Started by upstream project "Trigger" build number 623
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-plugins-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master)
Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-plugins.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
> git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-figure.url # timeout=10
> git config -f .gitmodules --get submodule.omero-figure.path # timeout=10
> git config --get submodule.minimal-omero-client.url # timeout=10
> git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10
> git config --get submodule.scripts.url # timeout=10
> git config -f .gitmodules --get submodule.scripts.path # timeout=10
> git config --get submodule.omero-test-infra.url # timeout=10
> git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10
> git config --get submodule.omero-prometheus-tools.url # timeout=10
> git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10
> git config --get submodule.omero-parade.url # timeout=10
> git config -f .gitmodules --get submodule.omero-parade.path # timeout=10
> git config --get submodule.omero-mapr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10
> git config --get submodule.omero-fpbioimage.url # timeout=10
> git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10
> git config --get submodule.omero-iviewer.url # timeout=10
> git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10
> git config --get submodule.omero-gallery.url # timeout=10
> git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10
> git config --get submodule.rOMERO-gateway.url # timeout=10
> git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10
> git config --get submodule.omero-weberror.url # timeout=10
> git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10
> git config --get submodule.omero-cli-render.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10
> git config --get submodule.omero-cli-duplicate.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10
> git config --get submodule.omero-metadata.url # timeout=10
> git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10
> git config --get submodule.omero-webtest.url # timeout=10
> git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10
> git config --get submodule.omero-upload.url # timeout=10
> git config -f .gitmodules --get submodule.omero-upload.path # timeout=10
> git config --get submodule.omero-virtual-microscope.url # timeout=10
> git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10
> git config --get submodule.omero-rois.url # timeout=10
> git config -f .gitmodules --get submodule.omero-rois.path # timeout=10
> git config --get submodule.omero-signup.url # timeout=10
> git config -f .gitmodules --get submodule.omero-signup.path # timeout=10
> git config --get submodule.omero-web-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10
> git config --get submodule.omero-cli-zarr.url # timeout=10
> git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10
> git submodule update --init --recursive omero-figure # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 551
[Pipeline] sh
> git submodule update --init --recursive minimal-omero-client # timeout=10
> git submodule update --init --recursive scripts # timeout=10
> git submodule update --init --recursive omero-test-infra # timeout=10
> git submodule update --init --recursive omero-prometheus-tools # timeout=10
> git submodule update --init --recursive omero-parade # timeout=10
> git submodule update --init --recursive omero-mapr # timeout=10
> git submodule update --init --recursive omero-fpbioimage # timeout=10
> git submodule update --init --recursive omero-iviewer # timeout=10
> git submodule update --init --recursive omero-gallery # timeout=10
> git submodule update --init --recursive rOMERO-gateway # timeout=10
> git submodule update --init --recursive omero-weberror # timeout=10
> git submodule update --init --recursive omero-cli-render # timeout=10
> git submodule update --init --recursive omero-cli-duplicate # timeout=10
> git submodule update --init --recursive omero-metadata # timeout=10
> git submodule update --init --recursive omero-webtest # timeout=10
> git submodule update --init --recursive omero-upload # timeout=10
> git submodule update --init --recursive omero-virtual-microscope # timeout=10
> git submodule update --init --recursive omero-rois # timeout=10
> git submodule update --init --recursive omero-signup # timeout=10
> git submodule update --init --recursive omero-web-zarr # timeout=10
> git submodule update --init --recursive omero-cli-zarr # timeout=10
+ pushd build
~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-plugins-push
+ python3.11 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.2
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-46.0.1-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB)
Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached pygithub-2.8.1-py3-none-any.whl (432 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-46.0.1-cp311-abi3-manylinux_2_34_x86_64.whl (4.6 MB)
Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB)
Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
Using cached requests-2.32.5-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.8.3-py3-none-any.whl (161 kB)
Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.23-py3-none-any.whl (118 kB)
Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.1 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-plugins.git
+ BASE_REPO=omero-plugins.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-09-19 00:37:03,635 [ scc.config] DEBUG Found github.token
2025-09-19 00:37:03,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-19 00:37:03,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:04,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:04,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-19 00:37:04,618 [ scc.gh] DEBUG 4486 remaining from 5000 (Reset at 01:09
2025-09-19 00:37:04,618 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:04,621 [ scc.git] DEBUG Check current status
2025-09-19 00:37:04,621 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:04,623 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-09-19 00:37:04,623 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:04,668 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-19 00:37:04,671 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-19 00:37:04,675 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-19 00:37:04,678 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-09-19 00:37:04,682 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-09-19 00:37:04,684 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-19 00:37:04,687 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-19 00:37:04,690 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-09-19 00:37:04,693 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-19 00:37:04,696 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-09-19 00:37:04,699 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-19 00:37:04,702 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-19 00:37:04,705 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-19 00:37:04,708 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-19 00:37:04,711 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-19 00:37:04,714 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-19 00:37:04,716 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-09-19 00:37:04,719 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-09-19 00:37:04,721 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-19 00:37:04,724 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-19 00:37:04,726 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-19 00:37:04,730 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-09-19 00:37:04,733 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:05,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-09-19 00:37:05,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:05,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:06,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:06,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:06,822 [ scc.git] DEBUG Resetting...
2025-09-19 00:37:06,822 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-19 00:37:06,829 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-09-19 00:37:06,829 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-19 00:37:06,928 [ scc.git] DEBUG Check current status
2025-09-19 00:37:06,928 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:06,931 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378
2025-09-19 00:37:06,931 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:06,976 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-19 00:37:06,978 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-19 00:37:06,982 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-19 00:37:06,985 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-09-19 00:37:06,989 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e)
2025-09-19 00:37:06,991 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-19 00:37:06,994 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-19 00:37:06,997 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4)
2025-09-19 00:37:07,000 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-19 00:37:07,003 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-09-19 00:37:07,006 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-19 00:37:07,009 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-19 00:37:07,012 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-19 00:37:07,015 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-19 00:37:07,018 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-19 00:37:07,020 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-19 00:37:07,023 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-09-19 00:37:07,025 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-09-19 00:37:07,028 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-19 00:37:07,031 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-19 00:37:07,033 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-19 00:37:07,037 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe)
2025-09-19 00:37:07,038 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-09-19 00:37:07,038 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-09-19 00:37:07,038 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-09-19 00:37:07,038 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-09-19 00:37:07,038 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-09-19 00:37:07,038 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:37:07,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-09-19 00:37:07,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-09-19 00:37:07,856 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:37:07,856 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-19 00:37:08,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-09-19 00:37:08,357 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:37:08,357 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-19 00:37:08,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-09-19 00:37:08,826 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:37:08,826 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-19 00:37:08,826 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:37:08,826 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:37:08,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:37:08,829 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:37:08,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:37:08,831 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:37:08,833 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:37:08,836 [ scc.git] DEBUG Already up to date.
2025-09-19 00:37:08,836 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-09-19 00:37:09,131 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-19 00:37:09,131 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-09-19 00:37:09,136 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-09-19 00:37:09,420 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-19 00:37:09,421 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-09-19 00:37:09,426 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-09-19 00:37:09,706 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-19 00:37:09,706 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-09-19 00:37:09,713 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:37:09,713 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:37:09,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:37:09,715 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-19 00:37:09,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:37:09,719 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-19 00:37:09,732 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:37:09,734 [ scc.git] DEBUG scripts | 2 +-
2025-09-19 00:37:09,735 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:37:09,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:09,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-19 00:37:09,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:37:09,905 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-19 00:37:09,918 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:37:09,920 [ scc.git] DEBUG omero-figure | 2 +-
2025-09-19 00:37:09,920 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:37:10,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:10,298 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-19 00:37:10,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:37:10,302 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-19 00:37:10,316 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:37:10,318 [ scc.git] DEBUG omero-iviewer | 2 +-
2025-09-19 00:37:10,318 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:37:10,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:10,705 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:37:10,765 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-09-19 00:37:10,789 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-09-19 00:37:10,802 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-09-19 00:37:10,803 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:37:10,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:37:10,805 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:37:10,880 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f221be1b150> has no local changes
2025-09-19 00:37:10,880 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:37:10,949 [ scc.git] DEBUG [detached HEAD 882c5b9] merge master -Dorg -Snone
2025-09-19 00:37:10,949 [ scc.merge] INFO Repository: ome/omero-plugins
2025-09-19 00:37:10,949 [ scc.merge] INFO Already up to date.
2025-09-19 00:37:10,949 [ scc.merge] INFO
2025-09-19 00:37:10,949 [ scc.merge] INFO Merged PRs:
2025-09-19 00:37:10,950 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-19 00:37:10,950 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-19 00:37:10,950 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-19 00:37:10,950 [ scc.merge] INFO
2025-09-19 00:37:10,950 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-19 00:37:10,950 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'minimal-omero-client'
Synchronizing submodule url for 'omero-cli-duplicate'
Synchronizing submodule url for 'omero-cli-render'
Synchronizing submodule url for 'omero-cli-zarr'
Synchronizing submodule url for 'omero-figure'
Synchronizing submodule url for 'omero-fpbioimage'
Synchronizing submodule url for 'omero-gallery'
Synchronizing submodule url for 'omero-iviewer'
Synchronizing submodule url for 'omero-mapr'
Synchronizing submodule url for 'omero-metadata'
Synchronizing submodule url for 'omero-parade'
Synchronizing submodule url for 'omero-prometheus-tools'
Synchronizing submodule url for 'omero-rois'
Synchronizing submodule url for 'omero-signup'
Synchronizing submodule url for 'omero-test-infra'
Synchronizing submodule url for 'omero-upload'
Synchronizing submodule url for 'omero-virtual-microscope'
Synchronizing submodule url for 'omero-web-zarr'
Synchronizing submodule url for 'omero-weberror'
Synchronizing submodule url for 'omero-webtest'
Synchronizing submodule url for 'rOMERO-gateway'
Synchronizing submodule url for 'scripts'
Submodule path 'omero-cli-zarr': checked out '37ea7000309b4f8b87c5122c138fb59b17ecf86b'
Submodule path 'omero-figure': checked out '66607c99ef10bf7997fe30f3813c6f90c401783a'
Submodule path 'omero-iviewer': checked out 'bb94cf8da960e3283090038b04432f301560f5e4'
Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501'
Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f'
Submodule path 'omero-web-zarr': checked out '00e02072dc29b04eba14c080ca8a0175a1499c15'
Submodule path 'scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
Merge all submodules using repository configuration:
base-branch: master
submodules:
scripts:
base-branch: develop
omero-web-zarr:
base-branch: main
2025-09-19 00:37:18,133 [ scc.config] DEBUG Found github.token
2025-09-19 00:37:18,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-09-19 00:37:18,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:18,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:37:19,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-09-19 00:37:19,175 [ scc.gh] DEBUG 4472 remaining from 5000 (Reset at 01:09
2025-09-19 00:37:19,176 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:19,178 [ scc.git] DEBUG Check current status
2025-09-19 00:37:19,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:19,181 [ scc.git] DEBUG 882c5b9 merge master -Dorg -Snone
2025-09-19 00:37:19,181 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:19,224 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-19 00:37:19,227 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-19 00:37:19,230 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-19 00:37:19,233 [ scc.git] DEBUG +37ea7000309b4f8b87c5122c138fb59b17ecf86b omero-cli-zarr (v0.7.0rc1-2-g37ea700)
2025-09-19 00:37:19,239 [ scc.git] DEBUG +66607c99ef10bf7997fe30f3813c6f90c401783a omero-figure (v7.2.1-82-g66607c99)
2025-09-19 00:37:19,242 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-19 00:37:19,245 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-19 00:37:19,249 [ scc.git] DEBUG +bb94cf8da960e3283090038b04432f301560f5e4 omero-iviewer (v0.16.0-16-gbb94cf8)
2025-09-19 00:37:19,251 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-19 00:37:19,254 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2)
2025-09-19 00:37:19,257 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-19 00:37:19,260 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-19 00:37:19,263 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-19 00:37:19,266 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-19 00:37:19,269 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-19 00:37:19,272 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-19 00:37:19,274 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894)
2025-09-19 00:37:19,277 [ scc.git] DEBUG +00e02072dc29b04eba14c080ca8a0175a1499c15 omero-web-zarr (v0.1.1-10-g00e0207)
2025-09-19 00:37:19,280 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-19 00:37:19,283 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-19 00:37:19,286 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-19 00:37:19,290 [ scc.git] DEBUG +03b9116196e1a799dd18a666559613d912be01a5 scripts (v5.9.1-3-g03b9116)
2025-09-19 00:37:19,292 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:19,292 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-09-19 00:37:19,294 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-web-zarr:
base-branch: main
scripts:
base-branch: develop
2025-09-19 00:37:19,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None
2025-09-19 00:37:20,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:21,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:21,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:21,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:21,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-09-19 00:37:21,524 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:21,526 [ scc.git] DEBUG Check current status
2025-09-19 00:37:21,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:21,528 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0
2025-09-19 00:37:21,528 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:21,564 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:22,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None
2025-09-19 00:37:22,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:22,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:23,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:23,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:23,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:23,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:23,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-09-19 00:37:23,857 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:23,859 [ scc.git] DEBUG Check current status
2025-09-19 00:37:23,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:23,862 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build
2025-09-19 00:37:23,862 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:23,899 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:24,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None
2025-09-19 00:37:24,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:25,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:25,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:26,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:26,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:26,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:26,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-09-19 00:37:26,181 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:26,183 [ scc.git] DEBUG Check current status
2025-09-19 00:37:26,183 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:26,185 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export
2025-09-19 00:37:26,185 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:26,221 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:26,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None
2025-09-19 00:37:27,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:27,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:28,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:28,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:28,456 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:28,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:28,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-09-19 00:37:28,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:28,496 [ scc.git] DEBUG Check current status
2025-09-19 00:37:28,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:28,499 [ scc.git] DEBUG 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0
2025-09-19 00:37:28,499 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:28,535 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:28,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None
2025-09-19 00:37:29,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:29,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:30,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:31,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:31,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:31,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:31,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-09-19 00:37:31,325 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:31,326 [ scc.git] DEBUG Check current status
2025-09-19 00:37:31,327 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:31,329 [ scc.git] DEBUG 66607c99 Merge pull request #605 from MinaEnayat/calib_bar
2025-09-19 00:37:31,329 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:31,365 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:31,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None
2025-09-19 00:37:32,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:32,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:33,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:33,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:33,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:33,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:33,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-09-19 00:37:33,650 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:33,652 [ scc.git] DEBUG Check current status
2025-09-19 00:37:33,653 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:33,655 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build
2025-09-19 00:37:33,655 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:33,691 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:34,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None
2025-09-19 00:37:34,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:35,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:35,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:35,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:35,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:35,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:35,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-09-19 00:37:35,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:35,993 [ scc.git] DEBUG Check current status
2025-09-19 00:37:35,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:35,995 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build
2025-09-19 00:37:35,995 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:36,033 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:36,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None
2025-09-19 00:37:37,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:37,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:37,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:38,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:38,274 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:38,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:38,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-09-19 00:37:38,310 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:38,312 [ scc.git] DEBUG Check current status
2025-09-19 00:37:38,312 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:38,314 [ scc.git] DEBUG bb94cf8 Merge pull request #506 from will-moore/pypi_release_action
2025-09-19 00:37:38,315 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:38,351 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:38,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None
2025-09-19 00:37:39,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:39,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:40,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:40,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:40,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:40,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:40,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-09-19 00:37:40,648 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:40,650 [ scc.git] DEBUG Check current status
2025-09-19 00:37:40,650 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:40,652 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0
2025-09-19 00:37:40,653 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:40,688 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:41,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None
2025-09-19 00:37:41,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:42,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:42,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:42,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:42,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:42,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:42,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-09-19 00:37:42,920 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:42,922 [ scc.git] DEBUG Check current status
2025-09-19 00:37:42,922 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:42,924 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-09-19 00:37:42,925 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:42,961 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:43,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None
2025-09-19 00:37:44,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:44,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:45,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:45,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:45,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:45,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:45,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-09-19 00:37:45,586 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:45,588 [ scc.git] DEBUG Check current status
2025-09-19 00:37:45,588 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:45,591 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build
2025-09-19 00:37:45,591 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:45,627 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:46,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None
2025-09-19 00:37:46,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:47,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:47,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:47,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:47,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:47,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:47,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-09-19 00:37:47,912 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:47,914 [ scc.git] DEBUG Check current status
2025-09-19 00:37:47,914 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:47,916 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build
2025-09-19 00:37:47,916 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:47,952 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:48,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None
2025-09-19 00:37:48,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:49,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:49,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:50,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:50,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:50,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:50,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-09-19 00:37:50,150 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:50,152 [ scc.git] DEBUG Check current status
2025-09-19 00:37:50,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:50,154 [ scc.git] DEBUG bdfeb5e bump sphinx version
2025-09-19 00:37:50,155 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:50,190 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:50,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None
2025-09-19 00:37:51,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:51,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:52,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:52,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:52,445 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:52,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:52,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-09-19 00:37:52,482 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:52,484 [ scc.git] DEBUG Check current status
2025-09-19 00:37:52,484 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:52,486 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build
2025-09-19 00:37:52,486 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:52,523 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:52,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None
2025-09-19 00:37:53,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:53,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:54,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:54,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:54,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:54,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:54,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-09-19 00:37:54,825 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:54,827 [ scc.git] DEBUG Check current status
2025-09-19 00:37:54,827 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:54,829 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support
2025-09-19 00:37:54,829 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:54,867 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:55,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-09-19 00:37:55,233 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-09-19 00:37:55,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None
2025-09-19 00:37:55,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:56,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:57,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:57,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:57,458 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:57,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:57,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-09-19 00:37:57,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:57,496 [ scc.git] DEBUG Check current status
2025-09-19 00:37:57,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:57,499 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build
2025-09-19 00:37:57,499 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:57,537 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:37:57,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None
2025-09-19 00:37:58,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:37:58,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:37:59,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:37:59,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:37:59,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:37:59,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:37:59,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-09-19 00:37:59,796 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:37:59,798 [ scc.git] DEBUG Check current status
2025-09-19 00:37:59,798 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:37:59,800 [ scc.git] DEBUG 160d894 Fix display of code
2025-09-19 00:37:59,800 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:37:59,836 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:38:00,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None
2025-09-19 00:38:00,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:38:01,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:38:01,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:38:02,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:38:02,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:02,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:02,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-09-19 00:38:02,039 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:38:02,041 [ scc.git] DEBUG Check current status
2025-09-19 00:38:02,041 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:38:02,043 [ scc.git] DEBUG 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-09-19 00:38:02,043 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:38:02,079 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:38:02,080 [ scc.git] DEBUG Repository configuration:
base-branch: main
2025-09-19 00:38:02,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None
2025-09-19 00:38:03,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:38:03,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:38:03,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:38:04,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:38:04,377 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:04,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:04,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-09-19 00:38:04,413 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:38:04,415 [ scc.git] DEBUG Check current status
2025-09-19 00:38:04,415 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:38:04,417 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build
2025-09-19 00:38:04,418 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:38:04,453 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:38:04,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-09-19 00:38:04,795 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-09-19 00:38:05,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None
2025-09-19 00:38:05,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:38:06,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:38:06,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:38:07,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:38:07,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:07,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:07,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-09-19 00:38:07,201 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:38:07,203 [ scc.git] DEBUG Check current status
2025-09-19 00:38:07,203 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:38:07,205 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build
2025-09-19 00:38:07,205 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:38:07,241 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:38:07,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-09-19 00:38:07,769 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-09-19 00:38:08,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None
2025-09-19 00:38:08,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:38:08,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:38:09,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:38:09,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:38:09,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:09,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:09,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-09-19 00:38:09,810 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:38:09,812 [ scc.git] DEBUG Check current status
2025-09-19 00:38:09,812 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:38:09,814 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-09-19 00:38:09,814 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:38:09,852 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:38:10,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None
2025-09-19 00:38:10,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:38:11,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:38:11,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:38:12,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:38:12,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:12,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:12,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-09-19 00:38:12,173 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-09-19 00:38:12,175 [ scc.git] DEBUG Check current status
2025-09-19 00:38:12,175 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:38:12,178 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-09-19 00:38:12,178 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:38:12,214 [ scc.config] DEBUG Found remote.origin.url
2025-09-19 00:38:12,215 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-09-19 00:38:12,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-19 00:38:12,584 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-19 00:38:12,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None
2025-09-19 00:38:13,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-09-19 00:38:13,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-09-19 00:38:14,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-09-19 00:38:14,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-09-19 00:38:14,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:14,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:14,808 [ scc.git] DEBUG Resetting...
2025-09-19 00:38:14,808 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-09-19 00:38:14,814 [ scc.git] DEBUG HEAD is now at 882c5b9 merge master -Dorg -Snone
2025-09-19 00:38:14,814 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-09-19 00:38:14,868 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62'
2025-09-19 00:38:14,890 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96'
2025-09-19 00:38:14,909 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052'
2025-09-19 00:38:14,923 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997'
2025-09-19 00:38:14,949 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743'
2025-09-19 00:38:14,960 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-09-19 00:38:14,983 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-09-19 00:38:14,985 [ scc.git] DEBUG Check current status
2025-09-19 00:38:14,985 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-09-19 00:38:14,987 [ scc.git] DEBUG 882c5b9 merge master -Dorg -Snone
2025-09-19 00:38:14,988 [ scc.git] DEBUG Calling 'git submodule status'
2025-09-19 00:38:15,030 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD)
2025-09-19 00:38:15,033 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8)
2025-09-19 00:38:15,036 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c)
2025-09-19 00:38:15,039 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587)
2025-09-19 00:38:15,043 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde)
2025-09-19 00:38:15,046 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a)
2025-09-19 00:38:15,048 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da)
2025-09-19 00:38:15,052 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce)
2025-09-19 00:38:15,055 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da)
2025-09-19 00:38:15,058 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c)
2025-09-19 00:38:15,061 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86)
2025-09-19 00:38:15,063 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378)
2025-09-19 00:38:15,067 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e)
2025-09-19 00:38:15,069 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813)
2025-09-19 00:38:15,072 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6)
2025-09-19 00:38:15,075 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae)
2025-09-19 00:38:15,077 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817)
2025-09-19 00:38:15,080 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313)
2025-09-19 00:38:15,083 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed)
2025-09-19 00:38:15,085 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29)
2025-09-19 00:38:15,088 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d)
2025-09-19 00:38:15,091 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755)
2025-09-19 00:38:15,092 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-09-19 00:38:15,092 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-09-19 00:38:15,092 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-09-19 00:38:15,092 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-09-19 00:38:15,092 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-09-19 00:38:15,092 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-09-19 00:38:15,092 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:38:15,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None
2025-09-19 00:38:15,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None
2025-09-19 00:38:15,919 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:38:16,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-09-19 00:38:17,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:17,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None
2025-09-19 00:38:18,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:18,141 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-19 00:38:18,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None
2025-09-19 00:38:18,641 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:38:19,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-09-19 00:38:19,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:20,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None
2025-09-19 00:38:20,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:20,974 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-19 00:38:21,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None
2025-09-19 00:38:21,479 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:38:22,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-09-19 00:38:22,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:23,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None
2025-09-19 00:38:23,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:23,551 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-19 00:38:23,551 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:38:23,551 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:23,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:23,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:38:23,556 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:38:23,556 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:38:23,558 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:38:23,561 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:23,561 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head'
2025-09-19 00:38:23,877 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-19 00:38:23,877 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD
2025-09-19 00:38:23,883 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head'
2025-09-19 00:38:24,197 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-19 00:38:24,197 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD
2025-09-19 00:38:24,203 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head'
2025-09-19 00:38:24,485 [ scc.git] DEBUG From https://github.com/ome/omero-plugins
2025-09-19 00:38:24,485 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD
2025-09-19 00:38:24,490 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:38:24,491 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:24,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:24,493 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-19 00:38:24,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:24,497 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2'
2025-09-19 00:38:24,500 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:24,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:24,638 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-19 00:38:24,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:24,642 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51'
2025-09-19 00:38:24,645 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:25,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:25,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-19 00:38:25,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:25,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74'
2025-09-19 00:38:25,052 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:25,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:25,450 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:38:25,497 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:25,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:25,499 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:38:25,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2
2025-09-19 00:38:25,888 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:38:25,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-09-19 00:38:25,888 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:25,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:25,890 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:38:25,892 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:38:25,892 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:38:25,895 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:38:25,897 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:25,897 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:38:25,897 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:25,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:25,899 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:38:25,934 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:25,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:25,936 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:25,972 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:38:25,975 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89acf8b650> has no local changes
2025-09-19 00:38:25,975 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/minimal-omero-client
Already up to date.
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:38:25,981 [ scc.git] DEBUG [detached HEAD 3c4733c] merge master -Dorg -Ssuccess-only
2025-09-19 00:38:25,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:25,981 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:38:26,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None
2025-09-19 00:38:27,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None
2025-09-19 00:38:27,167 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:38:27,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-09-19 00:38:28,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:28,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:38:29,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None
2025-09-19 00:38:29,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:29,979 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:38:30,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None
2025-09-19 00:38:31,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None
2025-09-19 00:38:31,067 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:38:31,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-09-19 00:38:31,067 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:31,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:31,070 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:38:31,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:38:31,072 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:38:31,075 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:38:31,078 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:31,078 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2025-09-19 00:38:31,365 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate
2025-09-19 00:38:31,365 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2025-09-19 00:38:31,368 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:38:31,369 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:31,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:31,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-09-19 00:38:31,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:31,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4'
2025-09-19 00:38:31,382 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:38:31,384 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:38:31,384 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:38:31,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:31,531 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:38:31,566 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:31,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:31,568 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:31,602 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:38:31,605 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ad1a7410> has no local changes
2025-09-19 00:38:31,605 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:38:31,610 [ scc.git] DEBUG [detached HEAD a19d52e] merge master -Dorg -Ssuccess-only
2025-09-19 00:38:31,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:31,611 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:38:32,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None
2025-09-19 00:38:32,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/73 HTTP/1.1" 200 None
2025-09-19 00:38:32,652 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:38:33,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-09-19 00:38:33,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:34,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:38:35,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d230161123b7bbfcb9363e02bbe289367c532cdc HTTP/1.1" 200 None
2025-09-19 00:38:35,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d230161123b7bbfcb9363e02bbe289367c532cdc?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:35,733 [ scc.repo] DEBUG - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:38:36,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/71 HTTP/1.1" 200 None
2025-09-19 00:38:37,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-09-19 00:38:37,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:38,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/530b6b0ab1346ef837188b2eb3b1a5f679b490b6 HTTP/1.1" 200 None
2025-09-19 00:38:38,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/530b6b0ab1346ef837188b2eb3b1a5f679b490b6?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:38,533 [ scc.repo] DEBUG - PR 71 dominikl 'Escape slash character in image names'
2025-09-19 00:38:39,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/70 HTTP/1.1" 200 None
2025-09-19 00:38:39,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/69 HTTP/1.1" 200 None
2025-09-19 00:38:40,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-09-19 00:38:40,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:41,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:38:41,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/eb65a6621a6b07771ed3410c81ddaa1731004c22 HTTP/1.1" 200 None
2025-09-19 00:38:42,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/eb65a6621a6b07771ed3410c81ddaa1731004c22?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:42,051 [ scc.repo] DEBUG - PR 69 dominikl 'Fix help text for impo/export commands'
2025-09-19 00:38:42,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None
2025-09-19 00:38:43,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None
2025-09-19 00:38:43,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-09-19 00:38:44,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:44,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:38:45,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None
2025-09-19 00:38:45,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:38:45,594 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate'
2025-09-19 00:38:46,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None
2025-09-19 00:38:46,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None
2025-09-19 00:38:46,512 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:38:46,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-09-19 00:38:46,512 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:46,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:46,515 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:38:46,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:38:46,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:38:46,520 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:38:46,523 [ scc.git] DEBUG Already up to date.
2025-09-19 00:38:46,523 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head'
2025-09-19 00:38:46,809 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-19 00:38:46,809 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD
2025-09-19 00:38:46,813 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-09-19 00:38:47,097 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-19 00:38:47,097 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-09-19 00:38:47,102 [ scc.git] DEBUG Calling 'git fetch origin pull/71/head'
2025-09-19 00:38:47,382 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-19 00:38:47,382 [ scc.git] DEBUG * branch refs/pull/71/head -> FETCH_HEAD
2025-09-19 00:38:47,386 [ scc.git] DEBUG Calling 'git fetch origin pull/73/head'
2025-09-19 00:38:47,665 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render
2025-09-19 00:38:47,665 [ scc.git] DEBUG * branch refs/pull/73/head -> FETCH_HEAD
2025-09-19 00:38:47,670 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:38:47,670 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:47,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:47,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a'
2025-09-19 00:38:47,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:47,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a'
2025-09-19 00:38:47,685 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:38:47,687 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++---------------------
2025-09-19 00:38:47,687 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-)
2025-09-19 00:38:47,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:47,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-09-19 00:38:47,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:47,885 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Fix help text for impo/export commands) eb65a6621a6b07771ed3410c81ddaa1731004c22'
2025-09-19 00:38:47,893 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-09-19 00:38:47,894 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:38:47,896 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++--------
2025-09-19 00:38:47,896 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 8 deletions(-)
2025-09-19 00:38:48,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:48,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-09-19 00:38:48,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:48,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 71 (Escape slash character in image names) 530b6b0ab1346ef837188b2eb3b1a5f679b490b6'
2025-09-19 00:38:48,289 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py
2025-09-19 00:38:48,290 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:38:48,293 [ scc.git] DEBUG src/omero_cli_render.py | 21 ++++++++++++++-------
2025-09-19 00:38:48,293 [ scc.git] DEBUG 1 file changed, 14 insertions(+), 7 deletions(-)
2025-09-19 00:38:48,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:48,666 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-09-19 00:38:48,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:48,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 73 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) d230161123b7bbfcb9363e02bbe289367c532cdc'
2025-09-19 00:38:48,679 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:38:48,682 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:38:48,682 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:38:49,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:38:49,073 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:38:49,108 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:38:49,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:38:49,110 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:38:49,145 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:38:49,148 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89acf64150> has no local changes
2025-09-19 00:38:49,148 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:38:49,153 [ scc.git] DEBUG [detached HEAD 317e2ce] merge master -Dorg -Ssuccess-only
2025-09-19 00:38:49,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:38:49,153 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:38:49,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None
2025-09-19 00:38:50,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None
2025-09-19 00:38:50,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-09-19 00:38:51,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:51,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:38:52,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-09-19 00:38:52,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/4628738fdf646d79d13c2f8a29b391de58ba2b29?per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:53,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29 HTTP/1.1" 200 None
2025-09-19 00:38:53,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4628738fdf646d79d13c2f8a29b391de58ba2b29/status HTTP/1.1" 200 None
2025-09-19 00:38:53,662 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-09-19 00:38:54,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None
2025-09-19 00:38:54,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-09-19 00:38:55,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:55,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:38:56,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-09-19 00:38:56,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/b1ec9c408dd417886a980e3368c0d82bfefe491d?per_page=1 HTTP/1.1" 200 None
2025-09-19 00:38:57,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d HTTP/1.1" 200 None
2025-09-19 00:38:57,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/b1ec9c408dd417886a980e3368c0d82bfefe491d/status HTTP/1.1" 200 None
2025-09-19 00:38:57,699 [ scc.repo] DEBUG - PR 181 will-moore 'Add labels support for import'
2025-09-19 00:38:58,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None
2025-09-19 00:38:58,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None
2025-09-19 00:38:59,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-09-19 00:38:59,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:00,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:39:00,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-09-19 00:39:01,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:01,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None
2025-09-19 00:39:02,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None
2025-09-19 00:39:02,300 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-09-19 00:39:02,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None
2025-09-19 00:39:03,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None
2025-09-19 00:39:03,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None
2025-09-19 00:39:04,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None
2025-09-19 00:39:04,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None
2025-09-19 00:39:05,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None
2025-09-19 00:39:05,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None
2025-09-19 00:39:06,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None
2025-09-19 00:39:06,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None
2025-09-19 00:39:07,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None
2025-09-19 00:39:07,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None
2025-09-19 00:39:08,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None
2025-09-19 00:39:08,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None
2025-09-19 00:39:08,913 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:39:08,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-09-19 00:39:08,914 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:08,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:08,916 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:39:08,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:39:08,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:39:08,922 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:39:08,934 [ scc.git] DEBUG Updating 11d3587..37ea700
2025-09-19 00:39:09,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None
2025-09-19 00:39:10,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None
2025-09-19 00:39:11,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None
2025-09-19 00:39:12,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None
2025-09-19 00:39:12,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None
2025-09-19 00:39:13,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None
2025-09-19 00:39:14,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None
2025-09-19 00:39:14,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None
2025-09-19 00:39:14,852 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head'
2025-09-19 00:39:15,141 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-09-19 00:39:15,141 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD
2025-09-19 00:39:15,146 [ scc.git] DEBUG Calling 'git fetch origin pull/181/head'
2025-09-19 00:39:15,578 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-09-19 00:39:15,579 [ scc.git] DEBUG * branch refs/pull/181/head -> FETCH_HEAD
2025-09-19 00:39:15,581 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head'
2025-09-19 00:39:16,008 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr
2025-09-19 00:39:16,008 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD
2025-09-19 00:39:16,010 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:39:16,010 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:16,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:16,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-09-19 00:39:16,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:16,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-09-19 00:39:16,025 [ scc.git] DEBUG Auto-merging CHANGELOG.md
2025-09-19 00:39:16,025 [ scc.git] DEBUG CONFLICT (content): Merge conflict in CHANGELOG.md
2025-09-19 00:39:16,026 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:39:16,026 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:39:16,028 [ scc.git] DEBUG Calling 'git reset --hard 37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-09-19 00:39:16,032 [ scc.git] DEBUG HEAD is now at 37ea700 Bump version: 0.7.0rc1 → 0.7.1.dev0
2025-09-19 00:39:16,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:16,198 [ scc.git] DEBUG Calling 'git merge-base 37ea7000309b4f8b87c5122c138fb59b17ecf86b bb180dbb97ddc67cd2cf655d56058ba7da765769'
2025-09-19 00:39:16,201 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..37ea7000309b4f8b87c5122c138fb59b17ecf86b'
2025-09-19 00:39:16,203 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- Upstream changes
- CHANGELOG.md
--conflicts
2025-09-19 00:39:16,205 [ scc.config] DEBUG Found github.token
2025-09-19 00:39:16,205 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts.
2025-09-19 00:39:16,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-09-19 00:39:16,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:16,210 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 181 (Add labels support for import) b1ec9c408dd417886a980e3368c0d82bfefe491d'
2025-09-19 00:39:16,217 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:16,220 [ scc.git] DEBUG src/omero_zarr/cli.py | 4 +
2025-09-19 00:39:16,220 [ scc.git] DEBUG src/omero_zarr/import_labels.py | 196 ++++++++++++++++++++++++++++++++
2025-09-19 00:39:16,220 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 7 ++
2025-09-19 00:39:16,220 [ scc.git] DEBUG test/integration/clitest/test_import.py | 19 ++++
2025-09-19 00:39:16,220 [ scc.git] DEBUG 4 files changed, 226 insertions(+)
2025-09-19 00:39:16,220 [ scc.git] DEBUG create mode 100644 src/omero_zarr/import_labels.py
2025-09-19 00:39:16,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:16,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-09-19 00:39:16,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:16,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") 4628738fdf646d79d13c2f8a29b391de58ba2b29'
2025-09-19 00:39:16,607 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py
2025-09-19 00:39:16,607 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:16,610 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 140 ++++++++++++++++++++++++++++++++++++++++--
2025-09-19 00:39:16,610 [ scc.git] DEBUG 1 file changed, 136 insertions(+), 4 deletions(-)
2025-09-19 00:39:16,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:16,986 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:39:17,022 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:17,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:17,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:39:17,059 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:39:17,062 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ad085c90> has no local changes
2025-09-19 00:39:17,062 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PRs (not included):
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:39:17,068 [ scc.git] DEBUG [detached HEAD 33f517f] merge master -Dorg -Ssuccess-only
2025-09-19 00:39:17,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:39:17,068 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:39:17,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2025-09-19 00:39:18,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642 HTTP/1.1" 200 None
2025-09-19 00:39:18,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/642/comments HTTP/1.1" 200 None
2025-09-19 00:39:18,608 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:39:19,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea HTTP/1.1" 200 None
2025-09-19 00:39:19,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:20,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:39:20,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1fe8ad313b090f3c1e95577a9e7a7248ea605fea HTTP/1.1" 200 None
2025-09-19 00:39:21,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1fe8ad313b090f3c1e95577a9e7a7248ea605fea?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:21,223 [ scc.repo] DEBUG - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
2025-09-19 00:39:21,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None
2025-09-19 00:39:22,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None
2025-09-19 00:39:22,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637 HTTP/1.1" 200 None
2025-09-19 00:39:23,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/637/comments HTTP/1.1" 200 None
2025-09-19 00:39:23,323 [ scc.repo] DEBUG # ... Include label: include
2025-09-19 00:39:23,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c HTTP/1.1" 200 None
2025-09-19 00:39:24,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:25,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac58011fe3386095f2e637d128d293d573474a0c HTTP/1.1" 200 None
2025-09-19 00:39:25,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ac58011fe3386095f2e637d128d293d573474a0c?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:25,520 [ scc.repo] DEBUG - PR 637 Rdornier 'Fix scalebar position'
2025-09-19 00:39:26,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630 HTTP/1.1" 200 None
2025-09-19 00:39:26,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/630/comments HTTP/1.1" 200 None
2025-09-19 00:39:27,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-09-19 00:39:27,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:28,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:39:28,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7a71d8f456b659444095e496a4c6d2449c306a29 HTTP/1.1" 200 None
2025-09-19 00:39:29,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7a71d8f456b659444095e496a4c6d2449c306a29?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:29,007 [ scc.repo] DEBUG - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-09-19 00:39:29,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/619 HTTP/1.1" 200 None
2025-09-19 00:39:29,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616 HTTP/1.1" 200 None
2025-09-19 00:39:30,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/616/comments HTTP/1.1" 200 None
2025-09-19 00:39:30,486 [ scc.repo] DEBUG # ... Include label: include
2025-09-19 00:39:31,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce HTTP/1.1" 200 None
2025-09-19 00:39:31,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:32,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/4df87c2fb29b4cb28b030665a560ab13b0ce1fce HTTP/1.1" 200 None
2025-09-19 00:39:32,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/4df87c2fb29b4cb28b030665a560ab13b0ce1fce?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:32,448 [ scc.repo] DEBUG - PR 616 Rdornier 'Fix labels around border'
2025-09-19 00:39:32,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612 HTTP/1.1" 200 None
2025-09-19 00:39:33,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/612/comments HTTP/1.1" 200 None
2025-09-19 00:39:33,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-09-19 00:39:34,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:34,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:39:35,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ae98a37ea474db7d473b99abb884cd4b1fdfb36 HTTP/1.1" 200 None
2025-09-19 00:39:35,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ae98a37ea474db7d473b99abb884cd4b1fdfb36?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:35,803 [ scc.repo] DEBUG - PR 612 will-moore 'Script version'
2025-09-19 00:39:36,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610 HTTP/1.1" 200 None
2025-09-19 00:39:36,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/610/comments HTTP/1.1" 200 None
2025-09-19 00:39:37,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-09-19 00:39:37,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:38,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:39:38,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/59ca9bf79effaded86845d8c49fb94bda6727333 HTTP/1.1" 200 None
2025-09-19 00:39:39,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/59ca9bf79effaded86845d8c49fb94bda6727333?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:39,241 [ scc.repo] DEBUG - PR 610 will-moore 'Add docs/contributing.rst'
2025-09-19 00:39:39,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None
2025-09-19 00:39:40,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None
2025-09-19 00:39:40,301 [ scc.repo] DEBUG # ... Include label: include
2025-09-19 00:39:40,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac2795e13050edd3529a576530d37f558ef0ab0a HTTP/1.1" 200 None
2025-09-19 00:39:41,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac2795e13050edd3529a576530d37f558ef0ab0a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:41,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ac2795e13050edd3529a576530d37f558ef0ab0a HTTP/1.1" 200 None
2025-09-19 00:39:42,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ac2795e13050edd3529a576530d37f558ef0ab0a?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:42,371 [ scc.repo] DEBUG - PR 600 Rdornier 'Label on rois'
2025-09-19 00:39:42,372 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:39:42,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-09-19 00:39:42,372 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:42,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:42,375 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:39:42,378 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:39:42,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:39:42,381 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:39:42,400 [ scc.git] DEBUG Updating 9cc36cde..66607c99
2025-09-19 00:39:43,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None
2025-09-19 00:39:44,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None
2025-09-19 00:39:44,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None
2025-09-19 00:39:45,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None
2025-09-19 00:39:46,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None
2025-09-19 00:39:47,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None
2025-09-19 00:39:47,167 [ scc.git] DEBUG Calling 'git fetch origin pull/600/head'
2025-09-19 00:39:47,785 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:47,785 [ scc.git] DEBUG * branch refs/pull/600/head -> FETCH_HEAD
2025-09-19 00:39:47,788 [ scc.git] DEBUG Calling 'git fetch origin pull/610/head'
2025-09-19 00:39:48,079 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:48,079 [ scc.git] DEBUG * branch refs/pull/610/head -> FETCH_HEAD
2025-09-19 00:39:48,085 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-09-19 00:39:48,367 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:48,368 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-09-19 00:39:48,372 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head'
2025-09-19 00:39:48,664 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:48,664 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD
2025-09-19 00:39:48,668 [ scc.git] DEBUG Calling 'git fetch origin pull/630/head'
2025-09-19 00:39:48,942 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:48,942 [ scc.git] DEBUG * branch refs/pull/630/head -> FETCH_HEAD
2025-09-19 00:39:48,947 [ scc.git] DEBUG Calling 'git fetch origin pull/637/head'
2025-09-19 00:39:49,228 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:49,228 [ scc.git] DEBUG * branch refs/pull/637/head -> FETCH_HEAD
2025-09-19 00:39:49,233 [ scc.git] DEBUG Calling 'git fetch origin pull/642/head'
2025-09-19 00:39:49,518 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2025-09-19 00:39:49,518 [ scc.git] DEBUG * branch refs/pull/642/head -> FETCH_HEAD
2025-09-19 00:39:49,522 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:39:49,522 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:49,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:49,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ac2795e13050edd3529a576530d37f558ef0ab0a'
2025-09-19 00:39:49,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:49,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 600 (Label on rois) ac2795e13050edd3529a576530d37f558ef0ab0a'
2025-09-19 00:39:49,550 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:49,559 [ scc.git] DEBUG .gitignore | 2 +
2025-09-19 00:39:49,559 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 274 +++++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/css/figure.css | 18 +-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 0 -> 2477 bytes
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/index.html | 34 +-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/models/panel_model.js | 69 +-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shapeEditorTest.js | 29 +-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 210 +++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/line.js | 217 +++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/point.js | 205 +++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 209 +++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/rect.js | 214 +++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 425 +++++++++++-
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/shape_editor/text.js | 763 +++++++++++++++++++++
2025-09-19 00:39:49,559 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +-
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/js/views/right_panel_view.js | 121 +++-
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 57 +-
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 186 ++++-
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/shapeEditorTest.html | 37 +-
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 4 +-
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 51 ++
2025-09-19 00:39:49,560 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 382 ++++++++---
2025-09-19 00:39:49,560 [ scc.git] DEBUG 22 files changed, 3285 insertions(+), 224 deletions(-)
2025-09-19 00:39:49,560 [ scc.git] DEBUG create mode 100644 src/images/text-icon-24.png
2025-09-19 00:39:49,560 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/text.js
2025-09-19 00:39:49,560 [ scc.git] DEBUG create mode 100644 src/templates/shapes/shape_sidebar.template.html
2025-09-19 00:39:49,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:49,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...59ca9bf79effaded86845d8c49fb94bda6727333'
2025-09-19 00:39:49,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:49,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 610 (Add docs/contributing.rst) 59ca9bf79effaded86845d8c49fb94bda6727333'
2025-09-19 00:39:49,738 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:49,742 [ scc.git] DEBUG .github/PULL_REQUEST_TEMPLATE.md | 5 +++
2025-09-19 00:39:49,742 [ scc.git] DEBUG README.rst | 4 +-
2025-09-19 00:39:49,742 [ scc.git] DEBUG docs/contributing.md | 89 ++++++++++++++++++++++++++++++++++++++++
2025-09-19 00:39:49,742 [ scc.git] DEBUG 3 files changed, 97 insertions(+), 1 deletion(-)
2025-09-19 00:39:49,742 [ scc.git] DEBUG create mode 100644 .github/PULL_REQUEST_TEMPLATE.md
2025-09-19 00:39:49,742 [ scc.git] DEBUG create mode 100644 docs/contributing.md
2025-09-19 00:39:50,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:50,152 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-09-19 00:39:50,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:50,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Script version) 9ae98a37ea474db7d473b99abb884cd4b1fdfb36'
2025-09-19 00:39:50,186 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-19 00:39:50,186 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:39:50,186 [ scc.git] DEBUG Auto-merging package.json
2025-09-19 00:39:50,186 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-09-19 00:39:50,186 [ scc.git] DEBUG Auto-merging src/index.html
2025-09-19 00:39:50,187 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:50,193 [ scc.git] DEBUG .bumpversion.cfg | 2 +
2025-09-19 00:39:50,193 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 7 +-
2025-09-19 00:39:50,193 [ scc.git] DEBUG omero_figure/urls.py | 3 +
2025-09-19 00:39:50,193 [ scc.git] DEBUG omero_figure/views.py | 54 ++++++++++++++
2025-09-19 00:39:50,193 [ scc.git] DEBUG package-lock.json | 8 +-
2025-09-19 00:39:50,193 [ scc.git] DEBUG package.json | 3 +-
2025-09-19 00:39:50,193 [ scc.git] DEBUG src/css/figure.css | 2 +-
2025-09-19 00:39:50,193 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 ++++++++++++++++++++++
2025-09-19 00:39:50,193 [ scc.git] DEBUG src/index.html | 20 +++--
2025-09-19 00:39:50,193 [ scc.git] DEBUG src/js/views/figure_view.js | 54 ++++++++++++++
2025-09-19 00:39:50,193 [ scc.git] DEBUG vite.config.js | 3 +
2025-09-19 00:39:50,193 [ scc.git] DEBUG 11 files changed, 230 insertions(+), 12 deletions(-)
2025-09-19 00:39:50,193 [ scc.git] DEBUG create mode 100644 src/html/dialogs/scriptManagerDialog.html
2025-09-19 00:39:50,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:50,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4df87c2fb29b4cb28b030665a560ab13b0ce1fce'
2025-09-19 00:39:50,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:50,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border) 4df87c2fb29b4cb28b030665a560ab13b0ce1fce'
2025-09-19 00:39:50,577 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-19 00:39:50,577 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2025-09-19 00:39:50,577 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js
2025-09-19 00:39:50,577 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-09-19 00:39:50,577 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:50,583 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 22 ++++++++++++++--------
2025-09-19 00:39:50,583 [ scc.git] DEBUG src/js/models/panel_model.js | 16 ++++++++++++++++
2025-09-19 00:39:50,583 [ scc.git] DEBUG src/js/views/figure_view.js | 4 +++-
2025-09-19 00:39:50,583 [ scc.git] DEBUG src/js/views/panel_view.js | 21 +++++++++------------
2025-09-19 00:39:50,583 [ scc.git] DEBUG 4 files changed, 42 insertions(+), 21 deletions(-)
2025-09-19 00:39:50,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:50,951 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7a71d8f456b659444095e496a4c6d2449c306a29'
2025-09-19 00:39:50,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:50,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 630 (Fix color and position for ALL new panel insets) 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-09-19 00:39:50,978 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js
2025-09-19 00:39:50,978 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js
2025-09-19 00:39:50,979 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:39:50,979 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:39:50,984 [ scc.git] DEBUG Calling 'git reset --hard 7872a360e20dd3c928d5f8c8a50c98cd894e0547'
2025-09-19 00:39:50,992 [ scc.git] DEBUG HEAD is now at 7872a360 merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border)
2025-09-19 00:39:51,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:51,346 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a 7a71d8f456b659444095e496a4c6d2449c306a29'
2025-09-19 00:39:51,351 [ scc.git] DEBUG Calling 'git diff --name-only 9cc36cde05bde4def7b62b07c2e9ae5f66712e96..66607c99ef10bf7997fe30f3813c6f90c401783a'
2025-09-19 00:39:51,354 [ scc.git] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/js/views/right_panel_view.js
- Upstream changes
- src/js/views/right_panel_view.js
--conflicts
2025-09-19 00:39:51,356 [ scc.config] DEBUG Found github.token
2025-09-19 00:39:51,356 [ scc.git] DEBUG Not adding comment to issue #630, already --conflicts.
2025-09-19 00:39:51,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ac58011fe3386095f2e637d128d293d573474a0c'
2025-09-19 00:39:51,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:51,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 637 (Fix scalebar position) ac58011fe3386095f2e637d128d293d573474a0c'
2025-09-19 00:39:51,388 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
2025-09-19 00:39:51,388 [ scc.git] DEBUG Auto-merging src/css/figure.css
2025-09-19 00:39:51,388 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js
2025-09-19 00:39:51,388 [ scc.git] DEBUG Auto-merging src/templates/scalebar_form.template.html
2025-09-19 00:39:51,388 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/scalebar_form.template.html
2025-09-19 00:39:51,388 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:39:51,389 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:39:51,392 [ scc.git] DEBUG Calling 'git reset --hard 7872a360e20dd3c928d5f8c8a50c98cd894e0547'
2025-09-19 00:39:51,399 [ scc.git] DEBUG HEAD is now at 7872a360 merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border)
2025-09-19 00:39:51,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:51,747 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a ac58011fe3386095f2e637d128d293d573474a0c'
2025-09-19 00:39:51,751 [ scc.git] DEBUG Calling 'git diff --name-only 66607c99ef10bf7997fe30f3813c6f90c401783a..66607c99ef10bf7997fe30f3813c6f90c401783a'
2025-09-19 00:39:51,754 [ scc.git] INFO - PR 637 Rdornier 'Fix scalebar position'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #600 Rdornier 'Label on rois'
- src/templates/scalebar_form.template.html
--conflicts
2025-09-19 00:39:51,756 [ scc.config] DEBUG Found github.token
2025-09-19 00:39:51,756 [ scc.git] DEBUG Not adding comment to issue #637, already --conflicts.
2025-09-19 00:39:51,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fe8ad313b090f3c1e95577a9e7a7248ea605fea'
2025-09-19 00:39:51,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:51,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 642 (Bump vite from 6.2.6 to 6.3.6) 1fe8ad313b090f3c1e95577a9e7a7248ea605fea'
2025-09-19 00:39:51,780 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:39:51,780 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-19 00:39:51,780 [ scc.git] DEBUG Auto-merging package.json
2025-09-19 00:39:51,780 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:39:51,780 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:39:51,785 [ scc.git] DEBUG Calling 'git reset --hard 7872a360e20dd3c928d5f8c8a50c98cd894e0547'
2025-09-19 00:39:51,791 [ scc.git] DEBUG HEAD is now at 7872a360 merge master -Dorg -Ssuccess-only: PR 616 (Fix labels around border)
2025-09-19 00:39:52,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:39:52,155 [ scc.git] DEBUG Calling 'git merge-base 66607c99ef10bf7997fe30f3813c6f90c401783a 1fe8ad313b090f3c1e95577a9e7a7248ea605fea'
2025-09-19 00:39:52,160 [ scc.git] DEBUG Calling 'git diff --name-only d2c6f5bc061df1e02422728732b07ae7a929ccb2..66607c99ef10bf7997fe30f3813c6f90c401783a'
2025-09-19 00:39:52,163 [ scc.git] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #612 will-moore 'Script version'
- package-lock.json
--conflicts
2025-09-19 00:39:52,165 [ scc.config] DEBUG Found github.token
2025-09-19 00:39:52,165 [ scc.git] DEBUG Not adding comment to issue #642, already --conflicts.
2025-09-19 00:39:52,165 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:39:52,202 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:52,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:52,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:39:52,240 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:39:52,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89acf97510> has no local changes
2025-09-19 00:39:52,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..66607c99
Previously merged:
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 616 Rdornier 'Fix labels around border'
Conflicting PRs (not included):
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
- PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:39:52,252 [ scc.git] DEBUG [detached HEAD 2c57757f] merge master -Dorg -Ssuccess-only
2025-09-19 00:39:52,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:39:52,253 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:39:52,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2025-09-19 00:39:53,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None
2025-09-19 00:39:53,449 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:39:54,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-09-19 00:39:54,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:55,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:39:56,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None
2025-09-19 00:39:56,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:56,510 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:39:56,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2025-09-19 00:39:57,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2025-09-19 00:39:57,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-09-19 00:39:58,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:39:58,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2025-09-19 00:39:59,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:39:59,312 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2025-09-19 00:39:59,312 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:39:59,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-09-19 00:39:59,313 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:59,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:59,315 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:39:59,317 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:39:59,317 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:39:59,320 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:39:59,323 [ scc.git] DEBUG Already up to date.
2025-09-19 00:39:59,323 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2025-09-19 00:39:59,613 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-09-19 00:39:59,614 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2025-09-19 00:39:59,618 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head'
2025-09-19 00:39:59,897 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2025-09-19 00:39:59,897 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD
2025-09-19 00:39:59,901 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:39:59,901 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:39:59,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:59,903 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-09-19 00:39:59,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:39:59,908 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2025-09-19 00:39:59,914 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2025-09-19 00:39:59,915 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:39:59,917 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2025-09-19 00:39:59,917 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-09-19 00:40:00,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:00,063 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-09-19 00:40:00,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:00,069 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c'
2025-09-19 00:40:00,076 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:00,078 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:40:00,078 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:40:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:00,486 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:40:00,522 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:00,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:00,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:40:00,559 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:40:00,562 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ad034b90> has no local changes
2025-09-19 00:40:00,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:40:00,567 [ scc.git] DEBUG [detached HEAD b7e9d9f] merge master -Dorg -Ssuccess-only
2025-09-19 00:40:00,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:40:00,567 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:40:01,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2025-09-19 00:40:01,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None
2025-09-19 00:40:02,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None
2025-09-19 00:40:02,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None
2025-09-19 00:40:02,689 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:03,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-09-19 00:40:03,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:04,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:04,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None
2025-09-19 00:40:05,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:05,383 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-09-19 00:40:05,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None
2025-09-19 00:40:06,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None
2025-09-19 00:40:06,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None
2025-09-19 00:40:06,906 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:07,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-09-19 00:40:07,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:08,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:09,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None
2025-09-19 00:40:09,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:09,497 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-09-19 00:40:10,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None
2025-09-19 00:40:10,032 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:10,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-09-19 00:40:11,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:11,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:12,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None
2025-09-19 00:40:12,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:12,545 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-09-19 00:40:13,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2025-09-19 00:40:13,144 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:13,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-09-19 00:40:14,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:14,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:15,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2025-09-19 00:40:15,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:15,695 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-09-19 00:40:16,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2025-09-19 00:40:16,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2025-09-19 00:40:16,673 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:17,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-09-19 00:40:17,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:18,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:18,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2025-09-19 00:40:19,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:19,325 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-09-19 00:40:19,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2025-09-19 00:40:19,788 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:20,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-09-19 00:40:20,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:21,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:21,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2025-09-19 00:40:22,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:22,411 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-09-19 00:40:22,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2025-09-19 00:40:22,879 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:23,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-09-19 00:40:23,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:24,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:25,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2025-09-19 00:40:25,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:25,628 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-09-19 00:40:25,629 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:40:25,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-09-19 00:40:25,629 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:25,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:25,632 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:40:25,634 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:40:25,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:40:25,636 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:40:25,640 [ scc.git] DEBUG Already up to date.
2025-09-19 00:40:25,640 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2025-09-19 00:40:25,922 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:25,922 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2025-09-19 00:40:25,926 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2025-09-19 00:40:26,210 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:26,210 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2025-09-19 00:40:26,214 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2025-09-19 00:40:26,504 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:26,504 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2025-09-19 00:40:26,508 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2025-09-19 00:40:26,780 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:26,780 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2025-09-19 00:40:26,784 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2025-09-19 00:40:27,061 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:27,061 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2025-09-19 00:40:27,065 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2025-09-19 00:40:27,339 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:27,339 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2025-09-19 00:40:27,344 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head'
2025-09-19 00:40:27,618 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2025-09-19 00:40:27,618 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD
2025-09-19 00:40:27,622 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:40:27,623 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:27,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:27,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-09-19 00:40:27,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:27,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2025-09-19 00:40:27,637 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:27,642 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2025-09-19 00:40:27,642 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2025-09-19 00:40:27,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:27,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-09-19 00:40:27,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:27,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2025-09-19 00:40:27,809 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:27,809 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:27,814 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2025-09-19 00:40:27,814 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2025-09-19 00:40:28,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:28,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-09-19 00:40:28,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:28,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-09-19 00:40:28,378 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:28,378 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-19 00:40:28,378 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:40:28,378 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:40:28,381 [ scc.git] DEBUG Calling 'git reset --hard 6ca3e72bc8ff9874033d7912223a7aae77db8b8c'
2025-09-19 00:40:28,385 [ scc.git] DEBUG HEAD is now at 6ca3e72 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2025-09-19 00:40:28,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:28,777 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2025-09-19 00:40:28,780 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-09-19 00:40:28,782 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2025-09-19 00:40:28,784 [ scc.config] DEBUG Found github.token
2025-09-19 00:40:28,784 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2025-09-19 00:40:28,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-09-19 00:40:28,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:28,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2025-09-19 00:40:28,804 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:28,804 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:28,809 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2025-09-19 00:40:28,809 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2025-09-19 00:40:29,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:29,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-09-19 00:40:29,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:29,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2025-09-19 00:40:29,198 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:29,199 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:29,203 [ scc.git] DEBUG package-lock.json | 6 +++---
2025-09-19 00:40:29,203 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2025-09-19 00:40:29,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:29,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-09-19 00:40:29,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:29,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-09-19 00:40:29,599 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:29,599 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-19 00:40:29,599 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:40:29,599 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:40:29,602 [ scc.git] DEBUG Calling 'git reset --hard d4fcc92fd941f75221421b96122fa6093281f556'
2025-09-19 00:40:29,606 [ scc.git] DEBUG HEAD is now at d4fcc92 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-09-19 00:40:29,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:29,981 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2025-09-19 00:40:29,983 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-09-19 00:40:29,986 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2025-09-19 00:40:29,988 [ scc.config] DEBUG Found github.token
2025-09-19 00:40:29,988 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts.
2025-09-19 00:40:29,988 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-09-19 00:40:29,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:29,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-09-19 00:40:30,010 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:30,010 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-19 00:40:30,010 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:40:30,011 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:40:30,013 [ scc.git] DEBUG Calling 'git reset --hard d4fcc92fd941f75221421b96122fa6093281f556'
2025-09-19 00:40:30,017 [ scc.git] DEBUG HEAD is now at d4fcc92 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2025-09-19 00:40:30,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:30,399 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062'
2025-09-19 00:40:30,401 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2025-09-19 00:40:30,404 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
- PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- package-lock.json
--conflicts
2025-09-19 00:40:30,406 [ scc.config] DEBUG Found github.token
2025-09-19 00:40:30,406 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts.
2025-09-19 00:40:30,406 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:40:30,441 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:30,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:30,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:40:30,477 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:40:30,481 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89acf8e090> has no local changes
2025-09-19 00:40:30,481 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:40:30,488 [ scc.git] DEBUG [detached HEAD 259f4d8] merge master -Dorg -Ssuccess-only
2025-09-19 00:40:30,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:40:30,488 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:40:31,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2025-09-19 00:40:31,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None
2025-09-19 00:40:32,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None
2025-09-19 00:40:32,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None
2025-09-19 00:40:33,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None
2025-09-19 00:40:33,237 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:33,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-09-19 00:40:34,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:34,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:35,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None
2025-09-19 00:40:35,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:35,877 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-09-19 00:40:36,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None
2025-09-19 00:40:36,384 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:37,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-09-19 00:40:37,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:38,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:38,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None
2025-09-19 00:40:39,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:39,134 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-09-19 00:40:39,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2025-09-19 00:40:40,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2025-09-19 00:40:40,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2025-09-19 00:40:41,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2025-09-19 00:40:41,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-09-19 00:40:42,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:42,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2025-09-19 00:40:43,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:43,009 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2025-09-19 00:40:43,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2025-09-19 00:40:44,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2025-09-19 00:40:44,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-09-19 00:40:45,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:45,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2025-09-19 00:40:45,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:45,907 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2025-09-19 00:40:46,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2025-09-19 00:40:46,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2025-09-19 00:40:47,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-09-19 00:40:47,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:48,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2025-09-19 00:40:48,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:48,874 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2025-09-19 00:40:49,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None
2025-09-19 00:40:49,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None
2025-09-19 00:40:50,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None
2025-09-19 00:40:50,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:51,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:51,569 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:40:51,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-09-19 00:40:51,569 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:51,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:51,572 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:40:51,574 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:40:51,574 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:40:51,577 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:40:51,584 [ scc.git] DEBUG Updating 7a798ce..bb94cf8
2025-09-19 00:40:52,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None
2025-09-19 00:40:52,204 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2025-09-19 00:40:52,530 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-19 00:40:52,530 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2025-09-19 00:40:52,534 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2025-09-19 00:40:52,821 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-19 00:40:52,821 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2025-09-19 00:40:52,825 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2025-09-19 00:40:53,104 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-19 00:40:53,104 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2025-09-19 00:40:53,108 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head'
2025-09-19 00:40:53,385 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-19 00:40:53,385 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD
2025-09-19 00:40:53,389 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head'
2025-09-19 00:40:53,667 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2025-09-19 00:40:53,667 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD
2025-09-19 00:40:53,671 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:40:53,671 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:53,671 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:53,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-09-19 00:40:53,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:53,680 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2025-09-19 00:40:53,691 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2025-09-19 00:40:53,691 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js
2025-09-19 00:40:53,692 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:53,695 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2025-09-19 00:40:53,695 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2025-09-19 00:40:53,695 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2025-09-19 00:40:53,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:53,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2025-09-19 00:40:53,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:53,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2025-09-19 00:40:53,882 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2025-09-19 00:40:53,882 [ scc.git] DEBUG Auto-merging src/app/context.js
2025-09-19 00:40:53,882 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2025-09-19 00:40:53,882 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2025-09-19 00:40:53,883 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:53,887 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2025-09-19 00:40:53,887 [ scc.git] DEBUG src/app/context.js | 6 +-
2025-09-19 00:40:53,887 [ scc.git] DEBUG src/app/header.html | 5 +
2025-09-19 00:40:53,887 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2025-09-19 00:40:53,887 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2025-09-19 00:40:53,887 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2025-09-19 00:40:53,887 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2025-09-19 00:40:53,887 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2025-09-19 00:40:54,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:54,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2025-09-19 00:40:54,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:54,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2025-09-19 00:40:54,303 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2025-09-19 00:40:54,304 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:54,307 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2025-09-19 00:40:54,307 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2025-09-19 00:40:54,307 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2025-09-19 00:40:54,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:54,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-09-19 00:40:54,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:54,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc'
2025-09-19 00:40:54,699 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:40:54,709 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++---------------------------
2025-09-19 00:40:54,709 [ scc.git] DEBUG package.json | 2 +-
2025-09-19 00:40:54,709 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-)
2025-09-19 00:40:55,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:55,079 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-09-19 00:40:55,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:55,086 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-09-19 00:40:55,119 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:40:55,119 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2025-09-19 00:40:55,119 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:40:55,119 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:40:55,122 [ scc.git] DEBUG Calling 'git reset --hard 64fafbadd21896c01b586ce6699d20c27b0d53da'
2025-09-19 00:40:55,128 [ scc.git] DEBUG HEAD is now at 64fafba merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha)
2025-09-19 00:40:55,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:40:55,482 [ scc.git] DEBUG Calling 'git merge-base bb94cf8da960e3283090038b04432f301560f5e4 45d08b7e29871ecff0386975c975dacd0865bcc4'
2025-09-19 00:40:55,485 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..bb94cf8da960e3283090038b04432f301560f5e4'
2025-09-19 00:40:55,487 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #499 dependabot[bot] 'Bump nanoid and mocha'
- package-lock.json
--conflicts
2025-09-19 00:40:55,489 [ scc.config] DEBUG Found github.token
2025-09-19 00:40:55,489 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts.
2025-09-19 00:40:55,490 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:40:55,525 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:40:55,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:40:55,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:40:55,561 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:40:55,568 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6535d0> has no local changes
2025-09-19 00:40:55,568 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:40:55,576 [ scc.git] DEBUG [detached HEAD 872aee5] merge master -Dorg -Ssuccess-only
2025-09-19 00:40:55,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:40:55,576 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:40:56,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2025-09-19 00:40:56,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None
2025-09-19 00:40:57,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None
2025-09-19 00:40:57,032 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:40:57,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-09-19 00:40:58,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:40:58,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:40:59,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None
2025-09-19 00:40:59,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:40:59,855 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:41:00,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None
2025-09-19 00:41:00,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-09-19 00:41:01,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:01,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-09-19 00:41:02,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:02,308 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:41:03,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-09-19 00:41:03,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-09-19 00:41:04,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-09-19 00:41:04,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:05,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-09-19 00:41:05,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:05,613 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-09-19 00:41:05,614 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:41:05,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-09-19 00:41:05,614 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:05,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:05,616 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:41:05,619 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:41:05,619 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:41:05,621 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:41:05,624 [ scc.git] DEBUG Already up to date.
2025-09-19 00:41:05,624 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-09-19 00:41:05,916 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-09-19 00:41:05,916 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-09-19 00:41:05,920 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-09-19 00:41:06,193 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-09-19 00:41:06,193 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-09-19 00:41:06,197 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head'
2025-09-19 00:41:06,474 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-09-19 00:41:06,474 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD
2025-09-19 00:41:06,478 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:41:06,478 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:06,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:06,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-09-19 00:41:06,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:06,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-09-19 00:41:06,494 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:06,496 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-09-19 00:41:06,496 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-09-19 00:41:06,496 [ scc.git] DEBUG requirements.txt | 2 +-
2025-09-19 00:41:06,496 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-09-19 00:41:06,496 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-09-19 00:41:06,496 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-09-19 00:41:06,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:06,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-09-19 00:41:06,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:06,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-09-19 00:41:06,652 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:06,654 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:41:06,654 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:41:07,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:07,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-09-19 00:41:07,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:07,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-09-19 00:41:07,047 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml
2025-09-19 00:41:07,047 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml
2025-09-19 00:41:07,047 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:41:07,047 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:41:07,050 [ scc.git] DEBUG Calling 'git reset --hard 7af364ab8009fef15f5561304140062d697ba524'
2025-09-19 00:41:07,053 [ scc.git] DEBUG HEAD is now at 7af364a merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI)
2025-09-19 00:41:07,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:07,455 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99'
2025-09-19 00:41:07,457 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a'
2025-09-19 00:41:07,460 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
- .github/workflows/publish_pypi.yml
--conflicts
2025-09-19 00:41:07,462 [ scc.config] DEBUG Found github.token
2025-09-19 00:41:07,462 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts.
2025-09-19 00:41:07,462 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:41:07,497 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:07,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:07,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:41:07,533 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:41:07,536 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac667490> has no local changes
2025-09-19 00:41:07,536 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:41:07,542 [ scc.git] DEBUG [detached HEAD afe4b2f] merge master -Dorg -Ssuccess-only
2025-09-19 00:41:07,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:41:07,542 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:41:07,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-09-19 00:41:08,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-09-19 00:41:08,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-09-19 00:41:09,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-09-19 00:41:09,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:10,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-09-19 00:41:11,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:11,019 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-09-19 00:41:11,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-09-19 00:41:11,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-09-19 00:41:12,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-09-19 00:41:13,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:13,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-09-19 00:41:13,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:13,914 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-09-19 00:41:13,914 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:41:13,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-09-19 00:41:13,914 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:13,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:13,916 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:41:13,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:41:13,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:41:13,921 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:41:13,928 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-09-19 00:41:14,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-09-19 00:41:14,609 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-09-19 00:41:14,916 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-09-19 00:41:14,916 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-09-19 00:41:14,920 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-09-19 00:41:15,201 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-09-19 00:41:15,201 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-09-19 00:41:15,205 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:41:15,205 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:15,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:15,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-09-19 00:41:15,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:15,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-09-19 00:41:15,225 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-09-19 00:41:15,225 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-09-19 00:41:15,226 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-09-19 00:41:15,226 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-09-19 00:41:15,226 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:41:15,226 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:41:15,228 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-19 00:41:15,232 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-09-19 00:41:15,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:15,410 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-09-19 00:41:15,414 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-19 00:41:15,416 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2025-09-19 00:41:15,418 [ scc.config] DEBUG Found github.token
2025-09-19 00:41:15,418 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-09-19 00:41:15,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-09-19 00:41:15,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:15,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-09-19 00:41:15,438 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-09-19 00:41:15,438 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-09-19 00:41:15,438 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-09-19 00:41:15,438 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:41:15,439 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:41:15,441 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-19 00:41:15,446 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-09-19 00:41:15,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:15,809 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-09-19 00:41:15,813 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-09-19 00:41:15,815 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-09-19 00:41:15,817 [ scc.config] DEBUG Found github.token
2025-09-19 00:41:15,817 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-09-19 00:41:15,817 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:41:15,853 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:15,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:15,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:41:15,890 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:41:15,893 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89aed18f50> has no local changes
2025-09-19 00:41:15,893 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:41:15,899 [ scc.git] DEBUG [detached HEAD 7867848] merge master -Dorg -Ssuccess-only
2025-09-19 00:41:15,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:41:15,900 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:41:16,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-09-19 00:41:16,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-09-19 00:41:17,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-09-19 00:41:17,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:18,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:18,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-09-19 00:41:19,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:19,384 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:41:19,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-09-19 00:41:19,854 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:41:20,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-09-19 00:41:20,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:21,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:22,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-09-19 00:41:22,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:22,523 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-09-19 00:41:23,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-09-19 00:41:23,033 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:41:23,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-09-19 00:41:24,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:24,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:25,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-09-19 00:41:25,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:25,678 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-09-19 00:41:26,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-09-19 00:41:26,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-09-19 00:41:27,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-09-19 00:41:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-09-19 00:41:28,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-09-19 00:41:28,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-09-19 00:41:29,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-09-19 00:41:29,050 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:41:29,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-09-19 00:41:29,050 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:29,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:29,053 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:41:29,055 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:41:29,055 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:41:29,058 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:41:29,060 [ scc.git] DEBUG Already up to date.
2025-09-19 00:41:29,060 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-09-19 00:41:29,373 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-09-19 00:41:29,373 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-09-19 00:41:29,377 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-09-19 00:41:29,652 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-09-19 00:41:29,652 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-09-19 00:41:29,656 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-09-19 00:41:29,949 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-09-19 00:41:29,949 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-09-19 00:41:29,953 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:41:29,953 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:29,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:29,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-09-19 00:41:29,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:29,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-09-19 00:41:29,967 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:29,970 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-09-19 00:41:29,970 [ scc.git] DEBUG package.json | 2 +-
2025-09-19 00:41:29,970 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-09-19 00:41:30,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:30,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-09-19 00:41:30,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:30,124 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-09-19 00:41:30,132 [ scc.git] DEBUG Auto-merging package-lock.json
2025-09-19 00:41:30,132 [ scc.git] DEBUG Auto-merging package.json
2025-09-19 00:41:30,133 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:30,135 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-09-19 00:41:30,135 [ scc.git] DEBUG package.json | 2 +-
2025-09-19 00:41:30,135 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-09-19 00:41:30,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:30,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-09-19 00:41:30,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:30,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-09-19 00:41:30,537 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:30,539 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:41:30,540 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:41:30,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:30,936 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:41:30,973 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:30,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:30,975 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:41:31,010 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:41:31,013 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac663490> has no local changes
2025-09-19 00:41:31,013 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:41:31,018 [ scc.git] DEBUG [detached HEAD 79e769a] merge master -Dorg -Ssuccess-only
2025-09-19 00:41:31,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:41:31,019 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:41:31,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2025-09-19 00:41:31,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None
2025-09-19 00:41:31,904 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:41:32,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-09-19 00:41:33,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:33,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:34,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None
2025-09-19 00:41:34,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:34,649 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:41:34,649 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:41:34,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-09-19 00:41:34,649 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:34,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:34,652 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:41:34,654 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:41:34,654 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:41:34,656 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:41:34,659 [ scc.git] DEBUG Already up to date.
2025-09-19 00:41:34,659 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-09-19 00:41:34,951 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2025-09-19 00:41:34,951 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-09-19 00:41:34,956 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:41:34,956 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:34,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:34,958 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e'
2025-09-19 00:41:34,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:34,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e'
2025-09-19 00:41:34,969 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:34,971 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:41:34,971 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:41:35,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:35,128 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:41:35,163 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:35,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:35,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:41:35,200 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:41:35,203 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6708d0> has no local changes
2025-09-19 00:41:35,203 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:41:35,208 [ scc.git] DEBUG [detached HEAD 52dcd2c] merge master -Dorg -Ssuccess-only
2025-09-19 00:41:35,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:41:35,208 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:41:35,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-09-19 00:41:36,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None
2025-09-19 00:41:36,214 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:41:36,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-09-19 00:41:37,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:37,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:38,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-09-19 00:41:39,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:39,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None
2025-09-19 00:41:40,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None
2025-09-19 00:41:40,054 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:41:40,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-09-19 00:41:40,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-09-19 00:41:41,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-09-19 00:41:42,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:42,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:43,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-09-19 00:41:43,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:44,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-09-19 00:41:44,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-09-19 00:41:44,508 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-09-19 00:41:45,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-09-19 00:41:45,014 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:41:45,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-09-19 00:41:45,014 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:45,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:45,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:41:45,019 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:41:45,019 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:41:45,022 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:41:45,024 [ scc.git] DEBUG Already up to date.
2025-09-19 00:41:45,024 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-09-19 00:41:45,313 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-09-19 00:41:45,313 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-09-19 00:41:45,317 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head'
2025-09-19 00:41:45,604 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-09-19 00:41:45,604 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD
2025-09-19 00:41:45,608 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:41:45,608 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:45,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:45,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-09-19 00:41:45,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:45,615 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-09-19 00:41:45,622 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:45,625 [ scc.git] DEBUG setup.py | 4 +-
2025-09-19 00:41:45,625 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-09-19 00:41:45,625 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-09-19 00:41:45,625 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-09-19 00:41:45,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:45,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301'
2025-09-19 00:41:45,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:45,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301'
2025-09-19 00:41:45,776 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:45,778 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:41:45,779 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:41:46,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:46,164 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:41:46,199 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:46,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:46,202 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:41:46,237 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:41:46,240 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6b3610> has no local changes
2025-09-19 00:41:46,240 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:41:46,245 [ scc.git] DEBUG [detached HEAD 16594f3] merge master -Dorg -Ssuccess-only
2025-09-19 00:41:46,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:41:46,245 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:41:46,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-09-19 00:41:47,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None
2025-09-19 00:41:47,232 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:41:47,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-09-19 00:41:48,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:48,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:49,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None
2025-09-19 00:41:49,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:49,879 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:41:50,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-09-19 00:41:50,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-09-19 00:41:51,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-09-19 00:41:51,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:52,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-09-19 00:41:52,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:52,735 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-09-19 00:41:52,735 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:41:52,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-09-19 00:41:52,736 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:52,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:52,738 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:41:52,740 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:41:52,740 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:41:52,743 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:41:52,746 [ scc.git] DEBUG Already up to date.
2025-09-19 00:41:52,746 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-09-19 00:41:53,070 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-09-19 00:41:53,070 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-09-19 00:41:53,075 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-09-19 00:41:53,352 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-09-19 00:41:53,352 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-09-19 00:41:53,356 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:41:53,357 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:53,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:53,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-09-19 00:41:53,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:53,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-09-19 00:41:53,371 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG Auto-merging setup.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-09-19 00:41:53,371 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:41:53,372 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:41:53,374 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-09-19 00:41:53,377 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-09-19 00:41:53,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:53,522 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-09-19 00:41:53,525 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-09-19 00:41:53,528 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- Upstream changes
- setup.py
- omero_signup/signup_settings.py
- omero_signup/urls.py
- omero_signup/views.py
--conflicts
2025-09-19 00:41:53,530 [ scc.config] DEBUG Found github.token
2025-09-19 00:41:53,530 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-09-19 00:41:53,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-09-19 00:41:53,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:53,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa'
2025-09-19 00:41:53,541 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:41:53,543 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:41:53,543 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:41:53,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:41:53,925 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:41:53,961 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:41:53,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:41:53,963 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:41:53,998 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:41:54,001 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89acf65290> has no local changes
2025-09-19 00:41:54,001 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:41:54,006 [ scc.git] DEBUG [detached HEAD 837552a] merge master -Dorg -Ssuccess-only
2025-09-19 00:41:54,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:41:54,007 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:41:54,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-09-19 00:41:55,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-09-19 00:41:55,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-09-19 00:41:56,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:41:56,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:41:57,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-09-19 00:41:57,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:41:57,515 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-09-19 00:41:58,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-09-19 00:41:58,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-09-19 00:41:59,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-09-19 00:41:59,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:00,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:00,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-09-19 00:42:01,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-09-19 00:42:01,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-09-19 00:42:02,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-09-19 00:42:02,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-09-19 00:42:03,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:03,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-09-19 00:42:04,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:04,140 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-09-19 00:42:04,140 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:04,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-09-19 00:42:04,140 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:04,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:04,143 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:42:04,145 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:04,145 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:42:04,148 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:42:04,151 [ scc.git] DEBUG Already up to date.
2025-09-19 00:42:04,151 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-09-19 00:42:04,446 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-09-19 00:42:04,447 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-09-19 00:42:04,451 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-09-19 00:42:04,735 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-09-19 00:42:04,735 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-09-19 00:42:04,739 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:04,739 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:04,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:04,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-09-19 00:42:04,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:04,748 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-09-19 00:42:04,757 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-09-19 00:42:04,760 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-09-19 00:42:04,761 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-09-19 00:42:04,762 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-09-19 00:42:04,762 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-09-19 00:42:04,762 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-09-19 00:42:04,762 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-09-19 00:42:04,762 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-09-19 00:42:04,762 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-09-19 00:42:04,762 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-09-19 00:42:04,762 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-09-19 00:42:04,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:04,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-09-19 00:42:04,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:04,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-09-19 00:42:04,933 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:04,936 [ scc.git] DEBUG docker | 1 +
2025-09-19 00:42:04,936 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-09-19 00:42:05,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:05,454 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:05,490 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:05,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:05,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:05,526 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:05,529 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6a04d0> has no local changes
2025-09-19 00:42:05,529 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:05,535 [ scc.git] DEBUG [detached HEAD 7ffe3ea] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:05,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:05,535 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:06,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None
2025-09-19 00:42:06,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None
2025-09-19 00:42:06,778 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:42:07,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-09-19 00:42:07,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:08,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:08,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None
2025-09-19 00:42:09,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:09,337 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:09,337 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:09,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-09-19 00:42:09,337 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:09,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:09,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:42:09,341 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:09,342 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:42:09,344 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:42:09,347 [ scc.git] DEBUG Already up to date.
2025-09-19 00:42:09,347 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-09-19 00:42:09,639 [ scc.git] DEBUG From https://github.com/ome/omero-upload
2025-09-19 00:42:09,639 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-09-19 00:42:09,643 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:09,643 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:09,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:09,645 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-09-19 00:42:09,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:09,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea'
2025-09-19 00:42:09,656 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:09,658 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:42:09,658 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:42:09,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:09,804 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:09,839 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:09,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:09,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:09,877 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:09,880 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6d5950> has no local changes
2025-09-19 00:42:09,880 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:09,885 [ scc.git] DEBUG [detached HEAD cf1c1c7] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:09,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:09,885 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:10,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2025-09-19 00:42:10,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None
2025-09-19 00:42:10,825 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:42:11,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-09-19 00:42:11,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:12,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:13,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None
2025-09-19 00:42:13,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:13,510 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:13,510 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:13,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-09-19 00:42:13,510 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:13,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:13,513 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:42:13,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:13,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:42:13,518 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:42:13,524 [ scc.git] DEBUG Updating deab817..160d894
2025-09-19 00:42:14,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-09-19 00:42:14,218 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head'
2025-09-19 00:42:14,511 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2025-09-19 00:42:14,511 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD
2025-09-19 00:42:14,515 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:14,515 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:14,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:14,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-09-19 00:42:14,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:14,523 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902'
2025-09-19 00:42:14,529 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:14,531 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:42:14,531 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:42:14,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:14,692 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:14,727 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:14,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:14,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:14,763 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:14,766 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6a5250> has no local changes
2025-09-19 00:42:14,766 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:14,771 [ scc.git] DEBUG [detached HEAD c5e08df] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:14,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:14,772 [ scc.git] INFO Overriding base-branch from master to main
2025-09-19 00:42:14,772 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:15,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-09-19 00:42:15,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None
2025-09-19 00:42:16,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None
2025-09-19 00:42:16,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-09-19 00:42:17,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:17,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:18,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None
2025-09-19 00:42:18,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:18,655 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import'
2025-09-19 00:42:19,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-09-19 00:42:19,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-09-19 00:42:20,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-09-19 00:42:20,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-09-19 00:42:21,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:21,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-09-19 00:42:22,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:22,000 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-09-19 00:42:22,000 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:22,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-09-19 00:42:22,000 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:22,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:22,003 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-09-19 00:42:22,005 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:22,005 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-09-19 00:42:22,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-09-19 00:42:22,014 [ scc.git] DEBUG Updating 8f3c313..00e0207
2025-09-19 00:42:22,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None
2025-09-19 00:42:22,710 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-09-19 00:42:22,993 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-09-19 00:42:22,993 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-09-19 00:42:22,997 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2025-09-19 00:42:23,276 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-09-19 00:42:23,276 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2025-09-19 00:42:23,280 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:23,280 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:23,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:23,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-09-19 00:42:23,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:23,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-09-19 00:42:23,294 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-09-19 00:42:23,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-09-19 00:42:23,294 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-09-19 00:42:23,294 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:42:23,295 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:42:23,297 [ scc.git] DEBUG Calling 'git reset --hard 00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-09-19 00:42:23,300 [ scc.git] DEBUG HEAD is now at 00e0207 Merge pull request #20 from will-moore/zarr_python_v3
2025-09-19 00:42:23,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:23,453 [ scc.git] DEBUG Calling 'git merge-base 00e02072dc29b04eba14c080ca8a0175a1499c15 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-09-19 00:42:23,455 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..00e02072dc29b04eba14c080ca8a0175a1499c15'
2025-09-19 00:42:23,458 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-09-19 00:42:23,460 [ scc.config] DEBUG Found github.token
2025-09-19 00:42:23,460 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-09-19 00:42:23,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-09-19 00:42:23,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:23,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc'
2025-09-19 00:42:23,471 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py
2025-09-19 00:42:23,472 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:23,475 [ scc.git] DEBUG README.rst | 3 +
2025-09-19 00:42:23,475 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++
2025-09-19 00:42:23,475 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 +
2025-09-19 00:42:23,475 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++-
2025-09-19 00:42:23,475 [ scc.git] DEBUG setup.py | 5 +-
2025-09-19 00:42:23,475 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-)
2025-09-19 00:42:23,475 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html
2025-09-19 00:42:23,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:23,894 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:23,929 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:23,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:23,931 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:23,965 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:23,969 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89acf57f10> has no local changes
2025-09-19 00:42:23,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:23,974 [ scc.git] DEBUG [detached HEAD d1f1be4] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:23,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:23,974 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:24,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None
2025-09-19 00:42:24,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None
2025-09-19 00:42:24,904 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:42:25,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-09-19 00:42:26,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:26,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:27,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None
2025-09-19 00:42:27,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:27,434 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:27,435 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:27,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-09-19 00:42:27,435 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:27,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:27,437 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:42:27,439 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:27,440 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:42:27,442 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:42:27,445 [ scc.git] DEBUG Already up to date.
2025-09-19 00:42:27,445 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head'
2025-09-19 00:42:27,737 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror
2025-09-19 00:42:27,737 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD
2025-09-19 00:42:27,741 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:27,741 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:27,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:27,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-09-19 00:42:27,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:27,748 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9'
2025-09-19 00:42:27,754 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:27,756 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:42:27,756 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:42:27,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:27,897 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:27,933 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:27,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:27,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:27,970 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:27,973 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6a1410> has no local changes
2025-09-19 00:42:27,974 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:27,979 [ scc.git] DEBUG [detached HEAD 1651568] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:27,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:27,979 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:28,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None
2025-09-19 00:42:28,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None
2025-09-19 00:42:28,939 [ scc.repo] DEBUG # ... Include label: dependencies
2025-09-19 00:42:29,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-09-19 00:42:30,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:30,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:31,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None
2025-09-19 00:42:31,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:31,553 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:31,553 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:31,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-09-19 00:42:31,554 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:31,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:31,556 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:42:31,558 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:31,558 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:42:31,561 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:42:31,563 [ scc.git] DEBUG Already up to date.
2025-09-19 00:42:31,563 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head'
2025-09-19 00:42:31,868 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest
2025-09-19 00:42:31,869 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD
2025-09-19 00:42:31,872 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:31,872 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:31,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:31,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-09-19 00:42:31,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:31,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478'
2025-09-19 00:42:31,885 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:31,888 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-09-19 00:42:31,888 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-09-19 00:42:32,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:32,028 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:32,064 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:32,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:32,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:32,101 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:32,104 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac67f9d0> has no local changes
2025-09-19 00:42:32,104 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:32,109 [ scc.git] DEBUG [detached HEAD 4e124d4] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:32,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:32,109 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:32,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-09-19 00:42:33,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-09-19 00:42:33,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-09-19 00:42:34,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-09-19 00:42:34,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:35,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-09-19 00:42:35,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:35,475 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-09-19 00:42:35,475 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:35,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-09-19 00:42:35,475 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:35,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:35,478 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-09-19 00:42:35,480 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:35,480 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-09-19 00:42:35,482 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-09-19 00:42:35,485 [ scc.git] DEBUG Already up to date.
2025-09-19 00:42:35,485 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-09-19 00:42:35,766 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-09-19 00:42:35,766 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-09-19 00:42:35,770 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:35,771 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:35,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:35,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-09-19 00:42:35,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:35,778 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-09-19 00:42:35,785 [ scc.git] DEBUG Auto-merging Dockerfile
2025-09-19 00:42:35,785 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-09-19 00:42:35,785 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:42:35,786 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:42:35,788 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-09-19 00:42:35,792 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-09-19 00:42:35,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:35,933 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-09-19 00:42:35,936 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-09-19 00:42:35,938 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-09-19 00:42:35,940 [ scc.config] DEBUG Found github.token
2025-09-19 00:42:35,940 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-09-19 00:42:35,940 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:35,975 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:35,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:35,977 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:36,011 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:36,015 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac6fdcd0> has no local changes
2025-09-19 00:42:36,015 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:36,020 [ scc.git] DEBUG [detached HEAD bd6aeba] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:36,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:36,021 [ scc.git] INFO Overriding base-branch from master to develop
2025-09-19 00:42:36,021 [ scc.repo] DEBUG ## PRs found:
2025-09-19 00:42:36,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-09-19 00:42:36,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-09-19 00:42:37,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-09-19 00:42:37,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-09-19 00:42:38,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:39,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-09-19 00:42:39,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-09-19 00:42:39,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:39,929 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-09-19 00:42:40,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-09-19 00:42:40,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-09-19 00:42:41,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-09-19 00:42:41,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-09-19 00:42:42,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-09-19 00:42:42,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-09-19 00:42:42,800 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-09-19 00:42:43,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-09-19 00:42:43,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-09-19 00:42:44,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-09-19 00:42:44,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-09-19 00:42:44,706 [ scc.repo] DEBUG ## Branches found:
2025-09-19 00:42:44,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-09-19 00:42:44,707 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:44,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:44,709 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-09-19 00:42:44,711 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-09-19 00:42:44,712 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-09-19 00:42:44,714 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-09-19 00:42:44,723 [ scc.git] DEBUG Updating 4b4c755..03b9116
2025-09-19 00:42:45,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None
2025-09-19 00:42:45,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-09-19 00:42:46,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-09-19 00:42:46,638 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-09-19 00:42:46,967 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-09-19 00:42:46,967 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-09-19 00:42:46,971 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-09-19 00:42:47,266 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-09-19 00:42:47,266 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-09-19 00:42:47,270 [ scc.git] DEBUG ## Unique users: []
2025-09-19 00:42:47,270 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:47,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:47,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-09-19 00:42:47,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:47,279 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-09-19 00:42:47,288 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-09-19 00:42:47,289 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-09-19 00:42:47,289 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-09-19 00:42:47,291 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5'
2025-09-19 00:42:47,294 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2025-09-19 00:42:47,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:47,438 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-09-19 00:42:47,443 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5'
2025-09-19 00:42:47,446 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#536](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-09-19 00:42:47,448 [ scc.config] DEBUG Found github.token
2025-09-19 00:42:47,448 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-09-19 00:42:47,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-09-19 00:42:47,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:47,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-09-19 00:42:47,462 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-09-19 00:42:47,465 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-09-19 00:42:47,465 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-09-19 00:42:47,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:47,828 [ scc.git] DEBUG Calling 'git submodule update'
2025-09-19 00:42:47,863 [ scc.git] DEBUG Get sha1 of %s
2025-09-19 00:42:47,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-09-19 00:42:47,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:47,901 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:47,904 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ac670f50> has no local changes
2025-09-19 00:42:47,904 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:47,909 [ scc.git] DEBUG [detached HEAD 408bade] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:47,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:47,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-09-19 00:42:47,981 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-09-19 00:42:48,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:48,238 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-09-19 00:42:48,240 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-09-19 00:42:48,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:48,635 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-09-19 00:42:48,637 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-09-19 00:42:49,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:49,199 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-09-19 00:42:49,201 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-09-19 00:42:49,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:49,608 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-09-19 00:42:50,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:50,008 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-09-19 00:42:50,009 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-09-19 00:42:50,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:50,561 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-09-19 00:42:50,562 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-09-19 00:42:50,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:50,973 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-09-19 00:42:50,975 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-09-19 00:42:51,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:51,358 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-09-19 00:42:51,360 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-09-19 00:42:51,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:51,749 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-09-19 00:42:51,751 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-09-19 00:42:52,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:52,141 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-09-19 00:42:52,143 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-09-19 00:42:52,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:52,526 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-09-19 00:42:52,528 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-09-19 00:42:52,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:52,931 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-09-19 00:42:52,933 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-09-19 00:42:53,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:53,384 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-09-19 00:42:53,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:53,790 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-09-19 00:42:54,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:54,181 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-09-19 00:42:54,183 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-09-19 00:42:54,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:54,743 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-09-19 00:42:55,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:55,140 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-09-19 00:42:55,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:55,528 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-09-19 00:42:55,530 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-09-19 00:42:55,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:55,983 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-09-19 00:42:55,985 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-09-19 00:42:56,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:56,370 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-09-19 00:42:56,372 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-09-19 00:42:56,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:56,775 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-09-19 00:42:56,777 [ scc.config] DEBUG Found submodule.scripts.url
2025-09-19 00:42:57,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-09-19 00:42:57,189 [ scc.config] DEBUG Found submodule.scripts.branch
2025-09-19 00:42:57,189 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-09-19 00:42:57,264 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f89ad058150> has local changes
2025-09-19 00:42:57,264 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
- PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..37ea700
Previously merged:
- PR 180 will-moore 'Import command'
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 181 will-moore 'Add labels support for import'
- PR 182 will-moore 'Revert "Remove support for Plate import"'
Conflicting PRs (not included):
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..66607c99
Previously merged:
- PR 605 Tom-TBT 'Colorbar feature'
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 616 Rdornier 'Fix labels around border'
Conflicting PRs (not included):
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
- PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
- PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
- PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Merged PRs:
- PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Merged PRs:
- PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Updating 8f3c313..00e0207
Previously merged:
- PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
Merged PRs:
- PR 21 will-moore 'Web zarr import'
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Merged PRs:
- PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: openmicroscopy/omero-webtest
Already up to date.
Merged PRs:
- PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..03b9116
Previously merged:
- PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#536 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/536/)'
2025-09-19 00:42:57,274 [ scc.git] DEBUG [detached HEAD e024c96] merge master -Dorg -Ssuccess-only
2025-09-19 00:42:57,274 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-09-19 00:42:57,274 [ scc.merge] INFO Repository: ome/omero-plugins
2025-09-19 00:42:57,274 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,274 [ scc.merge] INFO
2025-09-19 00:42:57,274 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,274 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-09-19 00:42:57,275 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-09-19 00:42:57,275 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-09-19 00:42:57,275 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-09-19 00:42:57,275 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 73 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-09-19 00:42:57,275 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (exclude comment)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-09-19 00:42:57,275 [ scc.merge] INFO Updating 11d3587..37ea700
2025-09-19 00:42:57,275 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 180 will-moore 'Import command'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,275 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import'
2025-09-19 00:42:57,275 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"'
2025-09-19 00:42:57,275 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Repository: ome/omero-figure
2025-09-19 00:42:57,276 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-09-19 00:42:57,276 [ scc.merge] INFO Updating 9cc36cde..66607c99
2025-09-19 00:42:57,276 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 642 dependabot[bot] 'Bump vite from 6.2.6 to 6.3.6'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-09-19 00:42:57,276 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Repository: ome/omero-gallery
2025-09-19 00:42:57,276 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-09-19 00:42:57,276 [ scc.merge] INFO
2025-09-19 00:42:57,276 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-09-19 00:42:57,276 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,276 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-09-19 00:42:57,277 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-09-19 00:42:57,277 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Repository: ome/omero-mapr
2025-09-19 00:42:57,277 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-09-19 00:42:57,277 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Repository: ome/omero-metadata
2025-09-19 00:42:57,277 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-09-19 00:42:57,277 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Repository: ome/omero-parade
2025-09-19 00:42:57,277 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-09-19 00:42:57,277 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-09-19 00:42:57,277 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-09-19 00:42:57,277 [ scc.merge] INFO
2025-09-19 00:42:57,277 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-09-19 00:42:57,277 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Repository: ome/omero-rois
2025-09-19 00:42:57,278 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-09-19 00:42:57,278 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Repository: ome/omero-signup
2025-09-19 00:42:57,278 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-09-19 00:42:57,278 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-09-19 00:42:57,278 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Repository: ome/omero-upload
2025-09-19 00:42:57,278 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-09-19 00:42:57,278 [ scc.merge] INFO Updating deab817..160d894
2025-09-19 00:42:57,278 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,278 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-09-19 00:42:57,278 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-09-19 00:42:57,278 [ scc.merge] INFO Updating 8f3c313..00e0207
2025-09-19 00:42:57,278 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,278 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints'
2025-09-19 00:42:57,278 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-09-19 00:42:57,279 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-09-19 00:42:57,279 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-09-19 00:42:57,279 [ scc.merge] INFO Already up to date.
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Repository: ome/scripts
2025-09-19 00:42:57,279 [ scc.merge] INFO Excluded PRs:
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-09-19 00:42:57,279 [ scc.merge] INFO Updating 4b4c755..03b9116
2025-09-19 00:42:57,279 [ scc.merge] INFO Previously merged:
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows'
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Merged PRs:
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] INFO Conflicting PRs (not included):
2025-09-19 00:42:57,279 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-09-19 00:42:57,279 [ scc.merge] INFO
2025-09-19 00:42:57,279 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-09-19 00:42:57,279 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-09-19 00:42:57,281 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-09-19 00:42:57,283 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-09-19 00:42:57,285 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-09-19 00:42:57,287 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-09-19 00:42:57,289 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-09-19 00:42:57,291 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-09-19 00:42:57,294 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-09-19 00:42:57,296 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-09-19 00:42:57,298 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-09-19 00:42:57,301 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-09-19 00:42:57,303 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-09-19 00:42:57,305 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-09-19 00:42:57,307 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-09-19 00:42:57,309 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-09-19 00:42:57,311 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-09-19 00:42:57,313 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-09-19 00:42:57,315 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-09-19 00:42:57,317 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-09-19 00:42:57,319 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-09-19 00:42:57,321 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-09-19 00:42:57,323 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-09-19 00:42:57,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-09-19 00:42:57,325 [ scc.git] DEBUG Calling 'git remote'
2025-09-19 00:42:57,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 4b6d0a1] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD d103e0b] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-09-19 00:43:43,403 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-09-19 00:43:52,855 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-09-19 00:43:55,341 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-19 00:44:00,122 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-09-19 00:44:40,779 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS