Started by upstream project "Trigger" build number 394
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
> git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision d392493f4cba2796226db2dc2ee9d4e1592cafd6 (refs/remotes/origin/master)
Commit message: "Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10
> git rev-list --no-walk d392493f4cba2796226db2dc2ee9d4e1592cafd6 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 350
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-py.url # timeout=10
> git config -f .gitmodules --get submodule.omero-py.path # timeout=10
> git config --get submodule.omero-web.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web.path # timeout=10
> git config --get submodule.omero-marshal.url # timeout=10
> git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
> git config --get submodule.omero-dropbox.url # timeout=10
> git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
> git config --get submodule.omero-scripts.url # timeout=10
> git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
> git submodule update --init --recursive omero-py # timeout=10
> git submodule update --init --recursive omero-web # timeout=10
> git submodule update --init --recursive omero-marshal # timeout=10
> git submodule update --init --recursive omero-dropbox # timeout=10
> git submodule update --init --recursive omero-scripts # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
Using cached pip-25.0.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 21.2.3
Uninstalling pip-21.2.3:
Successfully uninstalled pip-21.2.3
Successfully installed pip-25.0.1
+ python3 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
Using cached certifi-2025.1.31-py3-none-any.whl (166 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB)
Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached wrapt-1.17.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-03-08 00:30:19,975 [ scc.config] DEBUG Found github.token
2025-03-08 00:30:19,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:20,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:20,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:20,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:20,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:21,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-03-08 00:30:21,014 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:03
2025-03-08 00:30:21,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:21,019 [ scc.git] DEBUG Check current status
2025-03-08 00:30:21,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:21,023 [ scc.git] DEBUG d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755
2025-03-08 00:30:21,023 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:21,065 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-08 00:30:21,069 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-08 00:30:21,073 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412)
2025-03-08 00:30:21,078 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-08 00:30:21,082 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830)
2025-03-08 00:30:21,086 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:21,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:21,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-03-08 00:30:21,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:22,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:22,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:22,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:22,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:22,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:23,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:23,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:23,305 [ scc.git] DEBUG Resetting...
2025-03-08 00:30:23,305 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-03-08 00:30:23,312 [ scc.git] DEBUG HEAD is now at d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755
2025-03-08 00:30:23,312 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-03-08 00:30:23,368 [ scc.git] DEBUG Check current status
2025-03-08 00:30:23,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:23,372 [ scc.git] DEBUG d392493 Merge pull request #305 from ome/dependabot/submodules/omero-scripts-4b4c755
2025-03-08 00:30:23,373 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:23,414 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-08 00:30:23,418 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-08 00:30:23,422 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412)
2025-03-08 00:30:23,427 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-08 00:30:23,431 [ scc.git] DEBUG 96d113830f31142cb272c5a486b048cd185c51bd omero-web (v5.28.0-5-g96d113830)
2025-03-08 00:30:23,432 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-03-08 00:30:23,432 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-03-08 00:30:23,432 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-03-08 00:30:23,432 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-03-08 00:30:23,432 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-03-08 00:30:23,433 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:30:23,557 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:23,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-03-08 00:30:24,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:24,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/309 HTTP/1.1" 200 None
2025-03-08 00:30:24,278 [ scc.repo] DEBUG # ... Include label: dependencies
2025-03-08 00:30:24,278 [ scc.repo] DEBUG - PR 309 dependabot[bot] 'Bump omero-web from `96d1138` to `81d9862`'
2025-03-08 00:30:24,278 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:30:24,278 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:24,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:24,282 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-08 00:30:24,286 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:30:24,286 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-08 00:30:24,290 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-08 00:30:24,294 [ scc.git] DEBUG Already up to date.
2025-03-08 00:30:24,295 [ scc.git] DEBUG Calling 'git fetch origin pull/309/head'
2025-03-08 00:30:24,591 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-03-08 00:30:24,591 [ scc.git] DEBUG * branch refs/pull/309/head -> FETCH_HEAD
2025-03-08 00:30:24,597 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:30:24,597 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:24,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:24,601 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8fce7918ed1e5d20964e9c82036f8a573ba7acd6'
2025-03-08 00:30:24,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:24,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 309 (Bump omero-web from `96d1138` to `81d9862`) 8fce7918ed1e5d20964e9c82036f8a573ba7acd6'
2025-03-08 00:30:24,619 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:30:24,622 [ scc.git] DEBUG omero-web | 2 +-
2025-03-08 00:30:24,622 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-08 00:30:24,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:24,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:24,790 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:30:24,860 [ scc.git] DEBUG Submodule path 'omero-web': checked out '81d9862be2703f8e65383f984684d49bc4f015e7'
2025-03-08 00:30:24,861 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:24,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:24,865 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:30:24,902 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f55ae258460> has no local changes
2025-03-08 00:30:24,902 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 309 dependabot[bot] 'Bump omero-web from `96d1138` to `81d9862`'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:30:24,934 [ scc.git] DEBUG [detached HEAD 54ed70a] merge master -Dorg -Snone
2025-03-08 00:30:24,934 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-03-08 00:30:24,934 [ scc.merge] INFO Already up to date.
2025-03-08 00:30:24,934 [ scc.merge] INFO
2025-03-08 00:30:24,934 [ scc.merge] INFO Merged PRs:
2025-03-08 00:30:24,934 [ scc.merge] INFO - PR 309 dependabot[bot] 'Bump omero-web from `96d1138` to `81d9862`'
2025-03-08 00:30:24,934 [ scc.merge] INFO
2025-03-08 00:30:24,934 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-03-08 00:30:24,935 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
From https://github.com/ome/omero-web
81d9862be..4b979f847 master -> origin/master
* [new tag] v5.29.0 -> v5.29.0
Submodule path 'omero-web': checked out '4b979f847a45a13ead11e7b39705ec1656376fbc'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-03-08 00:30:27,323 [ scc.config] DEBUG Found github.token
2025-03-08 00:30:27,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:27,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:27,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:27,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:28,171 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:28,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-03-08 00:30:28,328 [ scc.gh] DEBUG 4988 remaining from 5000 (Reset at 01:03
2025-03-08 00:30:28,329 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:28,333 [ scc.git] DEBUG Check current status
2025-03-08 00:30:28,333 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:28,337 [ scc.git] DEBUG 54ed70a merge master -Dorg -Snone
2025-03-08 00:30:28,337 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:28,380 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-08 00:30:28,383 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-08 00:30:28,388 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412)
2025-03-08 00:30:28,392 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-08 00:30:28,396 [ scc.git] DEBUG +4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847)
2025-03-08 00:30:28,401 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:28,401 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-03-08 00:30:28,403 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-03-08 00:30:28,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:28,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-03-08 00:30:29,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:29,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:29,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:29,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:29,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:30,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:30,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:30,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:30,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:30,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-03-08 00:30:30,665 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:30,669 [ scc.git] DEBUG Check current status
2025-03-08 00:30:30,669 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:30,673 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-03-08 00:30:30,673 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:30,717 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:30,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:31,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-03-08 00:30:31,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:31,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:31,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:32,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:32,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:32,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:32,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:33,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:33,044 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:33,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:33,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-03-08 00:30:33,087 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:33,091 [ scc.git] DEBUG Check current status
2025-03-08 00:30:33,091 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:33,095 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-03-08 00:30:33,095 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:33,139 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:33,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:33,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-03-08 00:30:33,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:34,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:34,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:34,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:34,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:34,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:35,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:35,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:35,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:35,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:35,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-03-08 00:30:35,398 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:35,402 [ scc.git] DEBUG Check current status
2025-03-08 00:30:35,402 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:35,406 [ scc.git] DEBUG 05d52412 Bump version: 5.19.6 → 5.19.7.dev0
2025-03-08 00:30:35,406 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:35,448 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:35,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:35,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-03-08 00:30:36,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:36,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:36,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:36,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:37,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:37,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:37,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:37,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:37,637 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:37,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:37,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-03-08 00:30:37,680 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:37,683 [ scc.git] DEBUG Check current status
2025-03-08 00:30:37,684 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:37,688 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0
2025-03-08 00:30:37,688 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:37,731 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:37,731 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-03-08 00:30:37,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:38,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-03-08 00:30:38,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:38,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:38,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:39,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:39,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:39,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:39,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:39,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:39,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:39,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:39,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-03-08 00:30:39,983 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-03-08 00:30:39,987 [ scc.git] DEBUG Check current status
2025-03-08 00:30:39,987 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:39,991 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0
2025-03-08 00:30:39,992 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:40,035 [ scc.config] DEBUG Found remote.origin.url
2025-03-08 00:30:40,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:40,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-03-08 00:30:40,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:40,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-03-08 00:30:41,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:41,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-03-08 00:30:41,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:41,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-03-08 00:30:42,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:42,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-03-08 00:30:42,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:42,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:42,255 [ scc.git] DEBUG Resetting...
2025-03-08 00:30:42,255 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-03-08 00:30:42,261 [ scc.git] DEBUG HEAD is now at 54ed70a merge master -Dorg -Snone
2025-03-08 00:30:42,261 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-03-08 00:30:42,332 [ scc.git] DEBUG Submodule path 'omero-web': checked out '81d9862be2703f8e65383f984684d49bc4f015e7'
2025-03-08 00:30:42,335 [ scc.git] DEBUG Check current status
2025-03-08 00:30:42,335 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-03-08 00:30:42,339 [ scc.git] DEBUG 54ed70a merge master -Dorg -Snone
2025-03-08 00:30:42,340 [ scc.git] DEBUG Calling 'git submodule status'
2025-03-08 00:30:42,381 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-03-08 00:30:42,385 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-03-08 00:30:42,389 [ scc.git] DEBUG 05d52412ff7d6c4e3a515717d2807b1a21bf4291 omero-py (v5.19.6-1-g05d52412)
2025-03-08 00:30:42,393 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 omero-scripts (v5.9.0-1-g4b4c755)
2025-03-08 00:30:42,398 [ scc.git] DEBUG 81d9862be2703f8e65383f984684d49bc4f015e7 omero-web (v5.28.0-45-g81d9862be)
2025-03-08 00:30:42,399 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-03-08 00:30:42,399 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-03-08 00:30:42,399 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-03-08 00:30:42,399 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-03-08 00:30:42,399 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-03-08 00:30:42,399 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-03-08 00:30:42,399 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:30:42,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:42,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-03-08 00:30:42,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:43,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/309 HTTP/1.1" 200 None
2025-03-08 00:30:43,207 [ scc.repo] DEBUG # ... Include label: dependencies
2025-03-08 00:30:43,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:43,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/8fce7918ed1e5d20964e9c82036f8a573ba7acd6 HTTP/1.1" 200 None
2025-03-08 00:30:44,051 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:44,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/8fce7918ed1e5d20964e9c82036f8a573ba7acd6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:30:44,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:44,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/8fce7918ed1e5d20964e9c82036f8a573ba7acd6 HTTP/1.1" 200 None
2025-03-08 00:30:45,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:45,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/8fce7918ed1e5d20964e9c82036f8a573ba7acd6?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:30:45,332 [ scc.repo] DEBUG - PR 309 dependabot[bot] 'Bump omero-web from `96d1138` to `81d9862`'
2025-03-08 00:30:45,332 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:30:45,332 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:45,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:45,337 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-08 00:30:45,341 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:30:45,341 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-08 00:30:45,345 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-08 00:30:45,350 [ scc.git] DEBUG Already up to date.
2025-03-08 00:30:45,350 [ scc.git] DEBUG Calling 'git fetch origin pull/309/head'
2025-03-08 00:30:45,660 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-03-08 00:30:45,660 [ scc.git] DEBUG * branch refs/pull/309/head -> FETCH_HEAD
2025-03-08 00:30:45,667 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:30:45,667 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:45,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:45,671 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8fce7918ed1e5d20964e9c82036f8a573ba7acd6'
2025-03-08 00:30:45,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:45,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 309 (Bump omero-web from `96d1138` to `81d9862`) 8fce7918ed1e5d20964e9c82036f8a573ba7acd6'
2025-03-08 00:30:45,684 [ scc.git] DEBUG Already up to date.
2025-03-08 00:30:45,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:45,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:45,848 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:30:45,892 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:45,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:45,896 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:30:46,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:46,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-03-08 00:30:46,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:46,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-03-08 00:30:47,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:47,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-03-08 00:30:47,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:47,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-03-08 00:30:48,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:48,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:30:48,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:48,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-03-08 00:30:49,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:49,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:30:49,388 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-03-08 00:30:49,388 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:30:49,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-03-08 00:30:49,389 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:49,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:49,394 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-08 00:30:49,398 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:30:49,398 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-08 00:30:49,403 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-08 00:30:49,408 [ scc.git] DEBUG Already up to date.
2025-03-08 00:30:49,408 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-03-08 00:30:49,727 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-03-08 00:30:49,728 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-03-08 00:30:49,732 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:30:49,733 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:49,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:49,737 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-03-08 00:30:49,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:49,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-03-08 00:30:49,761 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-03-08 00:30:49,762 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-03-08 00:30:49,766 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-03-08 00:30:49,767 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-03-08 00:30:49,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:49,769 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-03-08 00:30:49,769 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-03-08 00:30:49,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:49,936 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:30:49,980 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:49,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:49,985 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:50,024 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:30:50,030 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd71cc8b460> has no local changes
2025-03-08 00:30:50,030 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:30:50,038 [ scc.git] DEBUG [detached HEAD f5e3918] merge master -Dorg -Ssuccess-only
2025-03-08 00:30:50,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:50,038 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:30:50,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:50,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-03-08 00:30:50,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:50,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-03-08 00:30:51,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:51,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-03-08 00:30:51,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:51,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-03-08 00:30:52,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:52,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-03-08 00:30:52,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:52,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:30:53,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:53,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-03-08 00:30:53,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:53,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:30:53,913 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-03-08 00:30:54,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:54,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-03-08 00:30:54,661 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:54,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-03-08 00:30:55,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:55,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-03-08 00:30:55,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:55,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-03-08 00:30:55,849 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:30:55,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-03-08 00:30:55,849 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:55,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:55,854 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-08 00:30:55,858 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:30:55,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-08 00:30:55,863 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-08 00:30:55,868 [ scc.git] DEBUG Already up to date.
2025-03-08 00:30:55,869 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-03-08 00:30:56,184 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-03-08 00:30:56,184 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-03-08 00:30:56,189 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:30:56,189 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:56,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:56,194 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-03-08 00:30:56,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:56,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-03-08 00:30:56,216 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-03-08 00:30:56,217 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:30:56,220 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-03-08 00:30:56,220 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-03-08 00:30:56,220 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-03-08 00:30:56,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:56,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:30:56,379 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:30:56,421 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:30:56,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:30:56,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:30:56,465 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:30:56,471 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd71cc06b80> has no local changes
2025-03-08 00:30:56,471 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:30:56,480 [ scc.git] DEBUG [detached HEAD 62a0129] merge master -Dorg -Ssuccess-only
2025-03-08 00:30:56,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:30:56,480 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:30:56,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:57,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2025-03-08 00:30:57,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:57,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/449 HTTP/1.1" 200 None
2025-03-08 00:30:57,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:58,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/449/comments HTTP/1.1" 200 None
2025-03-08 00:30:58,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:58,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88 HTTP/1.1" 200 None
2025-03-08 00:30:58,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:59,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:30:59,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:30:59,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:30:59,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:00,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88 HTTP/1.1" 200 None
2025-03-08 00:31:00,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:00,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/e6c72898bd37920897ce8f06f3b28445d9d4ea88?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:00,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:01,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88 HTTP/1.1" 200 None
2025-03-08 00:31:01,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:01,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/e6c72898bd37920897ce8f06f3b28445d9d4ea88/status HTTP/1.1" 200 None
2025-03-08 00:31:01,568 [ scc.repo] DEBUG - PR 449 will-moore 'getQueryString includes externalInfo'
2025-03-08 00:31:01,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:02,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/447 HTTP/1.1" 200 None
2025-03-08 00:31:02,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:02,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/447/comments HTTP/1.1" 200 None
2025-03-08 00:31:02,502 [ scc.repo] DEBUG # ... Include label: include
2025-03-08 00:31:02,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:05,992 [ scc.repo] DEBUG - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
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2025-03-08 00:31:09,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:09,578 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:10,224 [ scc.repo] DEBUG - PR 445 sbesson 'Remove numpy<2 capping'
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2025-03-08 00:31:13,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:13,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:13,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:14,213 [ scc.repo] DEBUG - PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver'
2025-03-08 00:31:14,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:15,189 [ scc.repo] DEBUG # ... Exclude label: exclude
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2025-03-08 00:31:16,165 [ scc.repo] DEBUG # ... Include label: include
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2025-03-08 00:31:17,461 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:17,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:18,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:18,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:19,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2025-03-08 00:31:19,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:19,586 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
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2025-03-08 00:31:21,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:21,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:22,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:22,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:23,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:23,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:24,026 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
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2025-03-08 00:31:25,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:26,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:26,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:28,202 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:28,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:29,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:29,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:30,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:30,406 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-03-08 00:31:30,657 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:30,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2025-03-08 00:31:30,883 [ scc.repo] DEBUG # ... Exclude label: exclude
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2025-03-08 00:31:32,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:32,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2025-03-08 00:31:32,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:33,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:33,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:33,770 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2025-03-08 00:31:34,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-03-08 00:31:34,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-03-08 00:31:34,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:35,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-03-08 00:31:35,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:35,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:36,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:36,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:31:36,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:37,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-03-08 00:31:37,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:37,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:37,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:37,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-03-08 00:31:38,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:38,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2025-03-08 00:31:38,370 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-03-08 00:31:38,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:38,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2025-03-08 00:31:39,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:39,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2025-03-08 00:31:39,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:39,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-03-08 00:31:40,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:40,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-03-08 00:31:40,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:40,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2025-03-08 00:31:41,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:41,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:41,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:41,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2025-03-08 00:31:42,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:42,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:31:42,333 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2025-03-08 00:31:42,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:42,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2025-03-08 00:31:43,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:43,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2025-03-08 00:31:43,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:43,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:44,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:44,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2025-03-08 00:31:44,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:44,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:31:44,784 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2025-03-08 00:31:45,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:45,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2025-03-08 00:31:45,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:45,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2025-03-08 00:31:46,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:46,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2025-03-08 00:31:46,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:46,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:47,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:47,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2025-03-08 00:31:47,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:47,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:31:47,771 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2025-03-08 00:31:48,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:48,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-03-08 00:31:48,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:48,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-03-08 00:31:49,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:49,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-03-08 00:31:49,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:49,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:31:50,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:50,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-03-08 00:31:50,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:50,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:31:50,670 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-03-08 00:31:50,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:51,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2025-03-08 00:31:51,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:51,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2025-03-08 00:31:51,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:52,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2025-03-08 00:31:52,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:52,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2025-03-08 00:31:52,676 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:31:52,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-03-08 00:31:52,677 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:31:52,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:52,682 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-08 00:31:52,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:31:52,687 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-08 00:31:52,691 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-08 00:31:52,696 [ scc.git] DEBUG Already up to date.
2025-03-08 00:31:52,696 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-03-08 00:31:53,008 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:53,009 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-03-08 00:31:53,014 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2025-03-08 00:31:53,344 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:53,344 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2025-03-08 00:31:53,349 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2025-03-08 00:31:53,641 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:53,641 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2025-03-08 00:31:53,646 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2025-03-08 00:31:53,934 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:53,934 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2025-03-08 00:31:53,938 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-03-08 00:31:54,223 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:54,223 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-03-08 00:31:54,228 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2025-03-08 00:31:54,514 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:54,514 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2025-03-08 00:31:54,519 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-03-08 00:31:54,809 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:54,809 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-03-08 00:31:54,814 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-03-08 00:31:55,097 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:55,097 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-03-08 00:31:55,102 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2025-03-08 00:31:55,553 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:55,553 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2025-03-08 00:31:55,559 [ scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2025-03-08 00:31:55,844 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:55,844 [ scc.git] DEBUG * branch refs/pull/444/head -> FETCH_HEAD
2025-03-08 00:31:55,848 [ scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2025-03-08 00:31:56,143 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:56,144 [ scc.git] DEBUG * branch refs/pull/445/head -> FETCH_HEAD
2025-03-08 00:31:56,149 [ scc.git] DEBUG Calling 'git fetch origin pull/447/head'
2025-03-08 00:31:56,649 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:56,650 [ scc.git] DEBUG * branch refs/pull/447/head -> FETCH_HEAD
2025-03-08 00:31:56,654 [ scc.git] DEBUG Calling 'git fetch origin pull/449/head'
2025-03-08 00:31:57,170 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-03-08 00:31:57,171 [ scc.git] DEBUG * branch refs/pull/449/head -> FETCH_HEAD
2025-03-08 00:31:57,173 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:31:57,173 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:31:57,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:57,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-03-08 00:31:57,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:57,196 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-03-08 00:31:57,219 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-03-08 00:31:57,219 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-03-08 00:31:57,221 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:57,226 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-03-08 00:31:57,226 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-03-08 00:31:57,226 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-03-08 00:31:57,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:57,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:31:57,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2025-03-08 00:31:57,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:57,492 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2025-03-08 00:31:57,527 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-08 00:31:57,527 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2025-03-08 00:31:57,528 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:57,535 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2025-03-08 00:31:57,535 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2025-03-08 00:31:57,535 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2025-03-08 00:31:57,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:57,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:31:57,884 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2025-03-08 00:31:57,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:57,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2025-03-08 00:31:57,924 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2025-03-08 00:31:57,925 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:57,928 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2025-03-08 00:31:57,928 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2025-03-08 00:31:58,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:58,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:31:58,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2025-03-08 00:31:58,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:58,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2025-03-08 00:31:58,362 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2025-03-08 00:31:58,363 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2025-03-08 00:31:58,364 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:58,367 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2025-03-08 00:31:58,367 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2025-03-08 00:31:58,367 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2025-03-08 00:31:58,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:58,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:31:58,738 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-03-08 00:31:58,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:58,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-03-08 00:31:58,776 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:58,779 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-03-08 00:31:58,779 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-03-08 00:31:58,779 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-03-08 00:31:58,779 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-03-08 00:31:58,779 [ scc.git] DEBUG create mode 100644 connect.py
2025-03-08 00:31:58,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:59,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:31:59,200 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2025-03-08 00:31:59,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:59,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2025-03-08 00:31:59,238 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2025-03-08 00:31:59,240 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:59,243 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2025-03-08 00:31:59,243 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2025-03-08 00:31:59,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:31:59,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:31:59,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-03-08 00:31:59,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:31:59,634 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-03-08 00:31:59,657 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-03-08 00:31:59,659 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:31:59,663 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-03-08 00:31:59,663 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-03-08 00:31:59,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:00,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:00,031 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-03-08 00:32:00,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:00,048 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-03-08 00:32:00,081 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-08 00:32:00,082 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:00,089 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-03-08 00:32:00,089 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-03-08 00:32:00,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:00,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:00,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2025-03-08 00:32:00,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:00,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2025-03-08 00:32:00,485 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:00,489 [ scc.git] DEBUG .gitignore | 1 +
2025-03-08 00:32:00,489 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2025-03-08 00:32:00,489 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2025-03-08 00:32:00,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:00,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:00,848 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4dbfb0b8633085571fc5317ee6189bbe39e3c8d4'
2025-03-08 00:32:00,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:00,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (omero.util.populate_metadata: only log column types from HeaderResolver) 4dbfb0b8633085571fc5317ee6189bbe39e3c8d4'
2025-03-08 00:32:00,891 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:00,895 [ scc.git] DEBUG .github/workflows/codeql.yml | 48 +++++++++++++++++++++++++++++++++++++
2025-03-08 00:32:00,895 [ scc.git] DEBUG src/omero/util/populate_metadata.py | 2 +-
2025-03-08 00:32:00,895 [ scc.git] DEBUG 2 files changed, 49 insertions(+), 1 deletion(-)
2025-03-08 00:32:00,895 [ scc.git] DEBUG create mode 100644 .github/workflows/codeql.yml
2025-03-08 00:32:01,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:01,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:01,254 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1b8c6f6bef2c3eb802692d41cb4f716af5644d10'
2025-03-08 00:32:01,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:01,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 445 (Remove numpy<2 capping) 1b8c6f6bef2c3eb802692d41cb4f716af5644d10'
2025-03-08 00:32:01,294 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:01,297 [ scc.git] DEBUG setup.py | 3 ++-
2025-03-08 00:32:01,297 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-)
2025-03-08 00:32:01,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:01,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:01,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...84690ac11bf275bdc07d80dd74ff3fc8fc2577b1'
2025-03-08 00:32:01,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:01,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 447 (Change ignoreExeptions default to empty tuple) 84690ac11bf275bdc07d80dd74ff3fc8fc2577b1'
2025-03-08 00:32:01,726 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-08 00:32:01,728 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:01,735 [ scc.git] DEBUG src/omero/gateway/__init__.py | 2 +-
2025-03-08 00:32:01,735 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-08 00:32:01,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:02,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:02,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e6c72898bd37920897ce8f06f3b28445d9d4ea88'
2025-03-08 00:32:02,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:02,116 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 449 (getQueryString includes externalInfo) e6c72898bd37920897ce8f06f3b28445d9d4ea88'
2025-03-08 00:32:02,158 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-03-08 00:32:02,159 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:02,166 [ scc.git] DEBUG src/omero/gateway/__init__.py | 1 +
2025-03-08 00:32:02,166 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-03-08 00:32:02,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:02,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:02,521 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:32:02,563 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:32:02,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:02,568 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:32:02,607 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:32:02,616 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd71cc0bfd0> has no local changes
2025-03-08 00:32:02,616 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver'
- PR 445 sbesson 'Remove numpy<2 capping'
- PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
- PR 449 will-moore 'getQueryString includes externalInfo'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:32:02,627 [ scc.git] DEBUG [detached HEAD cf061061] merge master -Dorg -Ssuccess-only
2025-03-08 00:32:02,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:32:02,627 [ scc.git] INFO Overriding base-branch from master to develop
2025-03-08 00:32:02,627 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:32:02,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:03,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-03-08 00:32:03,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:03,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-03-08 00:32:03,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:04,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-03-08 00:32:04,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:04,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-03-08 00:32:04,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:05,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:05,406 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:05,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:05,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:06,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-03-08 00:32:06,398 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:06,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:32:06,565 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-03-08 00:32:06,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:07,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-03-08 00:32:07,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:07,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-03-08 00:32:07,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:08,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-03-08 00:32:08,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:08,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:08,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:09,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-03-08 00:32:09,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:09,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-03-08 00:32:09,455 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-03-08 00:32:09,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:09,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-03-08 00:32:10,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:10,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-03-08 00:32:10,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:10,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-03-08 00:32:11,217 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:11,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-03-08 00:32:11,528 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:32:11,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-03-08 00:32:11,528 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:32:11,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:11,533 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-03-08 00:32:11,537 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:32:11,537 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-03-08 00:32:11,541 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-03-08 00:32:11,546 [ scc.git] DEBUG Already up to date.
2025-03-08 00:32:11,546 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-03-08 00:32:11,868 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-03-08 00:32:11,868 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-03-08 00:32:11,872 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-03-08 00:32:12,158 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-03-08 00:32:12,158 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-03-08 00:32:12,163 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:32:12,163 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:32:12,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:12,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-03-08 00:32:12,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:12,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-03-08 00:32:12,190 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-03-08 00:32:12,191 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-03-08 00:32:12,191 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-03-08 00:32:12,195 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-03-08 00:32:12,200 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0
2025-03-08 00:32:12,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:12,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:12,363 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-03-08 00:32:12,370 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867'
2025-03-08 00:32:12,375 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#341](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-03-08 00:32:12,379 [ scc.config] DEBUG Found github.token
2025-03-08 00:32:12,379 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-03-08 00:32:12,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-03-08 00:32:12,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:12,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-03-08 00:32:12,400 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:12,403 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-03-08 00:32:12,403 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-03-08 00:32:12,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:12,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:12,796 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:32:12,838 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:32:12,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:12,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:32:12,883 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:32:12,889 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd71cc0bbb0> has no local changes
2025-03-08 00:32:12,889 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:32:12,897 [ scc.git] DEBUG [detached HEAD 2b4be39] merge master -Dorg -Ssuccess-only
2025-03-08 00:32:12,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:32:12,898 [ scc.repo] DEBUG ## PRs found:
2025-03-08 00:32:13,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:13,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-03-08 00:32:13,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None
2025-03-08 00:32:14,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:14,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None
2025-03-08 00:32:14,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:14,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-03-08 00:32:15,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:15,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:15,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:15,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:16,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:16,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-03-08 00:32:16,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:17,104 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:17,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None
2025-03-08 00:32:17,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:17,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None
2025-03-08 00:32:17,742 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates'
2025-03-08 00:32:17,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:18,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-03-08 00:32:18,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:18,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-03-08 00:32:19,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:19,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-03-08 00:32:19,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:19,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-03-08 00:32:20,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:20,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:20,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:20,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:21,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:21,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-03-08 00:32:21,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:21,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:22,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:22,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-03-08 00:32:22,574 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:22,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-03-08 00:32:22,774 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-03-08 00:32:23,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:23,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None
2025-03-08 00:32:23,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:23,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None
2025-03-08 00:32:24,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:24,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:24,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:25,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:25,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None
2025-03-08 00:32:25,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:25,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:26,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:26,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None
2025-03-08 00:32:26,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:26,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None
2025-03-08 00:32:26,680 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count'
2025-03-08 00:32:26,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:27,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-03-08 00:32:27,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:27,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-03-08 00:32:27,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:28,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:28,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:28,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:28,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:29,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-03-08 00:32:29,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:29,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:30,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:30,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-03-08 00:32:30,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:30,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-03-08 00:32:30,731 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-03-08 00:32:30,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:31,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-03-08 00:32:31,225 [ scc.repo] DEBUG # ... Include label: include
2025-03-08 00:32:31,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:31,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-03-08 00:32:31,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:32,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:32,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:32,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:32,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:33,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-03-08 00:32:33,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:33,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:33,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:34,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-03-08 00:32:34,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:34,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-03-08 00:32:34,620 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-03-08 00:32:34,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:35,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-03-08 00:32:35,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:35,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-03-08 00:32:35,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:36,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-03-08 00:32:36,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:36,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:36,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:37,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:37,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:37,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-03-08 00:32:37,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:38,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:38,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:38,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-03-08 00:32:38,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:38,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-03-08 00:32:38,970 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-03-08 00:32:39,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:39,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-03-08 00:32:39,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:39,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-03-08 00:32:40,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:40,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-03-08 00:32:40,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:40,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:41,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:41,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:41,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:41,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-03-08 00:32:42,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:42,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:42,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:42,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-03-08 00:32:43,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:43,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-03-08 00:32:43,322 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-03-08 00:32:43,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:43,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-03-08 00:32:44,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:44,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-03-08 00:32:44,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:44,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-03-08 00:32:45,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:45,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-03-08 00:32:45,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:45,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-03-08 00:32:46,086 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:46,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:46,578 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:46,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:47,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:47,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-03-08 00:32:47,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:47,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:48,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:48,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-03-08 00:32:48,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2025-03-08 00:32:48,850 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-03-08 00:32:49,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:49,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-03-08 00:32:49,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:49,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-03-08 00:32:50,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:50,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-03-08 00:32:50,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:50,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:51,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:51,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:51,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:51,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-03-08 00:32:52,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:52,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:52,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:52,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-03-08 00:32:53,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:53,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2025-03-08 00:32:53,231 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-03-08 00:32:53,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:53,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-03-08 00:32:53,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:54,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-03-08 00:32:54,495 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:54,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-03-08 00:32:55,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:55,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-03-08 00:32:55,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:55,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-03-08 00:32:55,786 [ scc.repo] DEBUG ## Branches found:
2025-03-08 00:32:55,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-03-08 00:32:55,787 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:32:55,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:55,792 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-03-08 00:32:55,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-03-08 00:32:55,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-03-08 00:32:55,802 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-03-08 00:32:55,815 [ scc.git] DEBUG Updating 81d9862be..4b979f847
2025-03-08 00:32:55,816 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-03-08 00:32:56,145 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:56,145 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-03-08 00:32:56,150 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-03-08 00:32:56,450 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:56,450 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-03-08 00:32:56,455 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-03-08 00:32:56,779 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:56,779 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-03-08 00:32:56,785 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-03-08 00:32:57,073 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:57,074 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-03-08 00:32:57,078 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-03-08 00:32:57,362 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:57,362 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-03-08 00:32:57,367 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-03-08 00:32:57,655 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:57,655 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-03-08 00:32:57,660 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head'
2025-03-08 00:32:57,955 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:57,955 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD
2025-03-08 00:32:57,960 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-03-08 00:32:58,277 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:58,278 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-03-08 00:32:58,282 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head'
2025-03-08 00:32:58,565 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-03-08 00:32:58,566 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD
2025-03-08 00:32:58,570 [ scc.git] DEBUG ## Unique users: []
2025-03-08 00:32:58,570 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:32:58,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:58,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-03-08 00:32:58,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:58,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-03-08 00:32:58,611 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-03-08 00:32:58,611 [ scc.git] DEBUG Auto-merging setup.py
2025-03-08 00:32:58,613 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:58,616 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-03-08 00:32:58,616 [ scc.git] DEBUG setup.py | 1 +
2025-03-08 00:32:58,616 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-03-08 00:32:58,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:58,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:58,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-03-08 00:32:58,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:58,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-03-08 00:32:58,818 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-03-08 00:32:58,819 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-03-08 00:32:58,820 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:58,824 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-03-08 00:32:58,824 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-03-08 00:32:58,824 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-03-08 00:32:59,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:59,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:59,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-03-08 00:32:59,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:59,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-03-08 00:32:59,227 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:59,231 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-03-08 00:32:59,231 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-03-08 00:32:59,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:32:59,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:32:59,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-03-08 00:32:59,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:32:59,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-03-08 00:32:59,635 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:32:59,640 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-03-08 00:32:59,640 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-03-08 00:32:59,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:00,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:00,019 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-03-08 00:33:00,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:33:00,034 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-03-08 00:33:00,061 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:33:00,067 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-03-08 00:33:00,067 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-03-08 00:33:00,068 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-03-08 00:33:00,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:00,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:00,446 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-03-08 00:33:00,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:33:00,461 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-03-08 00:33:00,490 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-03-08 00:33:00,492 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:33:00,498 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-03-08 00:33:00,498 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-03-08 00:33:00,498 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-03-08 00:33:00,498 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-03-08 00:33:00,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:00,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:00,893 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022'
2025-03-08 00:33:00,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:33:00,908 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022'
2025-03-08 00:33:00,934 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:33:00,938 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++--
2025-03-08 00:33:00,938 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-)
2025-03-08 00:33:01,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:01,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:01,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-03-08 00:33:01,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:33:01,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-03-08 00:33:01,348 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:33:01,352 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-03-08 00:33:01,352 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-03-08 00:33:01,352 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-03-08 00:33:01,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:01,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:01,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-03-08 00:33:01,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:33:01,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3'
2025-03-08 00:33:01,754 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-03-08 00:33:01,758 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++----------------------------
2025-03-08 00:33:01,758 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-)
2025-03-08 00:33:01,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:02,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:02,136 [ scc.git] DEBUG Calling 'git submodule update'
2025-03-08 00:33:02,179 [ scc.git] DEBUG Get sha1 of %s
2025-03-08 00:33:02,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-03-08 00:33:02,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:33:02,223 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:33:02,233 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd71cc06790> has no local changes
2025-03-08 00:33:02,234 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 613 will-moore 'Add /webclient/extinfo/image/ID/ for extInfo as JSON' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Updating 81d9862be..4b979f847
Previously merged:
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 606 knabar 'Fix issues related to images with very high channel count'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 614 sbesson 'CodeQL workflow updates'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:33:02,245 [ scc.git] DEBUG [detached HEAD c4dc3bc4f] merge master -Dorg -Ssuccess-only
2025-03-08 00:33:02,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:33:02,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-03-08 00:33:02,299 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-03-08 00:33:02,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:02,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:02,595 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-03-08 00:33:02,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:03,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:03,019 [ scc.config] DEBUG Found submodule.omero-py.url
2025-03-08 00:33:03,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:03,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:03,437 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-03-08 00:33:03,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:03,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:03,850 [ scc.config] DEBUG Found submodule.omero-web.url
2025-03-08 00:33:04,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-03-08 00:33:04,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-03-08 00:33:04,252 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-03-08 00:33:04,284 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd71cf67ca0> has local changes
2025-03-08 00:33:04,285 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 309 dependabot[bot] 'Bump omero-web from `96d1138` to `81d9862`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver'
- PR 445 sbesson 'Remove numpy<2 capping'
- PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
- PR 449 will-moore 'getQueryString includes externalInfo'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 613 will-moore 'Add /webclient/extinfo/image/ID/ for extInfo as JSON' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Updating 81d9862be..4b979f847
Previously merged:
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 606 knabar 'Fix issues related to images with very high channel count'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 614 sbesson 'CodeQL workflow updates'
Generated by OMERO-python-superbuild-push#341 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/341/)'
2025-03-08 00:33:04,295 [ scc.git] DEBUG [detached HEAD 4a10cb0] merge master -Dorg -Ssuccess-only
2025-03-08 00:33:04,295 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-03-08 00:33:04,295 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-03-08 00:33:04,296 [ scc.merge] INFO Already up to date.
2025-03-08 00:33:04,296 [ scc.merge] INFO
2025-03-08 00:33:04,296 [ scc.merge] INFO Merged PRs:
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 309 dependabot[bot] 'Bump omero-web from `96d1138` to `81d9862`'
2025-03-08 00:33:04,296 [ scc.merge] INFO
2025-03-08 00:33:04,296 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-03-08 00:33:04,296 [ scc.merge] INFO Already up to date.
2025-03-08 00:33:04,296 [ scc.merge] INFO
2025-03-08 00:33:04,296 [ scc.merge] INFO Merged PRs:
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-03-08 00:33:04,296 [ scc.merge] INFO
2025-03-08 00:33:04,296 [ scc.merge] INFO Repository: ome/omero-marshal
2025-03-08 00:33:04,296 [ scc.merge] INFO Excluded PRs:
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-03-08 00:33:04,296 [ scc.merge] INFO Already up to date.
2025-03-08 00:33:04,296 [ scc.merge] INFO
2025-03-08 00:33:04,296 [ scc.merge] INFO Merged PRs:
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-03-08 00:33:04,296 [ scc.merge] INFO
2025-03-08 00:33:04,296 [ scc.merge] INFO Repository: ome/omero-py
2025-03-08 00:33:04,296 [ scc.merge] INFO Excluded PRs:
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2025-03-08 00:33:04,296 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2025-03-08 00:33:04,297 [ scc.merge] INFO Already up to date.
2025-03-08 00:33:04,297 [ scc.merge] INFO
2025-03-08 00:33:04,297 [ scc.merge] INFO Merged PRs:
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 444 sbesson 'omero.util.populate_metadata: only log column types from HeaderResolver'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 445 sbesson 'Remove numpy<2 capping'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 447 jmuhlich 'Change ignoreExeptions default to empty tuple'
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 449 will-moore 'getQueryString includes externalInfo'
2025-03-08 00:33:04,297 [ scc.merge] INFO
2025-03-08 00:33:04,297 [ scc.merge] INFO Repository: ome/omero-scripts
2025-03-08 00:33:04,297 [ scc.merge] INFO Excluded PRs:
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-03-08 00:33:04,297 [ scc.merge] INFO Already up to date.
2025-03-08 00:33:04,297 [ scc.merge] INFO
2025-03-08 00:33:04,297 [ scc.merge] INFO Merged PRs:
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-03-08 00:33:04,297 [ scc.merge] INFO
2025-03-08 00:33:04,297 [ scc.merge] INFO Conflicting PRs (not included):
2025-03-08 00:33:04,297 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-03-08 00:33:04,297 [ scc.merge] INFO
2025-03-08 00:33:04,297 [ scc.merge] INFO Repository: ome/omero-web
2025-03-08 00:33:04,297 [ scc.merge] INFO Excluded PRs:
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 613 will-moore 'Add /webclient/extinfo/image/ID/ for extInfo as JSON' (stage: draft)
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2025-03-08 00:33:04,298 [ scc.merge] INFO Updating 81d9862be..4b979f847
2025-03-08 00:33:04,298 [ scc.merge] INFO Previously merged:
2025-03-08 00:33:04,298 [ scc.merge] INFO
2025-03-08 00:33:04,298 [ scc.merge] INFO Merged PRs:
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-03-08 00:33:04,298 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates'
2025-03-08 00:33:04,298 [ scc.merge] INFO
2025-03-08 00:33:04,298 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-03-08 00:33:04,298 [ scc.git] DEBUG Calling 'git remote'
2025-03-08 00:33:04,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-03-08 00:33:04,302 [ scc.git] DEBUG Calling 'git remote'
2025-03-08 00:33:04,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:33:04,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-03-08 00:33:04,306 [ scc.git] DEBUG Calling 'git remote'
2025-03-08 00:33:04,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:33:04,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-03-08 00:33:04,310 [ scc.git] DEBUG Calling 'git remote'
2025-03-08 00:33:04,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:33:04,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-03-08 00:33:04,314 [ scc.git] DEBUG Calling 'git remote'
2025-03-08 00:33:04,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-03-08 00:33:04,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-03-08 00:33:04,318 [ scc.git] DEBUG Calling 'git remote'
2025-03-08 00:33:04,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 05d52412
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 81d9862be
nothing to commit, working tree clean
HEAD detached from d392493
nothing to commit, working tree clean
2025-03-08 00:33:32,557 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS