Started by upstream project "Trigger" build number 531
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
Commit message: "Merge pull request #18 from jburel/python_311"
> git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
Checking out Revision 275cf49111cab67b32c61ae880152ce050cecf83 (refs/remotes/origin/master)
Commit message: "Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd"
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
> git --version # timeout=10
> git --version # 'git version 2.43.5'
> git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 275cf49111cab67b32c61ae880152ce050cecf83 # timeout=10
> git rev-list --no-walk 275cf49111cab67b32c61ae880152ce050cecf83 # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-py.url # timeout=10
> git config -f .gitmodules --get submodule.omero-py.path # timeout=10
> git config --get submodule.omero-web.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web.path # timeout=10
> git config --get submodule.omero-marshal.url # timeout=10
> git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
> git config --get submodule.omero-dropbox.url # timeout=10
> git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
> git config --get submodule.omero-scripts.url # timeout=10
> git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
> git submodule update --init --recursive omero-py # timeout=10
> git submodule update --init --recursive omero-web # timeout=10
> git submodule update --init --recursive omero-marshal # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 469
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3.11 -m venv build/venv
> git submodule update --init --recursive omero-dropbox # timeout=10
> git submodule update --init --recursive omero-scripts # timeout=10
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ python3.11 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1)
Collecting pip
Using cached pip-25.1.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 22.3.1
Uninstalling pip-22.3.1:
Successfully uninstalled pip-22.3.1
Successfully installed pip-25.1.1
+ python3.11 -m pip install scc
Collecting scc
Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.14-py3-none-any.whl.metadata (24 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.32.4-py3-none-any.whl.metadata (4.9 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.14.0-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-45.0.4-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB)
Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2025.6.15-py3-none-any.whl.metadata (2.4 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB)
Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB)
Using cached cryptography-45.0.4-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB)
Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
Using cached requests-2.32.4-py3-none-any.whl (64 kB)
Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached certifi-2025.6.15-py3-none-any.whl (157 kB)
Using cached typing_extensions-4.14.0-py3-none-any.whl (43 kB)
Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB)
Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Using cached ruamel.yaml-0.18.14-py3-none-any.whl (118 kB)
Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.6.15 cffi-1.17.1 charset_normalizer-3.4.2 cryptography-45.0.4 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.4 ruamel.yaml-0.18.14 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.14.0 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-06-22 00:19:11,429 [ scc.config] DEBUG Found github.token
2025-06-22 00:19:11,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:11,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:11,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:12,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:12,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:12,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-22 00:19:12,469 [ scc.gh] DEBUG 4373 remaining from 5000 (Reset at 00:06
2025-06-22 00:19:12,470 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:12,472 [ scc.git] DEBUG Check current status
2025-06-22 00:19:12,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:12,475 [ scc.git] DEBUG 275cf49 Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd
2025-06-22 00:19:12,475 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:12,518 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-22 00:19:12,522 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-22 00:19:12,527 [ scc.git] DEBUG 973b6bd7b4cb0fc1f06e3462a739b654390a2f60 omero-py (v5.21.0-3-g973b6bd7)
2025-06-22 00:19:12,531 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-06-22 00:19:12,537 [ scc.git] DEBUG d5facbbcfa196ac37307a6e4b67cbc606b9b0908 omero-web (v5.29.0-17-gd5facbbcf)
2025-06-22 00:19:12,540 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:12,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:12,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-22 00:19:13,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:13,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:13,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:13,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:14,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:14,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:14,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:14,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:14,814 [ scc.git] DEBUG Resetting...
2025-06-22 00:19:14,814 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-22 00:19:14,819 [ scc.git] DEBUG HEAD is now at 275cf49 Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd
2025-06-22 00:19:14,819 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-22 00:19:14,877 [ scc.git] DEBUG Check current status
2025-06-22 00:19:14,877 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:14,880 [ scc.git] DEBUG 275cf49 Merge pull request #325 from ome/dependabot/submodules/omero-py-973b6bd
2025-06-22 00:19:14,880 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:14,923 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-22 00:19:14,926 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-22 00:19:14,931 [ scc.git] DEBUG 973b6bd7b4cb0fc1f06e3462a739b654390a2f60 omero-py (v5.21.0-3-g973b6bd7)
2025-06-22 00:19:14,935 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-06-22 00:19:14,941 [ scc.git] DEBUG d5facbbcfa196ac37307a6e4b67cbc606b9b0908 omero-web (v5.29.0-17-gd5facbbcf)
2025-06-22 00:19:14,942 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-22 00:19:14,942 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-22 00:19:14,942 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-22 00:19:14,942 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-22 00:19:14,942 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-22 00:19:14,942 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:19:15,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:15,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-22 00:19:15,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:15,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/327 HTTP/1.1" 200 None
2025-06-22 00:19:15,795 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-22 00:19:15,795 [ scc.repo] DEBUG - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`'
2025-06-22 00:19:15,795 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:19:15,795 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:15,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:15,798 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-22 00:19:15,800 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:19:15,800 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-22 00:19:15,803 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-22 00:19:15,806 [ scc.git] DEBUG Already up to date.
2025-06-22 00:19:15,806 [ scc.git] DEBUG Calling 'git fetch origin pull/327/head'
2025-06-22 00:19:16,112 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-22 00:19:16,112 [ scc.git] DEBUG * branch refs/pull/327/head -> FETCH_HEAD
2025-06-22 00:19:16,119 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:19:16,119 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:16,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:16,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...acd6c212282fc45a288c662b1077df0abf25ea06'
2025-06-22 00:19:16,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:16,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 327 (Bump omero-web from `d5facbb` to `c275264`) acd6c212282fc45a288c662b1077df0abf25ea06'
2025-06-22 00:19:16,136 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:19:16,139 [ scc.git] DEBUG omero-web | 2 +-
2025-06-22 00:19:16,139 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-22 00:19:16,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:16,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:16,299 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:19:16,364 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'c2752646d865e17976dcd2582cefb18fc5c4c0fc'
2025-06-22 00:19:16,364 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:16,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:16,367 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:19:16,398 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc4da09e6d0> has no local changes
2025-06-22 00:19:16,398 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:19:16,424 [ scc.git] DEBUG [detached HEAD cfc2f41] merge master -Dorg -Snone
2025-06-22 00:19:16,424 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-22 00:19:16,424 [ scc.merge] INFO Already up to date.
2025-06-22 00:19:16,424 [ scc.merge] INFO
2025-06-22 00:19:16,424 [ scc.merge] INFO Merged PRs:
2025-06-22 00:19:16,424 [ scc.merge] INFO - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`'
2025-06-22 00:19:16,424 [ scc.merge] INFO
2025-06-22 00:19:16,424 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-22 00:19:16,424 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-22 00:19:18,431 [ scc.config] DEBUG Found github.token
2025-06-22 00:19:18,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:18,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:18,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:19,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:19,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:19,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-06-22 00:19:19,418 [ scc.gh] DEBUG 4363 remaining from 5000 (Reset at 00:06
2025-06-22 00:19:19,419 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:19,421 [ scc.git] DEBUG Check current status
2025-06-22 00:19:19,421 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:19,424 [ scc.git] DEBUG cfc2f41 merge master -Dorg -Snone
2025-06-22 00:19:19,424 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:19,467 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-22 00:19:19,471 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-22 00:19:19,476 [ scc.git] DEBUG 973b6bd7b4cb0fc1f06e3462a739b654390a2f60 omero-py (v5.21.0-3-g973b6bd7)
2025-06-22 00:19:19,480 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-06-22 00:19:19,485 [ scc.git] DEBUG c2752646d865e17976dcd2582cefb18fc5c4c0fc omero-web (v5.29.1-1-gc2752646d)
2025-06-22 00:19:19,488 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:19,488 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-06-22 00:19:19,489 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-06-22 00:19:19,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:19,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-06-22 00:19:20,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:20,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:20,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:20,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:21,074 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:21,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:21,515 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:21,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:21,692 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:21,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-22 00:19:21,742 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:21,745 [ scc.git] DEBUG Check current status
2025-06-22 00:19:21,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:21,747 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-06-22 00:19:21,748 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:21,791 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:21,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:22,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-06-22 00:19:22,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:22,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:22,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:23,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:23,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:23,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:23,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:23,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:23,978 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:24,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:24,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-22 00:19:24,020 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:24,023 [ scc.git] DEBUG Check current status
2025-06-22 00:19:24,023 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:24,026 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-06-22 00:19:24,026 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:24,069 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:24,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:24,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-06-22 00:19:24,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:24,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:25,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:25,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:25,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:25,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:26,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:26,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:26,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:26,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:26,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-22 00:19:26,342 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:26,344 [ scc.git] DEBUG Check current status
2025-06-22 00:19:26,344 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:26,347 [ scc.git] DEBUG 973b6bd7 Merge pull request #462 from jburel/windows_action
2025-06-22 00:19:26,347 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:26,390 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:26,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:26,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-06-22 00:19:27,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:27,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:27,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:27,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:27,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:28,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:28,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:28,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:28,643 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:28,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:28,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-22 00:19:28,686 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:28,688 [ scc.git] DEBUG Check current status
2025-06-22 00:19:28,688 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:28,691 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-06-22 00:19:28,691 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:28,734 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:28,734 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-06-22 00:19:28,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:29,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-06-22 00:19:29,398 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:29,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:29,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:30,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:30,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:30,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:30,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:30,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:30,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:30,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:30,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-22 00:19:30,952 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-06-22 00:19:30,954 [ scc.git] DEBUG Check current status
2025-06-22 00:19:30,954 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:30,957 [ scc.git] DEBUG c2752646d Bump version: 5.29.1 → 5.29.2.dev0
2025-06-22 00:19:30,957 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:30,999 [ scc.config] DEBUG Found remote.origin.url
2025-06-22 00:19:31,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:31,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-06-22 00:19:31,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:31,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-06-22 00:19:32,149 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:32,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-06-22 00:19:32,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:32,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-06-22 00:19:33,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:33,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-06-22 00:19:33,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:33,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:33,237 [ scc.git] DEBUG Resetting...
2025-06-22 00:19:33,237 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-06-22 00:19:33,241 [ scc.git] DEBUG HEAD is now at cfc2f41 merge master -Dorg -Snone
2025-06-22 00:19:33,242 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-06-22 00:19:33,297 [ scc.git] DEBUG Check current status
2025-06-22 00:19:33,297 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-06-22 00:19:33,299 [ scc.git] DEBUG cfc2f41 merge master -Dorg -Snone
2025-06-22 00:19:33,300 [ scc.git] DEBUG Calling 'git submodule status'
2025-06-22 00:19:33,340 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-06-22 00:19:33,344 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-06-22 00:19:33,349 [ scc.git] DEBUG 973b6bd7b4cb0fc1f06e3462a739b654390a2f60 omero-py (v5.21.0-3-g973b6bd7)
2025-06-22 00:19:33,353 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-06-22 00:19:33,358 [ scc.git] DEBUG c2752646d865e17976dcd2582cefb18fc5c4c0fc omero-web (v5.29.1-1-gc2752646d)
2025-06-22 00:19:33,359 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-06-22 00:19:33,359 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-06-22 00:19:33,359 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-06-22 00:19:33,359 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-06-22 00:19:33,359 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-06-22 00:19:33,359 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-06-22 00:19:33,359 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:19:33,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:33,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2025-06-22 00:19:33,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:34,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/327 HTTP/1.1" 200 None
2025-06-22 00:19:34,190 [ scc.repo] DEBUG # ... Include label: dependencies
2025-06-22 00:19:34,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:34,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/acd6c212282fc45a288c662b1077df0abf25ea06 HTTP/1.1" 200 None
2025-06-22 00:19:35,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:35,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/acd6c212282fc45a288c662b1077df0abf25ea06/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:19:35,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:35,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/acd6c212282fc45a288c662b1077df0abf25ea06 HTTP/1.1" 200 None
2025-06-22 00:19:36,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:36,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/acd6c212282fc45a288c662b1077df0abf25ea06?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:19:36,225 [ scc.repo] DEBUG - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`'
2025-06-22 00:19:36,225 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:19:36,225 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:36,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:36,227 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-22 00:19:36,230 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:19:36,230 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-22 00:19:36,233 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-22 00:19:36,236 [ scc.git] DEBUG Already up to date.
2025-06-22 00:19:36,236 [ scc.git] DEBUG Calling 'git fetch origin pull/327/head'
2025-06-22 00:19:36,545 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2025-06-22 00:19:36,545 [ scc.git] DEBUG * branch refs/pull/327/head -> FETCH_HEAD
2025-06-22 00:19:36,552 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:19:36,552 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:36,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:36,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...acd6c212282fc45a288c662b1077df0abf25ea06'
2025-06-22 00:19:36,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:36,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 327 (Bump omero-web from `d5facbb` to `c275264`) acd6c212282fc45a288c662b1077df0abf25ea06'
2025-06-22 00:19:36,563 [ scc.git] DEBUG Already up to date.
2025-06-22 00:19:36,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:36,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:36,730 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:19:36,774 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:36,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:36,776 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:19:36,981 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:37,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-06-22 00:19:37,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:37,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-06-22 00:19:37,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:38,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-06-22 00:19:38,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:38,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-22 00:19:38,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:39,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:19:39,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:39,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-06-22 00:19:39,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:40,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:19:40,027 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-22 00:19:40,027 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:19:40,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-22 00:19:40,027 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:40,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:40,030 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-22 00:19:40,032 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:19:40,032 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-22 00:19:40,035 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-22 00:19:40,038 [ scc.git] DEBUG Already up to date.
2025-06-22 00:19:40,039 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-06-22 00:19:40,319 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-06-22 00:19:40,319 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-06-22 00:19:40,323 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:19:40,323 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:40,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:40,326 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-22 00:19:40,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:40,331 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-06-22 00:19:40,345 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-06-22 00:19:40,346 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-06-22 00:19:40,350 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-06-22 00:19:40,350 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-06-22 00:19:40,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:40,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:40,526 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:19:40,568 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:40,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:40,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:40,607 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:19:40,612 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f31c0966510> has no local changes
2025-06-22 00:19:40,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:19:40,619 [ scc.git] DEBUG [detached HEAD b62151a] merge master -Dorg -Ssuccess-only
2025-06-22 00:19:40,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:40,619 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:19:40,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:41,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-06-22 00:19:41,359 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:41,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-06-22 00:19:41,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:42,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-06-22 00:19:42,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:42,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-06-22 00:19:42,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:42,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-06-22 00:19:43,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:43,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-22 00:19:43,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:43,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:19:44,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:44,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-06-22 00:19:44,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:44,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:19:44,882 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-22 00:19:45,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:45,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-06-22 00:19:45,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:45,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-06-22 00:19:46,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:46,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-06-22 00:19:46,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:46,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-06-22 00:19:46,801 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:19:46,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-22 00:19:46,801 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:46,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:46,804 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-22 00:19:46,806 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:19:46,806 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-22 00:19:46,809 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-22 00:19:46,812 [ scc.git] DEBUG Already up to date.
2025-06-22 00:19:46,812 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-06-22 00:19:47,082 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-06-22 00:19:47,083 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-06-22 00:19:47,087 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:19:47,087 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:47,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:47,090 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-22 00:19:47,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:47,096 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-06-22 00:19:47,105 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-06-22 00:19:47,106 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:19:47,110 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-06-22 00:19:47,110 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-06-22 00:19:47,110 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-06-22 00:19:47,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:47,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:19:47,274 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:19:47,316 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:19:47,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:19:47,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:19:47,359 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:19:47,363 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f31c0735fd0> has no local changes
2025-06-22 00:19:47,363 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:19:47,370 [ scc.git] DEBUG [detached HEAD 61b3e6e] merge master -Dorg -Ssuccess-only
2025-06-22 00:19:47,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:19:47,371 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:19:47,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:47,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2025-06-22 00:19:48,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:48,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2025-06-22 00:19:48,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:48,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None
2025-06-22 00:19:49,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:49,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None
2025-06-22 00:19:49,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:49,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None
2025-06-22 00:19:50,120 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:50,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None
2025-06-22 00:19:50,368 [ scc.repo] DEBUG # ... Exclude label: exclude
2025-06-22 00:19:50,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:50,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2025-06-22 00:19:51,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:51,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2025-06-22 00:19:51,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:51,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-22 00:19:52,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:52,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:19:52,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:52,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-06-22 00:19:53,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:53,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:19:53,232 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2025-06-22 00:19:53,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:53,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2025-06-22 00:19:53,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:54,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2025-06-22 00:19:54,454 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:54,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2025-06-22 00:19:54,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:55,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:19:55,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:55,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:19:55,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:56,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2025-06-22 00:19:56,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:56,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2025-06-22 00:19:56,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:57,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-22 00:19:57,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:57,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:19:57,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:58,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-06-22 00:19:58,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:58,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:19:58,620 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-06-22 00:19:58,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:59,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-06-22 00:19:59,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:19:59,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-06-22 00:19:59,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:00,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-22 00:20:00,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:00,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:00,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:01,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-06-22 00:20:01,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:01,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:20:01,515 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-06-22 00:20:01,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:02,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-06-22 00:20:02,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:02,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-06-22 00:20:02,756 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:02,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-06-22 00:20:03,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:03,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-06-22 00:20:03,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:03,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-22 00:20:04,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:04,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:04,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:04,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-06-22 00:20:05,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:05,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:20:05,382 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-06-22 00:20:05,383 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:20:05,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-22 00:20:05,383 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:20:05,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:05,386 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-22 00:20:05,388 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:20:05,388 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-22 00:20:05,391 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-22 00:20:05,395 [ scc.git] DEBUG Already up to date.
2025-06-22 00:20:05,395 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-06-22 00:20:05,741 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-22 00:20:05,741 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-06-22 00:20:05,746 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-06-22 00:20:06,027 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-22 00:20:06,027 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-06-22 00:20:06,032 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-06-22 00:20:06,344 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-22 00:20:06,344 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-06-22 00:20:06,349 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-06-22 00:20:06,626 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-06-22 00:20:06,626 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-06-22 00:20:06,632 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:20:06,632 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:20:06,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:06,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-22 00:20:06,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:06,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-06-22 00:20:06,673 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-06-22 00:20:06,673 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-06-22 00:20:06,674 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:20:06,678 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-06-22 00:20:06,679 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-06-22 00:20:06,679 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-06-22 00:20:06,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:06,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:20:06,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-22 00:20:06,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:06,868 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-06-22 00:20:06,889 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:20:06,893 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-06-22 00:20:06,893 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-06-22 00:20:06,893 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-06-22 00:20:06,893 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-06-22 00:20:06,893 [ scc.git] DEBUG create mode 100644 connect.py
2025-06-22 00:20:07,105 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:07,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:20:07,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-06-22 00:20:07,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:07,275 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-06-22 00:20:07,297 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-06-22 00:20:07,299 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:20:07,303 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-06-22 00:20:07,303 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-06-22 00:20:07,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:07,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:20:07,676 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-22 00:20:07,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:07,691 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-06-22 00:20:07,724 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-06-22 00:20:07,725 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:20:07,732 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-06-22 00:20:07,732 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-06-22 00:20:07,927 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:08,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:20:08,098 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:20:08,139 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:20:08,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:08,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:20:08,182 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:20:08,189 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f31c0c7a8d0> has no local changes
2025-06-22 00:20:08,189 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:20:08,196 [ scc.git] DEBUG [detached HEAD cd1b084d] merge master -Dorg -Ssuccess-only
2025-06-22 00:20:08,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:20:08,197 [ scc.git] INFO Overriding base-branch from master to develop
2025-06-22 00:20:08,197 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:20:08,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:08,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-06-22 00:20:08,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:09,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-06-22 00:20:09,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:09,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-06-22 00:20:09,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:10,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-22 00:20:10,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:10,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:10,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:11,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:11,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:11,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-06-22 00:20:11,942 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:12,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:20:12,130 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-22 00:20:12,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:12,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-06-22 00:20:12,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:13,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-06-22 00:20:13,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:13,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-22 00:20:13,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:14,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:14,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:14,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-06-22 00:20:14,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:15,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:20:15,006 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-22 00:20:15,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:15,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-06-22 00:20:15,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:15,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-06-22 00:20:16,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:16,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-06-22 00:20:16,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:16,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-06-22 00:20:16,968 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:20:16,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-22 00:20:16,969 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:20:16,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:16,971 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-06-22 00:20:16,974 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:20:16,974 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-06-22 00:20:16,977 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-06-22 00:20:16,980 [ scc.git] DEBUG Already up to date.
2025-06-22 00:20:16,981 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-06-22 00:20:17,257 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-22 00:20:17,257 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-06-22 00:20:17,262 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-06-22 00:20:17,537 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-06-22 00:20:17,537 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-06-22 00:20:17,541 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:20:17,541 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:20:17,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:17,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-22 00:20:17,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:17,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-22 00:20:17,562 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-06-22 00:20:17,562 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-06-22 00:20:17,563 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-06-22 00:20:17,565 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-06-22 00:20:17,569 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-06-22 00:20:17,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:17,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:20:17,747 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-06-22 00:20:17,753 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-06-22 00:20:17,757 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#444](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-06-22 00:20:17,759 [ scc.config] DEBUG Found github.token
2025-06-22 00:20:17,759 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-06-22 00:20:17,759 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-22 00:20:17,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:17,766 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-06-22 00:20:17,776 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:20:17,779 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-06-22 00:20:17,779 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-06-22 00:20:17,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:18,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:20:18,169 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:20:18,211 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:20:18,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:20:18,213 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:20:18,254 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:20:18,258 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f31c321fe10> has no local changes
2025-06-22 00:20:18,258 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:20:18,265 [ scc.git] DEBUG [detached HEAD 53ee27a] merge master -Dorg -Ssuccess-only
2025-06-22 00:20:18,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:20:18,266 [ scc.repo] DEBUG ## PRs found:
2025-06-22 00:20:18,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:18,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-06-22 00:20:19,124 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:19,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None
2025-06-22 00:20:19,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:19,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-06-22 00:20:20,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:20,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:20,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:20,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:21,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:21,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-06-22 00:20:21,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:21,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:22,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:22,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-06-22 00:20:22,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:22,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None
2025-06-22 00:20:22,799 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4'
2025-06-22 00:20:23,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:23,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None
2025-06-22 00:20:23,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:23,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-22 00:20:24,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:24,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:24,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:24,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:25,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:25,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-22 00:20:25,595 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:25,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:26,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:26,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-06-22 00:20:26,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:26,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None
2025-06-22 00:20:26,864 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-22 00:20:27,115 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:27,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-06-22 00:20:27,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:27,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-06-22 00:20:28,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:28,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-22 00:20:28,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:28,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:29,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:29,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:29,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:29,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-22 00:20:30,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:30,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:30,576 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:30,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-06-22 00:20:31,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:31,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None
2025-06-22 00:20:31,223 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display'
2025-06-22 00:20:31,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:31,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-06-22 00:20:31,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:32,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None
2025-06-22 00:20:32,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:32,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-22 00:20:32,933 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:33,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:33,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:33,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:33,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:34,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-22 00:20:34,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:34,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:34,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:35,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-06-22 00:20:35,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:35,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-06-22 00:20:35,584 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-22 00:20:35,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:36,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-06-22 00:20:36,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:36,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-06-22 00:20:36,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:37,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-22 00:20:37,281 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:37,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:37,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:38,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:38,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:38,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-22 00:20:38,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:39,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:39,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:39,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-06-22 00:20:39,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:39,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-06-22 00:20:39,930 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-06-22 00:20:40,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:40,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-06-22 00:20:40,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:40,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-22 00:20:41,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:41,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:41,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:41,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:42,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:42,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-22 00:20:42,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:42,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:43,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:43,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-06-22 00:20:43,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:43,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-06-22 00:20:43,862 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-22 00:20:44,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:44,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-06-22 00:20:44,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:44,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-06-22 00:20:45,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:45,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-22 00:20:45,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:45,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:46,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:46,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:46,573 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:46,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-22 00:20:47,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:47,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:47,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:47,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-06-22 00:20:48,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:48,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-06-22 00:20:48,234 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-22 00:20:48,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:48,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-06-22 00:20:48,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:49,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-06-22 00:20:49,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:49,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-22 00:20:49,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:50,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:50,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:50,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-06-22 00:20:50,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:51,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-22 00:20:51,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:51,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:51,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:52,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-06-22 00:20:52,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:52,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-06-22 00:20:52,573 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-22 00:20:52,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:53,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-06-22 00:20:53,289 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:53,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-06-22 00:20:53,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:53,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-06-22 00:20:54,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:54,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-06-22 00:20:54,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:54,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-22 00:20:55,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:55,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:55,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-06-22 00:20:56,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:56,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:20:56,366 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-22 00:20:56,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:56,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-06-22 00:20:57,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:57,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-06-22 00:20:57,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:57,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-22 00:20:58,124 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:58,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:20:58,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:58,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-06-22 00:20:59,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:59,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:20:59,358 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-22 00:20:59,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:20:59,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-06-22 00:21:00,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:00,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-06-22 00:21:00,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:00,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-06-22 00:21:01,086 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:01,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-06-22 00:21:01,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:01,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-06-22 00:21:02,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:02,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2
2025-06-22 00:21:02,200 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler'
2025-06-22 00:21:02,200 [ scc.repo] DEBUG ## Branches found:
2025-06-22 00:21:02,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-22 00:21:02,201 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:21:02,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:02,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-06-22 00:21:02,206 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-06-22 00:21:02,206 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-06-22 00:21:02,210 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-06-22 00:21:02,213 [ scc.git] DEBUG Already up to date.
2025-06-22 00:21:02,213 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head'
2025-06-22 00:21:02,952 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:02,952 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD
2025-06-22 00:21:02,955 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-06-22 00:21:03,263 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:03,263 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-06-22 00:21:03,268 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-06-22 00:21:03,548 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:03,548 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-06-22 00:21:03,553 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-06-22 00:21:03,828 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:03,828 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-06-22 00:21:03,833 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-06-22 00:21:04,097 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:04,097 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-06-22 00:21:04,102 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-06-22 00:21:04,384 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:04,384 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-06-22 00:21:04,389 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-06-22 00:21:04,648 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:04,649 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-06-22 00:21:04,653 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-06-22 00:21:04,927 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:04,927 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-06-22 00:21:04,932 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-06-22 00:21:05,217 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:05,217 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD
2025-06-22 00:21:05,222 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head'
2025-06-22 00:21:05,496 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:05,496 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD
2025-06-22 00:21:05,501 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head'
2025-06-22 00:21:05,775 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-06-22 00:21:05,775 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD
2025-06-22 00:21:05,780 [ scc.git] DEBUG ## Unique users: []
2025-06-22 00:21:05,780 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:21:05,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:05,782 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200'
2025-06-22 00:21:05,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:05,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200'
2025-06-22 00:21:06,028 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:06,033 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +-
2025-06-22 00:21:06,033 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++-
2025-06-22 00:21:06,033 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +-
2025-06-22 00:21:06,033 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +-
2025-06-22 00:21:06,033 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +-
2025-06-22 00:21:06,033 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++-
2025-06-22 00:21:06,034 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++-
2025-06-22 00:21:06,034 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +-
2025-06-22 00:21:06,034 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +-
2025-06-22 00:21:06,034 [ scc.git] DEBUG test/unit/test_web.py | 1 +
2025-06-22 00:21:06,034 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-)
2025-06-22 00:21:06,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:06,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:06,235 [ scc.git] DEBUG Resolving previous conflict on Pull Request #168.
2025-06-22 00:21:06,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:06,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:06,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:07,479 [urllib3.conn] DEBUG https://api.github.com:443 "PATCH /repos/ome/omero-web/issues/comments/1023203262 HTTP/1.1" 200 None
2025-06-22 00:21:07,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-22 00:21:07,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:07,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-06-22 00:21:07,513 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-22 00:21:07,513 [ scc.git] DEBUG Auto-merging setup.py
2025-06-22 00:21:07,515 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:07,519 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-06-22 00:21:07,519 [ scc.git] DEBUG setup.py | 1 +
2025-06-22 00:21:07,519 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-06-22 00:21:07,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:07,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:07,918 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-22 00:21:07,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:07,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-06-22 00:21:07,952 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-06-22 00:21:07,952 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-06-22 00:21:07,954 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:07,958 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-06-22 00:21:07,958 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-06-22 00:21:07,958 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-06-22 00:21:08,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:08,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:08,341 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-22 00:21:08,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:08,352 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-06-22 00:21:08,375 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:08,379 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-06-22 00:21:08,379 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-06-22 00:21:08,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:08,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:08,758 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-22 00:21:08,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:08,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-06-22 00:21:08,791 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:08,795 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-06-22 00:21:08,795 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-06-22 00:21:09,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:09,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:09,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-22 00:21:09,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:09,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-06-22 00:21:09,201 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:09,206 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-06-22 00:21:09,206 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-06-22 00:21:09,206 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-06-22 00:21:09,206 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-06-22 00:21:09,206 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-06-22 00:21:09,206 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-06-22 00:21:09,207 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-06-22 00:21:09,207 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-06-22 00:21:09,207 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-06-22 00:21:09,207 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-06-22 00:21:09,207 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-06-22 00:21:09,207 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-06-22 00:21:09,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:09,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:09,590 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-22 00:21:09,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:09,601 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-06-22 00:21:09,630 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-06-22 00:21:09,631 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:09,638 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-06-22 00:21:09,638 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-06-22 00:21:09,638 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-06-22 00:21:09,638 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-06-22 00:21:09,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:10,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:10,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-22 00:21:10,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:10,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-06-22 00:21:10,063 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:10,067 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-06-22 00:21:10,068 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-06-22 00:21:10,068 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-06-22 00:21:10,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:10,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:10,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-22 00:21:10,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:10,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-06-22 00:21:10,471 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:10,476 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++--
2025-06-22 00:21:10,477 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++-------
2025-06-22 00:21:10,477 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++
2025-06-22 00:21:10,477 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-)
2025-06-22 00:21:10,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:10,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:10,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-22 00:21:10,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:10,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-06-22 00:21:10,875 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-22 00:21:10,876 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:10,880 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++-----
2025-06-22 00:21:10,880 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-)
2025-06-22 00:21:11,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:11,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:11,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60'
2025-06-22 00:21:11,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:11,272 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60'
2025-06-22 00:21:11,294 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-06-22 00:21:11,295 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-06-22 00:21:11,299 [ scc.git] DEBUG omeroweb/settings.py | 4 ++--
2025-06-22 00:21:11,299 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-06-22 00:21:11,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:11,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:11,674 [ scc.git] DEBUG Calling 'git submodule update'
2025-06-22 00:21:11,717 [ scc.git] DEBUG Get sha1 of %s
2025-06-22 00:21:11,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-06-22 00:21:11,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:21:11,760 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:21:11,768 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f31c0778210> has no local changes
2025-06-22 00:21:11,768 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 535 will-moore 'Initial working browser history' (stage: draft)
Already up to date.
Merged PRs:
- PR 168 stick 'Changes to nginx @maintenance handler'
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 628 jburel 'Add protocol required since Django4'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:21:11,778 [ scc.git] DEBUG [detached HEAD 97ec5fcb0] merge master -Dorg -Ssuccess-only
2025-06-22 00:21:11,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:21:11,778 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-06-22 00:21:11,827 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-06-22 00:21:11,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:12,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:12,089 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-06-22 00:21:12,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:12,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:12,502 [ scc.config] DEBUG Found submodule.omero-py.url
2025-06-22 00:21:12,746 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:12,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:12,943 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-06-22 00:21:13,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:13,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:13,369 [ scc.config] DEBUG Found submodule.omero-web.url
2025-06-22 00:21:13,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-06-22 00:21:13,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-06-22 00:21:13,774 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-06-22 00:21:13,805 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f31c0902050> has local changes
2025-06-22 00:21:13,805 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 535 will-moore 'Initial working browser history' (stage: draft)
Already up to date.
Merged PRs:
- PR 168 stick 'Changes to nginx @maintenance handler'
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 628 jburel 'Add protocol required since Django4'
Generated by OMERO-python-superbuild-push#444 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/444/)'
2025-06-22 00:21:13,813 [ scc.git] DEBUG [detached HEAD f60102f] merge master -Dorg -Ssuccess-only
2025-06-22 00:21:13,813 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-06-22 00:21:13,813 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-06-22 00:21:13,813 [ scc.merge] INFO Already up to date.
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Merged PRs:
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 327 dependabot[bot] 'Bump omero-web from `d5facbb` to `c275264`'
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-06-22 00:21:13,814 [ scc.merge] INFO Already up to date.
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Merged PRs:
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Repository: ome/omero-marshal
2025-06-22 00:21:13,814 [ scc.merge] INFO Excluded PRs:
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-06-22 00:21:13,814 [ scc.merge] INFO Already up to date.
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Merged PRs:
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Repository: ome/omero-py
2025-06-22 00:21:13,814 [ scc.merge] INFO Excluded PRs:
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
2025-06-22 00:21:13,814 [ scc.merge] INFO Already up to date.
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,814 [ scc.merge] INFO Merged PRs:
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-06-22 00:21:13,814 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-06-22 00:21:13,814 [ scc.merge] INFO
2025-06-22 00:21:13,815 [ scc.merge] INFO Repository: ome/omero-scripts
2025-06-22 00:21:13,815 [ scc.merge] INFO Excluded PRs:
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-06-22 00:21:13,815 [ scc.merge] INFO Already up to date.
2025-06-22 00:21:13,815 [ scc.merge] INFO
2025-06-22 00:21:13,815 [ scc.merge] INFO Merged PRs:
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-06-22 00:21:13,815 [ scc.merge] INFO
2025-06-22 00:21:13,815 [ scc.merge] INFO Conflicting PRs (not included):
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-06-22 00:21:13,815 [ scc.merge] INFO
2025-06-22 00:21:13,815 [ scc.merge] INFO Repository: ome/omero-web
2025-06-22 00:21:13,815 [ scc.merge] INFO Excluded PRs:
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-06-22 00:21:13,815 [ scc.merge] INFO Already up to date.
2025-06-22 00:21:13,815 [ scc.merge] INFO
2025-06-22 00:21:13,815 [ scc.merge] INFO Merged PRs:
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-06-22 00:21:13,815 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2025-06-22 00:21:13,815 [ scc.merge] INFO
2025-06-22 00:21:13,815 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-06-22 00:21:13,815 [ scc.git] DEBUG Calling 'git remote'
2025-06-22 00:21:13,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-06-22 00:21:13,818 [ scc.git] DEBUG Calling 'git remote'
2025-06-22 00:21:13,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:21:13,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-06-22 00:21:13,820 [ scc.git] DEBUG Calling 'git remote'
2025-06-22 00:21:13,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:21:13,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-06-22 00:21:13,822 [ scc.git] DEBUG Calling 'git remote'
2025-06-22 00:21:13,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:21:13,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-06-22 00:21:13,825 [ scc.git] DEBUG Calling 'git remote'
2025-06-22 00:21:13,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-06-22 00:21:13,827 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-06-22 00:21:13,827 [ scc.git] DEBUG Calling 'git remote'
2025-06-22 00:21:13,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 973b6bd7
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 573db34
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from c2752646d
nothing to commit, working tree clean
HEAD detached from 275cf49
nothing to commit, working tree clean
2025-06-22 00:21:42,832 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS