Started by upstream project "Trigger" build number 521 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 461 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.14.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.4-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.6.15-py3-none-any.whl.metadata (2.4 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.4-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.4-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.6.15-py3-none-any.whl (157 kB) Using cached typing_extensions-4.14.0-py3-none-any.whl (43 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.6.15 cffi-1.17.1 charset_normalizer-3.4.2 cryptography-45.0.4 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.0 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-06-16 09:25:04,720 [ scc.config] DEBUG Found github.token 2025-06-16 09:25:04,721 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:04,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:05,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:05,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:05,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:05,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-06-16 09:25:05,777 [ scc.gh] DEBUG 3776 remaining from 5000 (Reset at 09:06 2025-06-16 09:25:05,778 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:05,780 [ scc.git] DEBUG Check current status 2025-06-16 09:25:05,780 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:05,783 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-06-16 09:25:05,783 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:05,829 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-16 09:25:05,833 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-16 09:25:05,841 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-06-16 09:25:05,846 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-16 09:25:05,850 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-06-16 09:25:05,853 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:06,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:06,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-06-16 09:25:06,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:06,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:07,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:07,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:07,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:07,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:08,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:08,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:08,253 [ scc.git] DEBUG Resetting... 2025-06-16 09:25:08,253 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-06-16 09:25:08,258 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-06-16 09:25:08,259 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-06-16 09:25:08,318 [ scc.git] DEBUG Check current status 2025-06-16 09:25:08,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:08,320 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-06-16 09:25:08,321 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:08,362 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-16 09:25:08,366 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-16 09:25:08,375 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-06-16 09:25:08,379 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-16 09:25:08,384 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-06-16 09:25:08,384 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-06-16 09:25:08,384 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-06-16 09:25:08,385 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-06-16 09:25:08,385 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-06-16 09:25:08,385 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-06-16 09:25:08,385 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:25:08,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:08,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-06-16 09:25:09,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:09,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/322 HTTP/1.1" 200 None 2025-06-16 09:25:09,310 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-16 09:25:09,310 [ scc.repo] DEBUG - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`' 2025-06-16 09:25:09,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:09,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None 2025-06-16 09:25:09,819 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-16 09:25:09,819 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-16 09:25:09,819 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:25:09,819 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:09,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:09,822 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-16 09:25:09,824 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:25:09,824 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-16 09:25:09,827 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-16 09:25:09,830 [ scc.git] DEBUG Already up to date. 2025-06-16 09:25:09,830 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head' 2025-06-16 09:25:10,150 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-16 09:25:10,150 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD 2025-06-16 09:25:10,156 [ scc.git] DEBUG Calling 'git fetch origin pull/322/head' 2025-06-16 09:25:10,463 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-16 09:25:10,464 [ scc.git] DEBUG * branch refs/pull/322/head -> FETCH_HEAD 2025-06-16 09:25:10,470 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:25:10,470 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:10,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:10,473 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-16 09:25:10,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:10,478 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-16 09:25:10,487 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:25:10,490 [ scc.git] DEBUG omero-web | 2 +- 2025-06-16 09:25:10,490 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-16 09:25:10,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:10,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:10,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...026772861d363d931c7907b901be2c3a48401cf0' 2025-06-16 09:25:10,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:10,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 322 (Bump omero-py from `e485be4` to `58ff255`) 026772861d363d931c7907b901be2c3a48401cf0' 2025-06-16 09:25:10,672 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:25:10,675 [ scc.git] DEBUG omero-py | 2 +- 2025-06-16 09:25:10,675 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-16 09:25:10,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:11,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:11,075 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:25:11,139 [ scc.git] DEBUG Submodule path 'omero-py': checked out '58ff255d01a78a01f22fd905829c25bfb1a0fbe7' 2025-06-16 09:25:11,163 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c1b8fefc872c1cadf5daba9476b405c59016abd5' 2025-06-16 09:25:11,164 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:11,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:11,166 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:25:11,199 [ scc.git] DEBUG has no local changes 2025-06-16 09:25:11,199 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:25:11,230 [ scc.git] DEBUG [detached HEAD e0ab4ce] merge master -Dorg -Snone 2025-06-16 09:25:11,230 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-06-16 09:25:11,230 [ scc.merge] INFO Already up to date. 2025-06-16 09:25:11,230 [ scc.merge] INFO 2025-06-16 09:25:11,230 [ scc.merge] INFO Merged PRs: 2025-06-16 09:25:11,230 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-16 09:25:11,230 [ scc.merge] INFO - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`' 2025-06-16 09:25:11,230 [ scc.merge] INFO 2025-06-16 09:25:11,230 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-06-16 09:25:11,230 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Submodule path 'omero-py': checked out '1d15ade091e1787e746170c70fb233b58c59737b' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-06-16 09:25:13,254 [ scc.config] DEBUG Found github.token 2025-06-16 09:25:13,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:13,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:13,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:13,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:14,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:14,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-06-16 09:25:14,259 [ scc.gh] DEBUG 3764 remaining from 5000 (Reset at 09:06 2025-06-16 09:25:14,260 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:14,262 [ scc.git] DEBUG Check current status 2025-06-16 09:25:14,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:14,265 [ scc.git] DEBUG e0ab4ce merge master -Dorg -Snone 2025-06-16 09:25:14,265 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:14,308 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-16 09:25:14,312 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-16 09:25:14,317 [ scc.git] DEBUG +1d15ade091e1787e746170c70fb233b58c59737b omero-py (v5.21.0-1-g1d15ade0) 2025-06-16 09:25:14,321 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-16 09:25:14,326 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8) 2025-06-16 09:25:14,329 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:14,329 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-06-16 09:25:14,330 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-06-16 09:25:14,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:14,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-06-16 09:25:15,016 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:15,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:15,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:15,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:15,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:16,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:16,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:16,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:16,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:16,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-06-16 09:25:16,617 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:16,619 [ scc.git] DEBUG Check current status 2025-06-16 09:25:16,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:16,622 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-06-16 09:25:16,622 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:16,663 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:16,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:17,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-06-16 09:25:17,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:17,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:17,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:18,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:18,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:18,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:18,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:18,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:18,946 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:18,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:18,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-06-16 09:25:18,988 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:18,990 [ scc.git] DEBUG Check current status 2025-06-16 09:25:18,990 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:18,993 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-06-16 09:25:18,994 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:19,036 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:19,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:19,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-06-16 09:25:19,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:19,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:20,213 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:20,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:20,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:20,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:21,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:21,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:21,267 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:21,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:21,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-06-16 09:25:21,309 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:21,312 [ scc.git] DEBUG Check current status 2025-06-16 09:25:21,312 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:21,314 [ scc.git] DEBUG 1d15ade0 Bump version: 5.21.0 → 5.21.1.dev0 2025-06-16 09:25:21,315 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:21,356 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:21,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:21,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-06-16 09:25:22,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:22,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:22,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:22,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:23,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:23,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:23,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:23,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:23,642 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:23,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:23,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-06-16 09:25:23,684 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:23,686 [ scc.git] DEBUG Check current status 2025-06-16 09:25:23,686 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:23,689 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-06-16 09:25:23,689 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:23,731 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:23,731 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-06-16 09:25:23,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:24,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-06-16 09:25:24,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:24,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:24,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:25,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:25,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:25,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:25,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:25,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:25,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:26,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:26,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-06-16 09:25:26,025 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-06-16 09:25:26,027 [ scc.git] DEBUG Check current status 2025-06-16 09:25:26,027 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:26,030 [ scc.git] DEBUG c1b8fefc8 Merge pull request #606 from knabar/fix-large-channel-count 2025-06-16 09:25:26,031 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:26,072 [ scc.config] DEBUG Found remote.origin.url 2025-06-16 09:25:26,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:26,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-06-16 09:25:26,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:26,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-06-16 09:25:27,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:27,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-06-16 09:25:27,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:27,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-06-16 09:25:28,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:28,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-06-16 09:25:28,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:28,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:28,352 [ scc.git] DEBUG Resetting... 2025-06-16 09:25:28,352 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-06-16 09:25:28,357 [ scc.git] DEBUG HEAD is now at e0ab4ce merge master -Dorg -Snone 2025-06-16 09:25:28,358 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-06-16 09:25:28,418 [ scc.git] DEBUG Submodule path 'omero-py': checked out '58ff255d01a78a01f22fd905829c25bfb1a0fbe7' 2025-06-16 09:25:28,428 [ scc.git] DEBUG Check current status 2025-06-16 09:25:28,428 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-06-16 09:25:28,430 [ scc.git] DEBUG e0ab4ce merge master -Dorg -Snone 2025-06-16 09:25:28,431 [ scc.git] DEBUG Calling 'git submodule status' 2025-06-16 09:25:28,472 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-06-16 09:25:28,476 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-06-16 09:25:28,485 [ scc.git] DEBUG 58ff255d01a78a01f22fd905829c25bfb1a0fbe7 omero-py (v5.20.0-24-g58ff255d) 2025-06-16 09:25:28,489 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-06-16 09:25:28,493 [ scc.git] DEBUG c1b8fefc872c1cadf5daba9476b405c59016abd5 omero-web (v5.29.0-5-gc1b8fefc8) 2025-06-16 09:25:28,494 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-06-16 09:25:28,495 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-06-16 09:25:28,495 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-06-16 09:25:28,495 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-06-16 09:25:28,495 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-06-16 09:25:28,495 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-06-16 09:25:28,495 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:25:28,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:28,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-06-16 09:25:29,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:29,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/322 HTTP/1.1" 200 None 2025-06-16 09:25:29,378 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-16 09:25:29,629 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:30,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/026772861d363d931c7907b901be2c3a48401cf0 HTTP/1.1" 200 None 2025-06-16 09:25:30,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:30,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/026772861d363d931c7907b901be2c3a48401cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:30,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:31,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/026772861d363d931c7907b901be2c3a48401cf0 HTTP/1.1" 200 None 2025-06-16 09:25:31,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:31,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/026772861d363d931c7907b901be2c3a48401cf0?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:25:31,530 [ scc.repo] DEBUG - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`' 2025-06-16 09:25:31,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:32,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/320 HTTP/1.1" 200 None 2025-06-16 09:25:32,053 [ scc.repo] DEBUG # ... Include label: dependencies 2025-06-16 09:25:32,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:32,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None 2025-06-16 09:25:32,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:33,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:33,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:33,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/1a784439f1291b60e07536b5e1fccabf5d90baa1 HTTP/1.1" 200 None 2025-06-16 09:25:33,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:34,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/1a784439f1291b60e07536b5e1fccabf5d90baa1?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:25:34,024 [ scc.repo] DEBUG - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-16 09:25:34,024 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:25:34,024 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:34,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:34,027 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-16 09:25:34,029 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:25:34,029 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-16 09:25:34,032 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-16 09:25:34,035 [ scc.git] DEBUG Already up to date. 2025-06-16 09:25:34,035 [ scc.git] DEBUG Calling 'git fetch origin pull/320/head' 2025-06-16 09:25:34,332 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-16 09:25:34,332 [ scc.git] DEBUG * branch refs/pull/320/head -> FETCH_HEAD 2025-06-16 09:25:34,339 [ scc.git] DEBUG Calling 'git fetch origin pull/322/head' 2025-06-16 09:25:34,619 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-06-16 09:25:34,619 [ scc.git] DEBUG * branch refs/pull/322/head -> FETCH_HEAD 2025-06-16 09:25:34,625 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:25:34,625 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:34,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:34,628 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-16 09:25:34,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:34,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 320 (Bump omero-web from `4b979f8` to `c1b8fef`) 1a784439f1291b60e07536b5e1fccabf5d90baa1' 2025-06-16 09:25:34,636 [ scc.git] DEBUG Already up to date. 2025-06-16 09:25:34,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:34,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:34,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...026772861d363d931c7907b901be2c3a48401cf0' 2025-06-16 09:25:34,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:34,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 322 (Bump omero-py from `e485be4` to `58ff255`) 026772861d363d931c7907b901be2c3a48401cf0' 2025-06-16 09:25:34,825 [ scc.git] DEBUG Already up to date. 2025-06-16 09:25:35,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:35,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:35,229 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:25:35,272 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:35,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:35,275 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:25:35,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:35,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-06-16 09:25:36,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:36,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-06-16 09:25:36,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:36,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-06-16 09:25:37,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:37,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-06-16 09:25:37,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:37,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:38,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:38,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-06-16 09:25:38,682 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:38,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:25:38,885 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-06-16 09:25:38,885 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:25:38,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-06-16 09:25:38,885 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:38,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:38,889 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-16 09:25:38,891 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:25:38,891 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-16 09:25:38,894 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-16 09:25:38,897 [ scc.git] DEBUG Already up to date. 2025-06-16 09:25:38,898 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-06-16 09:25:39,202 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-06-16 09:25:39,202 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-06-16 09:25:39,206 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:25:39,206 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:39,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:39,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-06-16 09:25:39,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:39,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-06-16 09:25:39,226 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-06-16 09:25:39,227 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-06-16 09:25:39,228 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-06-16 09:25:39,232 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-06-16 09:25:39,232 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-06-16 09:25:39,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:39,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:39,390 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:25:39,431 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:39,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:39,433 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:39,472 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:25:39,476 [ scc.git] DEBUG has no local changes 2025-06-16 09:25:39,476 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:25:39,483 [ scc.git] DEBUG [detached HEAD 34a7be9] merge master -Dorg -Ssuccess-only 2025-06-16 09:25:39,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:39,483 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:25:39,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:40,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-06-16 09:25:40,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:40,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-06-16 09:25:40,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:40,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-06-16 09:25:41,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:41,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-06-16 09:25:41,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:41,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-06-16 09:25:42,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:42,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-06-16 09:25:42,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:43,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:43,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:43,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-06-16 09:25:43,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:43,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:25:43,923 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-06-16 09:25:44,174 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:44,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-06-16 09:25:44,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:44,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-06-16 09:25:45,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:45,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-06-16 09:25:45,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:45,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-06-16 09:25:45,899 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:25:45,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-06-16 09:25:45,899 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:45,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:45,902 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-16 09:25:45,904 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:25:45,904 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-16 09:25:45,907 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-16 09:25:45,910 [ scc.git] DEBUG Already up to date. 2025-06-16 09:25:45,911 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-06-16 09:25:46,270 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-06-16 09:25:46,271 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-06-16 09:25:46,275 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:25:46,275 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:46,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:46,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-06-16 09:25:46,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:46,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-06-16 09:25:46,294 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-06-16 09:25:46,295 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:25:46,298 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-06-16 09:25:46,298 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-06-16 09:25:46,299 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-06-16 09:25:46,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:46,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:25:46,478 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:25:46,518 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:25:46,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:25:46,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:25:46,558 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:25:46,562 [ scc.git] DEBUG has no local changes 2025-06-16 09:25:46,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:25:46,569 [ scc.git] DEBUG [detached HEAD b48e667] merge master -Dorg -Ssuccess-only 2025-06-16 09:25:46,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:25:46,569 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:25:46,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:47,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-06-16 09:25:47,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:47,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-06-16 09:25:47,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:48,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-06-16 09:25:48,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:48,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-06-16 09:25:48,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:49,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-06-16 09:25:49,315 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:49,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-06-16 09:25:49,593 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-06-16 09:25:49,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:50,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-06-16 09:25:50,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:50,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-06-16 09:25:50,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:51,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-06-16 09:25:51,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:51,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:51,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:52,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-06-16 09:25:52,374 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:52,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:25:52,558 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-06-16 09:25:52,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:53,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-06-16 09:25:53,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:53,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-06-16 09:25:53,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:54,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-06-16 09:25:54,334 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:54,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:54,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:55,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:25:55,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:55,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-06-16 09:25:55,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:56,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-06-16 09:25:56,290 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:56,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-06-16 09:25:56,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:57,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:25:57,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:57,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-06-16 09:25:57,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:57,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:25:57,945 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-06-16 09:25:58,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:58,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-06-16 09:25:58,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:58,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-06-16 09:25:59,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:59,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-06-16 09:25:59,717 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:25:59,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:00,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:00,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-06-16 09:26:00,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:00,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:26:00,919 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-06-16 09:26:01,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:01,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-06-16 09:26:01,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:01,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-06-16 09:26:02,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:02,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-06-16 09:26:02,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:02,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-06-16 09:26:03,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:03,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-06-16 09:26:03,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:04,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:04,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:04,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-06-16 09:26:04,916 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:05,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:26:05,153 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-06-16 09:26:05,154 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:26:05,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-06-16 09:26:05,154 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:26:05,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:05,156 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-16 09:26:05,159 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:26:05,159 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-16 09:26:05,162 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-16 09:26:05,172 [ scc.git] DEBUG Updating 58ff255d..1d15ade0 2025-06-16 09:26:05,172 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-06-16 09:26:05,505 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-16 09:26:05,505 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-06-16 09:26:05,510 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-06-16 09:26:05,817 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-16 09:26:05,817 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-06-16 09:26:05,822 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-06-16 09:26:06,130 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-16 09:26:06,130 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-06-16 09:26:06,135 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-06-16 09:26:06,415 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-06-16 09:26:06,415 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-06-16 09:26:06,420 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:26:06,420 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:26:06,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:06,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-06-16 09:26:06,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:06,438 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-06-16 09:26:06,463 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-06-16 09:26:06,463 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-06-16 09:26:06,464 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:26:06,468 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-06-16 09:26:06,468 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-06-16 09:26:06,468 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-06-16 09:26:06,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:06,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:06,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-06-16 09:26:06,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:06,660 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-06-16 09:26:06,681 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:26:06,684 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-06-16 09:26:06,685 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-06-16 09:26:06,685 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-06-16 09:26:06,685 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-06-16 09:26:06,685 [ scc.git] DEBUG create mode 100644 connect.py 2025-06-16 09:26:06,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:07,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:07,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-06-16 09:26:07,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:07,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-06-16 09:26:07,099 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-06-16 09:26:07,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:26:07,104 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-06-16 09:26:07,104 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-06-16 09:26:07,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:07,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:07,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-06-16 09:26:07,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:07,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-06-16 09:26:07,535 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-06-16 09:26:07,537 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:26:07,544 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-06-16 09:26:07,544 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-06-16 09:26:07,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:07,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:07,908 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:26:07,950 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:26:07,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:07,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:26:07,994 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:26:08,001 [ scc.git] DEBUG has no local changes 2025-06-16 09:26:08,002 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Updating 58ff255d..1d15ade0 Previously merged: Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:26:08,009 [ scc.git] DEBUG [detached HEAD f59807a0] merge master -Dorg -Ssuccess-only 2025-06-16 09:26:08,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:26:08,010 [ scc.git] INFO Overriding base-branch from master to develop 2025-06-16 09:26:08,010 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:26:08,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:08,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-06-16 09:26:08,815 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:09,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/227 HTTP/1.1" 200 None 2025-06-16 09:26:09,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:09,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/227/comments HTTP/1.1" 200 None 2025-06-16 09:26:09,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:10,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65 HTTP/1.1" 200 None 2025-06-16 09:26:10,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:10,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:10,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:11,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:11,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:11,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1f29df2ee64c201958e73f0d5a38c4c4a325bf65 HTTP/1.1" 200 None 2025-06-16 09:26:12,030 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:12,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1f29df2ee64c201958e73f0d5a38c4c4a325bf65?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:26:12,217 [ scc.repo] DEBUG - PR 227 jburel 'Replace tostring by tobytes' 2025-06-16 09:26:12,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:12,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-06-16 09:26:12,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:13,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-06-16 09:26:13,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:13,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-06-16 09:26:14,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:14,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:14,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:14,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:15,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:15,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-06-16 09:26:15,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:15,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:26:15,859 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-06-16 09:26:16,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:16,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-06-16 09:26:16,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:16,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-06-16 09:26:17,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:17,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-06-16 09:26:17,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:17,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:18,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:18,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-06-16 09:26:18,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:18,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:26:18,747 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-06-16 09:26:18,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:19,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-06-16 09:26:19,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:19,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-06-16 09:26:20,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:20,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-06-16 09:26:20,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:20,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-06-16 09:26:20,903 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:26:20,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-06-16 09:26:20,903 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:26:20,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:20,906 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-06-16 09:26:20,909 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:26:20,909 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-06-16 09:26:20,912 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-06-16 09:26:20,915 [ scc.git] DEBUG Already up to date. 2025-06-16 09:26:20,915 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-06-16 09:26:21,242 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-06-16 09:26:21,242 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-06-16 09:26:21,246 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-06-16 09:26:21,523 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-06-16 09:26:21,524 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-06-16 09:26:21,528 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head' 2025-06-16 09:26:21,787 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-06-16 09:26:21,787 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD 2025-06-16 09:26:21,792 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:26:21,792 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:26:21,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:21,794 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-06-16 09:26:21,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:21,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-06-16 09:26:21,812 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-06-16 09:26:21,813 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-06-16 09:26:21,813 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-06-16 09:26:21,816 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-06-16 09:26:21,821 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-06-16 09:26:21,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:22,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:22,010 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-06-16 09:26:22,015 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-06-16 09:26:22,019 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#438](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-06-16 09:26:22,021 [ scc.config] DEBUG Found github.token 2025-06-16 09:26:22,022 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-06-16 09:26:22,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-06-16 09:26:22,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:22,028 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-06-16 09:26:22,038 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:26:22,041 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-06-16 09:26:22,041 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-06-16 09:26:22,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:22,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:22,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f29df2ee64c201958e73f0d5a38c4c4a325bf65' 2025-06-16 09:26:22,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:22,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Replace tostring by tobytes) 1f29df2ee64c201958e73f0d5a38c4c4a325bf65' 2025-06-16 09:26:22,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:26:22,447 [ scc.git] DEBUG omero/export_scripts/Make_Movie.py | 2 +- 2025-06-16 09:26:22,448 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-16 09:26:22,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:22,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:26:22,847 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:26:22,889 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:26:22,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:26:22,892 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:26:22,932 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:26:22,936 [ scc.git] DEBUG has no local changes 2025-06-16 09:26:22,936 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 227 jburel 'Replace tostring by tobytes' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:26:22,944 [ scc.git] DEBUG [detached HEAD cce3ca0] merge master -Dorg -Ssuccess-only 2025-06-16 09:26:22,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:26:22,945 [ scc.repo] DEBUG ## PRs found: 2025-06-16 09:26:23,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:23,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-06-16 09:26:23,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:24,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/623 HTTP/1.1" 200 None 2025-06-16 09:26:24,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:24,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/623/comments HTTP/1.1" 200 None 2025-06-16 09:26:24,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:25,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None 2025-06-16 09:26:25,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:25,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:25,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:26,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:26,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:26,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None 2025-06-16 09:26:26,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:27,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/0343a1acda423eef3ca919c785761c5963a0b353?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:27,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:27,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353 HTTP/1.1" 200 None 2025-06-16 09:26:27,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:28,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/0343a1acda423eef3ca919c785761c5963a0b353/status HTTP/1.1" 200 None 2025-06-16 09:26:28,088 [ scc.repo] DEBUG - PR 623 jburel 'Replace fromstring by frombytes' 2025-06-16 09:26:28,339 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:28,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/621 HTTP/1.1" 200 None 2025-06-16 09:26:28,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:29,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None 2025-06-16 09:26:29,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:29,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:29,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:30,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:30,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:30,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None 2025-06-16 09:26:30,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:31,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f6b7dc5e59341f99678864923ba89565ce27956?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:31,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:31,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956 HTTP/1.1" 200 None 2025-06-16 09:26:31,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:32,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f6b7dc5e59341f99678864923ba89565ce27956/status HTTP/1.1" 200 None 2025-06-16 09:26:32,131 [ scc.repo] DEBUG - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' 2025-06-16 09:26:32,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:32,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-06-16 09:26:32,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:33,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-06-16 09:26:33,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:33,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:34,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:34,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:34,533 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:34,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-06-16 09:26:35,089 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:35,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:35,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:35,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-06-16 09:26:36,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:36,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-06-16 09:26:36,222 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-06-16 09:26:36,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:36,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-06-16 09:26:36,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:37,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-06-16 09:26:37,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:37,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-06-16 09:26:38,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:38,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:38,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:39,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:39,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:39,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-06-16 09:26:39,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:40,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:40,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:40,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-06-16 09:26:40,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:41,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-06-16 09:26:41,013 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-06-16 09:26:41,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:41,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-06-16 09:26:41,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:42,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-06-16 09:26:42,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:42,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-06-16 09:26:42,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:43,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:43,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:43,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:43,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:44,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-06-16 09:26:44,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:44,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:44,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:45,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-06-16 09:26:45,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:45,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-06-16 09:26:45,529 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-06-16 09:26:45,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:46,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-06-16 09:26:46,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:46,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-06-16 09:26:46,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:47,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-06-16 09:26:47,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:47,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:47,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:48,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:48,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-06-16 09:26:49,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:49,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:49,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:49,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-06-16 09:26:50,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:50,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-06-16 09:26:50,247 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-06-16 09:26:50,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:50,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-06-16 09:26:50,968 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:51,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-06-16 09:26:51,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:51,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-06-16 09:26:51,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:52,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:52,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:53,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:53,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-06-16 09:26:53,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:53,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:54,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:54,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-06-16 09:26:54,598 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:54,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-06-16 09:26:54,801 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-06-16 09:26:55,052 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:55,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-06-16 09:26:55,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:55,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-06-16 09:26:56,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:56,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-06-16 09:26:56,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:56,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:57,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:57,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:26:57,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:57,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-06-16 09:26:58,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:58,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:26:58,621 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:58,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-06-16 09:26:59,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:59,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-06-16 09:26:59,354 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-06-16 09:26:59,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:26:59,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-06-16 09:27:00,107 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:00,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-06-16 09:27:00,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:00,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:01,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:01,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:27:01,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:01,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-06-16 09:27:02,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:02,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:02,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:02,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-06-16 09:27:03,247 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:03,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-06-16 09:27:03,437 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-06-16 09:27:03,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:03,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-06-16 09:27:04,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:04,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-06-16 09:27:04,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:04,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-06-16 09:27:05,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:05,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:05,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:06,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:27:06,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:06,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-06-16 09:27:06,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:06,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:07,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:07,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-06-16 09:27:07,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:07,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-06-16 09:27:07,917 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-06-16 09:27:08,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:08,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-06-16 09:27:08,675 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:08,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-06-16 09:27:09,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:09,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-06-16 09:27:09,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:09,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:10,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:10,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:27:10,742 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:11,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-06-16 09:27:11,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:11,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:11,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:11,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-06-16 09:27:12,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:12,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-06-16 09:27:12,441 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-06-16 09:27:12,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:12,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-06-16 09:27:13,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:13,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-06-16 09:27:13,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:13,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-06-16 09:27:14,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:14,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-06-16 09:27:14,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:15,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-06-16 09:27:15,277 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:15,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:15,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:16,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-06-16 09:27:16,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:16,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:27:16,479 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-06-16 09:27:16,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:17,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-06-16 09:27:17,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:17,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-06-16 09:27:17,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:18,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-06-16 09:27:18,331 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:18,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:18,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:19,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-06-16 09:27:19,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:19,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-06-16 09:27:19,472 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-06-16 09:27:19,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:19,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-06-16 09:27:20,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:20,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-06-16 09:27:20,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:21,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-06-16 09:27:21,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:21,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-06-16 09:27:21,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:22,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-06-16 09:27:22,110 [ scc.repo] DEBUG ## Branches found: 2025-06-16 09:27:22,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-06-16 09:27:22,110 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:27:22,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:22,113 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-06-16 09:27:22,116 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-06-16 09:27:22,117 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-06-16 09:27:22,120 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-06-16 09:27:22,124 [ scc.git] DEBUG Already up to date. 2025-06-16 09:27:22,124 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-06-16 09:27:22,455 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:22,455 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-06-16 09:27:22,460 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-06-16 09:27:22,769 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:22,770 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-06-16 09:27:22,775 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-06-16 09:27:23,091 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:23,091 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-06-16 09:27:23,096 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-06-16 09:27:23,380 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:23,380 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-06-16 09:27:23,385 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-06-16 09:27:23,676 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:23,676 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-06-16 09:27:23,681 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-06-16 09:27:23,978 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:23,978 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-06-16 09:27:23,983 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-06-16 09:27:24,259 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:24,259 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-06-16 09:27:24,263 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-06-16 09:27:24,525 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:24,525 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-06-16 09:27:24,529 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-06-16 09:27:24,810 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:24,810 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-06-16 09:27:24,815 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-06-16 09:27:25,090 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:25,090 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-06-16 09:27:25,095 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-06-16 09:27:25,392 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:25,392 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-06-16 09:27:25,397 [ scc.git] DEBUG Calling 'git fetch origin pull/621/head' 2025-06-16 09:27:25,677 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:25,677 [ scc.git] DEBUG * branch refs/pull/621/head -> FETCH_HEAD 2025-06-16 09:27:25,682 [ scc.git] DEBUG Calling 'git fetch origin pull/623/head' 2025-06-16 09:27:25,958 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-06-16 09:27:25,958 [ scc.git] DEBUG * branch refs/pull/623/head -> FETCH_HEAD 2025-06-16 09:27:25,963 [ scc.git] DEBUG ## Unique users: [] 2025-06-16 09:27:25,963 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:27:25,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:25,966 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-06-16 09:27:25,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:25,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-06-16 09:27:25,998 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-06-16 09:27:25,998 [ scc.git] DEBUG Auto-merging setup.py 2025-06-16 09:27:26,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:26,004 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-06-16 09:27:26,004 [ scc.git] DEBUG setup.py | 1 + 2025-06-16 09:27:26,004 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-06-16 09:27:26,005 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:26,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:26,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-06-16 09:27:26,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:26,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-06-16 09:27:26,203 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-06-16 09:27:26,203 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-06-16 09:27:26,204 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:26,209 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-06-16 09:27:26,209 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-06-16 09:27:26,209 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-06-16 09:27:26,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:26,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:26,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-06-16 09:27:26,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:26,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-06-16 09:27:26,624 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:26,628 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-06-16 09:27:26,628 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-16 09:27:26,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:27,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:27,015 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-06-16 09:27:27,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:27,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-06-16 09:27:27,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:27,049 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-06-16 09:27:27,049 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-06-16 09:27:27,266 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:27,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:27,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-06-16 09:27:27,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:27,471 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-06-16 09:27:27,492 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:27,497 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-06-16 09:27:27,497 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-06-16 09:27:27,497 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-06-16 09:27:27,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:27,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:27,887 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-06-16 09:27:27,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:27,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-06-16 09:27:27,926 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-06-16 09:27:27,927 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:27,934 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-06-16 09:27:27,934 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-06-16 09:27:27,934 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-06-16 09:27:27,934 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-06-16 09:27:28,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:28,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:28,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-06-16 09:27:28,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:28,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-06-16 09:27:28,333 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:28,337 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-06-16 09:27:28,338 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-06-16 09:27:28,338 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-06-16 09:27:28,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:28,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:28,722 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-06-16 09:27:28,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:28,734 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-06-16 09:27:28,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:28,761 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-06-16 09:27:28,761 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-06-16 09:27:28,761 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-06-16 09:27:28,761 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-06-16 09:27:28,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:29,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:29,164 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-06-16 09:27:29,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:29,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-06-16 09:27:29,194 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:29,198 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-06-16 09:27:29,198 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-06-16 09:27:29,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:29,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:29,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-06-16 09:27:29,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:29,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-06-16 09:27:29,619 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:29,622 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-06-16 09:27:29,622 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-16 09:27:29,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:30,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:30,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-06-16 09:27:30,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:30,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-06-16 09:27:30,033 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-06-16 09:27:30,034 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:30,038 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-06-16 09:27:30,038 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-06-16 09:27:30,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:30,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:30,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f6b7dc5e59341f99678864923ba89565ce27956' 2025-06-16 09:27:30,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:30,438 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 621 (/webgateway/original_file_paths: handle images without Fileset) 1f6b7dc5e59341f99678864923ba89565ce27956' 2025-06-16 09:27:30,458 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:30,462 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 ++ 2025-06-16 09:27:30,462 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2025-06-16 09:27:30,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:30,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:30,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0343a1acda423eef3ca919c785761c5963a0b353' 2025-06-16 09:27:30,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:30,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 623 (Replace fromstring by frombytes) 0343a1acda423eef3ca919c785761c5963a0b353' 2025-06-16 09:27:30,881 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py 2025-06-16 09:27:30,883 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-06-16 09:27:30,888 [ scc.git] DEBUG omeroweb/webgateway/views.py | 2 +- 2025-06-16 09:27:30,888 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-06-16 09:27:31,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:31,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:31,261 [ scc.git] DEBUG Calling 'git submodule update' 2025-06-16 09:27:31,301 [ scc.git] DEBUG Get sha1 of %s 2025-06-16 09:27:31,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-06-16 09:27:31,304 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:27:31,343 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:27:31,352 [ scc.git] DEBUG has no local changes 2025-06-16 09:27:31,352 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' - PR 623 jburel 'Replace fromstring by frombytes' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:27:31,362 [ scc.git] DEBUG [detached HEAD c87035af1] merge master -Dorg -Ssuccess-only 2025-06-16 09:27:31,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:27:31,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-06-16 09:27:31,412 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-06-16 09:27:31,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:31,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:31,687 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-06-16 09:27:31,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:32,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:32,099 [ scc.config] DEBUG Found submodule.omero-py.url 2025-06-16 09:27:32,343 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:32,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:32,526 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-06-16 09:27:32,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:32,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:32,947 [ scc.config] DEBUG Found submodule.omero-web.url 2025-06-16 09:27:33,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-06-16 09:27:33,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-06-16 09:27:33,396 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-06-16 09:27:33,424 [ scc.git] DEBUG has local changes 2025-06-16 09:27:33,424 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Updating 58ff255d..1d15ade0 Previously merged: Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 227 jburel 'Replace tostring by tobytes' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' - PR 623 jburel 'Replace fromstring by frombytes' Generated by OMERO-python-superbuild-push#438 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/438/)' 2025-06-16 09:27:33,433 [ scc.git] DEBUG [detached HEAD 1baf8aa] merge master -Dorg -Ssuccess-only 2025-06-16 09:27:33,433 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-06-16 09:27:33,433 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-06-16 09:27:33,433 [ scc.merge] INFO Already up to date. 2025-06-16 09:27:33,433 [ scc.merge] INFO 2025-06-16 09:27:33,433 [ scc.merge] INFO Merged PRs: 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 320 dependabot[bot] 'Bump omero-web from `4b979f8` to `c1b8fef`' 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 322 dependabot[bot] 'Bump omero-py from `e485be4` to `58ff255`' 2025-06-16 09:27:33,433 [ scc.merge] INFO 2025-06-16 09:27:33,433 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-06-16 09:27:33,433 [ scc.merge] INFO Already up to date. 2025-06-16 09:27:33,433 [ scc.merge] INFO 2025-06-16 09:27:33,433 [ scc.merge] INFO Merged PRs: 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-06-16 09:27:33,433 [ scc.merge] INFO 2025-06-16 09:27:33,433 [ scc.merge] INFO Repository: ome/omero-marshal 2025-06-16 09:27:33,433 [ scc.merge] INFO Excluded PRs: 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-06-16 09:27:33,433 [ scc.merge] INFO Already up to date. 2025-06-16 09:27:33,433 [ scc.merge] INFO 2025-06-16 09:27:33,433 [ scc.merge] INFO Merged PRs: 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-06-16 09:27:33,433 [ scc.merge] INFO 2025-06-16 09:27:33,433 [ scc.merge] INFO Repository: ome/omero-py 2025-06-16 09:27:33,433 [ scc.merge] INFO Excluded PRs: 2025-06-16 09:27:33,433 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-06-16 09:27:33,434 [ scc.merge] INFO Updating 58ff255d..1d15ade0 2025-06-16 09:27:33,434 [ scc.merge] INFO Previously merged: 2025-06-16 09:27:33,434 [ scc.merge] INFO 2025-06-16 09:27:33,434 [ scc.merge] INFO Merged PRs: 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-06-16 09:27:33,434 [ scc.merge] INFO 2025-06-16 09:27:33,434 [ scc.merge] INFO Repository: ome/omero-scripts 2025-06-16 09:27:33,434 [ scc.merge] INFO Excluded PRs: 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-06-16 09:27:33,434 [ scc.merge] INFO Already up to date. 2025-06-16 09:27:33,434 [ scc.merge] INFO 2025-06-16 09:27:33,434 [ scc.merge] INFO Merged PRs: 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2025-06-16 09:27:33,434 [ scc.merge] INFO 2025-06-16 09:27:33,434 [ scc.merge] INFO Conflicting PRs (not included): 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-06-16 09:27:33,434 [ scc.merge] INFO 2025-06-16 09:27:33,434 [ scc.merge] INFO Repository: ome/omero-web 2025-06-16 09:27:33,434 [ scc.merge] INFO Excluded PRs: 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-06-16 09:27:33,434 [ scc.merge] INFO Already up to date. 2025-06-16 09:27:33,434 [ scc.merge] INFO 2025-06-16 09:27:33,434 [ scc.merge] INFO Merged PRs: 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-06-16 09:27:33,434 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 621 sbesson '/webgateway/original_file_paths: handle images without Fileset' 2025-06-16 09:27:33,435 [ scc.merge] INFO - PR 623 jburel 'Replace fromstring by frombytes' 2025-06-16 09:27:33,435 [ scc.merge] INFO 2025-06-16 09:27:33,435 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-06-16 09:27:33,435 [ scc.git] DEBUG Calling 'git remote' 2025-06-16 09:27:33,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-06-16 09:27:33,437 [ scc.git] DEBUG Calling 'git remote' 2025-06-16 09:27:33,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:27:33,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-06-16 09:27:33,439 [ scc.git] DEBUG Calling 'git remote' 2025-06-16 09:27:33,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:27:33,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-06-16 09:27:33,442 [ scc.git] DEBUG Calling 'git remote' 2025-06-16 09:27:33,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:27:33,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-06-16 09:27:33,444 [ scc.git] DEBUG Calling 'git remote' 2025-06-16 09:27:33,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-06-16 09:27:33,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-06-16 09:27:33,446 [ scc.git] DEBUG Calling 'git remote' 2025-06-16 09:27:33,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 58ff255d nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from c1b8fefc8 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-06-16 09:28:02,473 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS