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#14 517.4 Progress (3): 0.9/3.2 MB | 475 kB | 15 kB
                                         
Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.jar
#14 517.4 Progress (3): 0.9/3.2 MB | 475 kB | 15 kB
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#14 517.4 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.jar
#14 517.4 Progress (3): 1.1/3.2 MB | 475 kB | 33 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.jar (33 kB at 312 kB/s)
#14 517.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.jar
#14 517.5 Progress (2): 1.6/3.2 MB | 475 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.jar (475 kB at 3.8 MB/s)
#14 517.5 Progress (3): 1.9/3.2 MB | 274/345 kB | 44 kB
                                             
Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.jar
#14 517.5 Progress (3): 1.9/3.2 MB | 278/345 kB | 44 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.tracker/1.5.4/org.osgi.util.tracker-1.5.4.jar (44 kB at 288 kB/s)
#14 517.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.repository/1.1.0/org.osgi.service.repository-1.1.0.jar
#14 517.5 Progress (3): 2.2/3.2 MB | 345 kB | 37 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.jar (345 kB at 2.2 MB/s)
#14 517.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.2.0/org.osgi.util.function-1.2.0.jar
#14 517.5 Progress (2): 2.4/3.2 MB | 37 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/osgi.annotation/8.0.1/osgi.annotation-8.0.1.jar (37 kB at 210 kB/s)
#14 517.5 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.promise/1.2.0/org.osgi.util.promise-1.2.0.jar
#14 517.5 Progress (2): 2.9/3.2 MB | 17 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.log/1.3.0/org.osgi.service.log-1.3.0.jar (17 kB at 82 kB/s)
#14 517.6 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bnd.util/6.3.1/biz.aQute.bnd.util-6.3.1.jar
#14 517.6 Progress (4): 3.2 MB | 25 kB | 24 kB | 3.8/83 kB
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Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.service.repository/1.1.0/org.osgi.service.repository-1.1.0.jar (25 kB at 117 kB/s)
#14 517.6 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.25/slf4j-api-1.7.25.jar
#14 517.6 Downloaded from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.jar (3.2 MB at 15 MB/s)
#14 517.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.bundlerepository/1.6.6/org.apache.felix.bundlerepository-1.6.6.jar
#14 517.6 Downloaded from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.util.function/1.2.0/org.osgi.util.function-1.2.0.jar (24 kB at 105 kB/s)
#14 517.6 Downloading from central: https://repo.maven.apache.org/maven2/org/easymock/easymock/2.4/easymock-2.4.jar
#14 517.6 Progress (2): 83 kB | 4.1/424 kB
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#14 517.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/org.apache.felix.utils/1.6.0/org.apache.felix.utils-1.6.0.jar
#14 517.6 Progress (1): 200/424 kB
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#14 517.6 [output clipped, log limit 2MiB reached]
#14 659.7 SLF4J: No SLF4J providers were found.
#14 659.7 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 659.7 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 667.0s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 0.265 Buildfile: /bio-formats-build/bioformats/build.xml
#16 0.593      [echo] isSnapshot = true
#16 2.696 
#16 2.696 copy-jars:
#16 2.696 
#16 2.696 deps-formats-api:
#16 2.775      [echo] isSnapshot = true
#16 2.827 
#16 2.827 install-pom:
#16 2.993 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/pom-bio-formats-8.4.0-SNAPSHOT.pom
#16 3.002 [resolver:install] Installing ome:pom-bio-formats:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 3.006 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 3.007 
#16 3.007 jar-formats-api:
#16 3.112      [echo] isSnapshot = true
#16 3.268 
#16 3.268 init-title:
#16 3.269      [echo] ----------=========== formats-api ===========----------
#16 3.269 
#16 3.269 init-timestamp:
#16 3.275 
#16 3.275 init:
#16 3.275 
#16 3.275 copy-resources:
#16 3.276     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.289      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.292 
#16 3.292 compile:
#16 3.484 [resolver:resolve] Resolving artifacts
#16 3.511     [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.722     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.323     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.323     [javac] import loci.common.ReflectedUniverse;
#16 4.323     [javac]                   ^
#16 4.623     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.623     [javac]     int currentIndex = r.getCoreIndex();
#16 4.623     [javac]                         ^
#16 4.623     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.623     [javac]     r.setCoreIndex(coreIndex);
#16 4.623     [javac]      ^
#16 4.623     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.623     [javac]     r.setCoreIndex(currentIndex);
#16 4.623     [javac]      ^
#16 4.724     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.724     [javac]   public void setCoreIndex(int no) {
#16 4.724     [javac]               ^
#16 4.724     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.724     [javac]   public int getCoreIndex() {
#16 4.724     [javac]              ^
#16 4.724     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.724     [javac]   public int coreIndexToSeries(int index)
#16 4.724     [javac]              ^
#16 4.724     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.724     [javac]   public int seriesToCoreIndex(int series)
#16 4.724     [javac]              ^
#16 4.724     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.724     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 4.724     [javac]                             ^
#16 4.825     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.825     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.825     [javac]                                              ^
#16 4.825     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.825     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.825     [javac]                                              ^
#16 4.825     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.825     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.825     [javac]                                                      ^
#16 4.825     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.825     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.825     [javac]                                                      ^
#16 4.925     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.925     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.925     [javac]     ^
#16 4.925     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.925     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 4.925     [javac]                               ^
#16 5.026     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.026     [javac]   public void setCoreIndex(int no) {
#16 5.026     [javac]               ^
#16 5.026     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.026     [javac]   public int getCoreIndex() {
#16 5.026     [javac]              ^
#16 5.026     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.026     [javac]   public int coreIndexToSeries(int index) {
#16 5.026     [javac]              ^
#16 5.026     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.026     [javac]   public int seriesToCoreIndex(int series) {
#16 5.026     [javac]              ^
#16 5.026     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.026     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 5.026     [javac]                             ^
#16 5.026     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.026     [javac]     return getReader().getCoreMetadataList();
#16 5.026     [javac]                       ^
#16 5.027     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.027     [javac]     return getReader().getCoreIndex();
#16 5.027     [javac]                       ^
#16 5.027     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.027     [javac]     getReader().setCoreIndex(no);
#16 5.027     [javac]                ^
#16 5.027     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.027     [javac]     return getReader().seriesToCoreIndex(series);
#16 5.027     [javac]                       ^
#16 5.027     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.027     [javac]     return getReader().coreIndexToSeries(index);
#16 5.027     [javac]                       ^
#16 5.127     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.127     [javac]   public void setCoreIndex(int no) {
#16 5.127     [javac]               ^
#16 5.127     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.127     [javac]   public int getCoreIndex() {
#16 5.127     [javac]              ^
#16 5.127     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.127     [javac]   public int coreIndexToSeries(int index) {
#16 5.128     [javac]              ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.128     [javac]   public int seriesToCoreIndex(int series) {
#16 5.128     [javac]              ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.128     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 5.128     [javac]                             ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.128     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 5.128     [javac]                                        ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.128     [javac]     return reader.getCoreIndex();
#16 5.128     [javac]                  ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.128     [javac]     reader.setCoreIndex(no);
#16 5.128     [javac]           ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.128     [javac]     return reader.seriesToCoreIndex(series);
#16 5.128     [javac]                  ^
#16 5.128     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.128     [javac]     return reader.coreIndexToSeries(index);
#16 5.128     [javac]                  ^
#16 5.329     [javac] Note: Some input files use unchecked or unsafe operations.
#16 5.329     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 5.329     [javac] 36 warnings
#16 5.330 
#16 5.330 formats-api.jar:
#16 5.330     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 5.354       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 5.385 [resolver:install] Using default POM (ome:formats-api:8.4.0-SNAPSHOT)
#16 5.388 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.pom
#16 5.390 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.jar
#16 5.392 [resolver:install] Installing ome:formats-api:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 5.395 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 5.395 
#16 5.395 deps-turbojpeg:
#16 5.395 
#16 5.395 jar-turbojpeg:
#16 5.490      [echo] isSnapshot = true
#16 5.633 
#16 5.633 init-title:
#16 5.633      [echo] ----------=========== turbojpeg ===========----------
#16 5.633 
#16 5.633 init-timestamp:
#16 5.633 
#16 5.633 init:
#16 5.633 
#16 5.633 copy-resources:
#16 5.633     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.634 
#16 5.634 compile:
#16 5.644 [resolver:resolve] Resolving artifacts
#16 5.647     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.850     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.530     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 6.530     [javac]   protected void finalize() throws Throwable {
#16 6.530     [javac]                  ^
#16 6.530     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 6.530     [javac]       super.finalize();
#16 6.530     [javac]            ^
#16 6.530     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 6.530     [javac]   protected void finalize() throws Throwable {
#16 6.530     [javac]                  ^
#16 6.530     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 6.530     [javac]       super.finalize();
#16 6.530     [javac]            ^
#16 6.530     [javac] 5 warnings
#16 6.531 
#16 6.531 jar:
#16 6.535       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.719 [resolver:install] Using default POM (ome:turbojpeg:8.4.0-SNAPSHOT)
#16 6.727 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.pom
#16 6.730 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.jar
#16 6.732 [resolver:install] Installing ome:turbojpeg:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 6.736 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.737 
#16 6.737 deps-formats-bsd:
#16 6.737 
#16 6.737 jar-formats-bsd:
#16 6.845      [echo] isSnapshot = true
#16 6.999 
#16 6.999 init-title:
#16 6.999      [echo] ----------=========== formats-bsd ===========----------
#16 6.999 
#16 6.999 init-timestamp:
#16 7.000 
#16 7.000 init:
#16 7.000 
#16 7.000 copy-resources:
#16 7.000     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.003      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.004 
#16 7.004 compile:
#16 7.221 [resolver:resolve] Resolving artifacts
#16 7.247     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.456     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.557     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.557     [javac] import loci.common.ReflectedUniverse;
#16 8.557     [javac]                   ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.958     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 8.958     [javac]                            ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.958     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 8.958     [javac]                                          ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.958     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.958     [javac]                   ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.958     [javac]     reader.setCoreIndex(coreIndex);
#16 8.958     [javac]           ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.958     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.958     [javac]                   ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.958     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.958     [javac]                   ^
#16 8.958     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 8.958     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 8.959     [javac]                                         ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.959     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.959     [javac]                   ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 8.959     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 8.959     [javac]                                         ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.959     [javac]     int n = reader.getCoreMetadataList().size();
#16 8.959     [javac]                   ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 8.959     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 8.959     [javac]                                  ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.959     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.959     [javac]                  ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 8.959     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 8.959     [javac]                                              ^
#16 8.959     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 8.959     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 8.959     [javac]                             ^
#16 9.059     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.059     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 9.059     [javac]               ^
#16 9.059     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.059     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 9.059     [javac]                           ^
#16 9.059     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.059     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 9.059     [javac]                 ^
#16 9.060     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.060     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 9.060     [javac]               ^
#16 9.060     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.060     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 9.060     [javac]                            ^
#16 9.160     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.160     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 9.160     [javac]                               ^
#16 9.260     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.260     [javac]     BitWriter out = new BitWriter();
#16 9.260     [javac]     ^
#16 9.260     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.260     [javac]     BitWriter out = new BitWriter();
#16 9.261     [javac]                         ^
#16 9.361     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.361     [javac]       return new Double(v);
#16 9.361     [javac]              ^
#16 10.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2129: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.06     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 10.06     [javac]                                         ^
#16 10.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2136: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.06     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 10.06     [javac]                                         ^
#16 10.06     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2143: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.06     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 10.06     [javac]                                         ^
#16 10.16     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.16     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 10.16     [javac]                                 ^
#16 10.36     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.36     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.36     [javac]                                                                    ^
#16 10.46     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.46     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 10.46     [javac]                          ^
#16 10.56     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java:3095: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.56     [javac] 									store.setPlaneExposureTime(new Time(new Double(expTime), UNITS.MILLISECOND), capture, imageIndex);
#16 10.56     [javac] 									                                    ^
#16 10.56     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.56     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 10.56     [javac]                                                    ^
#16 10.56     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.56     [javac]   protected ReflectedUniverse r;
#16 10.56     [javac]             ^
#16 10.56     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.56     [javac]       r = new ReflectedUniverse();
#16 10.56     [javac]               ^
#16 10.66     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 10.66     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 10.66     [javac]                                                                               ^
#16 10.66     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 10.66     [javac]           double pz = physicalZ.value(UNITS.MM).doubleValue();
#16 10.66     [javac]                                            ^
#16 10.66     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 10.66     [javac]         double px = physicalX == null ? 1.0 : physicalX.value(UNITS.MM).doubleValue();
#16 10.66     [javac]                                                                    ^
#16 10.66     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1090: warning: [deprecation] MM in UNITS has been deprecated
#16 10.66     [javac]         double py = physicalY == null ? 1.0 : physicalY.value(UNITS.MM).doubleValue();
#16 10.66     [javac]                                                                    ^
#16 10.66     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1111: warning: [deprecation] MM in UNITS has been deprecated
#16 10.67     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 10.67     [javac]                                                                                        ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1115: warning: [deprecation] MM in UNITS has been deprecated
#16 10.67     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 10.67     [javac]                                                                                         ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1121: warning: [deprecation] MM in UNITS has been deprecated
#16 10.67     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 10.67     [javac]                                                                                        ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1169: warning: [deprecation] MM in UNITS has been deprecated
#16 10.67     [javac]             double ox = physicalX.value(UNITS.MM).floatValue() * width;
#16 10.67     [javac]                                              ^
#16 10.67     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1174: warning: [deprecation] MM in UNITS has been deprecated
#16 10.67     [javac]             double oy = physicalY.value(UNITS.MM).floatValue() * height;
#16 10.67     [javac]                                              ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.77     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.77     [javac]               ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.77     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 10.77     [javac]                                            ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.77     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.77     [javac]               ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 10.77     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 10.77     [javac]                                             ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 10.77     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 10.77     [javac]                                        ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.77     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 10.77     [javac]                           ^
#16 10.77     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.77     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 10.77     [javac]                   ^
#16 10.84     [javac] Note: Some input files use unchecked or unsafe operations.
#16 10.85     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 10.85     [javac] 51 warnings
#16 10.85 
#16 10.85 formats-bsd.jar:
#16 10.85       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 10.96 [resolver:install] Using default POM (ome:formats-bsd:8.4.0-SNAPSHOT)
#16 10.96 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.pom
#16 10.97 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.jar
#16 10.97 [resolver:install] Installing ome:formats-bsd:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 10.97 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 10.97 
#16 10.97 deps-formats-gpl:
#16 10.97 
#16 10.97 jar-formats-gpl:
#16 11.06      [echo] isSnapshot = true
#16 11.20 
#16 11.20 init-title:
#16 11.20      [echo] ----------=========== formats-gpl ===========----------
#16 11.20 
#16 11.20 init-timestamp:
#16 11.20 
#16 11.20 init:
#16 11.20 
#16 11.20 copy-resources:
#16 11.20     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.20      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.20 
#16 11.20 compile:
#16 11.57 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 11.98 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.36 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.37 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.57 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.69 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.71 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 12.95 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.07 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.11 [resolver:resolve] Resolving artifacts
#16 13.12 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.12 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.37 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.37 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.73 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.77 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.78     [javac] Compiling 178 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.99     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 15.19     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.19     [javac] import loci.formats.codec.BitWriter;
#16 15.19     [javac]                          ^
#16 15.29     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.29     [javac] import loci.formats.codec.BitWriter;
#16 15.29     [javac]                          ^
#16 17.30     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.30     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.30     [javac]                                          ^
#16 17.30     [javac]   cast to Object for a varargs call
#16 17.30     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 17.30     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.30     [javac]     BitWriter bits = null;
#16 17.30     [javac]     ^
#16 17.30     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.30     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 17.30     [javac]                  ^
#16 17.70     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.70     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.70     [javac]                                                    ^
#16 18.00     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:469: warning: [deprecation] getImmersion(String) in FormatReader has been deprecated
#16 18.00     [javac]       store.setObjectiveImmersion(getImmersion(immersion), 0, index);
#16 18.00     [javac]                                   ^
#16 18.00     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:487: warning: [deprecation] getAcquisitionMode(String) in FormatReader has been deprecated
#16 18.00     [javac]       AcquisitionMode mode = getAcquisitionMode(acquisitionMode);
#16 18.00     [javac]                              ^
#16 18.10     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.10     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.10     [javac]     ^
#16 18.10     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.10     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.10     [javac]                          ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.35     [javac]     Variable variable = group.findVariable(variableName);
#16 18.35     [javac]                              ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.35     [javac]     Variable variable = group.findVariable(variableName);
#16 18.35     [javac]                              ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.35     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 18.35     [javac]                                            ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.35     [javac]       String groupName = group.getName();
#16 18.35     [javac]                               ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.35     [javac]       List<Attribute> attributes = group.getAttributes();
#16 18.35     [javac]                                         ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.35     [javac]         String variableName = variable.getName();
#16 18.35     [javac]                                       ^
#16 18.35     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.35     [javac]       Group nextParent = parent.findGroup(token);
#16 18.35     [javac]                                ^
#16 18.35     [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.35     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.35     [javac] 18 warnings
#16 18.36 
#16 18.36 formats-gpl.jar:
#16 18.36       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 18.50 [resolver:install] Using default POM (ome:formats-gpl:8.4.0-SNAPSHOT)
#16 18.50 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.pom
#16 18.50 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar
#16 18.51 [resolver:install] Installing ome:formats-gpl:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 18.51 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.51 
#16 18.51 deps-bio-formats-plugins:
#16 18.51 
#16 18.51 jar-bio-formats-plugins:
#16 18.60      [echo] isSnapshot = true
#16 18.73 
#16 18.73 init-title:
#16 18.73      [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.73 
#16 18.73 init-timestamp:
#16 18.73 
#16 18.73 init:
#16 18.73 
#16 18.73 copy-resources:
#16 18.73     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.73      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.73 
#16 18.73 compile:
#16 18.99 [resolver:resolve] Resolving artifacts
#16 19.00     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.21     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.01     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.01     [javac] import loci.common.ReflectedUniverse;
#16 20.01     [javac]                   ^
#16 20.01     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.01     [javac] import loci.common.ReflectedUniverse;
#16 20.01     [javac]                   ^
#16 20.51     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 20.51     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 20.51     [javac]                                      ^
#16 20.71     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.71     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 20.71     [javac]         ^
#16 20.71     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.71     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 20.71     [javac]                                   ^
#16 20.81     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.81     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 20.81     [javac]     ^
#16 20.81     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.81     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 20.81     [javac]                                ^
#16 21.21     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.21     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.21     [javac] 8 warnings
#16 21.21 
#16 21.21 bio-formats-plugins.jar:
#16 21.21       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.24 [resolver:install] Using default POM (ome:bio-formats_plugins:8.4.0-SNAPSHOT)
#16 21.24 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.pom
#16 21.29 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar
#16 21.29 [resolver:install] Installing ome:bio-formats_plugins:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 21.29 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 21.29 
#16 21.29 deps-bio-formats-tools:
#16 21.29 
#16 21.29 jar-bio-formats-tools:
#16 21.39      [echo] isSnapshot = true
#16 21.52 
#16 21.52 init-title:
#16 21.52      [echo] ----------=========== bio-formats-tools ===========----------
#16 21.52 
#16 21.52 init-timestamp:
#16 21.52 
#16 21.52 init:
#16 21.52 
#16 21.52 copy-resources:
#16 21.52     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.52 
#16 21.52 compile:
#16 21.74 [resolver:resolve] Resolving artifacts
#16 21.75     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.96     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 23.12     [javac] 1 warning
#16 23.12 
#16 23.12 bio-formats-tools.jar:
#16 23.12       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 23.13 [resolver:install] Using default POM (ome:bio-formats-tools:8.4.0-SNAPSHOT)
#16 23.13 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.pom
#16 23.13 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar
#16 23.13 [resolver:install] Installing ome:bio-formats-tools:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 23.13 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.14 
#16 23.14 deps-tests:
#16 23.14 
#16 23.14 jar-tests:
#16 23.22      [echo] isSnapshot = true
#16 23.35 
#16 23.35 init-title:
#16 23.35      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 23.35 
#16 23.35 init-timestamp:
#16 23.35 
#16 23.35 init:
#16 23.35 
#16 23.35 copy-resources:
#16 23.35     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.35 
#16 23.35 compile:
#16 23.68 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.77 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.13 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.16 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.58 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 25.03 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 25.04 [resolver:resolve] Resolving artifacts
#16 25.05 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.11 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.47 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.48 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.89 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.16 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 26.16     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 26.37     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 27.37     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.37     [javac]         int index = unflattenedReader.getCoreIndex();
#16 27.37     [javac]                                      ^
#16 27.37     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 27.37     [javac]         reader.setCoreIndex(index);
#16 27.37     [javac]               ^
#16 27.57     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2348: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.57     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 27.57     [javac]                                              ^
#16 27.57     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2514: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.57     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 27.57     [javac]                                              ^
#16 27.87     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.87     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 27.87     [javac]                                                    ^
#16 27.87     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.87     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 27.87     [javac]                                                    ^
#16 27.87     [javac] Note: Some input files use unchecked or unsafe operations.
#16 27.87     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 27.87     [javac] 7 warnings
#16 27.91 
#16 27.91 tests.jar:
#16 27.92       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.93 [resolver:install] Using default POM (ome:test-suite:8.4.0-SNAPSHOT)
#16 27.93 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.pom
#16 27.94 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.jar
#16 27.94 [resolver:install] Installing ome:test-suite:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 27.94 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.94 
#16 27.94 jars:
#16 27.94 
#16 27.94 copy-jars:
#16 27.94 
#16 27.94 deps-formats-api:
#16 27.98      [echo] isSnapshot = true
#16 28.02 
#16 28.02 install-pom:
#16 28.14 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/pom-bio-formats-8.4.0-SNAPSHOT.pom
#16 28.15 [resolver:install] Installing ome:pom-bio-formats:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 28.15 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 28.15 
#16 28.15 jar-formats-api:
#16 28.23      [echo] isSnapshot = true
#16 28.37 
#16 28.37 init-title:
#16 28.37      [echo] ----------=========== formats-api ===========----------
#16 28.37 
#16 28.37 init-timestamp:
#16 28.37 
#16 28.37 init:
#16 28.37 
#16 28.37 copy-resources:
#16 28.37 
#16 28.37 compile:
#16 28.50 [resolver:resolve] Resolving artifacts
#16 28.51 
#16 28.51 formats-api.jar:
#16 28.53 [resolver:install] Using default POM (ome:formats-api:8.4.0-SNAPSHOT)
#16 28.53 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.pom
#16 28.53 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.jar
#16 28.53 [resolver:install] Installing ome:formats-api:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 28.54 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 28.54 
#16 28.54 deps-turbojpeg:
#16 28.54 
#16 28.54 jar-turbojpeg:
#16 28.62      [echo] isSnapshot = true
#16 28.74 
#16 28.74 init-title:
#16 28.74      [echo] ----------=========== turbojpeg ===========----------
#16 28.74 
#16 28.74 init-timestamp:
#16 28.74 
#16 28.74 init:
#16 28.74 
#16 28.74 copy-resources:
#16 28.74 
#16 28.74 compile:
#16 28.75 [resolver:resolve] Resolving artifacts
#16 28.75 
#16 28.75 jar:
#16 28.76 [resolver:install] Using default POM (ome:turbojpeg:8.4.0-SNAPSHOT)
#16 28.76 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.pom
#16 28.76 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.jar
#16 28.77 [resolver:install] Installing ome:turbojpeg:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 28.77 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 28.77 
#16 28.77 deps-formats-bsd:
#16 28.77 
#16 28.77 jar-formats-bsd:
#16 28.85      [echo] isSnapshot = true
#16 28.97 
#16 28.97 init-title:
#16 28.97      [echo] ----------=========== formats-bsd ===========----------
#16 28.97 
#16 28.97 init-timestamp:
#16 28.97 
#16 28.97 init:
#16 28.97 
#16 28.97 copy-resources:
#16 28.97 
#16 28.97 compile:
#16 29.17 [resolver:resolve] Resolving artifacts
#16 29.18 
#16 29.18 formats-bsd.jar:
#16 29.21 [resolver:install] Using default POM (ome:formats-bsd:8.4.0-SNAPSHOT)
#16 29.22 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.pom
#16 29.22 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.jar
#16 29.22 [resolver:install] Installing ome:formats-bsd:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 29.22 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 29.22 
#16 29.22 deps-formats-gpl:
#16 29.22 
#16 29.22 jar-formats-gpl:
#16 29.30      [echo] isSnapshot = true
#16 29.43 
#16 29.43 init-title:
#16 29.43      [echo] ----------=========== formats-gpl ===========----------
#16 29.43 
#16 29.43 init-timestamp:
#16 29.43 
#16 29.43 init:
#16 29.43 
#16 29.43 copy-resources:
#16 29.43 
#16 29.43 compile:
#16 29.65 [resolver:resolve] Resolving artifacts
#16 29.67 
#16 29.67 formats-gpl.jar:
#16 29.70 [resolver:install] Using default POM (ome:formats-gpl:8.4.0-SNAPSHOT)
#16 29.70 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.pom
#16 29.71 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar
#16 29.71 [resolver:install] Installing ome:formats-gpl:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 29.71 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 29.71 
#16 29.71 deps-bio-formats-plugins:
#16 29.71 
#16 29.71 jar-bio-formats-plugins:
#16 29.79      [echo] isSnapshot = true
#16 29.91 
#16 29.91 init-title:
#16 29.91      [echo] ----------=========== bio-formats_plugins ===========----------
#16 29.91 
#16 29.91 init-timestamp:
#16 29.91 
#16 29.91 init:
#16 29.91 
#16 29.91 copy-resources:
#16 29.91 
#16 29.91 compile:
#16 30.14 [resolver:resolve] Resolving artifacts
#16 30.16 
#16 30.16 bio-formats-plugins.jar:
#16 30.17 [resolver:install] Using default POM (ome:bio-formats_plugins:8.4.0-SNAPSHOT)
#16 30.17 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.pom
#16 30.17 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar
#16 30.17 [resolver:install] Installing ome:bio-formats_plugins:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 30.18 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 30.18 
#16 30.18 deps-bio-formats-tools:
#16 30.18 
#16 30.18 jar-bio-formats-tools:
#16 30.26      [echo] isSnapshot = true
#16 30.44 
#16 30.44 init-title:
#16 30.44      [echo] ----------=========== bio-formats-tools ===========----------
#16 30.44 
#16 30.44 init-timestamp:
#16 30.44 
#16 30.44 init:
#16 30.44 
#16 30.44 copy-resources:
#16 30.44 
#16 30.44 compile:
#16 30.66 [resolver:resolve] Resolving artifacts
#16 30.67 
#16 30.67 bio-formats-tools.jar:
#16 30.68 [resolver:install] Using default POM (ome:bio-formats-tools:8.4.0-SNAPSHOT)
#16 30.68 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.pom
#16 30.68 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar
#16 30.68 [resolver:install] Installing ome:bio-formats-tools:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 30.69 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 30.69 
#16 30.69 deps-tests:
#16 30.69 
#16 30.69 jar-tests:
#16 30.77      [echo] isSnapshot = true
#16 30.89 
#16 30.89 init-title:
#16 30.89      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.89 
#16 30.89 init-timestamp:
#16 30.89 
#16 30.89 init:
#16 30.89 
#16 30.89 copy-resources:
#16 30.89 
#16 30.89 compile:
#16 31.12 [resolver:resolve] Resolving artifacts
#16 31.13 
#16 31.13 tests.jar:
#16 31.14 [resolver:install] Using default POM (ome:test-suite:8.4.0-SNAPSHOT)
#16 31.14 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.pom
#16 31.14 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/test-suite-8.4.0-SNAPSHOT.jar
#16 31.14 [resolver:install] Installing ome:test-suite:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 31.15 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 31.15 
#16 31.15 jars:
#16 31.15 
#16 31.15 tools:
#16 31.15      [echo] ----------=========== bioformats_package ===========----------
#16 31.24      [echo] isSnapshot = true
#16 31.36 
#16 31.36 init-timestamp:
#16 31.36 
#16 31.36 bundle:
#16 31.58 [resolver:resolve] Resolving artifacts
#16 31.59     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.4.0-SNAPSHOT/bio-formats_plugins-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.62     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.1.1-SNAPSHOT/ome-common-6.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.64     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.66     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.67     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.77     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.79     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.84     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.85     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.20.0/jackson-databind-2.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.06     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.20.0/jackson-core-2.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.13     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.20/jackson-annotations-2.20.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.15     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.20     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.21     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.22     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.22     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.37     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.82     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.82     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.82     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.83     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.90     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.90     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.91     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.5.1-SNAPSHOT/ome-xml-6.5.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.96     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.5.1-SNAPSHOT/specification-6.5.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.01     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.4.0-SNAPSHOT/formats-api-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.03     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.1.2-SNAPSHOT/ome-codecs-1.1.2-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.04     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.6-SNAPSHOT/ome-jai-0.1.6-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.16     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.4.0-SNAPSHOT/formats-bsd-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.29     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.4.0-SNAPSHOT/turbojpeg-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.33     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.34     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.18.0/commons-lang3-3.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.43     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.45     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.86     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.88     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.91     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.00     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.02     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.03     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.04     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.25     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.31     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.36     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.4.0-SNAPSHOT/formats-gpl-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.45     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.5-SNAPSHOT/ome-mdbtools-5.3.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.47     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.10-SNAPSHOT/metakit-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.47     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.11-SNAPSHOT/ome-poi-5.3.11-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.58     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.59     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.03     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.04     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.14     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.19     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.20     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.21     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.26     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.29     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.63     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.64     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.65     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.66     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.4.0-SNAPSHOT/bio-formats-tools-8.4.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.67     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.69     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.05     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.15     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.53       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 43.02    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 43.57 [resolver:install] Using default POM (ome:bioformats_package:8.4.0-SNAPSHOT)
#16 43.57 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.4.0-SNAPSHOT/bioformats_package-8.4.0-SNAPSHOT.pom
#16 43.58 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.4.0-SNAPSHOT/bioformats_package-8.4.0-SNAPSHOT.jar
#16 43.62 [resolver:install] Installing ome:bioformats_package:8.4.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.4.0-SNAPSHOT/maven-metadata-local.xml
#16 43.62 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 43.62 
#16 43.62 BUILD SUCCESSFUL
#16 43.62 Total time: 43 seconds
#16 DONE 43.8s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s

#18 exporting to image
#18 exporting layers
#18 exporting layers 4.0s done
#18 writing image sha256:964924a878445caa83246ce53b1b41700c23075fb1824be6e746eb36ba40eeac done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.0s

 1 warning found (use docker --debug to expand):
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS