-merging src/index.html
2025-08-25 00:39:47,711 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:47,719 [ scc.git] DEBUG .bumpversion.cfg | 2 +
2025-08-25 00:39:47,719 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +-
2025-08-25 00:39:47,719 [ scc.git] DEBUG omero_figure/urls.py | 3 +
2025-08-25 00:39:47,719 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++
2025-08-25 00:39:47,719 [ scc.git] DEBUG package-lock.json | 8 +-
2025-08-25 00:39:47,719 [ scc.git] DEBUG package.json | 3 +-
2025-08-25 00:39:47,719 [ scc.git] DEBUG src/css/figure.css | 2 +-
2025-08-25 00:39:47,719 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++
2025-08-25 00:39:47,719 [ scc.git] DEBUG src/index.html | 20 +++--
2025-08-25 00:39:47,719 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++
2025-08-25 00:39:47,719 [ scc.git] DEBUG vite.config.js | 3 +
2025-08-25 00:39:47,719 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-)
2025-08-25 00:39:47,719 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html
2025-08-25 00:39:47,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:48,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:48,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83df5184c9424f29b3f8b578d50a0e9d0be3c363'
2025-08-25 00:39:48,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:48,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 83df5184c9424f29b3f8b578d50a0e9d0be3c363'
2025-08-25 00:39:48,151 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-08-25 00:39:48,151 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2025-08-25 00:39:48,151 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-08-25 00:39:48,151 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/panel_view.js
2025-08-25 00:39:48,152 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:39:48,152 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:39:48,157 [ scc.git] DEBUG Calling 'git reset --hard c75cbf7e3619bb614d54b8b9c6beaea47c507845'
2025-08-25 00:39:48,164 [ scc.git] DEBUG HEAD is now at c75cbf7e merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-08-25 00:39:48,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:48,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:48,566 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 83df5184c9424f29b3f8b578d50a0e9d0be3c363'
2025-08-25 00:39:48,570 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2'
2025-08-25 00:39:48,573 [ scc.git] INFO - PR 616 Rdornier 'Fix labels around border'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/panel_view.js
- PR #605 Tom-TBT 'Colorbar feature'
- src/js/views/panel_view.js
--conflicts
2025-08-25 00:39:48,575 [ scc.config] DEBUG Found github.token
2025-08-25 00:39:48,575 [ scc.git] DEBUG Not adding comment to issue #616, already --conflicts.
2025-08-25 00:39:48,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29'
2025-08-25 00:39:48,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:48,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-08-25 00:39:48,604 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-08-25 00:39:48,604 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js
2025-08-25 00:39:48,605 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:39:48,605 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:39:48,610 [ scc.git] DEBUG Calling 'git reset --hard c75cbf7e3619bb614d54b8b9c6beaea47c507845'
2025-08-25 00:39:48,618 [ scc.git] DEBUG HEAD is now at c75cbf7e merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-08-25 00:39:48,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:49,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:49,024 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-08-25 00:39:49,028 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..d2c6f5bc061df1e02422728732b07ae7a929ccb2'
2025-08-25 00:39:49,032 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/right_panel_view.js
- PR #605 Tom-TBT 'Colorbar feature'
- src/js/views/right_panel_view.js
--conflicts
2025-08-25 00:39:49,034 [ scc.config] DEBUG Found github.token
2025-08-25 00:39:49,034 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts.
2025-08-25 00:39:49,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d15ebc233eb1b3e235bad4fe780e78c80339f39e'
2025-08-25 00:39:49,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:49,045 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) d15ebc233eb1b3e235bad4fe780e78c80339f39e'
2025-08-25 00:39:49,070 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-08-25 00:39:49,070 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-08-25 00:39:49,070 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-08-25 00:39:49,070 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-08-25 00:39:49,070 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-08-25 00:39:49,070 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:39:49,071 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:39:49,075 [ scc.git] DEBUG Calling 'git reset --hard c75cbf7e3619bb614d54b8b9c6beaea47c507845'
2025-08-25 00:39:49,083 [ scc.git] DEBUG HEAD is now at c75cbf7e merge master -Dorg -Ssuccess-only: PR 612 (Script version)
2025-08-25 00:39:49,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:49,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:49,498 [ scc.git] DEBUG Calling 'git merge-base d2c6f5bc061df1e02422728732b07ae7a929ccb2 d15ebc233eb1b3e235bad4fe780e78c80339f39e'
2025-08-25 00:39:49,502 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..d2c6f5bc061df1e02422728732b07ae7a929ccb2'
2025-08-25 00:39:49,506 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-08-25 00:39:49,508 [ scc.config] DEBUG Found github.token
2025-08-25 00:39:49,508 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-08-25 00:39:49,508 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea5d315d21af32b6ce5529e86b939672d110c8cf'
2025-08-25 00:39:49,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:49,518 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 639 (Bump vite from 6.2.6 to 6.2.7) ea5d315d21af32b6ce5529e86b939672d110c8cf'
2025-08-25 00:39:49,536 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:39:49,536 [ scc.git] DEBUG Auto-merging package.json
2025-08-25 00:39:49,537 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:49,541 [ scc.git] DEBUG package-lock.json | 8 ++++----
2025-08-25 00:39:49,542 [ scc.git] DEBUG package.json | 2 +-
2025-08-25 00:39:49,542 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2025-08-25 00:39:49,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:49,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:49,961 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:39:50,003 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:50,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:50,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:39:50,047 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:39:50,053 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a55ac50> has no local changes
2025-08-25 00:39:50,053 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:39:50,062 [ scc.git] DEBUG [detached HEAD 3af6521f] merge master -Dorg -Ssuccess-only
2025-08-25 00:39:50,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:39:50,062 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:39:50,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:50,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-08-25 00:39:50,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:51,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-08-25 00:39:51,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:51,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-08-25 00:39:51,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:52,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-08-25 00:39:52,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:52,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:52,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:53,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-08-25 00:39:53,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:53,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:53,661 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-08-25 00:39:53,661 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:39:53,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-25 00:39:53,661 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:53,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:53,664 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:39:53,666 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:39:53,666 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:39:53,669 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:39:53,672 [ scc.git] DEBUG Already up to date.
2025-08-25 00:39:53,673 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-08-25 00:39:53,969 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-08-25 00:39:53,969 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-08-25 00:39:53,974 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:39:53,974 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:53,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:53,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-08-25 00:39:53,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:53,982 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-08-25 00:39:53,990 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-08-25 00:39:53,991 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:39:53,994 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-08-25 00:39:53,994 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-08-25 00:39:53,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:54,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:39:54,213 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:39:54,254 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:39:54,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:39:54,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:39:54,297 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:39:54,301 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a809590> has no local changes
2025-08-25 00:39:54,301 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:39:54,307 [ scc.git] DEBUG [detached HEAD d6a0419] merge master -Dorg -Ssuccess-only
2025-08-25 00:39:54,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:39:54,308 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:39:54,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:54,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-08-25 00:39:55,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:55,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-08-25 00:39:55,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:55,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-08-25 00:39:56,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:56,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-08-25 00:39:56,399 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:39:56,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:57,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-08-25 00:39:57,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:57,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:39:57,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:58,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:39:58,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:58,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-08-25 00:39:59,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:59,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:39:59,256 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-08-25 00:39:59,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:39:59,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-08-25 00:40:00,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:00,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-08-25 00:40:00,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:00,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-08-25 00:40:00,965 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:01,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:01,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-08-25 00:40:01,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:02,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:02,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:02,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:02,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:03,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-08-25 00:40:03,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:03,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:03,650 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-08-25 00:40:03,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:04,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-08-25 00:40:04,195 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:04,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:04,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-08-25 00:40:05,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:05,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:05,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:05,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:06,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:06,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-08-25 00:40:06,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:07,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:07,098 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-08-25 00:40:07,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:07,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-08-25 00:40:07,589 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:07,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:08,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-08-25 00:40:08,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:08,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:08,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:09,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:09,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:09,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-08-25 00:40:10,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:10,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:10,268 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-08-25 00:40:10,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:10,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-08-25 00:40:11,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:11,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-08-25 00:40:11,352 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:11,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:11,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-08-25 00:40:12,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:12,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:12,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:13,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:13,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:13,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-08-25 00:40:14,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:14,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:14,243 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-08-25 00:40:14,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:14,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-08-25 00:40:14,743 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:14,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:15,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-08-25 00:40:15,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:15,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:16,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:16,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:16,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:16,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-08-25 00:40:17,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:17,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:17,423 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-08-25 00:40:17,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:17,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-08-25 00:40:17,934 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:18,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:18,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-08-25 00:40:18,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:19,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:19,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:19,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:19,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:20,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-08-25 00:40:20,537 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:20,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:20,818 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-08-25 00:40:20,818 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:40:20,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-25 00:40:20,819 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:20,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:20,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:40:20,824 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:40:20,824 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:40:20,827 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:40:20,830 [ scc.git] DEBUG Already up to date.
2025-08-25 00:40:20,830 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-08-25 00:40:21,151 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:21,151 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-08-25 00:40:21,156 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-08-25 00:40:21,440 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:21,440 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-08-25 00:40:21,445 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-08-25 00:40:21,729 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:21,729 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-08-25 00:40:21,734 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-08-25 00:40:22,007 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:22,007 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-08-25 00:40:22,011 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-08-25 00:40:22,283 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:22,283 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-08-25 00:40:22,288 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-08-25 00:40:22,567 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:22,567 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-08-25 00:40:22,572 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-08-25 00:40:22,850 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-08-25 00:40:22,850 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-08-25 00:40:22,856 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:40:22,856 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:22,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:22,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-08-25 00:40:22,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:22,863 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-08-25 00:40:22,873 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:22,878 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-08-25 00:40:22,878 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-08-25 00:40:22,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:23,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:23,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-08-25 00:40:23,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:23,082 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-08-25 00:40:23,098 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:23,099 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:23,105 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-08-25 00:40:23,105 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-08-25 00:40:23,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:23,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:23,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-08-25 00:40:23,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:23,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-08-25 00:40:23,592 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:23,592 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-08-25 00:40:23,592 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:40:23,593 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:40:23,595 [ scc.git] DEBUG Calling 'git reset --hard 448af1c74a41f5535ce393e759dace0c18f0857c'
2025-08-25 00:40:23,601 [ scc.git] DEBUG HEAD is now at 448af1c merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-08-25 00:40:23,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:24,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:24,038 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-08-25 00:40:24,041 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-08-25 00:40:24,044 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-08-25 00:40:24,046 [ scc.config] DEBUG Found github.token
2025-08-25 00:40:24,046 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-08-25 00:40:24,046 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-08-25 00:40:24,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:24,051 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-08-25 00:40:24,068 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:24,069 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:24,074 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-08-25 00:40:24,074 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-08-25 00:40:24,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:24,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:24,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-08-25 00:40:24,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:24,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-08-25 00:40:24,533 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:24,534 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:24,539 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-08-25 00:40:24,539 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-08-25 00:40:24,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:24,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:24,961 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-08-25 00:40:24,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:24,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-08-25 00:40:24,983 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:24,983 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-08-25 00:40:24,983 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:40:24,984 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:40:24,986 [ scc.git] DEBUG Calling 'git reset --hard 6407c659bd9714af1eadde04e622f339e2311f20'
2025-08-25 00:40:24,991 [ scc.git] DEBUG HEAD is now at 6407c65 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-08-25 00:40:25,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:25,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:25,417 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-08-25 00:40:25,420 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-08-25 00:40:25,423 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-08-25 00:40:25,425 [ scc.config] DEBUG Found github.token
2025-08-25 00:40:25,425 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-08-25 00:40:25,425 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-08-25 00:40:25,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:25,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-08-25 00:40:25,449 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:25,449 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-08-25 00:40:25,449 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:40:25,450 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:40:25,452 [ scc.git] DEBUG Calling 'git reset --hard 6407c659bd9714af1eadde04e622f339e2311f20'
2025-08-25 00:40:25,457 [ scc.git] DEBUG HEAD is now at 6407c65 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-08-25 00:40:25,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:25,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:25,903 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-08-25 00:40:25,906 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-08-25 00:40:25,909 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-08-25 00:40:25,911 [ scc.config] DEBUG Found github.token
2025-08-25 00:40:25,911 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-08-25 00:40:25,911 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:40:25,953 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:25,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:25,955 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:40:25,995 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:40:26,000 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693aa60110> has no local changes
2025-08-25 00:40:26,000 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:40:26,008 [ scc.git] DEBUG [detached HEAD 1882b93] merge master -Dorg -Ssuccess-only
2025-08-25 00:40:26,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:40:26,008 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:40:26,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:26,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-08-25 00:40:26,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:27,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-08-25 00:40:27,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:27,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-08-25 00:40:27,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:28,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-08-25 00:40:28,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:28,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-08-25 00:40:28,610 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:28,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:29,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-08-25 00:40:29,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:29,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:30,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:30,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:30,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:30,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-08-25 00:40:31,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:31,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:31,418 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-08-25 00:40:31,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:31,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-08-25 00:40:31,942 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:40:32,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:32,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-08-25 00:40:32,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:33,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:33,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:33,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:33,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:34,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-08-25 00:40:34,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:34,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:34,766 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-08-25 00:40:35,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:35,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-08-25 00:40:35,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:35,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-08-25 00:40:36,010 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:36,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-08-25 00:40:36,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:36,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-08-25 00:40:37,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:37,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-08-25 00:40:37,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:37,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:38,104 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:38,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-08-25 00:40:38,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:38,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:38,889 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-08-25 00:40:39,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:39,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-08-25 00:40:39,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:39,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-08-25 00:40:40,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:40,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-08-25 00:40:40,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:41,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:41,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:41,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-08-25 00:40:41,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:42,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:42,047 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-08-25 00:40:42,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:42,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-08-25 00:40:42,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:43,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-08-25 00:40:43,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:43,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-08-25 00:40:43,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:44,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:44,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:44,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-08-25 00:40:44,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:45,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:45,188 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-08-25 00:40:45,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:45,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-08-25 00:40:45,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:46,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-08-25 00:40:46,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:46,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-08-25 00:40:47,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:47,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:47,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:47,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:40:47,893 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:40:47,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-25 00:40:47,893 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:47,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:47,896 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:40:47,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:40:47,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:40:47,902 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:40:47,910 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-08-25 00:40:48,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:48,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-08-25 00:40:48,625 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-08-25 00:40:48,914 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-08-25 00:40:48,914 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-08-25 00:40:48,918 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-08-25 00:40:49,197 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-08-25 00:40:49,197 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-08-25 00:40:49,201 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-08-25 00:40:49,487 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-08-25 00:40:49,488 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-08-25 00:40:49,492 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-08-25 00:40:49,774 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-08-25 00:40:49,774 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-08-25 00:40:49,778 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-08-25 00:40:50,056 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-08-25 00:40:50,056 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-08-25 00:40:50,060 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:40:50,060 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:50,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:50,063 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-08-25 00:40:50,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:50,072 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-08-25 00:40:50,085 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-08-25 00:40:50,086 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-08-25 00:40:50,087 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:50,091 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-08-25 00:40:50,091 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-08-25 00:40:50,091 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-08-25 00:40:50,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:50,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:50,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-08-25 00:40:50,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:50,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-08-25 00:40:50,325 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-08-25 00:40:50,325 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-08-25 00:40:50,325 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-08-25 00:40:50,325 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-08-25 00:40:50,326 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:50,331 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-08-25 00:40:50,331 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-08-25 00:40:50,332 [ scc.git] DEBUG src/app/header.html | 5 +
2025-08-25 00:40:50,332 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-08-25 00:40:50,332 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-08-25 00:40:50,332 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-08-25 00:40:50,332 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-08-25 00:40:50,332 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-08-25 00:40:50,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:50,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:50,744 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-08-25 00:40:50,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:50,752 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-08-25 00:40:50,767 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-08-25 00:40:50,768 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:50,771 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-08-25 00:40:50,771 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-08-25 00:40:50,771 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-08-25 00:40:50,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:51,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:51,194 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-08-25 00:40:51,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:51,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-08-25 00:40:51,220 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:51,231 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-08-25 00:40:51,231 [ scc.git] DEBUG package.json | 2 +-
2025-08-25 00:40:51,231 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-08-25 00:40:51,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:51,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:51,638 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-08-25 00:40:51,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:51,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-08-25 00:40:51,685 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:40:51,685 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-08-25 00:40:51,686 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:40:51,686 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:40:51,689 [ scc.git] DEBUG Calling 'git reset --hard cdce06c68c88e39b30d3b43979adf4df3b754149'
2025-08-25 00:40:51,697 [ scc.git] DEBUG HEAD is now at cdce06c merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-08-25 00:40:51,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:52,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:52,146 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-08-25 00:40:52,149 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-08-25 00:40:52,152 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-08-25 00:40:52,155 [ scc.config] DEBUG Found github.token
2025-08-25 00:40:52,155 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-08-25 00:40:52,155 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:40:52,197 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:52,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:52,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:40:52,241 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:40:52,248 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a5e0dd0> has no local changes
2025-08-25 00:40:52,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:40:52,255 [ scc.git] DEBUG [detached HEAD a8111b8] merge master -Dorg -Ssuccess-only
2025-08-25 00:40:52,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:40:52,256 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:40:52,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:52,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-08-25 00:40:52,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:53,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-08-25 00:40:53,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:53,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-08-25 00:40:53,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:54,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:54,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:54,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-08-25 00:40:54,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:55,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:55,185 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:40:55,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:55,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-08-25 00:40:55,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:56,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-08-25 00:40:56,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:56,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-25 00:40:57,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:57,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:40:57,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:57,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-25 00:40:58,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:58,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:40:58,358 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-08-25 00:40:58,358 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:40:58,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-25 00:40:58,358 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:58,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:58,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:40:58,364 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:40:58,364 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:40:58,367 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:40:58,370 [ scc.git] DEBUG Already up to date.
2025-08-25 00:40:58,370 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-08-25 00:40:58,656 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-25 00:40:58,656 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-08-25 00:40:58,661 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-08-25 00:40:58,934 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-25 00:40:58,934 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-08-25 00:40:58,939 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:40:58,939 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:58,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:58,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-25 00:40:58,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:58,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-25 00:40:58,957 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:58,961 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-08-25 00:40:58,961 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-08-25 00:40:58,961 [ scc.git] DEBUG requirements.txt | 2 +-
2025-08-25 00:40:58,961 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-08-25 00:40:58,961 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-08-25 00:40:58,961 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-08-25 00:40:58,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:59,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:59,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-25 00:40:59,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:59,161 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-25 00:40:59,170 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:40:59,173 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-25 00:40:59,173 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:40:59,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:40:59,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:40:59,606 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:40:59,648 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:40:59,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:40:59,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:40:59,693 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:40:59,697 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a558950> has no local changes
2025-08-25 00:40:59,697 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:40:59,704 [ scc.git] DEBUG [detached HEAD 5412bbb] merge master -Dorg -Ssuccess-only
2025-08-25 00:40:59,705 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:40:59,705 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:40:59,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:00,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-08-25 00:41:00,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:00,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-08-25 00:41:00,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:01,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-08-25 00:41:01,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:01,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-25 00:41:02,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:02,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:02,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:02,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-25 00:41:03,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:03,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:03,358 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-25 00:41:03,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:03,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-08-25 00:41:04,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:04,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-08-25 00:41:04,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:04,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-25 00:41:05,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:05,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:05,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:06,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-25 00:41:06,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:06,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:06,829 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-25 00:41:06,829 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:06,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-25 00:41:06,830 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:06,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:06,832 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:06,834 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:06,835 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:06,838 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:06,846 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-08-25 00:41:07,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:07,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-08-25 00:41:07,535 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-08-25 00:41:07,820 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-25 00:41:07,820 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-08-25 00:41:07,824 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-08-25 00:41:08,098 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-25 00:41:08,098 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-08-25 00:41:08,103 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:08,103 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:08,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,105 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-25 00:41:08,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-25 00:41:08,126 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-25 00:41:08,126 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:08,126 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:08,129 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,134 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-25 00:41:08,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:08,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:08,357 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-25 00:41:08,362 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,365 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-08-25 00:41:08,367 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:08,367 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-08-25 00:41:08,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-25 00:41:08,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-25 00:41:08,390 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-25 00:41:08,390 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-25 00:41:08,390 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-08-25 00:41:08,390 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:08,390 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:08,393 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,399 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-25 00:41:08,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:08,818 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-25 00:41:08,823 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-25 00:41:08,826 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-08-25 00:41:08,828 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:08,828 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-08-25 00:41:08,828 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:08,871 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:08,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:08,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:08,913 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:08,918 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a626610> has no local changes
2025-08-25 00:41:08,918 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:08,925 [ scc.git] DEBUG [detached HEAD 2736057] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:08,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:08,926 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:09,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:09,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-08-25 00:41:09,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:10,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-08-25 00:41:10,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:10,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-25 00:41:10,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:11,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:11,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:11,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:11,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:12,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-25 00:41:12,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:12,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:12,616 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:41:12,868 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:13,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-08-25 00:41:13,170 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:41:13,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:13,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-25 00:41:13,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:14,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:14,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:14,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:15,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:15,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-25 00:41:15,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:15,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:15,796 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-25 00:41:16,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:16,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-08-25 00:41:16,336 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-25 00:41:16,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:16,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-25 00:41:17,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:17,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:17,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:17,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:18,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:18,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-25 00:41:18,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:18,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:18,959 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-25 00:41:19,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:19,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-08-25 00:41:19,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:19,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-08-25 00:41:20,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:20,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-08-25 00:41:20,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:20,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-08-25 00:41:21,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:21,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-08-25 00:41:21,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:21,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-08-25 00:41:22,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:22,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-08-25 00:41:22,473 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:22,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-25 00:41:22,473 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:22,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:22,476 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:22,478 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:22,478 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:22,481 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:22,484 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:22,485 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-08-25 00:41:22,798 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-25 00:41:22,799 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-08-25 00:41:22,803 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-08-25 00:41:23,080 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-25 00:41:23,080 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-08-25 00:41:23,085 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-08-25 00:41:23,362 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-25 00:41:23,363 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-08-25 00:41:23,367 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:23,367 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:23,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:23,369 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-25 00:41:23,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:23,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-25 00:41:23,383 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:23,386 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-08-25 00:41:23,386 [ scc.git] DEBUG package.json | 2 +-
2025-08-25 00:41:23,387 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-08-25 00:41:23,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:23,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:23,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-08-25 00:41:23,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:23,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-08-25 00:41:23,642 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-25 00:41:23,642 [ scc.git] DEBUG Auto-merging package.json
2025-08-25 00:41:23,643 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:23,646 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-08-25 00:41:23,646 [ scc.git] DEBUG package.json | 2 +-
2025-08-25 00:41:23,646 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-08-25 00:41:23,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:24,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:24,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-25 00:41:24,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:24,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-25 00:41:24,113 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:24,116 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-25 00:41:24,116 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-25 00:41:24,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:24,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:24,551 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:24,593 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:24,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:24,595 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:24,636 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:24,640 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a5ece90> has no local changes
2025-08-25 00:41:24,640 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:24,647 [ scc.git] DEBUG [detached HEAD 674e2b7] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:24,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:24,647 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:24,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:25,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-08-25 00:41:25,018 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:25,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-25 00:41:25,018 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:25,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:25,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:25,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:25,023 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:25,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:25,029 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:25,029 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:25,029 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:25,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:25,032 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:25,074 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:25,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:25,076 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:25,117 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:25,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693842ce50> has no local changes
2025-08-25 00:41:25,120 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:25,127 [ scc.git] DEBUG [detached HEAD 1794818] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:25,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:25,127 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:25,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:25,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-08-25 00:41:25,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:26,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-08-25 00:41:26,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:26,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-08-25 00:41:26,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:27,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-25 00:41:27,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:27,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:28,013 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:28,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:28,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:28,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-25 00:41:29,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:29,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:29,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:29,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-25 00:41:30,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:30,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-08-25 00:41:30,348 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-08-25 00:41:30,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:30,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-08-25 00:41:30,906 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:30,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-25 00:41:30,906 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:30,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:30,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:30,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:30,911 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:30,914 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:30,917 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:30,917 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-08-25 00:41:31,210 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-08-25 00:41:31,210 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-08-25 00:41:31,215 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:31,215 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:31,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:31,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-25 00:41:31,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:31,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-25 00:41:31,232 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:31,235 [ scc.git] DEBUG setup.py | 4 +-
2025-08-25 00:41:31,235 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-08-25 00:41:31,235 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-08-25 00:41:31,235 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-08-25 00:41:31,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:31,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:31,438 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:31,481 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:31,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:31,483 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:31,524 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:31,528 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6938446ed0> has no local changes
2025-08-25 00:41:31,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:31,535 [ scc.git] DEBUG [detached HEAD 9b276a4] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:31,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:31,535 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:31,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:32,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-08-25 00:41:32,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:32,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-08-25 00:41:32,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:33,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-08-25 00:41:33,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:33,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-25 00:41:33,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:34,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:34,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:34,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-25 00:41:35,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:35,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:35,229 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-25 00:41:35,229 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:35,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-25 00:41:35,229 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:35,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,232 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:35,234 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:35,234 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:35,237 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:35,241 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:35,241 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-08-25 00:41:35,530 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-08-25 00:41:35,530 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-08-25 00:41:35,534 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:35,534 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:35,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,536 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-25 00:41:35,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,542 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Auto-merging setup.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-08-25 00:41:35,552 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:35,552 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:35,555 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-25 00:41:35,560 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-08-25 00:41:35,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:35,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:35,770 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-25 00:41:35,773 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-25 00:41:35,776 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- setup.py
- omero_signup/views.py
- omero_signup/urls.py
--conflicts
2025-08-25 00:41:35,778 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:35,778 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-08-25 00:41:35,778 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:35,823 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:35,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:35,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:35,867 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:35,871 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6938435250> has no local changes
2025-08-25 00:41:35,871 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:35,878 [ scc.git] DEBUG [detached HEAD 04552d9] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:35,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:35,878 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:36,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:36,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-08-25 00:41:36,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:36,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-08-25 00:41:37,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:37,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-25 00:41:37,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:38,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:38,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:38,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:38,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:39,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-25 00:41:39,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:39,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:39,689 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-08-25 00:41:39,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:40,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-08-25 00:41:40,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:40,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-08-25 00:41:40,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:41,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-08-25 00:41:41,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:41,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:42,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:42,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:42,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:42,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-08-25 00:41:43,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:43,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-08-25 00:41:43,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:43,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-08-25 00:41:44,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:44,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-08-25 00:41:44,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:44,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-25 00:41:45,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:45,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:45,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:45,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-25 00:41:46,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:46,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:46,378 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-25 00:41:46,379 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:46,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-25 00:41:46,379 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:46,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:46,382 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:46,384 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:46,384 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:46,387 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:46,390 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:46,390 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-08-25 00:41:46,683 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-25 00:41:46,683 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-08-25 00:41:46,688 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-08-25 00:41:46,987 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-25 00:41:46,987 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-08-25 00:41:46,992 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:46,992 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:46,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:46,995 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-08-25 00:41:46,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:47,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-08-25 00:41:47,014 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:47,018 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-08-25 00:41:47,018 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-08-25 00:41:47,018 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-08-25 00:41:47,019 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-08-25 00:41:47,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-08-25 00:41:47,021 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-08-25 00:41:47,021 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-08-25 00:41:47,021 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-08-25 00:41:47,022 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-08-25 00:41:47,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:47,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-25 00:41:47,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:47,218 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-25 00:41:47,228 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:41:47,231 [ scc.git] DEBUG docker | 1 +
2025-08-25 00:41:47,231 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-08-25 00:41:47,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:47,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:47,822 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:47,865 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:47,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:47,868 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:47,907 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:47,912 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693843be10> has no local changes
2025-08-25 00:41:47,912 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:47,920 [ scc.git] DEBUG [detached HEAD a61a2d6] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:47,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:47,920 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:48,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:48,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-08-25 00:41:48,300 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:48,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-25 00:41:48,301 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,303 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:48,306 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:48,306 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:48,308 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:48,312 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:48,312 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:48,312 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,314 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:48,355 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:48,399 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:48,402 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693841ed10> has no local changes
2025-08-25 00:41:48,402 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:48,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:48,409 [ scc.git] DEBUG [detached HEAD 285f3f2] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:48,409 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:48,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:48,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2025-08-25 00:41:48,788 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:48,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-25 00:41:48,788 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:48,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:48,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:48,793 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:48,793 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:48,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:48,805 [ scc.git] DEBUG Updating deab817..160d894
2025-08-25 00:41:49,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:49,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-08-25 00:41:49,504 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:49,504 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:49,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:49,507 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:49,550 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:49,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:49,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:49,593 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:49,596 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a648590> has no local changes
2025-08-25 00:41:49,596 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:49,603 [ scc.git] DEBUG [detached HEAD 2fc5e3a] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:49,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:49,603 [ scc.git] INFO Overriding base-branch from master to main
2025-08-25 00:41:49,603 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:49,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:50,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-08-25 00:41:50,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:50,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-08-25 00:41:50,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:51,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-08-25 00:41:51,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:51,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-08-25 00:41:51,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:52,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:52,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:41:52,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:53,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-08-25 00:41:53,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:53,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-08-25 00:41:54,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:54,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-08-25 00:41:54,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:54,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-25 00:41:55,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:55,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:41:55,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:55,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-25 00:41:56,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:56,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:41:56,372 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-25 00:41:56,373 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:56,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-25 00:41:56,373 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:56,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-08-25 00:41:56,378 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:56,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-08-25 00:41:56,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-08-25 00:41:56,384 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:56,384 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-08-25 00:41:56,681 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-08-25 00:41:56,681 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-08-25 00:41:56,685 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:56,685 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:56,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-25 00:41:56,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-25 00:41:56,701 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-08-25 00:41:56,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-08-25 00:41:56,702 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:41:56,702 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:41:56,705 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-25 00:41:56,709 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-08-25 00:41:56,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:56,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:41:56,891 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-25 00:41:56,894 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-25 00:41:56,897 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-08-25 00:41:56,900 [ scc.config] DEBUG Found github.token
2025-08-25 00:41:56,900 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-08-25 00:41:56,900 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:56,941 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:56,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:56,944 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:56,984 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:56,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a596490> has no local changes
2025-08-25 00:41:56,988 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:56,994 [ scc.git] DEBUG [detached HEAD 9190387] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:56,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:56,995 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:57,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:57,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-08-25 00:41:57,376 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:57,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-25 00:41:57,376 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,378 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:57,381 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:57,381 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:57,384 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:57,387 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:57,387 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:57,387 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,389 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:57,430 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,432 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:57,472 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:57,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f69384860d0> has no local changes
2025-08-25 00:41:57,476 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:57,482 [ scc.git] DEBUG [detached HEAD cf58ac7] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:57,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:57,483 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:57,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:57,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-08-25 00:41:57,881 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:41:57,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-25 00:41:57,881 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,883 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:41:57,886 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:41:57,886 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:41:57,889 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:41:57,892 [ scc.git] DEBUG Already up to date.
2025-08-25 00:41:57,892 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:41:57,892 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,894 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:41:57,933 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:41:57,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:41:57,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:41:57,973 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:41:57,977 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693a808610> has no local changes
2025-08-25 00:41:57,977 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:41:57,983 [ scc.git] DEBUG [detached HEAD 7a34113] merge master -Dorg -Ssuccess-only
2025-08-25 00:41:57,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:41:57,984 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:41:58,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:58,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-08-25 00:41:58,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:58,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-08-25 00:41:59,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:41:59,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-08-25 00:41:59,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:00,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-25 00:42:00,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:00,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:42:00,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:01,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-25 00:42:01,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:01,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:42:01,626 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-08-25 00:42:01,626 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:42:01,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-25 00:42:01,626 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:01,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:01,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-25 00:42:01,631 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:42:01,631 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-25 00:42:01,634 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-25 00:42:01,637 [ scc.git] DEBUG Already up to date.
2025-08-25 00:42:01,637 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-08-25 00:42:01,922 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-08-25 00:42:01,922 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-08-25 00:42:01,926 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:42:01,926 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:01,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:01,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-25 00:42:01,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:01,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-25 00:42:01,943 [ scc.git] DEBUG Auto-merging Dockerfile
2025-08-25 00:42:01,943 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-08-25 00:42:01,943 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:42:01,944 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:42:01,947 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-25 00:42:01,952 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-08-25 00:42:01,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:02,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:02,150 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-25 00:42:02,153 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-25 00:42:02,156 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-08-25 00:42:02,158 [ scc.config] DEBUG Found github.token
2025-08-25 00:42:02,158 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-08-25 00:42:02,158 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:42:02,201 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:02,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:02,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:42:02,246 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:42:02,250 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693ce57110> has no local changes
2025-08-25 00:42:02,250 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:42:02,257 [ scc.git] DEBUG [detached HEAD 74c15e3] merge master -Dorg -Ssuccess-only
2025-08-25 00:42:02,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:02,257 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-25 00:42:02,257 [ scc.repo] DEBUG ## PRs found:
2025-08-25 00:42:02,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:02,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-25 00:42:02,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:03,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-25 00:42:03,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:03,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-25 00:42:04,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:04,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-25 00:42:04,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:04,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:42:05,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:05,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-25 00:42:05,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:05,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-25 00:42:06,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:06,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:42:06,423 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-25 00:42:06,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:06,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-25 00:42:07,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:07,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-25 00:42:07,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:08,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-25 00:42:08,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:08,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-25 00:42:08,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:09,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-25 00:42:09,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:09,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-25 00:42:09,544 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-25 00:42:09,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:10,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-25 00:42:10,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:10,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-25 00:42:10,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:11,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-25 00:42:11,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:11,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-25 00:42:11,570 [ scc.repo] DEBUG ## Branches found:
2025-08-25 00:42:11,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-25 00:42:11,570 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:11,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:11,573 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-25 00:42:11,575 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-25 00:42:11,576 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-25 00:42:11,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-25 00:42:11,590 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-08-25 00:42:11,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:12,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-08-25 00:42:12,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:12,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-08-25 00:42:12,997 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-25 00:42:13,294 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-25 00:42:13,294 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-25 00:42:13,299 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-25 00:42:13,594 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-25 00:42:13,594 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-25 00:42:13,599 [ scc.git] DEBUG ## Unique users: []
2025-08-25 00:42:13,599 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:13,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:13,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-25 00:42:13,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:13,610 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-25 00:42:13,621 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-25 00:42:13,622 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-25 00:42:13,622 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-25 00:42:13,625 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-25 00:42:13,629 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-25 00:42:13,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:13,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:13,832 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-25 00:42:13,838 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-25 00:42:13,842 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#514](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-25 00:42:13,844 [ scc.config] DEBUG Found github.token
2025-08-25 00:42:13,844 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-25 00:42:13,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-25 00:42:13,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:13,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-25 00:42:13,862 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-25 00:42:13,866 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-25 00:42:13,866 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-25 00:42:14,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:14,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:14,280 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-25 00:42:14,321 [ scc.git] DEBUG Get sha1 of %s
2025-08-25 00:42:14,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-25 00:42:14,324 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:42:14,364 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:42:14,368 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6938446890> has no local changes
2025-08-25 00:42:14,368 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:42:14,375 [ scc.git] DEBUG [detached HEAD c09466d] merge master -Dorg -Ssuccess-only
2025-08-25 00:42:14,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:14,375 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-25 00:42:14,456 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-08-25 00:42:14,532 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:14,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:14,722 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-08-25 00:42:14,724 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-08-25 00:42:14,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:15,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:15,179 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-08-25 00:42:15,181 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-08-25 00:42:15,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:15,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:15,630 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-08-25 00:42:15,632 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-08-25 00:42:15,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:16,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:16,063 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-08-25 00:42:16,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:16,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:16,523 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-08-25 00:42:16,525 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-08-25 00:42:16,770 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:16,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:16,965 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-08-25 00:42:16,967 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-08-25 00:42:17,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:17,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:17,432 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-08-25 00:42:17,434 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-08-25 00:42:17,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:17,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:17,880 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-08-25 00:42:17,881 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-08-25 00:42:18,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:18,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:18,340 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-08-25 00:42:18,342 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-08-25 00:42:18,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:18,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:18,782 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-08-25 00:42:18,784 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-08-25 00:42:19,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:19,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:19,225 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-08-25 00:42:19,227 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-08-25 00:42:19,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:19,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:19,685 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-08-25 00:42:19,687 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-08-25 00:42:19,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:20,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:20,172 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-08-25 00:42:20,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:20,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:20,603 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-08-25 00:42:20,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:21,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:21,059 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-08-25 00:42:21,061 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-08-25 00:42:21,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:21,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:21,498 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-08-25 00:42:21,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:21,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:21,941 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-08-25 00:42:22,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:22,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:22,407 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-08-25 00:42:22,409 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-08-25 00:42:22,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:22,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:22,879 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-08-25 00:42:22,881 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-08-25 00:42:23,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:23,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:23,336 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-08-25 00:42:23,338 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-08-25 00:42:23,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:23,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:23,782 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-08-25 00:42:23,784 [ scc.config] DEBUG Found submodule.scripts.url
2025-08-25 00:42:24,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-25 00:42:24,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-25 00:42:24,238 [ scc.config] DEBUG Found submodule.scripts.branch
2025-08-25 00:42:24,238 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-25 00:42:24,331 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f693c462210> has local changes
2025-08-25 00:42:24,331 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 180 will-moore 'Register command' (status: failure)
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#514 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/514/)'
2025-08-25 00:42:24,345 [ scc.git] DEBUG [detached HEAD 67b465e] merge master -Dorg -Ssuccess-only
2025-08-25 00:42:24,345 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-08-25 00:42:24,345 [ scc.merge] INFO Repository: ome/omero-plugins
2025-08-25 00:42:24,345 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,345 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-08-25 00:42:24,346 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-08-25 00:42:24,346 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-08-25 00:42:24,346 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-08-25 00:42:24,346 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-08-25 00:42:24,346 [ scc.merge] INFO
2025-08-25 00:42:24,346 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-08-25 00:42:24,346 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 180 will-moore 'Register command' (status: failure)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-08-25 00:42:24,346 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-08-25 00:42:24,346 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,346 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Repository: ome/omero-figure
2025-08-25 00:42:24,347 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-08-25 00:42:24,347 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc
2025-08-25 00:42:24,347 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-08-25 00:42:24,347 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,347 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-08-25 00:42:24,347 [ scc.merge] INFO
2025-08-25 00:42:24,347 [ scc.merge] INFO Repository: ome/omero-gallery
2025-08-25 00:42:24,348 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-08-25 00:42:24,348 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-08-25 00:42:24,348 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-08-25 00:42:24,348 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Repository: ome/omero-mapr
2025-08-25 00:42:24,348 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-08-25 00:42:24,348 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,348 [ scc.merge] INFO
2025-08-25 00:42:24,348 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-08-25 00:42:24,348 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-metadata
2025-08-25 00:42:24,349 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-08-25 00:42:24,349 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-parade
2025-08-25 00:42:24,349 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-rois
2025-08-25 00:42:24,349 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: ome/omero-signup
2025-08-25 00:42:24,349 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,349 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-25 00:42:24,349 [ scc.merge] INFO
2025-08-25 00:42:24,349 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-08-25 00:42:24,350 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/omero-upload
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-08-25 00:42:24,350 [ scc.merge] INFO Updating deab817..160d894
2025-08-25 00:42:24,350 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-08-25 00:42:24,350 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-08-25 00:42:24,350 [ scc.merge] INFO Already up to date.
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,350 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,350 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-08-25 00:42:24,350 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] INFO Repository: ome/scripts
2025-08-25 00:42:24,351 [ scc.merge] INFO Excluded PRs:
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-25 00:42:24,351 [ scc.merge] INFO Updating 4b4c755..573db34
2025-08-25 00:42:24,351 [ scc.merge] INFO Previously merged:
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-08-25 00:42:24,351 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] INFO Merged PRs:
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-25 00:42:24,351 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-25 00:42:24,351 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-25 00:42:24,351 [ scc.merge] INFO
2025-08-25 00:42:24,351 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-25 00:42:24,351 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-25 00:42:24,353 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-25 00:42:24,356 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-25 00:42:24,358 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-25 00:42:24,360 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-25 00:42:24,363 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-25 00:42:24,365 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-25 00:42:24,368 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-25 00:42:24,370 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-25 00:42:24,372 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-25 00:42:24,375 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-25 00:42:24,377 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-25 00:42:24,379 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-25 00:42:24,382 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-25 00:42:24,384 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-25 00:42:24,386 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-25 00:42:24,389 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-25 00:42:24,391 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-25 00:42:24,393 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-25 00:42:24,395 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-25 00:42:24,398 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-25 00:42:24,400 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-25 00:42:24,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-25 00:42:24,402 [ scc.git] DEBUG Calling 'git remote'
2025-08-25 00:42:24,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD f1a45fb] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
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Entering 'omero-cli-render'
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Entering 'omero-cli-zarr'
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Untracked files:
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.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
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Entering 'omero-fpbioimage'
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Entering 'omero-gallery'
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Entering 'omero-iviewer'
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Entering 'omero-mapr'
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Entering 'omero-metadata'
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Entering 'omero-parade'
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Entering 'omero-prometheus-tools'
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Entering 'omero-rois'
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Entering 'omero-signup'
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Entering 'omero-test-infra'
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Entering 'omero-webtest'
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Entering 'rOMERO-gateway'
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[detached HEAD 38e2c0f] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-25 00:43:14,655 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-25 00:43:24,743 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-25 00:43:27,382 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-25 00:43:32,505 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-25 00:44:12,995 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
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[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS