Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision fa96199a010876372e5f8a6d8ad1a96e00b44f43 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 Commit message: "Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4" > git rev-list --no-walk fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 256 [Pipeline] sh > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-11-28 10:55:51,896 [ scc.config] DEBUG Found github.token 2024-11-28 10:55:51,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-28 10:55:52,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:55:52,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:55:52,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-28 10:55:52,907 [ scc.gh] DEBUG 4994 remaining from 5000 (Reset at 11:11 2024-11-28 10:55:52,908 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:55:52,912 [ scc.git] DEBUG Check current status 2024-11-28 10:55:52,912 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:55:52,915 [ scc.git] DEBUG fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-28 10:55:52,915 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:55:53,019 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (heads/master-3-g4628e82) 2024-11-28 10:55:53,022 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-28 10:55:53,024 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-28 10:55:53,030 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-28 10:55:53,033 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-28 10:55:53,036 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-28 10:55:53,038 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-28 10:55:53,050 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-28 10:55:53,063 [ scc.git] DEBUG 3a505e457ba14320cef0b0f7ba2577026a4fdf9c omero-mapr (v0.5.2-13-g3a505e4) 2024-11-28 10:55:53,066 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-28 10:55:53,068 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-28 10:55:53,071 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-28 10:55:53,074 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-28 10:55:53,076 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-28 10:55:53,093 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-28 10:55:53,096 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-28 10:55:53,098 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-28 10:55:53,100 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-28 10:55:53,103 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-28 10:55:53,105 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-28 10:55:53,108 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-28 10:55:53,111 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-28 10:55:53,115 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:55:53,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-11-28 10:55:53,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:55:54,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:55:54,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:55:55,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:55:55,079 [ scc.git] DEBUG Resetting... 2024-11-28 10:55:55,079 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-28 10:55:55,088 [ scc.git] DEBUG HEAD is now at fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-28 10:55:55,088 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-28 10:55:55,180 [ scc.git] DEBUG Check current status 2024-11-28 10:55:55,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:55:55,184 [ scc.git] DEBUG fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-28 10:55:55,184 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:55:55,228 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (heads/master-3-g4628e82) 2024-11-28 10:55:55,230 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-28 10:55:55,233 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-28 10:55:55,235 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-28 10:55:55,239 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-28 10:55:55,241 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-28 10:55:55,244 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-28 10:55:55,247 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-28 10:55:55,250 [ scc.git] DEBUG 3a505e457ba14320cef0b0f7ba2577026a4fdf9c omero-mapr (v0.5.2-13-g3a505e4) 2024-11-28 10:55:55,253 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-28 10:55:55,256 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-28 10:55:55,258 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-28 10:55:55,261 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-28 10:55:55,264 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-28 10:55:55,267 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-28 10:55:55,269 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-28 10:55:55,272 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-28 10:55:55,274 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-28 10:55:55,276 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-28 10:55:55,279 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-28 10:55:55,281 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-28 10:55:55,285 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-28 10:55:55,285 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-28 10:55:55,286 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-28 10:55:55,286 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-28 10:55:55,286 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-28 10:55:55,286 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-28 10:55:55,286 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:55:55,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-11-28 10:55:56,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/410 HTTP/1.1" 200 None 2024-11-28 10:55:56,082 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:55:56,082 [ scc.repo] DEBUG - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`' 2024-11-28 10:55:56,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/409 HTTP/1.1" 200 None 2024-11-28 10:55:56,556 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:55:56,556 [ scc.repo] DEBUG - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`' 2024-11-28 10:55:57,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/408 HTTP/1.1" 200 None 2024-11-28 10:55:57,030 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:55:57,030 [ scc.repo] DEBUG - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`' 2024-11-28 10:55:57,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/407 HTTP/1.1" 200 None 2024-11-28 10:55:57,528 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:55:57,529 [ scc.repo] DEBUG - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`' 2024-11-28 10:55:57,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/406 HTTP/1.1" 200 None 2024-11-28 10:55:57,994 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:55:57,994 [ scc.repo] DEBUG - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`' 2024-11-28 10:55:57,994 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:55:57,994 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:55:57,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:55:57,998 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:55:58,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:55:58,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:55:58,005 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:55:58,009 [ scc.git] DEBUG Already up to date. 2024-11-28 10:55:58,009 [ scc.git] DEBUG Calling 'git fetch origin pull/406/head' 2024-11-28 10:55:58,362 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:55:58,363 [ scc.git] DEBUG * branch refs/pull/406/head -> FETCH_HEAD 2024-11-28 10:55:58,367 [ scc.git] DEBUG Calling 'git fetch origin pull/407/head' 2024-11-28 10:55:58,693 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:55:58,694 [ scc.git] DEBUG * branch refs/pull/407/head -> FETCH_HEAD 2024-11-28 10:55:58,698 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-11-28 10:55:58,979 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:55:58,979 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-11-28 10:55:58,984 [ scc.git] DEBUG Calling 'git fetch origin pull/409/head' 2024-11-28 10:55:59,260 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:55:59,260 [ scc.git] DEBUG * branch refs/pull/409/head -> FETCH_HEAD 2024-11-28 10:55:59,265 [ scc.git] DEBUG Calling 'git fetch origin pull/410/head' 2024-11-28 10:55:59,551 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:55:59,551 [ scc.git] DEBUG * branch refs/pull/410/head -> FETCH_HEAD 2024-11-28 10:55:59,556 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:55:59,556 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:55:59,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:55:59,560 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...26598976fe7c98274f876226ff0b97fddf33e1b3' 2024-11-28 10:55:59,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:55:59,574 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 406 (Bump omero-iviewer from `a8f380f` to `b4102d4`) 26598976fe7c98274f876226ff0b97fddf33e1b3' 2024-11-28 10:55:59,589 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:55:59,591 [ scc.git] DEBUG omero-iviewer | 2 +- 2024-11-28 10:55:59,591 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-28 10:55:59,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:55:59,805 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cdabedba7f8addc01dfc52d3ed57ef6347b81038' 2024-11-28 10:55:59,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:55:59,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 407 (Bump omero-gallery from `56f4435` to `2a621da`) cdabedba7f8addc01dfc52d3ed57ef6347b81038' 2024-11-28 10:55:59,880 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:55:59,882 [ scc.git] DEBUG omero-gallery | 2 +- 2024-11-28 10:55:59,882 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-28 10:56:00,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:56:00,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da79fce8549de20c83dbfbfcf8d83855f3f7f7c7' 2024-11-28 10:56:00,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:56:00,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 408 (Bump omero-cli-render from `173cac0` to `c0517ed`) da79fce8549de20c83dbfbfcf8d83855f3f7f7c7' 2024-11-28 10:56:00,234 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:56:00,237 [ scc.git] DEBUG omero-cli-render | 2 +- 2024-11-28 10:56:00,237 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-28 10:56:00,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:56:00,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...757a6162daf2b934f31d16180dab40efa967792d' 2024-11-28 10:56:00,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:56:00,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 409 (Bump omero-mapr from `3a505e4` to `0a557da`) 757a6162daf2b934f31d16180dab40efa967792d' 2024-11-28 10:56:00,654 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:56:00,656 [ scc.git] DEBUG omero-mapr | 2 +- 2024-11-28 10:56:00,656 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-28 10:56:01,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:56:01,033 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef4958bb3df1b4b314ca5c6cd554144476646ba2' 2024-11-28 10:56:01,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:56:01,041 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 410 (Bump omero-figure from `24444fe` to `1c67437`) ef4958bb3df1b4b314ca5c6cd554144476646ba2' 2024-11-28 10:56:01,056 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:56:01,059 [ scc.git] DEBUG omero-figure | 2 +- 2024-11-28 10:56:01,059 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-28 10:56:01,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:56:01,431 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:56:01,612 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'c0517eda2bce22c13c09c89fa37f31c2d76d753e' 2024-11-28 10:56:01,631 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '1c6743732664ad6d204eec4c9290f18b6c697ca9' 2024-11-28 10:56:01,662 [ scc.git] DEBUG Submodule path 'omero-gallery': checked out '2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-11-28 10:56:02,720 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out 'b4102d46958a805cacff0c7ccceb05ccff746309' 2024-11-28 10:56:02,825 [ scc.git] DEBUG Submodule path 'omero-mapr': checked out '0a557da89145e65db313c1721a26cb43e490dd8a' 2024-11-28 10:56:02,826 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:56:02,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:56:02,830 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:56:03,630 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52a9f73850> has no local changes 2024-11-28 10:56:03,630 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`' - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`' - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`' - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`' - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:56:03,697 [ scc.git] DEBUG [detached HEAD e230c68] merge master -Dorg -Snone 2024-11-28 10:56:03,697 [ scc.merge] INFO Repository: ome/omero-plugins 2024-11-28 10:56:03,697 [ scc.merge] INFO Already up to date. 2024-11-28 10:56:03,697 [ scc.merge] INFO 2024-11-28 10:56:03,697 [ scc.merge] INFO Merged PRs: 2024-11-28 10:56:03,697 [ scc.merge] INFO - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`' 2024-11-28 10:56:03,698 [ scc.merge] INFO - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`' 2024-11-28 10:56:03,698 [ scc.merge] INFO - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`' 2024-11-28 10:56:03,698 [ scc.merge] INFO - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`' 2024-11-28 10:56:03,698 [ scc.merge] INFO - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`' 2024-11-28 10:56:03,698 [ scc.merge] INFO 2024-11-28 10:56:03,698 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-28 10:56:03,698 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'minimal-omero-client': checked out 'ca8c2ea435592cba45b857cc536815b082c5982b' Submodule path 'omero-cli-duplicate': checked out '4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96' Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' Submodule path 'omero-fpbioimage': checked out '3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a' Submodule path 'omero-parade': checked out 'fb5ae86bde41d34018ff4da10991a34b29e61f4b' Submodule path 'omero-upload': checked out '100f6ae42e2c955ffb7cd1e854eb82079476119b' Submodule path 'omero-weberror': checked out '70b01edc650d59445c1b8508e86c29ab069b2b8f' Submodule path 'omero-webtest': checked out '5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-11-28 10:56:13,146 [ scc.config] DEBUG Found github.token 2024-11-28 10:56:13,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-28 10:56:13,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:56:13,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:56:14,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-28 10:56:14,121 [ scc.gh] DEBUG 4976 remaining from 5000 (Reset at 11:11 2024-11-28 10:56:14,122 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:14,125 [ scc.git] DEBUG Check current status 2024-11-28 10:56:14,125 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:14,129 [ scc.git] DEBUG e230c68 merge master -Dorg -Snone 2024-11-28 10:56:14,129 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:14,172 [ scc.git] DEBUG +ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-11-28 10:56:14,222 [ scc.git] DEBUG +4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-11-28 10:56:14,298 [ scc.git] DEBUG c0517eda2bce22c13c09c89fa37f31c2d76d753e omero-cli-render (v0.8.1-11-gc0517ed) 2024-11-28 10:56:14,301 [ scc.git] DEBUG +11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-11-28 10:56:14,305 [ scc.git] DEBUG 1c6743732664ad6d204eec4c9290f18b6c697ca9 omero-figure (v7.1.0-216-g1c674373) 2024-11-28 10:56:14,309 [ scc.git] DEBUG +3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-11-28 10:56:14,389 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-11-28 10:56:14,392 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-11-28 10:56:14,395 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-11-28 10:56:14,398 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-28 10:56:14,418 [ scc.git] DEBUG +fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-11-28 10:56:14,421 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-28 10:56:14,424 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-28 10:56:14,426 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-28 10:56:14,429 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-28 10:56:14,432 [ scc.git] DEBUG +100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-11-28 10:56:14,435 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-28 10:56:14,437 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-28 10:56:14,454 [ scc.git] DEBUG +70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-11-28 10:56:14,457 [ scc.git] DEBUG +5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-11-28 10:56:14,459 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-28 10:56:14,462 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-28 10:56:14,466 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:14,466 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-11-28 10:56:14,468 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-11-28 10:56:14,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-11-28 10:56:15,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:15,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:16,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:16,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:16,507 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:16,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-28 10:56:16,575 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:16,578 [ scc.git] DEBUG Check current status 2024-11-28 10:56:16,578 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:16,582 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-11-28 10:56:16,582 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:16,621 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:16,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-11-28 10:56:17,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:17,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:18,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:18,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:18,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:18,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:18,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-28 10:56:18,749 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:18,752 [ scc.git] DEBUG Check current status 2024-11-28 10:56:18,752 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:18,756 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-11-28 10:56:18,756 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:18,794 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:19,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-11-28 10:56:19,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:20,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:20,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:20,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:20,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:20,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:20,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-28 10:56:20,967 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:20,970 [ scc.git] DEBUG Check current status 2024-11-28 10:56:20,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:20,974 [ scc.git] DEBUG c0517ed Merge pull request #67 from sbesson/set_help_update 2024-11-28 10:56:20,974 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:21,011 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:21,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-11-28 10:56:21,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:22,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:22,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:23,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:23,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:23,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:23,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-28 10:56:23,186 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:23,190 [ scc.git] DEBUG Check current status 2024-11-28 10:56:23,190 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:23,193 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-11-28 10:56:23,193 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:23,231 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:23,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-11-28 10:56:24,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:24,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:24,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:25,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:25,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:25,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:25,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-28 10:56:25,348 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:25,351 [ scc.git] DEBUG Check current status 2024-11-28 10:56:25,351 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:25,415 [ scc.git] DEBUG 1c674373 Merge pull request #597 from Rdornier/fix-zoom-label-pdf 2024-11-28 10:56:25,415 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:25,454 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:25,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-11-28 10:56:26,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:26,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:27,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:27,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:27,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:27,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:27,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-28 10:56:27,590 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:27,593 [ scc.git] DEBUG Check current status 2024-11-28 10:56:27,594 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:27,597 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-11-28 10:56:27,597 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:27,635 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:28,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-11-28 10:56:28,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:28,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:29,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:29,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:29,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:29,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:29,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-28 10:56:29,863 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:29,866 [ scc.git] DEBUG Check current status 2024-11-28 10:56:29,867 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:29,870 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-11-28 10:56:29,870 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:29,909 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:30,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-11-28 10:56:30,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:31,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:31,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:32,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:32,012 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:32,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:32,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-28 10:56:32,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:32,053 [ scc.git] DEBUG Check current status 2024-11-28 10:56:32,054 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:32,057 [ scc.git] DEBUG b4102d4 add dev 2024-11-28 10:56:32,057 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:32,095 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:32,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-11-28 10:56:33,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:33,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:33,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:34,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:34,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:34,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:34,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-28 10:56:34,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:34,346 [ scc.git] DEBUG Check current status 2024-11-28 10:56:34,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:34,350 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-11-28 10:56:34,350 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:34,388 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:34,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-11-28 10:56:35,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:35,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:36,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:36,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:36,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:36,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:36,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-28 10:56:36,623 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:36,627 [ scc.git] DEBUG Check current status 2024-11-28 10:56:36,627 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:36,631 [ scc.git] DEBUG fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-28 10:56:36,631 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:36,670 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:37,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-11-28 10:56:37,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:37,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:38,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:38,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:38,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:38,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:38,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-28 10:56:38,848 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:38,852 [ scc.git] DEBUG Check current status 2024-11-28 10:56:38,852 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:38,857 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-11-28 10:56:38,857 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:38,896 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:39,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-11-28 10:56:39,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:40,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:40,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:40,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:40,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:41,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:41,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-28 10:56:41,038 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:41,042 [ scc.git] DEBUG Check current status 2024-11-28 10:56:41,043 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:41,047 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-11-28 10:56:41,047 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:41,085 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:41,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-11-28 10:56:41,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:42,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:42,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:43,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:43,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:43,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:43,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-28 10:56:43,243 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:43,247 [ scc.git] DEBUG Check current status 2024-11-28 10:56:43,247 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:43,251 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-11-28 10:56:43,251 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:43,290 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:43,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-11-28 10:56:44,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:44,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:44,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:45,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:45,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:45,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:45,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-28 10:56:45,396 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:45,400 [ scc.git] DEBUG Check current status 2024-11-28 10:56:45,400 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:45,404 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-11-28 10:56:45,404 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:45,443 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:45,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-11-28 10:56:46,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:46,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:47,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:47,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:47,547 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:47,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:47,584 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-28 10:56:47,584 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:47,588 [ scc.git] DEBUG Check current status 2024-11-28 10:56:47,588 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:47,592 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-11-28 10:56:47,593 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:47,632 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:47,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-28 10:56:47,971 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-28 10:56:48,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-11-28 10:56:48,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:49,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:49,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:49,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:49,981 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:50,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:50,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-28 10:56:50,020 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:50,024 [ scc.git] DEBUG Check current status 2024-11-28 10:56:50,024 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:50,029 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-11-28 10:56:50,029 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:50,068 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:50,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-11-28 10:56:51,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:51,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:51,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:52,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:52,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:52,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:52,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-28 10:56:52,365 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:52,369 [ scc.git] DEBUG Check current status 2024-11-28 10:56:52,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:52,373 [ scc.git] DEBUG deab817 update setup-python to v4 2024-11-28 10:56:52,373 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:52,412 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-11-28 10:56:53,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:53,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:54,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:54,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:54,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:54,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:54,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-28 10:56:54,547 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:54,551 [ scc.git] DEBUG Check current status 2024-11-28 10:56:54,551 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:54,555 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-11-28 10:56:54,555 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:54,594 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:54,595 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-11-28 10:56:55,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-11-28 10:56:55,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:55,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:56,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:56,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:56,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:56,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:56,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-28 10:56:56,759 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:56,763 [ scc.git] DEBUG Check current status 2024-11-28 10:56:56,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:56,768 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-11-28 10:56:56,768 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:56,807 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:57,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-28 10:56:57,144 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-28 10:56:57,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-11-28 10:56:57,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:56:58,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:56:58,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:56:59,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:56:59,095 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:56:59,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:56:59,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-28 10:56:59,133 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:56:59,137 [ scc.git] DEBUG Check current status 2024-11-28 10:56:59,138 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:56:59,142 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-11-28 10:56:59,142 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:56:59,182 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:56:59,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-28 10:56:59,524 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-28 10:56:59,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-11-28 10:57:00,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:57:00,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:57:01,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:57:01,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:57:01,487 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:01,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:01,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-28 10:57:01,527 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:57:01,531 [ scc.git] DEBUG Check current status 2024-11-28 10:57:01,531 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:57:01,535 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-11-28 10:57:01,536 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:57:01,575 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:57:01,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-11-28 10:57:02,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:57:02,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:57:03,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:57:03,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:57:03,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:03,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:03,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-28 10:57:03,772 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-28 10:57:03,777 [ scc.git] DEBUG Check current status 2024-11-28 10:57:03,777 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:57:03,830 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-28 10:57:03,830 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:57:03,869 [ scc.config] DEBUG Found remote.origin.url 2024-11-28 10:57:03,870 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-11-28 10:57:04,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-28 10:57:04,156 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-28 10:57:04,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-11-28 10:57:04,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-28 10:57:05,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-28 10:57:05,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-28 10:57:06,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-28 10:57:06,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:06,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:06,141 [ scc.git] DEBUG Resetting... 2024-11-28 10:57:06,141 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-28 10:57:06,150 [ scc.git] DEBUG HEAD is now at e230c68 merge master -Dorg -Snone 2024-11-28 10:57:06,150 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-28 10:57:06,194 [ scc.git] DEBUG Submodule path 'minimal-omero-client': checked out '4628e82a32d8af458d9fa621303b24a0a860378f' 2024-11-28 10:57:06,205 [ scc.git] DEBUG Submodule path 'omero-cli-duplicate': checked out '027b3e695d5b225955918c53ef8c81e0d5bc6bf4' 2024-11-28 10:57:06,218 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-11-28 10:57:06,232 [ scc.git] DEBUG Submodule path 'omero-fpbioimage': checked out 'e5b3ca3a5aba41c950d2427b1a05ee0ced55670e' 2024-11-28 10:57:06,254 [ scc.git] DEBUG Submodule path 'omero-parade': checked out '5d441c250912a98d8a87771f78dde8b54c8e12d6' 2024-11-28 10:57:06,274 [ scc.git] DEBUG Submodule path 'omero-upload': checked out 'aca9e9cad82a08e2e3d37d71cb374b37c90e4693' 2024-11-28 10:57:06,290 [ scc.git] DEBUG Submodule path 'omero-weberror': checked out 'adfa132f23a1b12ca2d2ec53ebba54c760fe2d07' 2024-11-28 10:57:06,300 [ scc.git] DEBUG Submodule path 'omero-webtest': checked out '8da48e116184f1ebb28aa9629748afdfb0282ae5' 2024-11-28 10:57:06,308 [ scc.git] DEBUG Check current status 2024-11-28 10:57:06,308 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-28 10:57:06,313 [ scc.git] DEBUG e230c68 merge master -Dorg -Snone 2024-11-28 10:57:06,313 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-28 10:57:06,358 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (heads/master-3-g4628e82) 2024-11-28 10:57:06,360 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-28 10:57:06,363 [ scc.git] DEBUG c0517eda2bce22c13c09c89fa37f31c2d76d753e omero-cli-render (v0.8.1-11-gc0517ed) 2024-11-28 10:57:06,366 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-28 10:57:06,370 [ scc.git] DEBUG 1c6743732664ad6d204eec4c9290f18b6c697ca9 omero-figure (v7.1.0-216-g1c674373) 2024-11-28 10:57:06,373 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-28 10:57:06,376 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-11-28 10:57:06,379 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-11-28 10:57:06,381 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-11-28 10:57:06,384 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-28 10:57:06,387 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-28 10:57:06,389 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-28 10:57:06,392 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-28 10:57:06,394 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-28 10:57:06,398 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-28 10:57:06,400 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-28 10:57:06,402 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-28 10:57:06,405 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-28 10:57:06,407 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-28 10:57:06,409 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-28 10:57:06,412 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-28 10:57:06,415 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-28 10:57:06,416 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-28 10:57:06,416 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-28 10:57:06,416 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-28 10:57:06,416 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-28 10:57:06,416 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-28 10:57:06,416 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-11-28 10:57:06,416 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:06,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-11-28 10:57:07,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/410 HTTP/1.1" 200 None 2024-11-28 10:57:07,218 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:57:07,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/ef4958bb3df1b4b314ca5c6cd554144476646ba2 HTTP/1.1" 200 None 2024-11-28 10:57:08,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/ef4958bb3df1b4b314ca5c6cd554144476646ba2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:08,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/ef4958bb3df1b4b314ca5c6cd554144476646ba2 HTTP/1.1" 200 None 2024-11-28 10:57:09,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/ef4958bb3df1b4b314ca5c6cd554144476646ba2?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:09,240 [ scc.repo] DEBUG - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`' 2024-11-28 10:57:09,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/409 HTTP/1.1" 200 None 2024-11-28 10:57:09,728 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:57:10,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/757a6162daf2b934f31d16180dab40efa967792d HTTP/1.1" 200 None 2024-11-28 10:57:10,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/757a6162daf2b934f31d16180dab40efa967792d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:11,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/757a6162daf2b934f31d16180dab40efa967792d HTTP/1.1" 200 None 2024-11-28 10:57:11,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/757a6162daf2b934f31d16180dab40efa967792d?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:11,752 [ scc.repo] DEBUG - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`' 2024-11-28 10:57:12,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/408 HTTP/1.1" 200 None 2024-11-28 10:57:12,248 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:57:12,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/da79fce8549de20c83dbfbfcf8d83855f3f7f7c7 HTTP/1.1" 200 None 2024-11-28 10:57:13,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/da79fce8549de20c83dbfbfcf8d83855f3f7f7c7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:13,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/da79fce8549de20c83dbfbfcf8d83855f3f7f7c7 HTTP/1.1" 200 None 2024-11-28 10:57:14,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/da79fce8549de20c83dbfbfcf8d83855f3f7f7c7?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:14,272 [ scc.repo] DEBUG - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`' 2024-11-28 10:57:14,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/407 HTTP/1.1" 200 None 2024-11-28 10:57:14,779 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:57:15,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/cdabedba7f8addc01dfc52d3ed57ef6347b81038 HTTP/1.1" 200 None 2024-11-28 10:57:15,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/cdabedba7f8addc01dfc52d3ed57ef6347b81038/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:16,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/cdabedba7f8addc01dfc52d3ed57ef6347b81038 HTTP/1.1" 200 None 2024-11-28 10:57:16,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/cdabedba7f8addc01dfc52d3ed57ef6347b81038?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:16,691 [ scc.repo] DEBUG - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`' 2024-11-28 10:57:17,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/406 HTTP/1.1" 200 None 2024-11-28 10:57:17,145 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:57:17,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/26598976fe7c98274f876226ff0b97fddf33e1b3 HTTP/1.1" 200 None 2024-11-28 10:57:18,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/26598976fe7c98274f876226ff0b97fddf33e1b3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:18,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/26598976fe7c98274f876226ff0b97fddf33e1b3 HTTP/1.1" 200 None 2024-11-28 10:57:19,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/26598976fe7c98274f876226ff0b97fddf33e1b3?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:19,104 [ scc.repo] DEBUG - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`' 2024-11-28 10:57:19,104 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:57:19,104 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:19,104 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:19,109 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:57:19,114 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:57:19,114 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:57:19,119 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:57:19,124 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:19,125 [ scc.git] DEBUG Calling 'git fetch origin pull/406/head' 2024-11-28 10:57:19,469 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:57:19,469 [ scc.git] DEBUG * branch refs/pull/406/head -> FETCH_HEAD 2024-11-28 10:57:19,474 [ scc.git] DEBUG Calling 'git fetch origin pull/407/head' 2024-11-28 10:57:19,753 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:57:19,753 [ scc.git] DEBUG * branch refs/pull/407/head -> FETCH_HEAD 2024-11-28 10:57:19,758 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-11-28 10:57:20,036 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:57:20,036 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-11-28 10:57:20,041 [ scc.git] DEBUG Calling 'git fetch origin pull/409/head' 2024-11-28 10:57:20,322 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:57:20,322 [ scc.git] DEBUG * branch refs/pull/409/head -> FETCH_HEAD 2024-11-28 10:57:20,327 [ scc.git] DEBUG Calling 'git fetch origin pull/410/head' 2024-11-28 10:57:20,632 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-28 10:57:20,632 [ scc.git] DEBUG * branch refs/pull/410/head -> FETCH_HEAD 2024-11-28 10:57:20,636 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:57:20,637 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:20,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:20,641 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...26598976fe7c98274f876226ff0b97fddf33e1b3' 2024-11-28 10:57:20,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:20,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 406 (Bump omero-iviewer from `a8f380f` to `b4102d4`) 26598976fe7c98274f876226ff0b97fddf33e1b3' 2024-11-28 10:57:20,655 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:20,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:20,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cdabedba7f8addc01dfc52d3ed57ef6347b81038' 2024-11-28 10:57:20,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:20,806 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 407 (Bump omero-gallery from `56f4435` to `2a621da`) cdabedba7f8addc01dfc52d3ed57ef6347b81038' 2024-11-28 10:57:20,811 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:21,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:21,206 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da79fce8549de20c83dbfbfcf8d83855f3f7f7c7' 2024-11-28 10:57:21,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:21,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (Bump omero-cli-render from `173cac0` to `c0517ed`) da79fce8549de20c83dbfbfcf8d83855f3f7f7c7' 2024-11-28 10:57:21,221 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:21,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:21,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...757a6162daf2b934f31d16180dab40efa967792d' 2024-11-28 10:57:21,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:21,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 409 (Bump omero-mapr from `3a505e4` to `0a557da`) 757a6162daf2b934f31d16180dab40efa967792d' 2024-11-28 10:57:21,608 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:21,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:21,984 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef4958bb3df1b4b314ca5c6cd554144476646ba2' 2024-11-28 10:57:21,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:21,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 410 (Bump omero-figure from `24444fe` to `1c67437`) ef4958bb3df1b4b314ca5c6cd554144476646ba2' 2024-11-28 10:57:21,998 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:22,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:22,384 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:57:22,433 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:22,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:22,438 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:22,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-11-28 10:57:22,828 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:57:22,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-28 10:57:22,828 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:22,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:22,832 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:57:22,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:57:22,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:57:22,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:57:22,941 [ scc.git] DEBUG Updating 4628e82..ca8c2ea 2024-11-28 10:57:23,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls/67 HTTP/1.1" 200 None 2024-11-28 10:57:24,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls/68 HTTP/1.1" 200 None 2024-11-28 10:57:24,269 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:57:24,269 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:24,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:24,274 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:57:24,310 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:24,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:24,315 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:24,350 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:57:24,356 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe31aca1e50> has no local changes 2024-11-28 10:57:24,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Updating 4628e82..ca8c2ea Previously merged: - PR 67 jburel 'Gateway 5.10.0' - PR 68 jburel 'Bump action ' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:57:24,364 [ scc.git] DEBUG [detached HEAD cc4bd49] merge master -Dorg -Ssuccess-only 2024-11-28 10:57:24,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:24,364 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:24,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-11-28 10:57:25,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-11-28 10:57:25,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-11-28 10:57:25,756 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:57:25,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-28 10:57:25,756 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:25,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:25,761 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:57:25,765 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:57:25,765 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:57:25,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:57:25,779 [ scc.git] DEBUG Updating 027b3e6..4777ef8 2024-11-28 10:57:26,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls/27 HTTP/1.1" 200 None 2024-11-28 10:57:27,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls/25 HTTP/1.1" 200 None 2024-11-28 10:57:27,188 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:57:27,188 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:27,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:27,193 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:57:27,230 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:27,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:27,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:27,270 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:57:27,275 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe31aca1e80> has no local changes 2024-11-28 10:57:27,276 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Updating 027b3e6..4777ef8 Previously merged: - PR 27 jburel 'Build' - PR 25 jburel 'review message' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:57:27,283 [ scc.git] DEBUG [detached HEAD 9e91d51] merge master -Dorg -Ssuccess-only 2024-11-28 10:57:27,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:27,284 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:27,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-11-28 10:57:28,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-11-28 10:57:28,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-11-28 10:57:29,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-11-28 10:57:29,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-11-28 10:57:30,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-11-28 10:57:30,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:31,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:57:31,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-11-28 10:57:32,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-11-28 10:57:32,205 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:57:32,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-28 10:57:32,205 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:32,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:32,211 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:57:32,215 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:57:32,215 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:57:32,221 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:57:32,226 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:32,226 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:57:32,226 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:32,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:32,232 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:57:32,268 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:32,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:32,273 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:32,309 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:57:32,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe319c01f10> has no local changes 2024-11-28 10:57:32,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 59 will-moore 'Apply settings to Plate' (status: failure) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:57:32,321 [ scc.git] DEBUG [detached HEAD f4de959] merge master -Dorg -Ssuccess-only 2024-11-28 10:57:32,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:32,322 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:32,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-11-28 10:57:33,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-11-28 10:57:33,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-11-28 10:57:34,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-11-28 10:57:34,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-28 10:57:35,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:35,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:57:36,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-28 10:57:36,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:37,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-28 10:57:37,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-11-28 10:57:37,542 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-11-28 10:57:38,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-11-28 10:57:38,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-11-28 10:57:39,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-11-28 10:57:39,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-11-28 10:57:40,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:40,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-11-28 10:57:41,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:41,057 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-11-28 10:57:41,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-11-28 10:57:42,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-11-28 10:57:42,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-11-28 10:57:43,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:43,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-11-28 10:57:44,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:44,084 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-11-28 10:57:44,084 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:57:44,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-28 10:57:44,085 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:44,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:44,091 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:57:44,095 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:57:44,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:57:44,100 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:57:44,109 [ scc.git] DEBUG Updating 9b73dd9..11d3587 2024-11-28 10:57:44,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/165 HTTP/1.1" 200 None 2024-11-28 10:57:44,784 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-11-28 10:57:45,296 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-28 10:57:45,297 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-11-28 10:57:45,301 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-11-28 10:57:45,857 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-28 10:57:45,857 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-11-28 10:57:45,861 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-11-28 10:57:46,237 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-28 10:57:46,238 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-11-28 10:57:46,242 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:57:46,242 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:46,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:46,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-28 10:57:46,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:46,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-28 10:57:46,678 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-11-28 10:57:46,678 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-28 10:57:46,678 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-11-28 10:57:46,678 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:57:46,678 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:57:46,684 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-28 10:57:46,690 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-11-28 10:57:46,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:46,837 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-28 10:57:46,843 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-28 10:57:46,848 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-11-28 10:57:46,853 [ scc.config] DEBUG Found github.token 2024-11-28 10:57:46,853 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-11-28 10:57:46,853 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-28 10:57:46,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:46,863 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-28 10:57:46,897 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-11-28 10:57:46,898 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-11-28 10:57:46,898 [ scc.git] DEBUG Auto-merging setup.py 2024-11-28 10:57:46,898 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-11-28 10:57:46,898 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-28 10:57:46,898 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-11-28 10:57:46,898 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-11-28 10:57:46,898 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:57:46,898 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:57:46,903 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-28 10:57:46,909 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-11-28 10:57:47,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:47,230 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-28 10:57:47,236 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-28 10:57:47,241 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-11-28 10:57:47,246 [ scc.config] DEBUG Found github.token 2024-11-28 10:57:47,246 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-11-28 10:57:47,246 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-11-28 10:57:47,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:47,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-11-28 10:57:47,269 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-11-28 10:57:47,269 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-28 10:57:47,270 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:57:47,273 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-11-28 10:57:47,273 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-11-28 10:57:47,273 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-11-28 10:57:47,273 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-11-28 10:57:47,273 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-11-28 10:57:47,273 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-11-28 10:57:47,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:47,629 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:57:47,667 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:47,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:47,672 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:47,708 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:57:47,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe319be2e50> has no local changes 2024-11-28 10:57:47,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating 9b73dd9..11d3587 Previously merged: - PR 165 jburel 'Build' Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:57:47,722 [ scc.git] DEBUG [detached HEAD 83f6e76] merge master -Dorg -Ssuccess-only 2024-11-28 10:57:47,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:47,722 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:48,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-11-28 10:57:48,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-11-28 10:57:49,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-11-28 10:57:49,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-11-28 10:57:50,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-11-28 10:57:50,061 [ scc.repo] DEBUG # ... Include label: include 2024-11-28 10:57:50,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3584bb9925be735236075afd35e5e483d88af690 HTTP/1.1" 200 None 2024-11-28 10:57:51,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3584bb9925be735236075afd35e5e483d88af690/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:51,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3584bb9925be735236075afd35e5e483d88af690/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:57:52,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3584bb9925be735236075afd35e5e483d88af690 HTTP/1.1" 200 None 2024-11-28 10:57:52,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3584bb9925be735236075afd35e5e483d88af690?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:52,464 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-11-28 10:57:52,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-11-28 10:57:53,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-11-28 10:57:54,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/34bf0b88b712e8dd42396e6156bd64a4633a4007 HTTP/1.1" 200 None 2024-11-28 10:57:54,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/34bf0b88b712e8dd42396e6156bd64a4633a4007/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:57:55,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/34bf0b88b712e8dd42396e6156bd64a4633a4007/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:57:55,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/34bf0b88b712e8dd42396e6156bd64a4633a4007 HTTP/1.1" 200 None 2024-11-28 10:57:55,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/34bf0b88b712e8dd42396e6156bd64a4633a4007?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:57:55,827 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-11-28 10:57:55,827 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:57:55,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-28 10:57:55,828 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:55,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:55,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:57:55,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:57:55,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:57:55,843 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:57:55,849 [ scc.git] DEBUG Already up to date. 2024-11-28 10:57:55,849 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-11-28 10:57:56,542 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-28 10:57:56,542 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-11-28 10:57:56,545 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-11-28 10:57:56,832 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-28 10:57:56,832 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-11-28 10:57:56,836 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:57:56,836 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:56,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:56,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...34bf0b88b712e8dd42396e6156bd64a4633a4007' 2024-11-28 10:57:56,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:56,852 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 34bf0b88b712e8dd42396e6156bd64a4633a4007' 2024-11-28 10:57:56,866 [ scc.git] DEBUG Auto-merging src/index.html 2024-11-28 10:57:56,867 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:57:56,870 [ scc.git] DEBUG src/index.html | 10 ++++++---- 2024-11-28 10:57:56,870 [ scc.git] DEBUG src/js/views/files.js | 43 ++++++++++++++++++++++++++++++++----------- 2024-11-28 10:57:56,870 [ scc.git] DEBUG 2 files changed, 38 insertions(+), 15 deletions(-) 2024-11-28 10:57:57,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:57,041 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3584bb9925be735236075afd35e5e483d88af690' 2024-11-28 10:57:57,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:57,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) 3584bb9925be735236075afd35e5e483d88af690' 2024-11-28 10:57:57,067 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:57:57,072 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-11-28 10:57:57,072 [ scc.git] DEBUG package.json | 2 +- 2024-11-28 10:57:57,072 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-11-28 10:57:57,072 [ scc.git] DEBUG src/js/models/panel_model.js | 21 ++++++++++++--- 2024-11-28 10:57:57,072 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-11-28 10:57:57,072 [ scc.git] DEBUG src/js/views/right_panel_view.js | 26 +++++++++++++----- 2024-11-28 10:57:57,072 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-11-28 10:57:57,072 [ scc.git] DEBUG 7 files changed, 67 insertions(+), 39 deletions(-) 2024-11-28 10:57:57,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:57:57,446 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:57:57,483 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:57:57,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:57:57,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:57:57,524 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:57:57,531 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe319bc1f70> has no local changes 2024-11-28 10:57:57,531 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:57:57,540 [ scc.git] DEBUG [detached HEAD 3762386e] merge master -Dorg -Ssuccess-only 2024-11-28 10:57:57,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:57:57,541 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:57:57,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-11-28 10:57:58,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-11-28 10:57:58,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-11-28 10:57:59,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-11-28 10:57:59,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:00,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-11-28 10:58:00,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:00,878 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-11-28 10:58:00,878 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:58:00,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-28 10:58:00,878 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:00,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:00,884 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:58:00,889 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:58:00,889 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:58:00,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:58:00,929 [ scc.git] DEBUG Updating e5b3ca3..3b6c05a 2024-11-28 10:58:01,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls/30 HTTP/1.1" 200 None 2024-11-28 10:58:01,719 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-11-28 10:58:02,056 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-11-28 10:58:02,057 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-11-28 10:58:02,061 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:58:02,061 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:02,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:02,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-11-28 10:58:02,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:02,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-11-28 10:58:02,115 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-11-28 10:58:02,116 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:02,118 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-11-28 10:58:02,118 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-11-28 10:58:02,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:02,263 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:58:02,301 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:02,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:02,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:58:02,342 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:58:02,348 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe319c04e20> has no local changes 2024-11-28 10:58:02,348 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Updating e5b3ca3..3b6c05a Previously merged: - PR 30 jburel 'Build' Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:58:02,356 [ scc.git] DEBUG [detached HEAD 20e564f] merge master -Dorg -Ssuccess-only 2024-11-28 10:58:02,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:58:02,356 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:58:02,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-11-28 10:58:03,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-11-28 10:58:03,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-11-28 10:58:03,725 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:58:04,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-11-28 10:58:04,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:05,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:05,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-11-28 10:58:06,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:06,247 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-11-28 10:58:06,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-11-28 10:58:06,727 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:58:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-11-28 10:58:07,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:08,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:08,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-11-28 10:58:09,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:09,092 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-11-28 10:58:09,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-11-28 10:58:09,608 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:58:10,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-11-28 10:58:10,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:11,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:11,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-11-28 10:58:12,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:12,168 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-11-28 10:58:12,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-11-28 10:58:13,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-11-28 10:58:13,081 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:58:13,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-11-28 10:58:14,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:14,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:15,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-11-28 10:58:15,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:15,551 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-11-28 10:58:16,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-11-28 10:58:16,075 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:58:16,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-11-28 10:58:17,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:17,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:18,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-11-28 10:58:18,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:18,635 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-11-28 10:58:19,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-11-28 10:58:19,125 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-28 10:58:19,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-11-28 10:58:20,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:20,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:21,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-11-28 10:58:21,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:21,566 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-11-28 10:58:21,566 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:58:21,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-28 10:58:21,566 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:21,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:21,572 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:58:21,576 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:58:21,576 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:58:21,582 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:58:21,587 [ scc.git] DEBUG Already up to date. 2024-11-28 10:58:21,587 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-11-28 10:58:21,964 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-28 10:58:21,965 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-11-28 10:58:21,968 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-11-28 10:58:22,245 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-28 10:58:22,245 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-11-28 10:58:22,249 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-11-28 10:58:22,555 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-28 10:58:22,555 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-11-28 10:58:22,560 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-11-28 10:58:22,863 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-28 10:58:22,863 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-11-28 10:58:22,867 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-11-28 10:58:23,155 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-28 10:58:23,155 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-11-28 10:58:23,159 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-11-28 10:58:23,488 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-28 10:58:23,488 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-11-28 10:58:23,491 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:58:23,492 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:23,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:23,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-11-28 10:58:23,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:23,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-11-28 10:58:23,583 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:23,588 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-11-28 10:58:23,588 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-11-28 10:58:23,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:23,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-11-28 10:58:23,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:23,750 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-11-28 10:58:23,842 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-28 10:58:23,843 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:23,848 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-11-28 10:58:23,848 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-11-28 10:58:24,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:24,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-11-28 10:58:24,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:24,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-11-28 10:58:24,219 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-28 10:58:24,219 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-11-28 10:58:24,220 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:58:24,220 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:58:24,225 [ scc.git] DEBUG Calling 'git reset --hard a9d4af971db40a319c84b5364d401096bb066455' 2024-11-28 10:58:24,232 [ scc.git] DEBUG HEAD is now at a9d4af9 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-11-28 10:58:24,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:24,507 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-11-28 10:58:24,512 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-11-28 10:58:24,517 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-11-28 10:58:24,521 [ scc.config] DEBUG Found github.token 2024-11-28 10:58:24,522 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-11-28 10:58:24,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-11-28 10:58:24,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:24,595 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-11-28 10:58:24,731 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-28 10:58:24,732 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:24,736 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-11-28 10:58:24,736 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-11-28 10:58:24,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:24,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-11-28 10:58:24,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:24,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-11-28 10:58:25,006 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-28 10:58:25,006 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:25,011 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-11-28 10:58:25,011 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-11-28 10:58:25,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:25,287 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-11-28 10:58:25,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:25,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-11-28 10:58:25,340 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-28 10:58:25,341 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-11-28 10:58:25,341 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:58:25,341 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:58:25,346 [ scc.git] DEBUG Calling 'git reset --hard e3f931432717295d0917778f93a6177119aa51e1' 2024-11-28 10:58:25,352 [ scc.git] DEBUG HEAD is now at e3f9314 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-11-28 10:58:25,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:25,671 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-11-28 10:58:25,676 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-11-28 10:58:25,681 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-11-28 10:58:25,685 [ scc.config] DEBUG Found github.token 2024-11-28 10:58:25,686 [ scc.git] DEBUG Adding comment to issue #118. 2024-11-28 10:58:26,479 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-11-28 10:58:26,480 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:58:26,518 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:26,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:26,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:58:26,561 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:58:26,568 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe319be3f10> has no local changes 2024-11-28 10:58:26,568 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:58:26,576 [ scc.git] DEBUG [detached HEAD 9d05954] merge master -Dorg -Ssuccess-only 2024-11-28 10:58:26,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:58:26,577 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:58:27,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-11-28 10:58:27,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-11-28 10:58:27,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-11-28 10:58:28,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-11-28 10:58:28,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-11-28 10:58:29,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-11-28 10:58:30,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:30,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:31,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-11-28 10:58:31,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:31,477 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-11-28 10:58:31,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-11-28 10:58:32,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-11-28 10:58:33,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-11-28 10:58:33,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:34,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:34,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-11-28 10:58:34,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:34,944 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-11-28 10:58:35,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-11-28 10:58:35,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-11-28 10:58:36,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-11-28 10:58:36,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:37,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-11-28 10:58:37,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:37,720 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-11-28 10:58:37,721 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:58:37,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-28 10:58:37,721 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:37,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:37,726 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:58:37,731 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:58:37,731 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:58:37,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:58:37,741 [ scc.git] DEBUG Already up to date. 2024-11-28 10:58:37,742 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-11-28 10:58:39,145 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-28 10:58:39,145 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-11-28 10:58:39,148 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-11-28 10:58:41,135 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-28 10:58:41,135 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-11-28 10:58:41,139 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-11-28 10:58:41,546 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-28 10:58:41,546 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-11-28 10:58:41,550 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:58:41,550 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:41,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:41,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-11-28 10:58:41,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:41,566 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-11-28 10:58:41,613 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-11-28 10:58:41,614 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:41,617 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-11-28 10:58:41,617 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-11-28 10:58:41,617 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-11-28 10:58:41,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:41,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-11-28 10:58:41,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:41,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-11-28 10:58:42,002 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-11-28 10:58:42,002 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-11-28 10:58:42,002 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-11-28 10:58:42,002 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-11-28 10:58:42,003 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:42,006 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-11-28 10:58:42,007 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-11-28 10:58:42,007 [ scc.git] DEBUG src/app/header.html | 5 + 2024-11-28 10:58:42,007 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-11-28 10:58:42,007 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-11-28 10:58:42,007 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-11-28 10:58:42,007 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-11-28 10:58:42,007 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-11-28 10:58:42,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:42,156 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-11-28 10:58:42,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:42,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-11-28 10:58:42,203 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-11-28 10:58:42,204 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:42,207 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-11-28 10:58:42,207 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-11-28 10:58:42,207 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-11-28 10:58:42,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:42,551 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:58:42,587 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:42,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:42,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:58:42,628 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:58:42,634 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3183685e0> has no local changes 2024-11-28 10:58:42,634 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:58:42,643 [ scc.git] DEBUG [detached HEAD 720fb2f] merge master -Dorg -Ssuccess-only 2024-11-28 10:58:42,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:58:42,643 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:58:43,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-11-28 10:58:43,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-11-28 10:58:44,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-11-28 10:58:44,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-11-28 10:58:45,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:45,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-11-28 10:58:46,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:46,091 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-11-28 10:58:46,091 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:58:46,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-28 10:58:46,091 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:46,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:46,097 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:58:46,101 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:58:46,102 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:58:46,107 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:58:46,112 [ scc.git] DEBUG Already up to date. 2024-11-28 10:58:46,112 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-11-28 10:58:46,535 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-11-28 10:58:46,535 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-11-28 10:58:46,539 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:58:46,539 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:46,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:46,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-11-28 10:58:46,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:46,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-11-28 10:58:46,564 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:46,567 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-11-28 10:58:46,567 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-11-28 10:58:46,567 [ scc.git] DEBUG requirements.txt | 2 +- 2024-11-28 10:58:46,567 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-11-28 10:58:46,567 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-11-28 10:58:46,567 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-11-28 10:58:46,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:46,724 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:58:46,763 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:46,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:46,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:58:46,804 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:58:46,809 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe318379b50> has no local changes 2024-11-28 10:58:46,810 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:58:46,818 [ scc.git] DEBUG [detached HEAD 3b8dcc8] merge master -Dorg -Ssuccess-only 2024-11-28 10:58:46,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:58:46,818 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:58:47,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-11-28 10:58:47,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None 2024-11-28 10:58:48,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None 2024-11-28 10:58:48,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:49,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:58:49,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None 2024-11-28 10:58:50,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:50,157 [ scc.repo] DEBUG - PR 89 jburel 'Build' 2024-11-28 10:58:50,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-11-28 10:58:51,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-11-28 10:58:51,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-11-28 10:58:52,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:52,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-11-28 10:58:53,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:53,130 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-11-28 10:58:53,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-11-28 10:58:54,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-11-28 10:58:54,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-11-28 10:58:55,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:58:55,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-11-28 10:58:55,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:58:55,906 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-11-28 10:58:55,906 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:58:55,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-28 10:58:55,906 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:55,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:55,912 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:58:55,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:58:55,917 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:58:55,922 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:58:55,927 [ scc.git] DEBUG Already up to date. 2024-11-28 10:58:55,927 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-11-28 10:58:56,522 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-28 10:58:56,522 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-11-28 10:58:56,526 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-11-28 10:58:56,994 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-28 10:58:56,994 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-11-28 10:58:56,998 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head' 2024-11-28 10:58:57,497 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-28 10:58:57,497 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD 2024-11-28 10:58:57,500 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:58:57,501 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:57,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:57,505 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-28 10:58:57,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:57,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-28 10:58:57,842 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-11-28 10:58:57,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-11-28 10:58:57,842 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-11-28 10:58:57,842 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-11-28 10:58:57,842 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:58:57,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:58:57,848 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-28 10:58:57,854 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-28 10:58:58,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:58,001 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-28 10:58:58,007 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-28 10:58:58,086 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-11-28 10:58:58,091 [ scc.config] DEBUG Found github.token 2024-11-28 10:58:58,091 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-11-28 10:58:58,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-28 10:58:58,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:58,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-28 10:58:58,150 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-11-28 10:58:58,150 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-11-28 10:58:58,150 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-11-28 10:58:58,150 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:58:58,151 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:58:58,156 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-28 10:58:58,162 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-28 10:58:58,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:58,415 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-28 10:58:58,421 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-28 10:58:58,426 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-11-28 10:58:58,431 [ scc.config] DEBUG Found github.token 2024-11-28 10:58:58,431 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-11-28 10:58:58,431 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175' 2024-11-28 10:58:58,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:58,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175' 2024-11-28 10:58:58,470 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:58:58,472 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-28 10:58:58,472 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-) 2024-11-28 10:58:58,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:58:58,834 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:58:58,872 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:58:58,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:58:58,877 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:58:58,913 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:58:58,919 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3183217c0> has no local changes 2024-11-28 10:58:58,919 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 89 jburel 'Build' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:58:58,928 [ scc.git] DEBUG [detached HEAD fcba91d] merge master -Dorg -Ssuccess-only 2024-11-28 10:58:58,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:58:58,928 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:58:59,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-11-28 10:58:59,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-11-28 10:59:00,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-11-28 10:59:00,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-11-28 10:59:01,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-11-28 10:59:01,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-11-28 10:59:02,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-11-28 10:59:02,444 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:02,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-28 10:59:02,445 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:02,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:02,450 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:02,455 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:02,455 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:02,460 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:02,472 [ scc.git] DEBUG Updating 5d441c2..fb5ae86 2024-11-28 10:59:03,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None 2024-11-28 10:59:03,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None 2024-11-28 10:59:04,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None 2024-11-28 10:59:05,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None 2024-11-28 10:59:05,139 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:05,139 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:05,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:05,144 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:05,182 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:05,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:05,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:05,223 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:05,229 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe318321640> has no local changes 2024-11-28 10:59:05,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Updating 5d441c2..fb5ae86 Previously merged: - PR 133 jburel 'Build' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:05,237 [ scc.git] DEBUG [detached HEAD 3358982] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:05,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:05,237 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:05,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-11-28 10:59:06,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None 2024-11-28 10:59:06,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None 2024-11-28 10:59:07,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:07,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:59:08,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-11-28 10:59:08,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-11-28 10:59:09,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:09,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-11-28 10:59:10,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:10,027 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-11-28 10:59:10,027 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:10,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-28 10:59:10,027 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:10,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:10,036 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:10,040 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:10,041 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:10,046 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:10,051 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:10,051 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-11-28 10:59:10,379 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-11-28 10:59:10,379 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-11-28 10:59:10,384 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:10,384 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:10,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:10,389 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-11-28 10:59:10,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:10,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-11-28 10:59:10,407 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:59:10,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:10,550 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:10,587 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:10,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:10,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:10,629 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:10,634 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe318380ca0> has no local changes 2024-11-28 10:59:10,634 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:10,642 [ scc.git] DEBUG [detached HEAD 54a438f] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:10,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:10,642 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:11,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-11-28 10:59:11,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None 2024-11-28 10:59:13,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-11-28 10:59:13,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:14,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-11-28 10:59:14,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:14,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-11-28 10:59:15,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None 2024-11-28 10:59:15,459 [ scc.repo] DEBUG - PR 29 jburel 'Build' 2024-11-28 10:59:15,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-11-28 10:59:16,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-11-28 10:59:16,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-11-28 10:59:17,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-11-28 10:59:17,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:18,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-11-28 10:59:18,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:18,933 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-11-28 10:59:18,933 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:18,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-28 10:59:18,934 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:18,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:18,939 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:18,944 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:18,944 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:18,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:18,954 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:18,954 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-11-28 10:59:19,314 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-11-28 10:59:19,314 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-11-28 10:59:19,318 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2024-11-28 10:59:19,949 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-11-28 10:59:19,950 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2024-11-28 10:59:19,954 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:19,954 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:19,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:19,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-11-28 10:59:19,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:19,970 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-11-28 10:59:19,979 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-11-28 10:59:19,980 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:59:19,982 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-11-28 10:59:19,982 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-11-28 10:59:20,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:20,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-11-28 10:59:20,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:20,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-11-28 10:59:20,218 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:59:20,220 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-28 10:59:20,220 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-28 10:59:20,220 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-) 2024-11-28 10:59:20,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:20,510 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:20,547 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:20,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:20,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:20,588 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:20,594 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3183521c0> has no local changes 2024-11-28 10:59:20,595 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:20,603 [ scc.git] DEBUG [detached HEAD 9153ca0] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:20,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:20,603 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:21,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-11-28 10:59:21,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None 2024-11-28 10:59:22,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-11-28 10:59:22,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:23,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:59:23,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-11-28 10:59:23,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:23,926 [ scc.repo] DEBUG - PR 21 jburel 'Build' 2024-11-28 10:59:24,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-11-28 10:59:24,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-11-28 10:59:25,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-11-28 10:59:25,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:26,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-11-28 10:59:26,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:26,827 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-11-28 10:59:26,827 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:26,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-28 10:59:26,827 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:26,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:26,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:26,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:26,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:26,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:26,847 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:26,848 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-11-28 10:59:27,194 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-11-28 10:59:27,194 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-11-28 10:59:27,197 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2024-11-28 10:59:27,598 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-11-28 10:59:27,599 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2024-11-28 10:59:27,603 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:27,603 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:27,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:27,609 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-28 10:59:27,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:27,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-28 10:59:27,653 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG Auto-merging setup.py 2024-11-28 10:59:27,653 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-11-28 10:59:27,654 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:59:27,654 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:59:27,659 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-11-28 10:59:27,665 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-11-28 10:59:27,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:27,804 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-28 10:59:27,809 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-11-28 10:59:27,814 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2024-11-28 10:59:27,819 [ scc.config] DEBUG Found github.token 2024-11-28 10:59:27,819 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-11-28 10:59:27,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-11-28 10:59:27,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:27,829 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-11-28 10:59:27,840 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:59:27,842 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-28 10:59:27,842 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-28 10:59:27,842 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-11-28 10:59:27,842 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-11-28 10:59:27,842 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-11-28 10:59:28,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:28,199 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:28,236 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:28,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:28,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:28,276 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:28,282 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe318352a90> has no local changes 2024-11-28 10:59:28,282 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:28,290 [ scc.git] DEBUG [detached HEAD 232e608] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:28,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:28,290 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:28,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-11-28 10:59:29,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-11-28 10:59:29,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-11-28 10:59:30,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-11-28 10:59:30,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:31,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-11-28 10:59:31,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:31,568 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-11-28 10:59:31,569 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:31,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-28 10:59:31,569 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:31,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:31,574 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:31,579 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:31,579 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:31,584 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:31,590 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:31,590 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-11-28 10:59:32,061 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-11-28 10:59:32,061 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-11-28 10:59:32,065 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:32,065 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:32,066 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:32,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-11-28 10:59:32,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:32,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-11-28 10:59:32,120 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-11-28 10:59:32,123 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-11-28 10:59:32,125 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-11-28 10:59:32,126 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-11-28 10:59:32,126 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-11-28 10:59:32,126 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-11-28 10:59:32,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:32,274 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:32,311 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:32,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:32,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:32,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:32,357 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe31834a760> has no local changes 2024-11-28 10:59:32,357 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:32,366 [ scc.git] DEBUG [detached HEAD 8448c0a] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:32,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:32,366 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:32,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-11-28 10:59:32,685 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:32,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-28 10:59:32,685 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:32,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:32,689 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:32,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:32,694 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:32,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:32,707 [ scc.git] DEBUG Updating aca9e9c..100f6ae 2024-11-28 10:59:33,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None 2024-11-28 10:59:33,326 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:33,327 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:33,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:33,331 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:33,369 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:33,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:33,374 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:33,411 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:33,417 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe318393c10> has no local changes 2024-11-28 10:59:33,417 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Updating aca9e9c..100f6ae Previously merged: - PR 13 jburel 'Build' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:33,425 [ scc.git] DEBUG [detached HEAD fcda09d] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:33,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:33,426 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:33,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-11-28 10:59:34,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-11-28 10:59:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-11-28 10:59:35,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:35,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:59:36,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-11-28 10:59:36,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:36,915 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-11-28 10:59:36,915 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:36,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-28 10:59:36,915 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:36,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:36,920 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:36,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:36,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:36,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:36,935 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:36,935 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-11-28 10:59:37,409 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-11-28 10:59:37,410 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-11-28 10:59:37,414 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:37,414 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:37,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:37,420 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-11-28 10:59:37,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:37,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-11-28 10:59:37,537 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 10:59:37,539 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-28 10:59:37,539 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-28 10:59:37,539 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-11-28 10:59:37,539 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-11-28 10:59:37,539 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-11-28 10:59:37,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:37,677 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:37,713 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:37,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:37,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:37,755 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:37,760 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe31833ff70> has no local changes 2024-11-28 10:59:37,760 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:37,768 [ scc.git] DEBUG [detached HEAD 4591655] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:37,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:37,769 [ scc.git] INFO Overriding base-branch from master to main 2024-11-28 10:59:37,769 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:38,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-11-28 10:59:38,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-11-28 10:59:39,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-11-28 10:59:39,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-11-28 10:59:40,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:40,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:59:41,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None 2024-11-28 10:59:41,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None 2024-11-28 10:59:42,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None 2024-11-28 10:59:42,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:42,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:59:43,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-11-28 10:59:43,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-11-28 10:59:44,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-11-28 10:59:44,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-11-28 10:59:45,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:46,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-11-28 10:59:46,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:46,432 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-11-28 10:59:46,433 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:46,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-28 10:59:46,433 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:46,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:46,438 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-11-28 10:59:46,443 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:46,443 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-11-28 10:59:46,448 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-11-28 10:59:46,454 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:46,455 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-11-28 10:59:46,836 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-11-28 10:59:46,836 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-11-28 10:59:46,840 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:46,840 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:46,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:46,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-28 10:59:46,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:46,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-28 10:59:46,954 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-11-28 10:59:46,954 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-11-28 10:59:46,954 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:59:46,955 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:59:46,959 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-11-28 10:59:46,965 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-11-28 10:59:47,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:47,114 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-28 10:59:47,119 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-11-28 10:59:47,124 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-11-28 10:59:47,128 [ scc.config] DEBUG Found github.token 2024-11-28 10:59:47,129 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-11-28 10:59:47,129 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:47,165 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:47,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:47,170 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:47,206 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:47,211 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3182ebbb0> has no local changes 2024-11-28 10:59:47,211 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:47,219 [ scc.git] DEBUG [detached HEAD a0bba3a] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:47,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:47,219 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:47,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-11-28 10:59:47,553 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:47,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-28 10:59:47,553 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:47,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:47,557 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:47,562 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:47,562 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:47,567 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:47,576 [ scc.git] DEBUG Updating adfa132..70b01ed 2024-11-28 10:59:48,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None 2024-11-28 10:59:48,327 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:48,327 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:48,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:48,331 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:48,368 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:48,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:48,373 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:48,408 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:48,414 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3182c1b80> has no local changes 2024-11-28 10:59:48,414 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Updating adfa132..70b01ed Previously merged: - PR 24 jburel 'Build' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:48,421 [ scc.git] DEBUG [detached HEAD 8f9aa5a] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:48,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:48,422 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:48,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-11-28 10:59:48,739 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:48,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-28 10:59:48,739 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:48,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:48,744 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:48,748 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:48,748 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:48,753 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:48,762 [ scc.git] DEBUG Updating 8da48e1..5bfef29 2024-11-28 10:59:49,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None 2024-11-28 10:59:49,410 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:49,410 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:49,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:49,415 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:49,451 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:49,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:49,456 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:49,492 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:49,497 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3182658b0> has no local changes 2024-11-28 10:59:49,497 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Updating 8da48e1..5bfef29 Previously merged: - PR 36 jburel 'Build' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:49,505 [ scc.git] DEBUG [detached HEAD 71cf10b] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:49,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:49,505 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:49,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-11-28 10:59:50,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-11-28 10:59:50,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-11-28 10:59:51,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-11-28 10:59:51,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:52,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-11-28 10:59:52,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:52,743 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-11-28 10:59:52,743 [ scc.repo] DEBUG ## Branches found: 2024-11-28 10:59:52,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-28 10:59:52,744 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:52,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:52,749 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-28 10:59:52,754 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 10:59:52,754 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-28 10:59:52,759 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-28 10:59:52,764 [ scc.git] DEBUG Already up to date. 2024-11-28 10:59:52,764 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-11-28 10:59:53,080 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-11-28 10:59:53,080 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-11-28 10:59:53,084 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 10:59:53,084 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:53,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:53,089 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-28 10:59:53,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:53,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-28 10:59:53,114 [ scc.git] DEBUG Auto-merging Dockerfile 2024-11-28 10:59:53,114 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-11-28 10:59:53,114 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 10:59:53,115 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 10:59:53,120 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-11-28 10:59:53,126 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-11-28 10:59:53,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 10:59:53,274 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-28 10:59:53,279 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-11-28 10:59:53,284 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-11-28 10:59:53,289 [ scc.config] DEBUG Found github.token 2024-11-28 10:59:53,289 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-11-28 10:59:53,289 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 10:59:53,325 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 10:59:53,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 10:59:53,330 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 10:59:53,365 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 10:59:53,371 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe3182655b0> has no local changes 2024-11-28 10:59:53,371 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 10:59:53,379 [ scc.git] DEBUG [detached HEAD 7490d04] merge master -Dorg -Ssuccess-only 2024-11-28 10:59:53,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 10:59:53,380 [ scc.git] INFO Overriding base-branch from master to develop 2024-11-28 10:59:53,380 [ scc.repo] DEBUG ## PRs found: 2024-11-28 10:59:53,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-11-28 10:59:54,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-11-28 10:59:54,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-11-28 10:59:55,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-28 10:59:55,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 10:59:56,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-28 10:59:56,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-28 10:59:57,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-11-28 10:59:57,360 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-28 10:59:57,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-11-28 10:59:58,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-11-28 10:59:58,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-11-28 10:59:59,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-11-28 10:59:59,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-11-28 11:00:00,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-11-28 11:00:00,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-11-28 11:00:01,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-28 11:00:01,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-28 11:00:02,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-28 11:00:02,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-11-28 11:00:02,874 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-28 11:00:03,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-11-28 11:00:03,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-11-28 11:00:04,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-11-28 11:00:04,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-11-28 11:00:04,949 [ scc.repo] DEBUG ## Branches found: 2024-11-28 11:00:04,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-28 11:00:04,949 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 11:00:04,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 11:00:04,955 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-11-28 11:00:04,960 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-28 11:00:04,960 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-11-28 11:00:04,965 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-11-28 11:00:04,970 [ scc.git] DEBUG Already up to date. 2024-11-28 11:00:04,970 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-11-28 11:00:05,567 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-11-28 11:00:05,568 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-11-28 11:00:05,572 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-11-28 11:00:06,007 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-11-28 11:00:06,008 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-11-28 11:00:06,012 [ scc.git] DEBUG ## Unique users: [] 2024-11-28 11:00:06,012 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 11:00:06,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 11:00:06,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-28 11:00:06,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 11:00:06,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-28 11:00:06,109 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-11-28 11:00:06,109 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-11-28 11:00:06,110 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-28 11:00:06,110 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-28 11:00:06,115 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-28 11:00:06,121 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-28 11:00:06,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:06,262 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-28 11:00:06,268 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-28 11:00:06,273 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#261](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-11-28 11:00:06,277 [ scc.config] DEBUG Found github.token 2024-11-28 11:00:06,278 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-11-28 11:00:06,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-28 11:00:06,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 11:00:06,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-28 11:00:06,311 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-28 11:00:06,313 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-11-28 11:00:06,313 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-11-28 11:00:06,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:06,664 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-28 11:00:06,701 [ scc.git] DEBUG Get sha1 of %s 2024-11-28 11:00:06,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-28 11:00:06,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 11:00:06,742 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 11:00:06,748 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe31830bf10> has no local changes 2024-11-28 11:00:06,748 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 11:00:06,756 [ scc.git] DEBUG [detached HEAD 6dc33dc] merge master -Dorg -Ssuccess-only 2024-11-28 11:00:06,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:06,757 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-28 11:00:06,827 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-11-28 11:00:07,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:07,090 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-11-28 11:00:07,095 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-11-28 11:00:07,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:07,473 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-11-28 11:00:07,478 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-11-28 11:00:07,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:07,878 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-11-28 11:00:07,882 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-11-28 11:00:08,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:08,279 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-11-28 11:00:08,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:08,715 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-11-28 11:00:08,720 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-11-28 11:00:09,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:09,116 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-11-28 11:00:09,120 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-11-28 11:00:09,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:09,518 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-11-28 11:00:09,522 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-11-28 11:00:09,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:09,914 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-11-28 11:00:09,919 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-11-28 11:00:10,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:10,304 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-11-28 11:00:10,309 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-11-28 11:00:10,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:10,698 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-11-28 11:00:10,703 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-11-28 11:00:11,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:11,098 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-11-28 11:00:11,103 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-11-28 11:00:11,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:11,491 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-11-28 11:00:11,495 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-11-28 11:00:11,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:11,891 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-11-28 11:00:12,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:12,317 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-11-28 11:00:12,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:12,742 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-11-28 11:00:12,746 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-11-28 11:00:13,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:13,153 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-11-28 11:00:13,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:13,551 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-11-28 11:00:13,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:13,947 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-11-28 11:00:13,951 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-11-28 11:00:14,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:14,342 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-11-28 11:00:14,346 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-11-28 11:00:14,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:14,726 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-11-28 11:00:14,731 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-11-28 11:00:15,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:15,141 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-11-28 11:00:15,145 [ scc.config] DEBUG Found submodule.scripts.url 2024-11-28 11:00:15,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-28 11:00:15,528 [ scc.config] DEBUG Found submodule.scripts.branch 2024-11-28 11:00:15,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-28 11:00:15,603 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fe31d033e20> has local changes 2024-11-28 11:00:15,604 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`' - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`' - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`' - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`' - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`' Repository: ome/minimal-omero-client Updating 4628e82..ca8c2ea Previously merged: - PR 67 jburel 'Gateway 5.10.0' - PR 68 jburel 'Bump action ' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Updating 027b3e6..4777ef8 Previously merged: - PR 27 jburel 'Build' - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 59 will-moore 'Apply settings to Plate' (status: failure) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating 9b73dd9..11d3587 Previously merged: - PR 165 jburel 'Build' Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Updating e5b3ca3..3b6c05a Previously merged: - PR 30 jburel 'Build' Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 89 jburel 'Build' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Updating 5d441c2..fb5ae86 Previously merged: - PR 133 jburel 'Build' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Updating aca9e9c..100f6ae Previously merged: - PR 13 jburel 'Build' Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Updating adfa132..70b01ed Previously merged: - PR 24 jburel 'Build' Repository: openmicroscopy/omero-webtest Updating 8da48e1..5bfef29 Previously merged: - PR 36 jburel 'Build' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#261 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/261/)' 2024-11-28 11:00:15,617 [ scc.git] DEBUG [detached HEAD f19822a] merge master -Dorg -Ssuccess-only 2024-11-28 11:00:15,617 [ scc.merge] INFO Repository: ome/omero-plugins 2024-11-28 11:00:15,617 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-11-28 11:00:15,617 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,617 [ scc.merge] INFO 2024-11-28 11:00:15,617 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,617 [ scc.merge] INFO - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`' 2024-11-28 11:00:15,617 [ scc.merge] INFO - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`' 2024-11-28 11:00:15,617 [ scc.merge] INFO - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`' 2024-11-28 11:00:15,617 [ scc.merge] INFO - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`' 2024-11-28 11:00:15,617 [ scc.merge] INFO - PR 410 dependabot[bot] 'Bump omero-figure from `24444fe` to `1c67437`' 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-11-28 11:00:15,618 [ scc.merge] INFO Updating 4628e82..ca8c2ea 2024-11-28 11:00:15,618 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 67 jburel 'Gateway 5.10.0' 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 68 jburel 'Bump action ' 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-11-28 11:00:15,618 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-11-28 11:00:15,618 [ scc.merge] INFO Updating 027b3e6..4777ef8 2024-11-28 11:00:15,618 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 27 jburel 'Build' 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-11-28 11:00:15,618 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure) 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-11-28 11:00:15,618 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-11-28 11:00:15,618 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-28 11:00:15,618 [ scc.merge] INFO Updating 9b73dd9..11d3587 2024-11-28 11:00:15,618 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 165 jburel 'Build' 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-11-28 11:00:15,618 [ scc.merge] INFO 2024-11-28 11:00:15,618 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,618 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Repository: ome/omero-figure 2024-11-28 11:00:15,619 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-11-28 11:00:15,619 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-11-28 11:00:15,619 [ scc.merge] INFO Updating e5b3ca3..3b6c05a 2024-11-28 11:00:15,619 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 30 jburel 'Build' 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Repository: ome/omero-gallery 2024-11-28 11:00:15,619 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-11-28 11:00:15,619 [ scc.merge] INFO 2024-11-28 11:00:15,619 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-11-28 11:00:15,619 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-11-28 11:00:15,619 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-11-28 11:00:15,620 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Repository: ome/omero-mapr 2024-11-28 11:00:15,620 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-11-28 11:00:15,620 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Repository: ome/omero-metadata 2024-11-28 11:00:15,620 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 89 jburel 'Build' 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO Repository: ome/omero-parade 2024-11-28 11:00:15,620 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-11-28 11:00:15,620 [ scc.merge] INFO Updating 5d441c2..fb5ae86 2024-11-28 11:00:15,620 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 133 jburel 'Build' 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-11-28 11:00:15,620 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,620 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-11-28 11:00:15,621 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure) 2024-11-28 11:00:15,621 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Repository: ome/omero-rois 2024-11-28 11:00:15,621 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-28 11:00:15,621 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 29 jburel 'Build' 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Repository: ome/omero-signup 2024-11-28 11:00:15,621 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 21 jburel 'Build' 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-11-28 11:00:15,621 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,621 [ scc.merge] INFO Repository: ome/omero-upload 2024-11-28 11:00:15,621 [ scc.merge] INFO Updating aca9e9c..100f6ae 2024-11-28 11:00:15,621 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,621 [ scc.merge] INFO - PR 13 jburel 'Build' 2024-11-28 11:00:15,621 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-11-28 11:00:15,622 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-11-28 11:00:15,622 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure) 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-11-28 11:00:15,622 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-11-28 11:00:15,622 [ scc.merge] INFO Updating adfa132..70b01ed 2024-11-28 11:00:15,622 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 24 jburel 'Build' 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-11-28 11:00:15,622 [ scc.merge] INFO Updating 8da48e1..5bfef29 2024-11-28 11:00:15,622 [ scc.merge] INFO Previously merged: 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 36 jburel 'Build' 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-11-28 11:00:15,622 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-11-28 11:00:15,622 [ scc.merge] INFO 2024-11-28 11:00:15,622 [ scc.merge] INFO Repository: ome/scripts 2024-11-28 11:00:15,622 [ scc.merge] INFO Excluded PRs: 2024-11-28 11:00:15,622 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-11-28 11:00:15,623 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-11-28 11:00:15,623 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-11-28 11:00:15,623 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-11-28 11:00:15,623 [ scc.merge] INFO Already up to date. 2024-11-28 11:00:15,623 [ scc.merge] INFO 2024-11-28 11:00:15,623 [ scc.merge] INFO Merged PRs: 2024-11-28 11:00:15,623 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-28 11:00:15,623 [ scc.merge] INFO 2024-11-28 11:00:15,623 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-28 11:00:15,623 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-28 11:00:15,623 [ scc.merge] INFO 2024-11-28 11:00:15,623 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-28 11:00:15,623 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-28 11:00:15,628 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-28 11:00:15,632 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-28 11:00:15,637 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-28 11:00:15,642 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-28 11:00:15,646 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-28 11:00:15,651 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-28 11:00:15,656 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-28 11:00:15,661 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-28 11:00:15,665 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,670 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-28 11:00:15,670 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-28 11:00:15,675 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-28 11:00:15,679 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-28 11:00:15,684 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-28 11:00:15,689 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-28 11:00:15,693 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-28 11:00:15,698 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,703 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-28 11:00:15,703 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-28 11:00:15,708 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-28 11:00:15,712 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-28 11:00:15,717 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-28 11:00:15,721 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-28 11:00:15,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-28 11:00:15,726 [ scc.git] DEBUG Calling 'git remote' 2024-11-28 11:00:15,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 2e24556] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from c0517ed nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 1c674373 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from fc20959 nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD ca884f0] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-28 11:01:03,070 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-28 11:01:12,104 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-28 11:01:14,506 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-28 11:01:19,102 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-28 11:01:59,669 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS