Started by upstream project "Trigger" build number 664
originally caused by:
Started by user devspace
Running as SYSTEM
Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-zarr-pixel-buffer-build
[OMERO-zarr-pixel-buffer-build] $ /bin/bash -xe /tmp/jenkins352765584466197498.sh
+ rm -rf zarr-java
+ git clone https://github.com/zarr-developers/zarr-java.git
Cloning into 'zarr-java'...
+ cd zarr-java
+ mvn clean install -DskipTests -Dgpg.skip=true
[INFO] Scanning for projects...
[INFO]
[INFO] -------------------------< dev.zarr:zarr-java >-------------------------
[INFO] Building zarr-java 0.0.5-SNAPSHOT
[INFO] --------------------------------[ jar ]---------------------------------
[INFO]
[INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ zarr-java ---
[INFO]
[INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ zarr-java ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.13.0:compile (default-compile) @ zarr-java ---
[INFO] Recompiling the module because of changed source code.
[INFO] Compiling 65 source files with javac [debug release 8] to target/classes
[INFO] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/core/BloscCodec.java: Some input files use unchecked or unsafe operations.
[INFO] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/core/BloscCodec.java: Recompile with -Xlint:unchecked for details.
[INFO]
[INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ zarr-java ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/test/resources
[INFO]
[INFO] --- maven-compiler-plugin:3.13.0:testCompile (default-testCompile) @ zarr-java ---
[INFO] Recompiling the module because of changed dependency.
[INFO] Compiling 6 source files with javac [debug release 8] to target/test-classes
[INFO] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/test/java/dev/zarr/zarrjava/ZarrV3Test.java: /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/test/java/dev/zarr/zarrjava/ZarrV3Test.java uses unchecked or unsafe operations.
[INFO] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/test/java/dev/zarr/zarrjava/ZarrV3Test.java: Recompile with -Xlint:unchecked for details.
[INFO]
[INFO] --- maven-surefire-plugin:3.2.5:test (default-test) @ zarr-java ---
[INFO] Tests are skipped.
[INFO]
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ zarr-java ---
[INFO] Building jar: /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/target/zarr-java-0.0.5-SNAPSHOT.jar
[INFO]
[INFO] --- maven-javadoc-plugin:3.5.0:jar (attach-javadoc) @ zarr-java ---
[INFO] No previous run data found, generating javadoc.
[WARNING] Javadoc Warnings
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/AbstractCodec.java:6: warning: no comment
[WARNING] public abstract class AbstractCodec implements Codec{
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/AbstractCodec.java:7: warning: no comment
[WARNING] protected ArrayMetadata.CoreArrayMetadata arrayMetadata;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/Codec.java:9: warning: no comment
[WARNING] ArrayMetadata.CoreArrayMetadata resolveArrayMetadata() throws ZarrException;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/Codec.java:7: warning: no comment
[WARNING] void setCoreArrayMetadata(ArrayMetadata.CoreArrayMetadata codecArrayMetadata) throws ZarrException;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Node.java:25: warning: no @return
[WARNING] static Node open(StoreHandle storeHandle) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Node.java:47: warning: no @return
[WARNING] static Node open(Path path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Node.java:58: warning: no @return
[WARNING] static Node open(String path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/AbstractNode.java:7: warning: no comment
[WARNING] public class AbstractNode implements Node {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/AbstractNode.java:10: warning: no comment
[WARNING] public final StoreHandle storeHandle;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/AbstractNode.java:12: warning: no comment
[WARNING] protected AbstractNode(@Nonnull StoreHandle storeHandle) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:37: warning: no @return
[WARNING] public static Array open(StoreHandle storeHandle) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:57: warning: no @return
[WARNING] public static Array open(Path path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:68: warning: no @return
[WARNING] public static Array open(String path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:158: warning: no @return
[WARNING] public ucar.ma2.Array readChunk(long[] chunkCoords) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:217: warning: no @return
[WARNING] public ucar.ma2.Array read() throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:230: warning: no @return
[WARNING] public ucar.ma2.Array read(final long[] offset, final int[] shape) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:241: warning: no @return
[WARNING] public ucar.ma2.Array read(final boolean parallel) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:265: warning: no @return
[WARNING] public ucar.ma2.Array read(final long[] offset, final int[] shape, final boolean parallel) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:21: warning: no comment
[WARNING] public abstract class Array extends AbstractNode {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:333: warning: no comment
[WARNING] public static final class ArrayAccessor {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:23: warning: no comment
[WARNING] protected CodecPipeline codecPipeline;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:26: warning: no comment
[WARNING] protected Array(StoreHandle storeHandle) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:329: warning: no comment
[WARNING] public ArrayAccessor access() {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:24: warning: no comment
[WARNING] public abstract ArrayMetadata metadata();
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Node.java:31: warning: no @return
[WARNING] static Node open(StoreHandle storeHandle) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:48: warning: no @return
[WARNING] public static Array open(StoreHandle storeHandle) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:66: warning: no @return
[WARNING] public static Array open(Path path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:77: warning: no @return
[WARNING] public static Array open(String path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:91: warning: no @return
[WARNING] public static Array create(Path path, ArrayMetadata arrayMetadata)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:106: warning: no @return
[WARNING] public static Array create(String path, ArrayMetadata arrayMetadata)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:120: warning: no @return
[WARNING] public static Array create(StoreHandle storeHandle, ArrayMetadata arrayMetadata)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:136: warning: no @return
[WARNING] public static Array create(StoreHandle storeHandle, ArrayMetadata arrayMetadata, boolean existsOk)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:22: warning: no comment
[WARNING] public class Array extends dev.zarr.zarrjava.core.Array implements Node {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:30: warning: no comment
[WARNING] protected Array(StoreHandle storeHandle, ArrayMetadata arrayMetadata) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:150: warning: no comment
[WARNING] public static Array create(StoreHandle storeHandle,
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:158: warning: no comment
[WARNING] public static ArrayMetadataBuilder metadataBuilder() {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Array.java:163: warning: no comment
[WARNING] public static ArrayMetadataBuilder metadataBuilder(ArrayMetadata existingMetadata) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Node.java:49: warning: no comment
[WARNING] static Node open(Path path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/Node.java:53: warning: no comment
[WARNING] static Node open(String path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Node.java:33: warning: no @return
[WARNING] static Node open(StoreHandle storeHandle) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:42: warning: no @return
[WARNING] public static Array open(StoreHandle storeHandle) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:60: warning: no @return
[WARNING] public static Array open(Path path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:71: warning: no @return
[WARNING] public static Array open(String path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:85: warning: no @return
[WARNING] public static Array create(Path path, ArrayMetadata arrayMetadata)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:100: warning: no @return
[WARNING] public static Array create(String path, ArrayMetadata arrayMetadata)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:115: warning: no @return
[WARNING] public static Array create(StoreHandle storeHandle, ArrayMetadata arrayMetadata)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:131: warning: no @return
[WARNING] public static Array create(StoreHandle storeHandle, ArrayMetadata arrayMetadata, boolean existsOk)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:157: warning: no @return
[WARNING] public static Array create(StoreHandle storeHandle,
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:201: warning: no @return
[WARNING] public Array resize(long[] newShape) throws ZarrException, IOException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:221: warning: no @return
[WARNING] public Array setAttributes(Map<String, Object> newAttributes) throws ZarrException, IOException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:239: warning: no @return
[WARNING] public Array updateAttributes(Function<Map<String, Object>, Map<String, Object>> attributeMapper)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:21: warning: no comment
[WARNING] public class Array extends dev.zarr.zarrjava.core.Array implements Node {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:29: warning: no comment
[WARNING] protected Array(StoreHandle storeHandle, ArrayMetadata arrayMetadata) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:169: warning: no comment
[WARNING] public static Array create(String path, Function<ArrayMetadataBuilder, ArrayMetadataBuilder> arrayMetadataBuilderMapper, boolean existsOk)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:164: warning: no comment
[WARNING] public static Array create(Path path, Function<ArrayMetadataBuilder, ArrayMetadataBuilder> arrayMetadataBuilderMapper, boolean existsOk)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:175: warning: no comment
[WARNING] public static ArrayMetadataBuilder metadataBuilder() {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Array.java:180: warning: no comment
[WARNING] public static ArrayMetadataBuilder metadataBuilder(ArrayMetadata existingMetadata) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Node.java:52: warning: no comment
[WARNING] static Node open(Path path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/Node.java:56: warning: no comment
[WARNING] static Node open(String path) throws IOException, ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:341: warning: no comment
[WARNING] public ArrayAccessor(@Nonnull Array array) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:365: warning: no comment
[WARNING] public ucar.ma2.Array read() throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:346: warning: no comment
[WARNING] public ArrayAccessor withOffset(@Nonnull long... offset) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:353: warning: no comment
[WARNING] public ArrayAccessor withShape(@Nonnull int... shape) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:359: warning: no comment
[WARNING] public ArrayAccessor withShape(@Nonnull long... shape) {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/Array.java:375: warning: no comment
[WARNING] public void write(@Nonnull ucar.ma2.Array content) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayArrayCodec.java:6: warning: no comment
[WARNING] public abstract class ArrayArrayCodec extends AbstractCodec {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayArrayCodec.java:11: warning: no comment
[WARNING] public abstract Array decode(Array chunkArray)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayArrayCodec.java:8: warning: no comment
[WARNING] public abstract Array encode(Array chunkArray)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayBytesCodec.java:8: warning: no comment
[WARNING] public abstract class ArrayBytesCodec extends AbstractCodec {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayBytesCodec.java:16: warning: no comment
[WARNING] public abstract static class WithPartialDecode extends ArrayBytesCodec {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayBytesCodec.java:13: warning: no comment
[WARNING] public abstract Array decode(ByteBuffer chunkBytes)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayBytesCodec.java:10: warning: no comment
[WARNING] public abstract ByteBuffer encode(Array chunkArray)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/codec/ArrayBytesCodec.java:21: warning: no comment
[WARNING] protected abstract Array decodePartial(
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:15: warning: no comment
[WARNING] public abstract class ArrayMetadata {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:150: warning: no comment
[WARNING] public static final class CoreArrayMetadata {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:20: warning: no comment
[WARNING] public final Object fillValue;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:22: warning: no comment
[WARNING] public final Object parsedFillValue;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:17: warning: no comment
[WARNING] public final long[] shape;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:24: warning: no comment
[WARNING] public ArrayMetadata(long[] shape, Object fillValue, DataType dataType) throws ZarrException {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:38: warning: no comment
[WARNING] public abstract Array allocateFillValueChunk();
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:40: warning: no comment
[WARNING] public abstract ChunkKeyEncoding chunkKeyEncoding();
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:34: warning: no comment
[WARNING] public abstract int[] chunkShape();
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:36: warning: no comment
[WARNING] public abstract DataType dataType();
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:30: warning: no comment
[WARNING] public int ndim() {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:42: warning: no comment
[WARNING] public abstract Object parsedFillValue();
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/core/ArrayMetadata.java:44: warning: no comment
[WARNING] public static Object parseFillValue(Object fillValue, @Nonnull DataType dataType)
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:17: warning: no comment
[WARNING] public class ArrayMetadata extends dev.zarr.zarrjava.core.ArrayMetadata {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:23: warning: no comment
[WARNING] public final int[] chunks;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:40: warning: no comment
[WARNING] public final Codec compressor;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:43: warning: no comment
[WARNING] public CoreArrayMetadata coreArrayMetadata;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:26: warning: no comment
[WARNING] public final DataType dataType;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:35: warning: no comment
[WARNING] public final Separator dimensionSeparator;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:29: warning: no comment
[WARNING] public final Endianness endianness;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:38: warning: no comment
[WARNING] public final Codec[] filters;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:32: warning: no comment
[WARNING] public final Order order;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:21: warning: no comment
[WARNING] public final int zarrFormat = ZARR_FORMAT;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v2/ArrayMetadata.java:47: warning: no comment
[WARNING] public ArrayMetadata(
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/ArrayMetadata.java:20: warning: no comment
[WARNING] public final class ArrayMetadata extends dev.zarr.zarrjava.core.ArrayMetadata {
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/ArrayMetadata.java:42: warning: no comment
[WARNING] public final Map<String, Object> attributes;
[WARNING] ^
[WARNING] /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/src/main/java/dev/zarr/zarrjava/v3/ArrayMetadata.java:33: warning: no comment
[WARNING] public final ChunkGrid chunkGrid;
[WARNING] ^
[WARNING] 100 warnings
[INFO] Building jar: /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/target/zarr-java-0.0.5-SNAPSHOT-javadoc.jar
[INFO]
[INFO] >>> maven-source-plugin:3.1.0:jar (default) > generate-sources @ zarr-java >>>
[INFO]
[INFO] <<< maven-source-plugin:3.1.0:jar (default) < generate-sources @ zarr-java <<<
[INFO]
[INFO]
[INFO] --- maven-source-plugin:3.1.0:jar (default) @ zarr-java ---
[INFO] Building jar: /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/target/zarr-java-0.0.5-SNAPSHOT-sources.jar
[INFO]
[INFO] --- maven-gpg-plugin:1.6:sign (sign-artifacts) @ zarr-java ---
[INFO]
[INFO] --- maven-install-plugin:2.4:install (default-install) @ zarr-java ---
[INFO] Installing /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/target/zarr-java-0.0.5-SNAPSHOT.jar to /home/omero/.m2/repository/dev/zarr/zarr-java/0.0.5-SNAPSHOT/zarr-java-0.0.5-SNAPSHOT.jar
[INFO] Installing /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/pom.xml to /home/omero/.m2/repository/dev/zarr/zarr-java/0.0.5-SNAPSHOT/zarr-java-0.0.5-SNAPSHOT.pom
[INFO] Installing /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/target/zarr-java-0.0.5-SNAPSHOT-javadoc.jar to /home/omero/.m2/repository/dev/zarr/zarr-java/0.0.5-SNAPSHOT/zarr-java-0.0.5-SNAPSHOT-javadoc.jar
[INFO] Installing /home/omero/workspace/OMERO-zarr-pixel-buffer-build/zarr-java/target/zarr-java-0.0.5-SNAPSHOT-sources.jar to /home/omero/.m2/repository/dev/zarr/zarr-java/0.0.5-SNAPSHOT/zarr-java-0.0.5-SNAPSHOT-sources.jar
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 5.971 s
[INFO] Finished at: 2025-10-24T10:35:28Z
[INFO] ------------------------------------------------------------------------
+ cd ..
+ rm -rf omero-zarr-pixel-buffer
+ git clone -b merge_ci https://github.com/snoopycrimecop/omero-zarr-pixel-buffer.git
Cloning into 'omero-zarr-pixel-buffer'...
+ cd omero-zarr-pixel-buffer
+ ./gradlew publishToMavenLocal
Starting a Gradle Daemon (subsequent builds will be faster)
> Task :compileJava
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:21: error: metadata has private access in Array
int[] shape = new int[this.array.metadata.shape.length];
^
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:22: error: metadata has private access in Array
for (int i = 0; i < this.array.metadata.shape.length; i++) {
^
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:23: error: metadata has private access in Array
shape[i] = (int) this.array.metadata.shape[i];
^
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:30: error: metadata has private access in Array
int[] chunks = new int[this.array.metadata.chunkShape().length];
^
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:31: error: metadata has private access in Array
for (int i = 0; i < this.array.metadata.chunkShape().length; i++) {
^
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:32: error: metadata has private access in Array
chunks[i] = (int) this.array.metadata.chunkShape()[i];
^
/home/omero/workspace/OMERO-zarr-pixel-buffer-build/omero-zarr-pixel-buffer/src/main/java/com/glencoesoftware/omero/zarr/compat/ZArrayv3.java:67: error: metadata has private access in Array
DataType dataType = array.metadata.dataType;
^
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
7 errors
> Task :compileJava FAILED
FAILURE: Build failed with an exception.
* What went wrong:
Execution failed for task ':compileJava'.
> Compilation failed; see the compiler error output for details.
* Try:
> Run with --info option to get more log output.
> Run with --scan to get full insights.
BUILD FAILED in 9s
1 actionable task: 1 executed
Build step 'Execute shell' marked build as failure
Archiving artifacts
Finished: FAILURE