Started by upstream project "Trigger" build number 442 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 1ac5a0cfa9f16361af1cce69d268027821a07127 (refs/remotes/origin/master) Commit message: "Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 1ac5a0cfa9f16361af1cce69d268027821a07127 # timeout=10 > git rev-list --no-walk 1ac5a0cfa9f16361af1cce69d268027821a07127 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 399 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.0.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached certifi-2025.1.31-py3-none-any.whl (166 kB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-04-16 00:50:43,510 [ scc.config] DEBUG Found github.token 2025-04-16 00:50:43,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:43,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:50:43,944 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:44,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:50:44,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:44,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-16 00:50:44,514 [ scc.gh] DEBUG 4389 remaining from 5000 (Reset at 01:04 2025-04-16 00:50:44,515 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:50:44,517 [ scc.git] DEBUG Check current status 2025-04-16 00:50:44,517 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:50:44,520 [ scc.git] DEBUG 1ac5a0c Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276 2025-04-16 00:50:44,520 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:50:44,821 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-16 00:50:44,955 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-16 00:50:46,549 [ scc.git] DEBUG 2037276b082ea7d828caa0e66ada754de2a6c62f omero-py (v5.19.8-15-g2037276b) 2025-04-16 00:50:46,555 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-16 00:50:46,559 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-16 00:50:46,562 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:50:46,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:46,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-16 00:50:47,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:47,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:50:47,622 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:47,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:50:48,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:48,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:50:48,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:48,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:50:48,694 [ scc.git] DEBUG Resetting... 2025-04-16 00:50:48,695 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-16 00:50:48,699 [ scc.git] DEBUG HEAD is now at 1ac5a0c Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276 2025-04-16 00:50:48,700 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-16 00:50:48,754 [ scc.git] DEBUG Check current status 2025-04-16 00:50:48,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:50:48,756 [ scc.git] DEBUG 1ac5a0c Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276 2025-04-16 00:50:48,757 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:50:48,796 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-16 00:50:48,799 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-16 00:50:48,809 [ scc.git] DEBUG 2037276b082ea7d828caa0e66ada754de2a6c62f omero-py (v5.19.8-15-g2037276b) 2025-04-16 00:50:48,814 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-16 00:50:48,818 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-16 00:50:48,818 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-16 00:50:48,818 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-16 00:50:48,818 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-16 00:50:48,818 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-16 00:50:48,818 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-16 00:50:48,819 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:50:48,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:49,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-04-16 00:50:49,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:49,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/319 HTTP/1.1" 200 None 2025-04-16 00:50:49,698 [ scc.repo] DEBUG # ... Include label: dependencies 2025-04-16 00:50:49,698 [ scc.repo] DEBUG - PR 319 dependabot[bot] 'Bump omero-py from `2037276` to `e485be4`' 2025-04-16 00:50:49,698 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:50:49,698 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:50:49,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:50:49,700 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-16 00:50:49,702 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:50:49,702 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-16 00:50:49,705 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-16 00:50:49,707 [ scc.git] DEBUG Already up to date. 2025-04-16 00:50:49,707 [ scc.git] DEBUG Calling 'git fetch origin pull/319/head' 2025-04-16 00:50:49,984 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-04-16 00:50:49,984 [ scc.git] DEBUG * branch refs/pull/319/head -> FETCH_HEAD 2025-04-16 00:50:49,989 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:50:49,989 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:50:49,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:50:49,992 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e193e989c0a7d407adb6c124c739d5abac9a403' 2025-04-16 00:50:50,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:50:50,002 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 319 (Bump omero-py from `2037276` to `e485be4`) 8e193e989c0a7d407adb6c124c739d5abac9a403' 2025-04-16 00:50:50,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:50:50,013 [ scc.git] DEBUG omero-py | 2 +- 2025-04-16 00:50:50,014 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-16 00:50:50,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:50,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:50:50,191 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:50:50,316 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'e485be49bf7cba61f34dd030161831d8d8b66285' 2025-04-16 00:50:50,317 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:50:50,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:50:50,319 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:50:50,476 [ scc.git] DEBUG has no local changes 2025-04-16 00:50:50,476 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 319 dependabot[bot] 'Bump omero-py from `2037276` to `e485be4`' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:50:50,769 [ scc.git] DEBUG [detached HEAD 294674f] merge master -Dorg -Snone 2025-04-16 00:50:50,769 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-16 00:50:50,769 [ scc.merge] INFO Already up to date. 2025-04-16 00:50:50,769 [ scc.merge] INFO 2025-04-16 00:50:50,769 [ scc.merge] INFO Merged PRs: 2025-04-16 00:50:50,769 [ scc.merge] INFO - PR 319 dependabot[bot] 'Bump omero-py from `2037276` to `e485be4`' 2025-04-16 00:50:50,769 [ scc.merge] INFO 2025-04-16 00:50:50,769 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-16 00:50:50,769 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-16 00:50:52,807 [ scc.config] DEBUG Found github.token 2025-04-16 00:50:52,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:52,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:50:53,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:53,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:50:53,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:53,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-16 00:50:53,789 [ scc.gh] DEBUG 4379 remaining from 5000 (Reset at 01:04 2025-04-16 00:50:53,790 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:50:53,792 [ scc.git] DEBUG Check current status 2025-04-16 00:50:53,792 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:50:53,794 [ scc.git] DEBUG 294674f merge master -Dorg -Snone 2025-04-16 00:50:53,795 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:50:53,835 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-16 00:50:53,838 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-16 00:50:54,164 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-16 00:50:54,169 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-16 00:50:54,173 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-16 00:50:54,176 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:50:54,176 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-04-16 00:50:54,177 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-16 00:50:54,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:54,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-16 00:50:54,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:54,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:50:55,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:55,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:50:55,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:55,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:50:56,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:56,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:50:56,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:50:56,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-16 00:50:56,259 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:50:56,261 [ scc.git] DEBUG Check current status 2025-04-16 00:50:56,261 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:50:56,264 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-04-16 00:50:56,264 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:50:56,302 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:50:56,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:56,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-04-16 00:50:56,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:57,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:50:57,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:57,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:50:57,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:58,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:50:58,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:58,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:50:58,484 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:50:58,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:50:58,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-16 00:50:58,523 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:50:58,525 [ scc.git] DEBUG Check current status 2025-04-16 00:50:58,525 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:50:58,528 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-04-16 00:50:58,528 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:50:58,567 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:50:58,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:59,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-04-16 00:50:59,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:59,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:50:59,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:50:59,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:51:00,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:00,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:51:00,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:00,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:51:00,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:00,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:00,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-16 00:51:00,924 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:51:00,927 [ scc.git] DEBUG Check current status 2025-04-16 00:51:00,927 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:51:00,930 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-04-16 00:51:00,930 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:51:00,971 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:51:01,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:01,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-04-16 00:51:01,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:01,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:51:02,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:02,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:51:02,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:02,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:51:03,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:03,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:51:03,267 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:03,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:03,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-16 00:51:03,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:51:03,310 [ scc.git] DEBUG Check current status 2025-04-16 00:51:03,310 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:51:03,312 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-16 00:51:03,312 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:51:03,352 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:51:03,352 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-04-16 00:51:03,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:03,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-04-16 00:51:04,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:04,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:51:04,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:04,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:51:04,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:05,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:51:05,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:51:05,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:05,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:05,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-16 00:51:05,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-16 00:51:05,621 [ scc.git] DEBUG Check current status 2025-04-16 00:51:05,621 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:51:05,624 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-04-16 00:51:05,624 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:51:05,663 [ scc.config] DEBUG Found remote.origin.url 2025-04-16 00:51:05,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:06,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-04-16 00:51:06,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:06,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-16 00:51:06,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:07,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-16 00:51:07,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:07,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-16 00:51:07,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:07,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-16 00:51:07,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:07,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:07,967 [ scc.git] DEBUG Resetting... 2025-04-16 00:51:07,967 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-16 00:51:07,971 [ scc.git] DEBUG HEAD is now at 294674f merge master -Dorg -Snone 2025-04-16 00:51:07,971 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-16 00:51:08,024 [ scc.git] DEBUG Check current status 2025-04-16 00:51:08,024 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-16 00:51:08,026 [ scc.git] DEBUG 294674f merge master -Dorg -Snone 2025-04-16 00:51:08,026 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-16 00:51:08,064 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-16 00:51:08,068 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-16 00:51:08,076 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-16 00:51:08,081 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-16 00:51:08,085 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-16 00:51:08,086 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-16 00:51:08,086 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-16 00:51:08,086 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-16 00:51:08,086 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-16 00:51:08,086 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-16 00:51:08,086 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-04-16 00:51:08,086 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:51:08,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:08,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-04-16 00:51:08,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:08,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/319 HTTP/1.1" 200 None 2025-04-16 00:51:08,963 [ scc.repo] DEBUG # ... Include label: dependencies 2025-04-16 00:51:09,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:09,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/8e193e989c0a7d407adb6c124c739d5abac9a403 HTTP/1.1" 200 None 2025-04-16 00:51:09,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:10,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/8e193e989c0a7d407adb6c124c739d5abac9a403/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:10,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:10,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/8e193e989c0a7d407adb6c124c739d5abac9a403 HTTP/1.1" 200 None 2025-04-16 00:51:10,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:10,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/8e193e989c0a7d407adb6c124c739d5abac9a403?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:10,915 [ scc.repo] DEBUG - PR 319 dependabot[bot] 'Bump omero-py from `2037276` to `e485be4`' 2025-04-16 00:51:10,915 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:51:10,915 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:10,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:10,917 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-16 00:51:10,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:51:10,919 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-16 00:51:10,922 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-16 00:51:10,925 [ scc.git] DEBUG Already up to date. 2025-04-16 00:51:10,925 [ scc.git] DEBUG Calling 'git fetch origin pull/319/head' 2025-04-16 00:51:11,200 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-04-16 00:51:11,201 [ scc.git] DEBUG * branch refs/pull/319/head -> FETCH_HEAD 2025-04-16 00:51:11,206 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:51:11,206 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:11,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:11,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e193e989c0a7d407adb6c124c739d5abac9a403' 2025-04-16 00:51:11,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:11,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 319 (Bump omero-py from `2037276` to `e485be4`) 8e193e989c0a7d407adb6c124c739d5abac9a403' 2025-04-16 00:51:11,216 [ scc.git] DEBUG Already up to date. 2025-04-16 00:51:11,217 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:11,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:11,402 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:51:11,443 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:11,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:11,445 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:51:11,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:11,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-04-16 00:51:12,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:12,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-04-16 00:51:12,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:13,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-04-16 00:51:13,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:13,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-16 00:51:13,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:14,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:14,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:14,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-16 00:51:14,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:15,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:15,059 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-16 00:51:15,059 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:51:15,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-16 00:51:15,060 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:15,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:15,062 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-16 00:51:15,064 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:51:15,064 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-16 00:51:15,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-16 00:51:15,070 [ scc.git] DEBUG Already up to date. 2025-04-16 00:51:15,070 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-04-16 00:51:15,360 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-04-16 00:51:15,360 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-04-16 00:51:15,365 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:51:15,365 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:15,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:15,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-16 00:51:15,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:15,373 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-04-16 00:51:15,470 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-04-16 00:51:15,472 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-04-16 00:51:15,476 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-04-16 00:51:15,476 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-04-16 00:51:15,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:15,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:15,634 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:51:15,672 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:15,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:15,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:15,712 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:51:15,716 [ scc.git] DEBUG has no local changes 2025-04-16 00:51:15,716 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:51:15,723 [ scc.git] DEBUG [detached HEAD a574216] merge master -Dorg -Ssuccess-only 2025-04-16 00:51:15,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:15,724 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:51:15,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:16,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-04-16 00:51:16,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:16,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-04-16 00:51:16,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:17,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-04-16 00:51:17,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:17,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-04-16 00:51:17,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:18,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-04-16 00:51:18,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:18,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-16 00:51:18,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:19,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:19,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:19,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-16 00:51:19,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:20,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:20,146 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-16 00:51:20,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:20,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-04-16 00:51:20,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:21,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-04-16 00:51:21,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:21,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-04-16 00:51:21,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:22,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-04-16 00:51:22,155 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:51:22,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-16 00:51:22,155 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:22,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:22,158 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-16 00:51:22,160 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:51:22,160 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-16 00:51:22,164 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-16 00:51:22,167 [ scc.git] DEBUG Already up to date. 2025-04-16 00:51:22,167 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-04-16 00:51:22,598 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-04-16 00:51:22,598 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-04-16 00:51:22,603 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:51:22,603 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:22,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:22,605 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-16 00:51:22,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:22,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-16 00:51:22,677 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-04-16 00:51:22,678 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:22,681 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-04-16 00:51:22,681 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-04-16 00:51:22,681 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-04-16 00:51:22,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:22,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:22,843 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:51:22,882 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:22,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:22,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:22,921 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:51:22,925 [ scc.git] DEBUG has no local changes 2025-04-16 00:51:22,925 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:51:22,932 [ scc.git] DEBUG [detached HEAD 49093ef] merge master -Dorg -Ssuccess-only 2025-04-16 00:51:22,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:22,933 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:51:23,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:23,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-04-16 00:51:23,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:23,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-04-16 00:51:24,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:24,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-04-16 00:51:24,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:25,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-16 00:51:25,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:25,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:25,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:26,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:51:26,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:26,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-16 00:51:26,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:26,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:27,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:27,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-16 00:51:27,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:27,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-04-16 00:51:27,896 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-16 00:51:28,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:28,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-04-16 00:51:28,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:28,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-04-16 00:51:29,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:29,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-04-16 00:51:29,434 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-04-16 00:51:29,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:29,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-04-16 00:51:30,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:30,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-04-16 00:51:30,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:30,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-16 00:51:31,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:31,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:31,740 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:32,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:51:32,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:32,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-16 00:51:32,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:32,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:33,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:33,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-16 00:51:33,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:33,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-04-16 00:51:33,966 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-04-16 00:51:34,217 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:34,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-04-16 00:51:34,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:34,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-04-16 00:51:35,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:35,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-04-16 00:51:35,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:35,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:36,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:36,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:51:36,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:36,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-04-16 00:51:37,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:37,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-04-16 00:51:37,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:37,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-16 00:51:38,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:38,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:38,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:38,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-16 00:51:39,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:39,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:39,397 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-04-16 00:51:39,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:39,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-04-16 00:51:40,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:40,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-04-16 00:51:40,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:40,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-16 00:51:41,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:41,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:41,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:41,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-16 00:51:42,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:42,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:42,382 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-04-16 00:51:42,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:42,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-04-16 00:51:43,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:43,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-04-16 00:51:43,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:43,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-04-16 00:51:44,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:44,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-04-16 00:51:44,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:44,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-16 00:51:45,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:45,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:45,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:45,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-16 00:51:46,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:46,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:46,370 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-04-16 00:51:46,371 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:51:46,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-16 00:51:46,371 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:46,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:46,374 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-16 00:51:46,376 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:51:46,376 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-16 00:51:46,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-16 00:51:46,382 [ scc.git] DEBUG Already up to date. 2025-04-16 00:51:46,382 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-04-16 00:51:46,790 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-16 00:51:46,790 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-04-16 00:51:46,795 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-04-16 00:51:47,201 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-16 00:51:47,202 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-04-16 00:51:47,206 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-04-16 00:51:47,535 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-16 00:51:47,535 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-04-16 00:51:47,539 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-04-16 00:51:48,021 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-16 00:51:48,021 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-04-16 00:51:48,026 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-04-16 00:51:48,974 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-16 00:51:48,975 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-04-16 00:51:48,978 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:51:48,979 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:48,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:48,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-16 00:51:48,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:48,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-16 00:51:49,091 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-04-16 00:51:49,091 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-04-16 00:51:49,092 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:49,097 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-04-16 00:51:49,097 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-04-16 00:51:49,097 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-04-16 00:51:49,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:49,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:49,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-16 00:51:49,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:49,287 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-16 00:51:49,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:49,358 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-04-16 00:51:49,359 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-04-16 00:51:49,359 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-04-16 00:51:49,359 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-04-16 00:51:49,359 [ scc.git] DEBUG create mode 100644 connect.py 2025-04-16 00:51:49,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:49,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:49,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-04-16 00:51:49,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:49,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-04-16 00:51:49,797 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-04-16 00:51:49,798 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:49,802 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-04-16 00:51:49,802 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-04-16 00:51:49,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:50,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:50,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-16 00:51:50,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:50,124 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-16 00:51:50,482 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-16 00:51:50,483 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:50,490 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-04-16 00:51:50,490 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-04-16 00:51:50,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:50,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:50,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-16 00:51:50,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:50,687 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-16 00:51:50,824 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-16 00:51:50,825 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:51:50,832 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-04-16 00:51:50,832 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-04-16 00:51:50,832 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-04-16 00:51:50,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:51,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:51:51,088 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:51:51,127 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:51:51,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:51:51,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:51:51,166 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:51:51,173 [ scc.git] DEBUG has no local changes 2025-04-16 00:51:51,173 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:51:51,180 [ scc.git] DEBUG [detached HEAD 841b22f0] merge master -Dorg -Ssuccess-only 2025-04-16 00:51:51,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:51:51,181 [ scc.git] INFO Overriding base-branch from master to develop 2025-04-16 00:51:51,181 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:51:51,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:51,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-04-16 00:51:51,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:52,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-04-16 00:51:52,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:52,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-04-16 00:51:52,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:53,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-16 00:51:53,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:53,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:53,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:54,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:51:54,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:54,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-16 00:51:54,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:55,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:55,032 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-16 00:51:55,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:55,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-04-16 00:51:55,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:56,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-04-16 00:51:56,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:56,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-16 00:51:56,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:57,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:51:57,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:57,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-16 00:51:57,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:58,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:51:58,031 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-16 00:51:58,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:58,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-04-16 00:51:58,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:59,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-04-16 00:51:59,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:51:59,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-04-16 00:51:59,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:00,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-04-16 00:52:00,222 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:52:00,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-16 00:52:00,222 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:52:00,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:52:00,225 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-04-16 00:52:00,227 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:52:00,227 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-04-16 00:52:00,230 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-04-16 00:52:00,233 [ scc.git] DEBUG Already up to date. 2025-04-16 00:52:00,234 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-04-16 00:52:01,421 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-16 00:52:01,422 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-04-16 00:52:01,426 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-04-16 00:52:02,172 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-16 00:52:02,172 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-04-16 00:52:02,177 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:52:02,177 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:52:02,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:52:02,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-16 00:52:02,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:52:02,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-16 00:52:02,291 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-04-16 00:52:02,291 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-04-16 00:52:02,291 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-04-16 00:52:02,294 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-16 00:52:02,298 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-16 00:52:02,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:02,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:52:02,478 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-16 00:52:02,484 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-16 00:52:02,488 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#379](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-04-16 00:52:02,490 [ scc.config] DEBUG Found github.token 2025-04-16 00:52:02,490 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-04-16 00:52:02,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-16 00:52:02,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:52:02,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-16 00:52:02,507 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:52:02,510 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-04-16 00:52:02,510 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-04-16 00:52:02,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:02,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:52:02,895 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:52:02,933 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:52:02,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:52:02,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:52:02,972 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:52:02,976 [ scc.git] DEBUG has no local changes 2025-04-16 00:52:02,976 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:52:02,983 [ scc.git] DEBUG [detached HEAD 3a6e1fe] merge master -Dorg -Ssuccess-only 2025-04-16 00:52:02,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:52:02,983 [ scc.repo] DEBUG ## PRs found: 2025-04-16 00:52:03,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:03,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-04-16 00:52:03,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:04,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-04-16 00:52:04,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:04,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-04-16 00:52:04,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:05,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-16 00:52:05,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:05,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:05,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:06,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:06,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:06,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-16 00:52:06,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:07,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:07,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:07,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-16 00:52:07,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:07,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-04-16 00:52:07,989 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-16 00:52:08,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:08,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-04-16 00:52:08,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:08,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-04-16 00:52:09,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:09,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-16 00:52:09,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:09,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:10,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:10,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:10,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:10,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-16 00:52:11,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:11,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:11,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:11,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-16 00:52:12,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:12,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-04-16 00:52:12,355 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-04-16 00:52:12,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:12,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-04-16 00:52:13,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:13,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-04-16 00:52:13,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:13,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-16 00:52:14,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:14,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:14,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:14,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:15,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:15,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-16 00:52:15,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:15,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:16,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:16,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-16 00:52:16,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:16,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-04-16 00:52:16,870 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-04-16 00:52:17,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:17,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-04-16 00:52:17,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:17,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-04-16 00:52:18,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-16 00:52:18,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:18,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:19,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:19,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:19,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:19,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-16 00:52:20,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:20,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:20,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:20,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-16 00:52:21,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:21,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-04-16 00:52:21,274 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-16 00:52:21,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:21,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-04-16 00:52:22,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:22,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-16 00:52:22,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:22,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:23,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:23,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:23,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:23,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-16 00:52:24,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:24,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:24,478 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:24,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-16 00:52:25,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:25,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-04-16 00:52:25,231 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-16 00:52:25,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:25,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-04-16 00:52:25,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:26,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-04-16 00:52:26,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:26,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-16 00:52:26,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:27,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:27,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:27,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:27,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:28,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-16 00:52:28,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:28,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:28,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:29,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-16 00:52:29,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:29,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-04-16 00:52:29,526 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-04-16 00:52:29,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:30,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-04-16 00:52:30,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:30,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-16 00:52:30,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:31,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:31,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:31,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:31,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:32,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-16 00:52:32,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:32,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:32,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:33,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-16 00:52:33,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:33,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-04-16 00:52:33,464 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-16 00:52:33,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:33,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-04-16 00:52:34,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:34,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-04-16 00:52:34,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:34,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-16 00:52:35,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:35,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:35,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:35,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:36,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:36,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-16 00:52:36,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:36,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:37,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:37,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-16 00:52:37,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:37,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-04-16 00:52:37,806 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-16 00:52:38,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:38,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-04-16 00:52:38,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:38,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-04-16 00:52:39,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:39,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-16 00:52:39,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:39,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:40,034 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:40,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:40,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:40,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-16 00:52:41,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:41,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:41,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:41,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-16 00:52:42,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:42,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-04-16 00:52:42,202 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-16 00:52:42,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:42,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-04-16 00:52:42,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:43,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-04-16 00:52:43,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:43,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-04-16 00:52:43,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:44,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-04-16 00:52:44,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:44,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-16 00:52:44,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:45,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:45,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:45,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:45,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:46,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-16 00:52:46,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:46,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:46,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:47,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-16 00:52:47,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:47,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2025-04-16 00:52:47,593 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-16 00:52:47,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:48,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-04-16 00:52:48,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:48,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-04-16 00:52:48,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:49,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-16 00:52:49,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:49,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:49,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:50,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-16 00:52:50,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:50,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-04-16 00:52:50,581 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-16 00:52:50,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:51,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-04-16 00:52:51,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:51,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-04-16 00:52:51,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:52,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-04-16 00:52:52,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:52,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-16 00:52:52,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:52:53,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-16 00:52:53,195 [ scc.repo] DEBUG ## Branches found: 2025-04-16 00:52:53,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-16 00:52:53,195 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:52:53,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:52:53,198 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-16 00:52:53,201 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-16 00:52:53,201 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-16 00:52:53,265 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-16 00:52:53,268 [ scc.git] DEBUG Already up to date. 2025-04-16 00:52:53,269 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-04-16 00:52:55,690 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:55,690 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-04-16 00:52:55,695 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-04-16 00:52:55,990 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:55,990 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-04-16 00:52:55,994 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-04-16 00:52:57,067 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:57,067 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-04-16 00:52:57,072 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-04-16 00:52:57,575 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:57,575 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-04-16 00:52:57,579 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-04-16 00:52:57,855 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:57,855 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-04-16 00:52:57,859 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-04-16 00:52:58,737 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:58,737 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-04-16 00:52:58,741 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-04-16 00:52:59,099 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:59,099 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-04-16 00:52:59,103 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-04-16 00:52:59,568 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:52:59,568 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-04-16 00:52:59,572 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-04-16 00:53:00,166 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:53:00,166 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-04-16 00:53:00,170 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-04-16 00:53:00,838 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:53:00,838 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-04-16 00:53:00,842 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-04-16 00:53:01,181 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-16 00:53:01,181 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-04-16 00:53:01,186 [ scc.git] DEBUG ## Unique users: [] 2025-04-16 00:53:01,186 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:53:01,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:01,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-16 00:53:01,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:01,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-16 00:53:01,299 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-04-16 00:53:01,299 [ scc.git] DEBUG Auto-merging setup.py 2025-04-16 00:53:01,301 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:01,305 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-04-16 00:53:01,305 [ scc.git] DEBUG setup.py | 1 + 2025-04-16 00:53:01,305 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-04-16 00:53:01,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:01,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:01,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-16 00:53:01,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:01,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-16 00:53:01,630 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-04-16 00:53:01,630 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-04-16 00:53:01,631 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:01,636 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-04-16 00:53:01,636 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-04-16 00:53:01,636 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-04-16 00:53:01,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:01,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:01,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-16 00:53:01,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:01,895 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-16 00:53:01,997 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:02,001 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-04-16 00:53:02,001 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-16 00:53:02,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:02,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:02,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-16 00:53:02,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:02,308 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-16 00:53:02,400 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:02,404 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-04-16 00:53:02,404 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-04-16 00:53:02,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:02,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:02,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-16 00:53:02,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:02,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-16 00:53:02,958 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:02,963 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-04-16 00:53:02,964 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-04-16 00:53:02,964 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-04-16 00:53:03,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:03,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:03,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-16 00:53:03,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:03,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-16 00:53:03,684 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-04-16 00:53:03,685 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:03,692 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-04-16 00:53:03,692 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-04-16 00:53:03,692 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-04-16 00:53:03,692 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-04-16 00:53:03,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:03,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:03,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-16 00:53:03,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:03,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-16 00:53:04,112 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:04,116 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-04-16 00:53:04,116 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-04-16 00:53:04,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:04,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:04,279 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-16 00:53:04,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:04,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-16 00:53:04,394 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:04,398 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-04-16 00:53:04,398 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-04-16 00:53:04,398 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-04-16 00:53:04,530 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:04,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:04,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-16 00:53:04,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:04,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-16 00:53:04,932 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:04,936 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-04-16 00:53:04,937 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-04-16 00:53:04,937 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-04-16 00:53:04,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:05,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:05,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-16 00:53:05,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:05,104 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-16 00:53:05,124 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:05,127 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-04-16 00:53:05,127 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-04-16 00:53:05,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:05,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:05,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-16 00:53:05,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:05,521 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-16 00:53:05,539 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-16 00:53:05,543 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-04-16 00:53:05,543 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-16 00:53:05,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:05,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:05,942 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-16 00:53:05,980 [ scc.git] DEBUG Get sha1 of %s 2025-04-16 00:53:05,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-16 00:53:05,982 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:53:06,018 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:53:06,026 [ scc.git] DEBUG has no local changes 2025-04-16 00:53:06,026 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:53:06,036 [ scc.git] DEBUG [detached HEAD 58f9fd8d0] merge master -Dorg -Ssuccess-only 2025-04-16 00:53:06,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:53:06,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-16 00:53:06,084 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-04-16 00:53:06,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:06,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:06,366 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-04-16 00:53:06,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:06,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:06,775 [ scc.config] DEBUG Found submodule.omero-py.url 2025-04-16 00:53:07,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:07,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:07,192 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-04-16 00:53:07,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:07,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:07,606 [ scc.config] DEBUG Found submodule.omero-web.url 2025-04-16 00:53:07,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-16 00:53:08,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-16 00:53:08,027 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-16 00:53:08,055 [ scc.git] DEBUG has local changes 2025-04-16 00:53:08,055 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 319 dependabot[bot] 'Bump omero-py from `2037276` to `e485be4`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#379 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/379/)' 2025-04-16 00:53:08,063 [ scc.git] DEBUG [detached HEAD 3b3563b] merge master -Dorg -Ssuccess-only 2025-04-16 00:53:08,063 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-04-16 00:53:08,063 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-16 00:53:08,063 [ scc.merge] INFO Already up to date. 2025-04-16 00:53:08,063 [ scc.merge] INFO 2025-04-16 00:53:08,063 [ scc.merge] INFO Merged PRs: 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 319 dependabot[bot] 'Bump omero-py from `2037276` to `e485be4`' 2025-04-16 00:53:08,063 [ scc.merge] INFO 2025-04-16 00:53:08,063 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-04-16 00:53:08,063 [ scc.merge] INFO Already up to date. 2025-04-16 00:53:08,063 [ scc.merge] INFO 2025-04-16 00:53:08,063 [ scc.merge] INFO Merged PRs: 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-16 00:53:08,063 [ scc.merge] INFO 2025-04-16 00:53:08,063 [ scc.merge] INFO Repository: ome/omero-marshal 2025-04-16 00:53:08,063 [ scc.merge] INFO Excluded PRs: 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-04-16 00:53:08,063 [ scc.merge] INFO Already up to date. 2025-04-16 00:53:08,063 [ scc.merge] INFO 2025-04-16 00:53:08,063 [ scc.merge] INFO Merged PRs: 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-16 00:53:08,063 [ scc.merge] INFO 2025-04-16 00:53:08,063 [ scc.merge] INFO Repository: ome/omero-py 2025-04-16 00:53:08,063 [ scc.merge] INFO Excluded PRs: 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-04-16 00:53:08,063 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-04-16 00:53:08,064 [ scc.merge] INFO Already up to date. 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,064 [ scc.merge] INFO Merged PRs: 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,064 [ scc.merge] INFO Repository: ome/omero-scripts 2025-04-16 00:53:08,064 [ scc.merge] INFO Excluded PRs: 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-04-16 00:53:08,064 [ scc.merge] INFO Already up to date. 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,064 [ scc.merge] INFO Merged PRs: 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,064 [ scc.merge] INFO Conflicting PRs (not included): 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,064 [ scc.merge] INFO Repository: ome/omero-web 2025-04-16 00:53:08,064 [ scc.merge] INFO Excluded PRs: 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-04-16 00:53:08,064 [ scc.merge] INFO Already up to date. 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,064 [ scc.merge] INFO Merged PRs: 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-04-16 00:53:08,064 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-16 00:53:08,064 [ scc.merge] INFO 2025-04-16 00:53:08,065 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-16 00:53:08,065 [ scc.git] DEBUG Calling 'git remote' 2025-04-16 00:53:08,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-16 00:53:08,067 [ scc.git] DEBUG Calling 'git remote' 2025-04-16 00:53:08,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:53:08,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-16 00:53:08,069 [ scc.git] DEBUG Calling 'git remote' 2025-04-16 00:53:08,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:53:08,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-16 00:53:08,071 [ scc.git] DEBUG Calling 'git remote' 2025-04-16 00:53:08,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:53:08,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-16 00:53:08,074 [ scc.git] DEBUG Calling 'git remote' 2025-04-16 00:53:08,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-16 00:53:08,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-16 00:53:08,076 [ scc.git] DEBUG Calling 'git remote' 2025-04-16 00:53:08,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 1ac5a0c nothing to commit, working tree clean 2025-04-16 00:53:37,148 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS