Started by upstream project "Trigger" build number 457 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 412 [Pipeline] sh > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-05-01 01:14:16,111 [ scc.config] DEBUG Found github.token 2025-05-01 01:14:16,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:16,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:14:16,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:16,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:14:16,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:17,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-01 01:14:17,114 [ scc.gh] DEBUG 3464 remaining from 5000 (Reset at 01:05 2025-05-01 01:14:17,114 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:17,116 [ scc.git] DEBUG Check current status 2025-05-01 01:14:17,117 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:17,119 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-01 01:14:17,119 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:17,177 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-01 01:14:17,358 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-01 01:14:20,395 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-01 01:14:20,401 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-01 01:14:20,405 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-01 01:14:20,408 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:20,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:20,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-01 01:14:20,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:21,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:21,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:21,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:21,875 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:22,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:22,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:22,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:22,498 [ scc.git] DEBUG Resetting... 2025-05-01 01:14:22,498 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-01 01:14:22,504 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-01 01:14:22,504 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-01 01:14:22,558 [ scc.git] DEBUG Check current status 2025-05-01 01:14:22,558 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:22,560 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-01 01:14:22,561 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:22,600 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-01 01:14:22,604 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-01 01:14:22,613 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-01 01:14:22,617 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-01 01:14:22,621 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-01 01:14:22,622 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-01 01:14:22,622 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-01 01:14:22,622 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-01 01:14:22,622 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-01 01:14:22,622 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-01 01:14:22,622 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:14:22,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:22,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-01 01:14:22,950 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:14:22,950 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:22,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:22,952 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-01 01:14:22,954 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:14:22,955 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-01 01:14:22,957 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-01 01:14:22,960 [ scc.git] DEBUG Already up to date. 2025-05-01 01:14:22,960 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:14:22,960 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:22,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:22,962 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:14:23,001 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:23,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:23,004 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:14:23,672 [ scc.git] DEBUG has no local changes 2025-05-01 01:14:23,672 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:14:23,699 [ scc.git] DEBUG [detached HEAD 365bfe4] merge master -Dorg -Snone 2025-05-01 01:14:23,699 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-01 01:14:23,700 [ scc.merge] INFO Already up to date. 2025-05-01 01:14:23,700 [ scc.merge] INFO 2025-05-01 01:14:23,700 [ scc.merge] INFO 2025-05-01 01:14:23,700 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-01 01:14:23,700 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-01 01:14:25,924 [ scc.config] DEBUG Found github.token 2025-05-01 01:14:25,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:26,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:14:26,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:26,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:14:26,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:26,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-01 01:14:26,926 [ scc.gh] DEBUG 3456 remaining from 5000 (Reset at 01:05 2025-05-01 01:14:26,927 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:26,929 [ scc.git] DEBUG Check current status 2025-05-01 01:14:26,929 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:26,931 [ scc.git] DEBUG 365bfe4 merge master -Dorg -Snone 2025-05-01 01:14:26,932 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:26,971 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-01 01:14:26,974 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-01 01:14:26,983 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-01 01:14:26,988 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-01 01:14:26,992 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-01 01:14:26,994 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:26,994 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-05-01 01:14:26,996 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-01 01:14:27,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:27,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-01 01:14:27,699 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:27,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:28,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:28,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:28,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:28,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:29,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:29,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:29,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:29,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-01 01:14:29,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:29,344 [ scc.git] DEBUG Check current status 2025-05-01 01:14:29,344 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:29,347 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-05-01 01:14:29,347 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:29,386 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:29,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:29,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-05-01 01:14:30,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:30,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:30,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:30,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:30,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:31,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:31,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:31,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:31,615 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:31,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:31,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-01 01:14:31,653 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:31,656 [ scc.git] DEBUG Check current status 2025-05-01 01:14:31,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:31,658 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-05-01 01:14:31,658 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:31,697 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:31,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:32,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-05-01 01:14:32,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:32,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:32,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:33,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:33,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:33,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:33,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:33,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:33,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:33,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:33,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-01 01:14:33,980 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:33,982 [ scc.git] DEBUG Check current status 2025-05-01 01:14:33,982 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:33,985 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-05-01 01:14:33,985 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:34,024 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:34,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:34,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-05-01 01:14:34,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:34,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:35,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:35,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:35,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:35,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:36,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:36,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:36,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:36,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:36,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-01 01:14:36,275 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:36,278 [ scc.git] DEBUG Check current status 2025-05-01 01:14:36,278 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:36,280 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-01 01:14:36,281 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:36,320 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:36,321 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-05-01 01:14:36,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:36,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-05-01 01:14:36,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:37,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:37,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:37,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:37,912 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:38,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:38,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:38,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:38,520 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:38,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:38,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-01 01:14:38,560 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-01 01:14:38,563 [ scc.git] DEBUG Check current status 2025-05-01 01:14:38,563 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:38,566 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-05-01 01:14:38,566 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:38,608 [ scc.config] DEBUG Found remote.origin.url 2025-05-01 01:14:38,770 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:39,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-05-01 01:14:39,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:39,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-01 01:14:39,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:39,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-01 01:14:40,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:40,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-01 01:14:40,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:40,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-01 01:14:40,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:40,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:40,838 [ scc.git] DEBUG Resetting... 2025-05-01 01:14:40,838 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-01 01:14:40,843 [ scc.git] DEBUG HEAD is now at 365bfe4 merge master -Dorg -Snone 2025-05-01 01:14:40,843 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-01 01:14:40,895 [ scc.git] DEBUG Check current status 2025-05-01 01:14:40,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-01 01:14:40,898 [ scc.git] DEBUG 365bfe4 merge master -Dorg -Snone 2025-05-01 01:14:40,898 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-01 01:14:40,938 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-01 01:14:40,941 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-01 01:14:40,951 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-01 01:14:40,955 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-01 01:14:40,959 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-01 01:14:40,960 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-01 01:14:40,960 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-01 01:14:40,961 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-01 01:14:40,961 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-01 01:14:40,961 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-01 01:14:40,961 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-05-01 01:14:40,961 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:14:41,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:41,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-01 01:14:41,231 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:14:41,231 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:41,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:41,234 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-01 01:14:41,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:14:41,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-01 01:14:41,239 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-01 01:14:41,242 [ scc.git] DEBUG Already up to date. 2025-05-01 01:14:41,242 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:14:41,242 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:41,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:41,245 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:14:41,286 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:41,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:41,289 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:14:41,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:41,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-05-01 01:14:42,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:42,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-05-01 01:14:42,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:42,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-05-01 01:14:43,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:43,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-01 01:14:43,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:43,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:14:44,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:44,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-01 01:14:44,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:44,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:14:44,888 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-01 01:14:44,888 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:14:44,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-01 01:14:44,888 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:44,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:44,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-01 01:14:44,893 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:14:44,893 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-01 01:14:44,896 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-01 01:14:44,899 [ scc.git] DEBUG Already up to date. 2025-05-01 01:14:44,899 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-05-01 01:14:45,252 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-05-01 01:14:45,252 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-05-01 01:14:45,256 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:14:45,256 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:45,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:45,259 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-01 01:14:45,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:45,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-05-01 01:14:45,383 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-05-01 01:14:45,384 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-05-01 01:14:45,388 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-05-01 01:14:45,389 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-05-01 01:14:45,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:45,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:14:45,556 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:14:45,594 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:45,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:45,597 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:45,633 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:14:45,637 [ scc.git] DEBUG has no local changes 2025-05-01 01:14:45,637 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:14:45,644 [ scc.git] DEBUG [detached HEAD 41b01be] merge master -Dorg -Ssuccess-only 2025-05-01 01:14:45,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:45,645 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:14:45,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:46,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-05-01 01:14:46,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:46,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-05-01 01:14:46,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:47,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-05-01 01:14:47,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:47,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-05-01 01:14:47,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:48,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-05-01 01:14:48,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:48,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-01 01:14:48,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:49,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:14:49,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:49,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-01 01:14:49,842 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:50,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:14:50,034 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-01 01:14:50,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:50,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-05-01 01:14:50,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:50,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-05-01 01:14:51,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:51,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-05-01 01:14:51,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:51,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-05-01 01:14:51,944 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:14:51,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-01 01:14:51,944 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:51,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:51,947 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-01 01:14:51,950 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:14:51,950 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-01 01:14:51,953 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-01 01:14:51,956 [ scc.git] DEBUG Already up to date. 2025-05-01 01:14:51,956 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-05-01 01:14:52,354 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-05-01 01:14:52,354 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-05-01 01:14:52,358 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:14:52,358 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:52,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:52,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-01 01:14:52,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:52,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-01 01:14:52,379 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-05-01 01:14:52,380 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:14:52,383 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-05-01 01:14:52,383 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-05-01 01:14:52,383 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-05-01 01:14:52,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:52,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:14:52,569 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:14:52,607 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:14:52,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:14:52,609 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:14:52,647 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:14:52,651 [ scc.git] DEBUG has no local changes 2025-05-01 01:14:52,651 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:14:52,658 [ scc.git] DEBUG [detached HEAD 9258d2d] merge master -Dorg -Ssuccess-only 2025-05-01 01:14:52,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:14:52,658 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:14:52,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:53,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-05-01 01:14:53,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:53,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-05-01 01:14:53,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:54,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-05-01 01:14:54,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:54,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-01 01:14:55,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:55,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:14:55,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:55,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:14:56,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:56,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-01 01:14:56,595 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:56,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:14:57,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:57,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-01 01:14:57,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:57,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-05-01 01:14:57,670 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-01 01:14:57,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:58,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-05-01 01:14:58,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:58,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-05-01 01:14:58,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:59,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-05-01 01:14:59,180 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-05-01 01:14:59,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:14:59,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-05-01 01:14:59,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:00,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-05-01 01:15:00,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:00,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-01 01:15:00,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:01,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:01,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:01,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:02,030 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:02,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-01 01:15:02,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:02,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:03,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:03,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-01 01:15:03,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:03,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-05-01 01:15:03,751 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-05-01 01:15:04,002 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:04,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-05-01 01:15:04,533 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:04,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-05-01 01:15:05,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:05,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-05-01 01:15:05,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:05,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:06,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:06,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:06,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:06,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-05-01 01:15:07,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:07,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-05-01 01:15:07,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:07,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-01 01:15:08,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:08,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:08,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:08,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-01 01:15:09,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:09,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:15:09,326 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-05-01 01:15:09,578 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:09,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-05-01 01:15:10,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:10,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-05-01 01:15:10,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:10,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-01 01:15:11,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:11,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:11,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:11,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-01 01:15:12,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:12,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:15:12,298 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-05-01 01:15:12,549 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:12,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-05-01 01:15:13,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:13,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-05-01 01:15:13,576 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:13,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-05-01 01:15:14,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:14,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-05-01 01:15:14,593 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:14,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-01 01:15:15,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:15,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:15,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:15,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-01 01:15:16,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:16,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:15:16,309 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-05-01 01:15:16,309 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:15:16,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-01 01:15:16,310 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:15:16,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:16,312 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-01 01:15:16,315 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:15:16,315 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-01 01:15:16,318 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-01 01:15:16,321 [ scc.git] DEBUG Already up to date. 2025-05-01 01:15:16,321 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-05-01 01:15:16,625 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-01 01:15:16,625 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-05-01 01:15:16,630 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-05-01 01:15:17,166 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-01 01:15:17,166 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-05-01 01:15:17,170 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-05-01 01:15:17,525 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-01 01:15:17,526 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-05-01 01:15:17,530 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-05-01 01:15:18,029 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-01 01:15:18,029 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-05-01 01:15:18,033 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-05-01 01:15:18,974 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-01 01:15:18,974 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-05-01 01:15:18,978 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:15:18,978 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:15:18,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:18,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-01 01:15:18,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:18,995 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-01 01:15:19,266 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-05-01 01:15:19,267 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-05-01 01:15:19,268 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:15:19,272 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-05-01 01:15:19,272 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-05-01 01:15:19,272 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-05-01 01:15:19,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:19,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:19,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-01 01:15:19,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:19,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-01 01:15:19,518 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:15:19,521 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-05-01 01:15:19,521 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-05-01 01:15:19,521 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-05-01 01:15:19,521 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-05-01 01:15:19,521 [ scc.git] DEBUG create mode 100644 connect.py 2025-05-01 01:15:19,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:19,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:19,842 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-05-01 01:15:19,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:19,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-05-01 01:15:20,052 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-05-01 01:15:20,053 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:15:20,057 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-05-01 01:15:20,057 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-05-01 01:15:20,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:20,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:20,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-01 01:15:20,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:20,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-01 01:15:20,597 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-01 01:15:20,598 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:15:20,605 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-05-01 01:15:20,605 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-05-01 01:15:20,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:20,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:20,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-01 01:15:20,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:20,783 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-01 01:15:20,841 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-01 01:15:20,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:15:20,849 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-05-01 01:15:20,849 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-05-01 01:15:20,849 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-05-01 01:15:21,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:21,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:21,186 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:15:21,224 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:15:21,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:21,226 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:15:21,264 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:15:21,271 [ scc.git] DEBUG has no local changes 2025-05-01 01:15:21,271 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:15:21,278 [ scc.git] DEBUG [detached HEAD f2dc3f8a] merge master -Dorg -Ssuccess-only 2025-05-01 01:15:21,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:15:21,278 [ scc.git] INFO Overriding base-branch from master to develop 2025-05-01 01:15:21,278 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:15:21,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:21,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-05-01 01:15:21,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:22,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-05-01 01:15:22,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:22,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-05-01 01:15:22,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:23,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-01 01:15:23,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:23,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:24,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:24,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:24,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-01 01:15:24,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:25,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:15:25,164 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-01 01:15:25,414 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:25,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-05-01 01:15:25,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:26,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-05-01 01:15:26,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:26,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-01 01:15:26,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:27,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:27,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:27,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-01 01:15:27,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:28,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:15:28,051 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-01 01:15:28,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:28,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-05-01 01:15:28,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:29,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-05-01 01:15:29,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:29,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-05-01 01:15:29,836 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:30,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-05-01 01:15:30,186 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:15:30,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-01 01:15:30,186 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:15:30,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:30,189 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-05-01 01:15:30,191 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:15:30,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-05-01 01:15:30,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-05-01 01:15:30,198 [ scc.git] DEBUG Already up to date. 2025-05-01 01:15:30,198 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-05-01 01:15:30,769 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-01 01:15:30,769 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-05-01 01:15:30,773 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-05-01 01:15:31,596 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-01 01:15:31,597 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-05-01 01:15:31,601 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:15:31,601 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:15:31,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:31,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-01 01:15:31,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:31,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-01 01:15:31,700 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-05-01 01:15:31,700 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-05-01 01:15:31,700 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-05-01 01:15:31,703 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-01 01:15:31,707 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-01 01:15:31,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:31,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:31,900 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-01 01:15:31,905 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-01 01:15:31,909 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#392](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-05-01 01:15:31,912 [ scc.config] DEBUG Found github.token 2025-05-01 01:15:31,912 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-05-01 01:15:31,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-01 01:15:31,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:31,919 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-01 01:15:31,928 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:15:31,932 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-05-01 01:15:31,932 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-05-01 01:15:32,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:32,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:15:32,317 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:15:32,355 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:15:32,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:15:32,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:15:32,395 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:15:32,399 [ scc.git] DEBUG has no local changes 2025-05-01 01:15:32,399 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:15:32,406 [ scc.git] DEBUG [detached HEAD 3a1e273] merge master -Dorg -Ssuccess-only 2025-05-01 01:15:32,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:15:32,406 [ scc.repo] DEBUG ## PRs found: 2025-05-01 01:15:32,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:32,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-05-01 01:15:33,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:33,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-05-01 01:15:33,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:33,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-05-01 01:15:34,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:34,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-01 01:15:34,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:34,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:35,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:35,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:35,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:35,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-01 01:15:36,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:36,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:36,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:36,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-01 01:15:37,157 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:37,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-05-01 01:15:37,350 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-01 01:15:37,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:37,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-05-01 01:15:38,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:38,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-05-01 01:15:38,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:38,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-01 01:15:39,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:39,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:39,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:39,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:40,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:40,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-01 01:15:40,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:40,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:41,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:41,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-01 01:15:41,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:41,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-05-01 01:15:41,773 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-05-01 01:15:42,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:42,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-05-01 01:15:42,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:42,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-05-01 01:15:43,033 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:43,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-01 01:15:43,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:43,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:44,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:44,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:44,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:44,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-01 01:15:45,052 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:45,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:45,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:45,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-01 01:15:45,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:46,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-05-01 01:15:46,121 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-05-01 01:15:46,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:46,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-05-01 01:15:46,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:47,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-05-01 01:15:47,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-01 01:15:47,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:48,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:48,344 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:48,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:48,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:49,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-01 01:15:49,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:49,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:49,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:49,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-01 01:15:50,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:50,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-05-01 01:15:50,445 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-01 01:15:50,695 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:50,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-05-01 01:15:51,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:51,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-05-01 01:15:51,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:51,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:52,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:52,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:52,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:53,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-05-01 01:15:53,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:53,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:53,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:53,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-05-01 01:15:54,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:54,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-05-01 01:15:54,431 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-01 01:15:54,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:54,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-05-01 01:15:55,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:55,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-05-01 01:15:55,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:55,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-01 01:15:56,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:56,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:56,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:57,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:15:57,261 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:57,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-01 01:15:57,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:57,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:15:58,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:58,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-01 01:15:58,701 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:58,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-05-01 01:15:58,892 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-05-01 01:15:59,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:59,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-05-01 01:15:59,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:15:59,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-01 01:16:00,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:00,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:00,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:00,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:16:01,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:01,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-01 01:16:01,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:01,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:02,079 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:02,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-01 01:16:02,559 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:02,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-05-01 01:16:02,749 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-01 01:16:02,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:03,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-05-01 01:16:03,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:03,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-05-01 01:16:03,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:04,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-01 01:16:04,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:04,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:04,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:05,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:16:05,450 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:05,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-01 01:16:05,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:06,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:06,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:06,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-01 01:16:06,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:07,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-05-01 01:16:07,083 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-01 01:16:07,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:07,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-05-01 01:16:07,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:08,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-05-01 01:16:08,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:08,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-01 01:16:08,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:09,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:09,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:09,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:16:09,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:10,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-01 01:16:10,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:10,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:10,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:10,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-01 01:16:11,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:11,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-05-01 01:16:11,432 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-01 01:16:11,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:11,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-05-01 01:16:12,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:12,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-05-01 01:16:12,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:12,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-05-01 01:16:13,210 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:13,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-05-01 01:16:13,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:14,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-01 01:16:14,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:14,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:14,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:15,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-01 01:16:15,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:15,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:16:15,502 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-01 01:16:15,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:15,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-05-01 01:16:16,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:16,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-05-01 01:16:16,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:17,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-01 01:16:17,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:17,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:17,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:18,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-01 01:16:18,285 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:18,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-05-01 01:16:18,494 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-01 01:16:18,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:18,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-05-01 01:16:19,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:19,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-05-01 01:16:19,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:19,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-05-01 01:16:20,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:20,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-01 01:16:20,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:20,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-01 01:16:20,943 [ scc.repo] DEBUG ## Branches found: 2025-05-01 01:16:20,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-01 01:16:20,944 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:16:20,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:20,946 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-01 01:16:20,949 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-01 01:16:20,949 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-01 01:16:20,970 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-01 01:16:20,973 [ scc.git] DEBUG Already up to date. 2025-05-01 01:16:20,973 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-05-01 01:16:23,479 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:23,479 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-05-01 01:16:23,484 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-05-01 01:16:23,795 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:23,795 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-05-01 01:16:23,800 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-05-01 01:16:24,459 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:24,459 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-05-01 01:16:24,463 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-05-01 01:16:24,951 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:24,951 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-05-01 01:16:24,955 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-05-01 01:16:25,232 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:25,232 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-05-01 01:16:25,236 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-05-01 01:16:25,936 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:25,936 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-05-01 01:16:25,940 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-05-01 01:16:26,401 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:26,401 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-05-01 01:16:26,405 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-05-01 01:16:26,824 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:26,824 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-05-01 01:16:26,828 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-05-01 01:16:27,271 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:27,272 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-05-01 01:16:27,276 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-05-01 01:16:28,495 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:28,495 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-05-01 01:16:28,500 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-05-01 01:16:28,825 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-01 01:16:28,826 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-05-01 01:16:28,830 [ scc.git] DEBUG ## Unique users: [] 2025-05-01 01:16:28,830 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:16:28,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:28,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-01 01:16:28,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:28,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-01 01:16:29,033 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-05-01 01:16:29,033 [ scc.git] DEBUG Auto-merging setup.py 2025-05-01 01:16:29,034 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:29,038 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-05-01 01:16:29,038 [ scc.git] DEBUG setup.py | 1 + 2025-05-01 01:16:29,038 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-05-01 01:16:29,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:29,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:29,205 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-01 01:16:29,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:29,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-01 01:16:29,349 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-05-01 01:16:29,349 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-05-01 01:16:29,351 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:29,355 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-05-01 01:16:29,355 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-05-01 01:16:29,355 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-05-01 01:16:29,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:29,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:29,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-01 01:16:29,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:29,639 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-01 01:16:29,757 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:29,761 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-05-01 01:16:29,761 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-01 01:16:29,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:30,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:30,053 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-01 01:16:30,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:30,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-01 01:16:30,165 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:30,169 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-05-01 01:16:30,169 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-05-01 01:16:30,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:30,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:30,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-01 01:16:30,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:30,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-01 01:16:30,797 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:30,803 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-05-01 01:16:30,803 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-05-01 01:16:30,803 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-05-01 01:16:30,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:30,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:30,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-01 01:16:30,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:30,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-01 01:16:31,496 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-05-01 01:16:31,498 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:31,504 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-05-01 01:16:31,504 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-05-01 01:16:31,504 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-05-01 01:16:31,504 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-05-01 01:16:31,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:31,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:31,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-05-01 01:16:31,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:31,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-05-01 01:16:31,891 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:31,896 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-05-01 01:16:31,896 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-05-01 01:16:31,911 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:32,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:32,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-01 01:16:32,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:32,089 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-01 01:16:32,230 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:32,234 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-05-01 01:16:32,234 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-05-01 01:16:32,234 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-05-01 01:16:32,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:32,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:32,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-01 01:16:32,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:32,517 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-01 01:16:32,595 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:32,599 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-05-01 01:16:32,599 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-05-01 01:16:32,599 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-05-01 01:16:32,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:32,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:32,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-01 01:16:32,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:32,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-01 01:16:32,950 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:32,954 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-05-01 01:16:32,954 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-05-01 01:16:33,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:33,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:33,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-01 01:16:33,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:33,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-01 01:16:33,362 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-01 01:16:33,365 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-05-01 01:16:33,365 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-01 01:16:33,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:33,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:33,746 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-01 01:16:33,784 [ scc.git] DEBUG Get sha1 of %s 2025-05-01 01:16:33,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-01 01:16:33,786 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:16:33,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:16:33,830 [ scc.git] DEBUG has no local changes 2025-05-01 01:16:33,830 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:16:33,839 [ scc.git] DEBUG [detached HEAD 93cbbb359] merge master -Dorg -Ssuccess-only 2025-05-01 01:16:33,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:16:33,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-01 01:16:33,884 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-05-01 01:16:33,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:34,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:34,190 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-05-01 01:16:34,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:34,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:34,607 [ scc.config] DEBUG Found submodule.omero-py.url 2025-05-01 01:16:34,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:35,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:35,013 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-05-01 01:16:35,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:35,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:35,433 [ scc.config] DEBUG Found submodule.omero-web.url 2025-05-01 01:16:35,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-01 01:16:35,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-01 01:16:35,846 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-01 01:16:35,874 [ scc.git] DEBUG has local changes 2025-05-01 01:16:35,875 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#392 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/392/)' 2025-05-01 01:16:35,882 [ scc.git] DEBUG [detached HEAD 0c57155] merge master -Dorg -Ssuccess-only 2025-05-01 01:16:35,883 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-05-01 01:16:35,883 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-01 01:16:35,883 [ scc.merge] INFO Already up to date. 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-05-01 01:16:35,883 [ scc.merge] INFO Already up to date. 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO Merged PRs: 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO Repository: ome/omero-marshal 2025-05-01 01:16:35,883 [ scc.merge] INFO Excluded PRs: 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-05-01 01:16:35,883 [ scc.merge] INFO Already up to date. 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO Merged PRs: 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO Repository: ome/omero-py 2025-05-01 01:16:35,883 [ scc.merge] INFO Excluded PRs: 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-05-01 01:16:35,883 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-05-01 01:16:35,883 [ scc.merge] INFO Already up to date. 2025-05-01 01:16:35,883 [ scc.merge] INFO 2025-05-01 01:16:35,883 [ scc.merge] INFO Merged PRs: 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-01 01:16:35,884 [ scc.merge] INFO 2025-05-01 01:16:35,884 [ scc.merge] INFO Repository: ome/omero-scripts 2025-05-01 01:16:35,884 [ scc.merge] INFO Excluded PRs: 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-05-01 01:16:35,884 [ scc.merge] INFO Already up to date. 2025-05-01 01:16:35,884 [ scc.merge] INFO 2025-05-01 01:16:35,884 [ scc.merge] INFO Merged PRs: 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-01 01:16:35,884 [ scc.merge] INFO 2025-05-01 01:16:35,884 [ scc.merge] INFO Conflicting PRs (not included): 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-01 01:16:35,884 [ scc.merge] INFO 2025-05-01 01:16:35,884 [ scc.merge] INFO Repository: ome/omero-web 2025-05-01 01:16:35,884 [ scc.merge] INFO Excluded PRs: 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-05-01 01:16:35,884 [ scc.merge] INFO Already up to date. 2025-05-01 01:16:35,884 [ scc.merge] INFO 2025-05-01 01:16:35,884 [ scc.merge] INFO Merged PRs: 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-05-01 01:16:35,884 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-01 01:16:35,884 [ scc.merge] INFO 2025-05-01 01:16:35,885 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-01 01:16:35,885 [ scc.git] DEBUG Calling 'git remote' 2025-05-01 01:16:35,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-01 01:16:35,887 [ scc.git] DEBUG Calling 'git remote' 2025-05-01 01:16:35,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:16:35,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-01 01:16:35,889 [ scc.git] DEBUG Calling 'git remote' 2025-05-01 01:16:35,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:16:35,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-01 01:16:35,891 [ scc.git] DEBUG Calling 'git remote' 2025-05-01 01:16:35,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:16:35,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-01 01:16:35,893 [ scc.git] DEBUG Calling 'git remote' 2025-05-01 01:16:35,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-01 01:16:35,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-01 01:16:35,895 [ scc.git] DEBUG Calling 'git remote' 2025-05-01 01:16:35,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-05-01 01:17:04,660 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS