Started by upstream project "Trigger" build number 3
originally caused by:
Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
> git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
> git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
> git --version # timeout=10
> git --version # 'git version 2.39.2'
> git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
> git config core.sparsecheckout # timeout=10
> git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
> git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
> git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
> git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
> git --version # timeout=10
> git --version # 'git version 2.39.3'
> git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a (refs/remotes/origin/master)
> git rev-parse refs/remotes/origin/master^{commit} # timeout=10
> git config core.sparsecheckout # timeout=10
> git checkout -f 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a # timeout=10
Commit message: "Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7"
> git rev-list --no-walk 2c91b66fcaaca19a4efe830d3c0aa0e23e00537a # timeout=10
Cleaning workspace
> git rev-parse --verify HEAD # timeout=10
Resetting working tree
> git reset --hard # timeout=10
> git clean -fdx # timeout=10
> git submodule foreach --recursive git reset --hard # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 2
[Pipeline] sh
> git submodule foreach --recursive git clean -fdx # timeout=10
> git remote # timeout=10
> git submodule init # timeout=10
> git submodule sync # timeout=10
> git config --get remote.origin.url # timeout=10
> git submodule init # timeout=10
> git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
> git config --get submodule.omero-py.url # timeout=10
> git config -f .gitmodules --get submodule.omero-py.path # timeout=10
> git config --get submodule.omero-web.url # timeout=10
> git config -f .gitmodules --get submodule.omero-web.path # timeout=10
> git config --get submodule.omero-marshal.url # timeout=10
> git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
> git config --get submodule.omero-dropbox.url # timeout=10
> git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
> git config --get submodule.omero-scripts.url # timeout=10
> git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
> git submodule update --init --recursive omero-py # timeout=10
> git submodule update --init --recursive omero-web # timeout=10
> git submodule update --init --recursive omero-marshal # timeout=10
> git submodule update --init --recursive omero-dropbox # timeout=10
> git submodule update --init --recursive omero-scripts # timeout=10
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
Using cached pip-24.0-py3-none-any.whl (2.1 MB)
Installing collected packages: pip
Attempting uninstall: pip
Found existing installation: pip 21.2.3
Uninstalling pip-21.2.3:
Successfully uninstalled pip-21.2.3
Successfully installed pip-24.0
+ python3 -m pip install scc
Collecting scc
Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
Using cached PyGithub-2.2.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
Using cached pycparser-2.21-py2.py3-none-any.whl.metadata (1.1 kB)
Using cached scc-0.19.1-py3-none-any.whl (48 kB)
Using cached PyGithub-2.2.0-py3-none-any.whl (350 kB)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.31.0-py3-none-any.whl (62 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.2.2-py3-none-any.whl (163 kB)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB)
Using cached idna-3.6-py3-none-any.whl (61 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.21-py2.py3-none-any.whl (118 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.2.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.6 pycparser-2.21 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.10.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-03-15 00:32:53,704 [ scc.config] DEBUG Found github.token
2024-03-15 00:32:53,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-03-15 00:32:53,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:32:54,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:32:54,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-03-15 00:32:54,806 [ scc.gh] DEBUG 4996 remaining from 5000 (Reset at 01:03
2024-03-15 00:32:54,807 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:32:54,810 [ scc.git] DEBUG Check current status
2024-03-15 00:32:54,811 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:32:54,814 [ scc.git] DEBUG 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7
2024-03-15 00:32:54,814 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:32:54,854 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350)
2024-03-15 00:32:54,858 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-03-15 00:32:54,861 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6)
2024-03-15 00:32:54,865 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7)
2024-03-15 00:32:54,869 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6)
2024-03-15 00:32:54,875 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:32:55,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-03-15 00:32:55,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:32:56,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:32:56,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:32:57,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:32:57,059 [ scc.git] DEBUG Resetting...
2024-03-15 00:32:57,059 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-03-15 00:32:57,065 [ scc.git] DEBUG HEAD is now at 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7
2024-03-15 00:32:57,065 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-03-15 00:32:57,116 [ scc.git] DEBUG Check current status
2024-03-15 00:32:57,116 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:32:57,120 [ scc.git] DEBUG 2c91b66 Merge pull request #268 from ome/dependabot/submodules/omero-scripts-2078ac7
2024-03-15 00:32:57,120 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:32:57,157 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350)
2024-03-15 00:32:57,160 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-03-15 00:32:57,163 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6)
2024-03-15 00:32:57,166 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7)
2024-03-15 00:32:57,169 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6)
2024-03-15 00:32:57,170 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-03-15 00:32:57,170 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-03-15 00:32:57,170 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-03-15 00:32:57,170 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-03-15 00:32:57,171 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-03-15 00:32:57,171 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:32:57,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-03-15 00:32:57,499 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:32:57,499 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:32:57,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:32:57,503 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-03-15 00:32:57,506 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:32:57,506 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-03-15 00:32:57,510 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-03-15 00:32:57,519 [ scc.git] DEBUG Already up to date.
2024-03-15 00:32:57,519 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:32:57,519 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:32:57,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:32:57,523 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:32:57,562 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:32:57,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:32:57,566 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:32:57,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f06fe722cd0> has no local changes
2024-03-15 00:32:57,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:32:57,624 [ scc.git] DEBUG [detached HEAD 3cdcbb8] merge master -Dorg -Snone
2024-03-15 00:32:57,624 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-03-15 00:32:57,624 [ scc.merge] INFO Already up to date.
2024-03-15 00:32:57,624 [ scc.merge] INFO
2024-03-15 00:32:57,624 [ scc.merge] INFO
2024-03-15 00:32:57,624 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-03-15 00:32:57,624 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-web': checked out 'eec0fd18a86f1105325281178112dcb7c7b48fea'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-03-15 00:33:00,327 [ scc.config] DEBUG Found github.token
2024-03-15 00:33:00,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-03-15 00:33:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:33:01,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:33:01,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-03-15 00:33:01,426 [ scc.gh] DEBUG 4988 remaining from 5000 (Reset at 01:03
2024-03-15 00:33:01,427 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:33:01,431 [ scc.git] DEBUG Check current status
2024-03-15 00:33:01,431 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:01,435 [ scc.git] DEBUG 3cdcbb8 merge master -Dorg -Snone
2024-03-15 00:33:01,436 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:01,476 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350)
2024-03-15 00:33:01,479 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-03-15 00:33:01,482 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6)
2024-03-15 00:33:01,486 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7)
2024-03-15 00:33:01,489 [ scc.git] DEBUG +eec0fd18a86f1105325281178112dcb7c7b48fea omero-web (v5.25.0-1-geec0fd18a)
2024-03-15 00:33:01,494 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:33:01,494 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-03-15 00:33:01,496 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-03-15 00:33:01,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-03-15 00:33:02,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:33:02,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:33:03,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:33:03,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:33:03,640 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:03,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-03-15 00:33:03,686 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:33:03,691 [ scc.git] DEBUG Check current status
2024-03-15 00:33:03,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:03,695 [ scc.git] DEBUG 5863350 Merge pull request #22 from sbesson/python311
2024-03-15 00:33:03,695 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:03,736 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:33:04,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-03-15 00:33:04,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:33:05,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:33:05,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:33:05,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:33:05,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:05,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:05,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-03-15 00:33:05,960 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:33:05,963 [ scc.git] DEBUG Check current status
2024-03-15 00:33:05,964 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:05,967 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-03-15 00:33:05,967 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:06,005 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:33:06,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-03-15 00:33:06,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:33:07,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:33:07,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:33:08,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:33:08,085 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:08,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:08,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-03-15 00:33:08,125 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:33:08,129 [ scc.git] DEBUG Check current status
2024-03-15 00:33:08,130 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:08,134 [ scc.git] DEBUG 0dc60bd6 Bump version: 5.19.0 → 5.19.1.dev0
2024-03-15 00:33:08,134 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:08,181 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:33:08,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-03-15 00:33:09,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:33:09,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:33:09,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:33:10,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:33:10,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:10,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:10,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-03-15 00:33:10,380 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:33:10,384 [ scc.git] DEBUG Check current status
2024-03-15 00:33:10,384 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:10,388 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0
2024-03-15 00:33:10,389 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:10,444 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:33:10,445 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-03-15 00:33:10,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-03-15 00:33:11,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:33:11,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:33:12,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:33:12,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:33:12,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:12,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:12,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-03-15 00:33:12,629 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-03-15 00:33:12,634 [ scc.git] DEBUG Check current status
2024-03-15 00:33:12,634 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:12,639 [ scc.git] DEBUG eec0fd18a Bump version: 5.25.0 → 5.25.1.dev0
2024-03-15 00:33:12,639 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:12,684 [ scc.config] DEBUG Found remote.origin.url
2024-03-15 00:33:13,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-03-15 00:33:13,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-03-15 00:33:13,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-03-15 00:33:14,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-03-15 00:33:14,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-03-15 00:33:14,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:14,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:14,904 [ scc.git] DEBUG Resetting...
2024-03-15 00:33:14,904 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-03-15 00:33:14,910 [ scc.git] DEBUG HEAD is now at 3cdcbb8 merge master -Dorg -Snone
2024-03-15 00:33:14,910 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-03-15 00:33:14,968 [ scc.git] DEBUG Submodule path 'omero-web': checked out '99aebd2a6bc892db0ac38f791821f17886a59095'
2024-03-15 00:33:14,971 [ scc.git] DEBUG Check current status
2024-03-15 00:33:14,971 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-03-15 00:33:14,975 [ scc.git] DEBUG 3cdcbb8 merge master -Dorg -Snone
2024-03-15 00:33:14,975 [ scc.git] DEBUG Calling 'git submodule status'
2024-03-15 00:33:15,012 [ scc.git] DEBUG 586335057cf72cce7df48fd2b99f124a26100deb omero-dropbox (v5.6.0-54-g5863350)
2024-03-15 00:33:15,014 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-03-15 00:33:15,017 [ scc.git] DEBUG 0dc60bd67a5f9281e2063a0a3aeeaa119c14447d omero-py (v5.19.0-1-g0dc60bd6)
2024-03-15 00:33:15,021 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d omero-scripts (v5.8.0-1-g2078ac7)
2024-03-15 00:33:15,024 [ scc.git] DEBUG 99aebd2a6bc892db0ac38f791821f17886a59095 omero-web (v5.24.0-41-g99aebd2a6)
2024-03-15 00:33:15,025 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-03-15 00:33:15,025 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-03-15 00:33:15,025 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-03-15 00:33:15,025 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-03-15 00:33:15,025 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-03-15 00:33:15,025 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-03-15 00:33:15,025 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:33:15,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-03-15 00:33:15,312 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:33:15,312 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:15,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:15,317 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-03-15 00:33:15,322 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:33:15,323 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-03-15 00:33:15,328 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-03-15 00:33:15,334 [ scc.git] DEBUG Already up to date.
2024-03-15 00:33:15,335 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:33:15,335 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:15,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:15,340 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:33:15,384 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:15,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:15,389 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:33:15,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-03-15 00:33:16,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23 HTTP/1.1" 200 None
2024-03-15 00:33:16,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/23/comments HTTP/1.1" 200 None
2024-03-15 00:33:17,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c HTTP/1.1" 200 None
2024-03-15 00:33:17,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:18,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:33:18,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/c388b0d9ede0607a3d83da9b59fb52134d361e5c HTTP/1.1" 200 None
2024-03-15 00:33:19,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/c388b0d9ede0607a3d83da9b59fb52134d361e5c?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:33:19,278 [ scc.repo] DEBUG - PR 23 sbesson 'Remove python-future compatibility code'
2024-03-15 00:33:19,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-03-15 00:33:20,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-03-15 00:33:20,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-03-15 00:33:21,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:21,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-03-15 00:33:22,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:33:22,125 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-03-15 00:33:22,125 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:33:22,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-03-15 00:33:22,125 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:22,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:22,132 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-03-15 00:33:22,137 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:33:22,137 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-03-15 00:33:22,143 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-03-15 00:33:22,149 [ scc.git] DEBUG Already up to date.
2024-03-15 00:33:22,149 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-03-15 00:33:22,589 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-03-15 00:33:22,589 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-03-15 00:33:22,594 [ scc.git] DEBUG Calling 'git fetch origin pull/23/head'
2024-03-15 00:33:23,150 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-03-15 00:33:23,150 [ scc.git] DEBUG * branch refs/pull/23/head -> FETCH_HEAD
2024-03-15 00:33:23,156 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:33:23,156 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:23,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:23,162 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-03-15 00:33:23,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:23,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-03-15 00:33:23,308 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:33:23,317 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-03-15 00:33:23,317 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-03-15 00:33:23,317 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-03-15 00:33:23,317 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-03-15 00:33:23,317 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-03-15 00:33:23,317 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-03-15 00:33:23,318 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-03-15 00:33:23,323 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-03-15 00:33:23,323 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-03-15 00:33:23,323 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-03-15 00:33:23,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:33:23,526 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c388b0d9ede0607a3d83da9b59fb52134d361e5c'
2024-03-15 00:33:23,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:23,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 23 (Remove python-future compatibility code) c388b0d9ede0607a3d83da9b59fb52134d361e5c'
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-03-15 00:33:23,566 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:33:23,574 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-03-15 00:33:23,574 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 +--
2024-03-15 00:33:23,574 [ scc.git] DEBUG .github/workflows/tox.yml | 5 ++--
2024-03-15 00:33:23,574 [ scc.git] DEBUG Dockerfile | 32 ----------------------
2024-03-15 00:33:23,574 [ scc.git] DEBUG setup.py | 2 +-
2024-03-15 00:33:23,574 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 1 -
2024-03-15 00:33:23,574 [ scc.git] DEBUG src/fsDirectory.py | 8 +-----
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsDropBox.py | 8 +-----
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsDropBoxMonitorClient.py | 11 +-------
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsFileServer.py | 12 ++-------
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsLists.py | 2 --
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 9 +------
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsMonitor.py | 2 --
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsMonitorServer.py | 8 +++---
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsNotificationScheduler.py | 3 ---
2024-03-15 00:33:23,575 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 21 +++++----------
2024-03-15 00:33:23,576 [ scc.git] DEBUG src/fsUtil.py | 9 +++----
2024-03-15 00:33:23,576 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 8 +-----
2024-03-15 00:33:23,576 [ scc.git] DEBUG test/conftest.py | 2 --
2024-03-15 00:33:23,576 [ scc.git] DEBUG test/drivers.py | 17 +++---------
2024-03-15 00:33:23,576 [ scc.git] DEBUG test/unit/test_drivers.py | 55 ++++++++++++++++----------------------
2024-03-15 00:33:23,576 [ scc.git] DEBUG test/unit/test_monitor.py | 2 --
2024-03-15 00:33:23,576 [ scc.git] DEBUG test/unit/test_replay.py | 8 +-----
2024-03-15 00:33:23,576 [ scc.git] DEBUG test/unit/test_state.py | 1 -
2024-03-15 00:33:23,576 [ scc.git] DEBUG tox.ini | 3 ++-
2024-03-15 00:33:23,576 [ scc.git] DEBUG 25 files changed, 57 insertions(+), 178 deletions(-)
2024-03-15 00:33:23,576 [ scc.git] DEBUG delete mode 100644 Dockerfile
2024-03-15 00:33:23,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:33:23,938 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:33:23,988 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:23,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:23,997 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:24,041 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:33:24,051 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc7eb648c40> has no local changes
2024-03-15 00:33:24,052 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
- PR 23 sbesson 'Remove python-future compatibility code'
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:33:24,064 [ scc.git] DEBUG [detached HEAD 4d03860] merge master -Dorg -Ssuccess-only
2024-03-15 00:33:24,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:24,064 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:33:24,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-03-15 00:33:24,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-03-15 00:33:25,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-03-15 00:33:26,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-03-15 00:33:26,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:27,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:33:27,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-03-15 00:33:28,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:33:28,071 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-03-15 00:33:28,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-03-15 00:33:29,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-03-15 00:33:29,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-03-15 00:33:29,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-03-15 00:33:29,936 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:33:29,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-03-15 00:33:29,936 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:29,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:29,944 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-03-15 00:33:29,949 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:33:29,949 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-03-15 00:33:29,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-03-15 00:33:29,959 [ scc.git] DEBUG Already up to date.
2024-03-15 00:33:29,959 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-03-15 00:33:30,420 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-03-15 00:33:30,421 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-03-15 00:33:30,425 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:33:30,425 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:30,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:30,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-03-15 00:33:30,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:30,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-03-15 00:33:30,456 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-03-15 00:33:30,456 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:33:30,459 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-03-15 00:33:30,459 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-03-15 00:33:30,459 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-03-15 00:33:30,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:33:30,625 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:33:30,666 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:33:30,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:33:30,671 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:33:30,712 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:33:30,718 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc7ed8aeca0> has no local changes
2024-03-15 00:33:30,719 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:33:30,727 [ scc.git] DEBUG [detached HEAD d35ccf6] merge master -Dorg -Ssuccess-only
2024-03-15 00:33:30,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:33:30,728 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:33:31,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-03-15 00:33:31,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400 HTTP/1.1" 200 None
2024-03-15 00:33:32,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/400/comments HTTP/1.1" 200 None
2024-03-15 00:33:32,333 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-03-15 00:33:32,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/398 HTTP/1.1" 200 None
2024-03-15 00:33:33,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2 HTTP/1.1" 200 None
2024-03-15 00:33:33,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:34,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:33:34,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2 HTTP/1.1" 200 None
2024-03-15 00:33:35,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/9013e726380603c0f058e164320548872a8cd7d2?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:35,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2 HTTP/1.1" 200 None
2024-03-15 00:33:36,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9013e726380603c0f058e164320548872a8cd7d2/status HTTP/1.1" 200 None
2024-03-15 00:33:36,117 [ scc.repo] DEBUG - PR 398 will-moore 'getGridSize() handles plates with no Wells'
2024-03-15 00:33:36,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-03-15 00:33:37,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-03-15 00:33:37,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-03-15 00:33:38,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:38,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:33:38,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394 HTTP/1.1" 200 None
2024-03-15 00:33:39,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/394/comments HTTP/1.1" 200 None
2024-03-15 00:33:39,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-03-15 00:33:40,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-03-15 00:33:40,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:41,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:33:41,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-03-15 00:33:42,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:42,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-03-15 00:33:43,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-03-15 00:33:43,187 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-03-15 00:33:43,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-03-15 00:33:43,629 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-03-15 00:33:44,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-03-15 00:33:44,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-03-15 00:33:45,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-03-15 00:33:45,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-03-15 00:33:45,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-03-15 00:33:46,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:46,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-03-15 00:33:47,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:33:47,266 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-03-15 00:33:47,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-03-15 00:33:48,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-03-15 00:33:48,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-03-15 00:33:49,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:49,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:33:50,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-03-15 00:33:50,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:51,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-03-15 00:33:51,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-03-15 00:33:51,438 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-03-15 00:33:51,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-03-15 00:33:52,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-03-15 00:33:52,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-03-15 00:33:53,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-03-15 00:33:53,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-03-15 00:33:54,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:54,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-03-15 00:33:55,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:33:55,259 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-03-15 00:33:55,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-03-15 00:33:56,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-03-15 00:33:56,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:33:57,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-03-15 00:33:57,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:33:57,604 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-03-15 00:33:58,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-03-15 00:33:58,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-03-15 00:33:59,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-03-15 00:33:59,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:00,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-03-15 00:34:00,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:34:00,732 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-03-15 00:34:01,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-03-15 00:34:01,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-03-15 00:34:02,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-03-15 00:34:02,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:03,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-03-15 00:34:03,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:34:03,490 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-03-15 00:34:03,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-03-15 00:34:04,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-03-15 00:34:04,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-03-15 00:34:05,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-03-15 00:34:05,363 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:34:05,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-03-15 00:34:05,363 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:05,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:05,368 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-03-15 00:34:05,373 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:34:05,373 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-03-15 00:34:05,378 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-03-15 00:34:05,384 [ scc.git] DEBUG Already up to date.
2024-03-15 00:34:05,384 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-03-15 00:34:05,839 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:05,839 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-03-15 00:34:05,844 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-03-15 00:34:06,301 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:06,301 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-03-15 00:34:06,308 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-03-15 00:34:06,737 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:06,738 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-03-15 00:34:06,747 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-03-15 00:34:07,163 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:07,163 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-03-15 00:34:07,169 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-03-15 00:34:07,623 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:07,623 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-03-15 00:34:07,630 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-03-15 00:34:08,012 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:08,012 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-03-15 00:34:08,019 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-03-15 00:34:08,418 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:08,419 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-03-15 00:34:08,424 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head'
2024-03-15 00:34:08,879 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-03-15 00:34:08,879 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD
2024-03-15 00:34:08,884 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:34:08,885 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:08,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:08,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-03-15 00:34:08,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:08,905 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-03-15 00:34:08,935 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-03-15 00:34:08,935 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-03-15 00:34:08,937 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:08,941 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-03-15 00:34:08,941 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-03-15 00:34:08,941 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-03-15 00:34:09,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:09,107 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-03-15 00:34:09,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:09,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-03-15 00:34:09,224 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-03-15 00:34:09,225 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-03-15 00:34:09,225 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:09,235 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-03-15 00:34:09,235 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-03-15 00:34:09,235 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-03-15 00:34:09,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:09,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-03-15 00:34:09,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:09,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-03-15 00:34:09,569 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-03-15 00:34:09,570 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:09,574 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-03-15 00:34:09,574 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-03-15 00:34:09,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:09,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-03-15 00:34:09,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:09,939 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-03-15 00:34:10,001 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-03-15 00:34:10,001 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-03-15 00:34:10,002 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:10,006 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-03-15 00:34:10,006 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-03-15 00:34:10,006 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-03-15 00:34:10,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:10,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-03-15 00:34:10,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:10,369 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-03-15 00:34:10,390 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:10,393 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-03-15 00:34:10,393 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-03-15 00:34:10,393 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-03-15 00:34:10,393 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-03-15 00:34:10,394 [ scc.git] DEBUG create mode 100644 connect.py
2024-03-15 00:34:10,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:10,759 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-03-15 00:34:10,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:10,777 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-03-15 00:34:10,795 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-03-15 00:34:10,796 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:10,799 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-03-15 00:34:10,800 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-03-15 00:34:11,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:11,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-03-15 00:34:11,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:11,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-03-15 00:34:11,232 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-03-15 00:34:11,233 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:11,237 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-03-15 00:34:11,237 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-03-15 00:34:11,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:11,589 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9013e726380603c0f058e164320548872a8cd7d2'
2024-03-15 00:34:11,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:11,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 398 (getGridSize() handles plates with no Wells) 9013e726380603c0f058e164320548872a8cd7d2'
2024-03-15 00:34:11,655 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-03-15 00:34:11,656 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:11,664 [ scc.git] DEBUG src/omero/gateway/__init__.py | 5 ++++-
2024-03-15 00:34:11,664 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 1 deletion(-)
2024-03-15 00:34:12,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:12,041 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:34:12,081 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:12,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:12,089 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:34:12,136 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:34:12,145 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc7ea5b7f10> has no local changes
2024-03-15 00:34:12,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 400 jburel 'Session ID and constructor' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 398 will-moore 'getGridSize() handles plates with no Wells'
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:34:12,154 [ scc.git] DEBUG [detached HEAD a134c8a3] merge master -Dorg -Ssuccess-only
2024-03-15 00:34:12,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:34:12,154 [ scc.git] INFO Overriding base-branch from master to develop
2024-03-15 00:34:12,154 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:34:12,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-03-15 00:34:13,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-03-15 00:34:13,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-03-15 00:34:14,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-03-15 00:34:14,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-03-15 00:34:15,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-03-15 00:34:15,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-03-15 00:34:16,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-03-15 00:34:16,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:17,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-03-15 00:34:17,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:34:17,588 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-03-15 00:34:18,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-03-15 00:34:18,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-03-15 00:34:19,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-03-15 00:34:19,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-03-15 00:34:19,587 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:34:19,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-03-15 00:34:19,587 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:19,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:19,592 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-03-15 00:34:19,596 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:34:19,597 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-03-15 00:34:19,601 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-03-15 00:34:19,605 [ scc.git] DEBUG Already up to date.
2024-03-15 00:34:19,606 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-03-15 00:34:20,063 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-03-15 00:34:20,063 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-03-15 00:34:20,069 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:34:20,069 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:20,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:20,074 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-03-15 00:34:20,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:20,086 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-03-15 00:34:20,126 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-03-15 00:34:20,126 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-03-15 00:34:20,126 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-03-15 00:34:20,126 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-03-15 00:34:20,131 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d'
2024-03-15 00:34:20,138 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0
2024-03-15 00:34:20,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:20,293 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-03-15 00:34:20,299 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d'
2024-03-15 00:34:20,304 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#2](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-03-15 00:34:20,309 [ scc.config] DEBUG Found github.token
2024-03-15 00:34:20,309 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-03-15 00:34:20,309 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:34:20,353 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:20,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:20,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:34:20,405 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:34:20,411 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc7ea5928b0> has no local changes
2024-03-15 00:34:20,411 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:34:20,419 [ scc.git] DEBUG [detached HEAD b256e4e] merge master -Dorg -Ssuccess-only
2024-03-15 00:34:20,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:34:20,420 [ scc.repo] DEBUG ## PRs found:
2024-03-15 00:34:20,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-03-15 00:34:21,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/543 HTTP/1.1" 200 None
2024-03-15 00:34:21,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542 HTTP/1.1" 200 None
2024-03-15 00:34:22,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/542/comments HTTP/1.1" 200 None
2024-03-15 00:34:22,358 [ scc.repo] DEBUG # ... Include label: include
2024-03-15 00:34:22,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5 HTTP/1.1" 200 None
2024-03-15 00:34:23,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:23,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:34:24,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5 HTTP/1.1" 200 None
2024-03-15 00:34:24,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a2f7881214d23695413a1ee62e262b1d286ed2f5?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:25,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5 HTTP/1.1" 200 None
2024-03-15 00:34:25,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a2f7881214d23695413a1ee62e262b1d286ed2f5/status HTTP/1.1" 200 None
2024-03-15 00:34:25,690 [ scc.repo] DEBUG - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
2024-03-15 00:34:26,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/540 HTTP/1.1" 200 None
2024-03-15 00:34:26,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None
2024-03-15 00:34:27,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:27,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:34:28,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None
2024-03-15 00:34:28,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/ee785db51c334b1be62c14ab36414993a2319a30?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:29,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30 HTTP/1.1" 200 None
2024-03-15 00:34:29,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/ee785db51c334b1be62c14ab36414993a2319a30/status HTTP/1.1" 200 None
2024-03-15 00:34:29,442 [ scc.repo] DEBUG - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES'
2024-03-15 00:34:29,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536 HTTP/1.1" 200 None
2024-03-15 00:34:30,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/536/comments HTTP/1.1" 200 None
2024-03-15 00:34:30,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None
2024-03-15 00:34:31,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:31,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:34:32,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None
2024-03-15 00:34:32,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8a41f2f47426759218ab74359c02a7126a10e6eb?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:33,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb HTTP/1.1" 200 None
2024-03-15 00:34:33,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a41f2f47426759218ab74359c02a7126a10e6eb/status HTTP/1.1" 200 None
2024-03-15 00:34:33,717 [ scc.repo] DEBUG - PR 536 will-moore 'imgData JSON with no stateful services'
2024-03-15 00:34:34,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-03-15 00:34:34,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-03-15 00:34:35,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-03-15 00:34:35,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-03-15 00:34:36,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:36,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:34:37,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-03-15 00:34:37,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:37,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-03-15 00:34:38,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-03-15 00:34:38,402 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-03-15 00:34:38,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/533 HTTP/1.1" 200 None
2024-03-15 00:34:39,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None
2024-03-15 00:34:39,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:40,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:34:40,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None
2024-03-15 00:34:41,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/e335980be1e7197826687f6c322a60c61b4aa545?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:41,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545 HTTP/1.1" 200 None
2024-03-15 00:34:42,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e335980be1e7197826687f6c322a60c61b4aa545/status HTTP/1.1" 200 None
2024-03-15 00:34:42,247 [ scc.repo] DEBUG - PR 533 jburel 'use conda-forge channel'
2024-03-15 00:34:42,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-03-15 00:34:43,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-03-15 00:34:43,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-03-15 00:34:44,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:44,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-03-15 00:34:45,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-03-15 00:34:45,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:45,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-03-15 00:34:46,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-03-15 00:34:46,404 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-03-15 00:34:46,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/399 HTTP/1.1" 200 None
2024-03-15 00:34:47,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225 HTTP/1.1" 200 None
2024-03-15 00:34:47,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/225/comments HTTP/1.1" 200 None
2024-03-15 00:34:48,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/200678050/issues/225/comments?page=2 HTTP/1.1" 200 None
2024-03-15 00:34:48,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-03-15 00:34:49,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-03-15 00:34:49,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None
2024-03-15 00:34:50,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-03-15 00:34:50,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/219d9e721304a4c46b4d73ef9ff3777549d69615 HTTP/1.1" 200 None
2024-03-15 00:34:51,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/219d9e721304a4c46b4d73ef9ff3777549d69615?per_page=1 HTTP/1.1" 200 2
2024-03-15 00:34:51,295 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler'
2024-03-15 00:34:51,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17 HTTP/1.1" 200 None
2024-03-15 00:34:52,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/17/comments HTTP/1.1" 200 None
2024-03-15 00:34:52,244 [ scc.repo] DEBUG ## Branches found:
2024-03-15 00:34:52,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-03-15 00:34:52,244 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:52,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:52,249 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-03-15 00:34:52,253 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-03-15 00:34:52,253 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-03-15 00:34:52,258 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-03-15 00:34:52,270 [ scc.git] DEBUG Updating 99aebd2a6..eec0fd18a
2024-03-15 00:34:52,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/538 HTTP/1.1" 200 None
2024-03-15 00:34:52,927 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head'
2024-03-15 00:34:53,499 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:53,500 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD
2024-03-15 00:34:53,505 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-03-15 00:34:53,917 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:53,917 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-03-15 00:34:53,921 [ scc.git] DEBUG Calling 'git fetch origin pull/533/head'
2024-03-15 00:34:54,315 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:54,315 [ scc.git] DEBUG * branch refs/pull/533/head -> FETCH_HEAD
2024-03-15 00:34:54,320 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-03-15 00:34:54,730 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:54,730 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-03-15 00:34:54,735 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head'
2024-03-15 00:34:55,203 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:55,203 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD
2024-03-15 00:34:55,208 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head'
2024-03-15 00:34:55,600 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:55,600 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD
2024-03-15 00:34:55,607 [ scc.git] DEBUG Calling 'git fetch origin pull/542/head'
2024-03-15 00:34:56,148 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-03-15 00:34:56,149 [ scc.git] DEBUG * branch refs/pull/542/head -> FETCH_HEAD
2024-03-15 00:34:56,154 [ scc.git] DEBUG ## Unique users: []
2024-03-15 00:34:56,154 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:56,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:56,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...219d9e721304a4c46b4d73ef9ff3777549d69615'
2024-03-15 00:34:56,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:56,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 219d9e721304a4c46b4d73ef9ff3777549d69615'
2024-03-15 00:34:56,216 [ scc.git] DEBUG Auto-merging test/unit/test_web.py
2024-03-15 00:34:56,216 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/unit/test_web.py
2024-03-15 00:34:56,216 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-03-15 00:34:56,217 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-03-15 00:34:56,225 [ scc.git] DEBUG Calling 'git reset --hard eec0fd18a86f1105325281178112dcb7c7b48fea'
2024-03-15 00:34:56,235 [ scc.git] DEBUG HEAD is now at eec0fd18a Bump version: 5.25.0 → 5.25.1.dev0
2024-03-15 00:34:56,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:56,403 [ scc.git] DEBUG Calling 'git merge-base eec0fd18a86f1105325281178112dcb7c7b48fea 219d9e721304a4c46b4d73ef9ff3777549d69615'
2024-03-15 00:34:56,422 [ scc.git] DEBUG Calling 'git diff --name-only 632d14a9cab5319c6b1bd9190d441a95e457103b..eec0fd18a86f1105325281178112dcb7c7b48fea'
2024-03-15 00:34:56,513 [ scc.git] INFO - PR 168 stick 'Changes to nginx @maintenance handler'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#2](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/consoleText) for more details.
Possible conflicts:
- Upstream changes
- test/unit/test_web.py
--conflicts
2024-03-15 00:34:56,518 [ scc.config] DEBUG Found github.token
2024-03-15 00:34:56,518 [ scc.git] DEBUG Not adding comment to issue #168, already --conflicts.
2024-03-15 00:34:56,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-03-15 00:34:56,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:56,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-03-15 00:34:56,563 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-03-15 00:34:56,563 [ scc.git] DEBUG Auto-merging setup.py
2024-03-15 00:34:56,564 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:56,567 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-03-15 00:34:56,567 [ scc.git] DEBUG setup.py | 1 +
2024-03-15 00:34:56,567 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-03-15 00:34:56,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:56,816 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e335980be1e7197826687f6c322a60c61b4aa545'
2024-03-15 00:34:56,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:56,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 533 (use conda-forge channel) e335980be1e7197826687f6c322a60c61b4aa545'
2024-03-15 00:34:56,845 [ scc.git] DEBUG Auto-merging README.rst
2024-03-15 00:34:56,846 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:56,849 [ scc.git] DEBUG README.rst | 3 +--
2024-03-15 00:34:56,849 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 2 deletions(-)
2024-03-15 00:34:57,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:57,289 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-03-15 00:34:57,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:57,300 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-03-15 00:34:57,322 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-03-15 00:34:57,322 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-03-15 00:34:57,323 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:57,327 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-03-15 00:34:57,327 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-03-15 00:34:57,327 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-03-15 00:34:57,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:57,697 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a41f2f47426759218ab74359c02a7126a10e6eb'
2024-03-15 00:34:57,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:57,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (imgData JSON with no stateful services) 8a41f2f47426759218ab74359c02a7126a10e6eb'
2024-03-15 00:34:57,745 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2024-03-15 00:34:57,745 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-03-15 00:34:57,746 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:57,751 [ scc.git] DEBUG omeroweb/webclient/views.py | 4 +-
2024-03-15 00:34:57,751 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 182 ++++++++++++++++++++++++++++++++---------
2024-03-15 00:34:57,751 [ scc.git] DEBUG omeroweb/webgateway/util.py | 38 +++++++++
2024-03-15 00:34:57,751 [ scc.git] DEBUG 3 files changed, 185 insertions(+), 39 deletions(-)
2024-03-15 00:34:58,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:58,103 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ee785db51c334b1be62c14ab36414993a2319a30'
2024-03-15 00:34:58,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:58,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Add 'django.template.context_processors.request' to TEMPLATES) ee785db51c334b1be62c14ab36414993a2319a30'
2024-03-15 00:34:58,135 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-03-15 00:34:58,136 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:58,140 [ scc.git] DEBUG omeroweb/settings.py | 1 +
2024-03-15 00:34:58,140 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-03-15 00:34:58,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:58,515 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a2f7881214d23695413a1ee62e262b1d286ed2f5'
2024-03-15 00:34:58,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:58,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 542 (PlateAcquisition filtering with plate display) a2f7881214d23695413a1ee62e262b1d286ed2f5'
2024-03-15 00:34:58,572 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2024-03-15 00:34:58,573 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-03-15 00:34:58,581 [ scc.git] DEBUG .../data/includes/center_plugin.thumbs.js.html | 13 ++++--------
2024-03-15 00:34:58,581 [ scc.git] DEBUG .../webclient/templates/webclient/data/plate.html | 10 ++++-----
2024-03-15 00:34:58,581 [ scc.git] DEBUG omeroweb/webclient/views.py | 17 +++++++++++++++
2024-03-15 00:34:58,581 [ scc.git] DEBUG omeroweb/webgateway/plategrid.py | 24 +++++++++++++++++++---
2024-03-15 00:34:58,581 [ scc.git] DEBUG .../static/webgateway/js/ome.plateview.js | 15 ++++++++------
2024-03-15 00:34:58,581 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 2 +-
2024-03-15 00:34:58,581 [ scc.git] DEBUG omeroweb/webgateway/views.py | 9 ++++++--
2024-03-15 00:34:58,581 [ scc.git] DEBUG 7 files changed, 64 insertions(+), 26 deletions(-)
2024-03-15 00:34:58,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:58,944 [ scc.git] DEBUG Calling 'git submodule update'
2024-03-15 00:34:58,984 [ scc.git] DEBUG Get sha1 of %s
2024-03-15 00:34:58,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-03-15 00:34:58,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:34:59,030 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:34:59,042 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc7e9558430> has no local changes
2024-03-15 00:34:59,042 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft)
- PR 225 will-moore 'Query string ids' (exclude comment)
- PR 17 will-moore 'Right panel performance fixes' (exclude comment)
Updating 99aebd2a6..eec0fd18a
Previously merged:
- PR 538 knabar 'Change log for 5.25.0'
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 533 jburel 'use conda-forge channel'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 536 will-moore 'imgData JSON with no stateful services'
- PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES'
- PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
Conflicting PRs (not included):
- PR 168 stick 'Changes to nginx @maintenance handler'
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:34:59,054 [ scc.git] DEBUG [detached HEAD bc22bc1c8] merge master -Dorg -Ssuccess-only
2024-03-15 00:34:59,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:34:59,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-03-15 00:34:59,105 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-03-15 00:34:59,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:59,361 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-03-15 00:34:59,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:34:59,774 [ scc.config] DEBUG Found submodule.omero-py.url
2024-03-15 00:35:00,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:35:00,174 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-03-15 00:35:00,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:35:00,579 [ scc.config] DEBUG Found submodule.omero-web.url
2024-03-15 00:35:00,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-03-15 00:35:00,983 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-03-15 00:35:01,012 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc7eb8eda30> has local changes
2024-03-15 00:35:01,012 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
- PR 23 sbesson 'Remove python-future compatibility code'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 400 jburel 'Session ID and constructor' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 398 will-moore 'getGridSize() handles plates with no Wells'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft)
- PR 225 will-moore 'Query string ids' (exclude comment)
- PR 17 will-moore 'Right panel performance fixes' (exclude comment)
Updating 99aebd2a6..eec0fd18a
Previously merged:
- PR 538 knabar 'Change log for 5.25.0'
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 533 jburel 'use conda-forge channel'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 536 will-moore 'imgData JSON with no stateful services'
- PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES'
- PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
Conflicting PRs (not included):
- PR 168 stick 'Changes to nginx @maintenance handler'
Generated by OMERO-python-superbuild-push#2 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/2/)'
2024-03-15 00:35:01,022 [ scc.git] DEBUG [detached HEAD 6749313] merge master -Dorg -Ssuccess-only
2024-03-15 00:35:01,022 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-03-15 00:35:01,022 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-03-15 00:35:01,023 [ scc.merge] INFO Already up to date.
2024-03-15 00:35:01,023 [ scc.merge] INFO
2024-03-15 00:35:01,023 [ scc.merge] INFO
2024-03-15 00:35:01,023 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-03-15 00:35:01,023 [ scc.merge] INFO Already up to date.
2024-03-15 00:35:01,023 [ scc.merge] INFO
2024-03-15 00:35:01,023 [ scc.merge] INFO Merged PRs:
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 23 sbesson 'Remove python-future compatibility code'
2024-03-15 00:35:01,023 [ scc.merge] INFO
2024-03-15 00:35:01,023 [ scc.merge] INFO Repository: ome/omero-marshal
2024-03-15 00:35:01,023 [ scc.merge] INFO Excluded PRs:
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-03-15 00:35:01,023 [ scc.merge] INFO Already up to date.
2024-03-15 00:35:01,023 [ scc.merge] INFO
2024-03-15 00:35:01,023 [ scc.merge] INFO Merged PRs:
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-03-15 00:35:01,023 [ scc.merge] INFO
2024-03-15 00:35:01,023 [ scc.merge] INFO Repository: ome/omero-py
2024-03-15 00:35:01,023 [ scc.merge] INFO Excluded PRs:
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 400 jburel 'Session ID and constructor' (label: exclude)
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 394 jo-mueller 'added `_repr_html_` method for `_ImageWrapper`' (user: jo-mueller)
2024-03-15 00:35:01,023 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-03-15 00:35:01,024 [ scc.merge] INFO Already up to date.
2024-03-15 00:35:01,024 [ scc.merge] INFO
2024-03-15 00:35:01,024 [ scc.merge] INFO Merged PRs:
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 398 will-moore 'getGridSize() handles plates with no Wells'
2024-03-15 00:35:01,024 [ scc.merge] INFO
2024-03-15 00:35:01,024 [ scc.merge] INFO Repository: ome/omero-scripts
2024-03-15 00:35:01,024 [ scc.merge] INFO Excluded PRs:
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-03-15 00:35:01,024 [ scc.merge] INFO Already up to date.
2024-03-15 00:35:01,024 [ scc.merge] INFO
2024-03-15 00:35:01,024 [ scc.merge] INFO Conflicting PRs (not included):
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-03-15 00:35:01,024 [ scc.merge] INFO
2024-03-15 00:35:01,024 [ scc.merge] INFO Repository: ome/omero-web
2024-03-15 00:35:01,024 [ scc.merge] INFO Excluded PRs:
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 543 knabar 'Make long-running tasks like "Save to all" more robust' (stage: draft)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 399 will-moore 'Handle chgrp dry-run LogicalChannel[ID] to show images' (stage: draft)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 225 will-moore 'Query string ids' (exclude comment)
2024-03-15 00:35:01,024 [ scc.merge] INFO - PR 17 will-moore 'Right panel performance fixes' (exclude comment)
2024-03-15 00:35:01,025 [ scc.merge] INFO Updating 99aebd2a6..eec0fd18a
2024-03-15 00:35:01,025 [ scc.merge] INFO Previously merged:
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 538 knabar 'Change log for 5.25.0'
2024-03-15 00:35:01,025 [ scc.merge] INFO
2024-03-15 00:35:01,025 [ scc.merge] INFO Merged PRs:
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel'
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 536 will-moore 'imgData JSON with no stateful services'
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 540 will-moore 'Add 'django.template.context_processors.request' to TEMPLATES'
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
2024-03-15 00:35:01,025 [ scc.merge] INFO
2024-03-15 00:35:01,025 [ scc.merge] INFO Conflicting PRs (not included):
2024-03-15 00:35:01,025 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler'
2024-03-15 00:35:01,025 [ scc.merge] INFO
2024-03-15 00:35:01,025 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-03-15 00:35:01,025 [ scc.git] DEBUG Calling 'git remote'
2024-03-15 00:35:01,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-03-15 00:35:01,030 [ scc.git] DEBUG Calling 'git remote'
2024-03-15 00:35:01,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:35:01,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-03-15 00:35:01,035 [ scc.git] DEBUG Calling 'git remote'
2024-03-15 00:35:01,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:35:01,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-03-15 00:35:01,040 [ scc.git] DEBUG Calling 'git remote'
2024-03-15 00:35:01,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:35:01,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-03-15 00:35:01,045 [ scc.git] DEBUG Calling 'git remote'
2024-03-15 00:35:01,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-03-15 00:35:01,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-03-15 00:35:01,051 [ scc.git] DEBUG Calling 'git remote'
2024-03-15 00:35:01,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open
h.request(req.get_method(), req.selector, req.data, headers,
File "/usr/lib64/python3.9/http/client.py", line 1285, in request
self._send_request(method, url, body, headers, encode_chunked)
File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request
self.endheaders(body, encode_chunked=encode_chunked)
File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders
self._send_output(message_body, encode_chunked=encode_chunked)
File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output
self.send(msg)
File "/usr/lib64/python3.9/http/client.py", line 980, in send
self.connect()
File "/usr/lib64/python3.9/http/client.py", line 1447, in connect
super().connect()
File "/usr/lib64/python3.9/http/client.py", line 946, in connect
self.sock = self._create_connection(
File "/usr/lib64/python3.9/socket.py", line 823, in create_connection
for res in getaddrinfo(host, port, 0, SOCK_STREAM):
File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo
for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
socket.gaierror: [Errno -2] Name or service not known
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 517, in open
response = self._open(req, data)
File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open
result = self._call_chain(self.handle_open, protocol, protocol +
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open
return self.do_open(http.client.HTTPSConnection, req,
File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open
raise URLError(err)
urllib.error.URLError: <urlopen error [Errno -2] Name or service not known>
Downloading https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/usr/lib64/python3.9/urllib/request.py", line 1346, in do_open
h.request(req.get_method(), req.selector, req.data, headers,
File "/usr/lib64/python3.9/http/client.py", line 1285, in request
self._send_request(method, url, body, headers, encode_chunked)
File "/usr/lib64/python3.9/http/client.py", line 1331, in _send_request
self.endheaders(body, encode_chunked=encode_chunked)
File "/usr/lib64/python3.9/http/client.py", line 1280, in endheaders
self._send_output(message_body, encode_chunked=encode_chunked)
File "/usr/lib64/python3.9/http/client.py", line 1040, in _send_output
self.send(msg)
File "/usr/lib64/python3.9/http/client.py", line 980, in send
self.connect()
File "/usr/lib64/python3.9/http/client.py", line 1447, in connect
super().connect()
File "/usr/lib64/python3.9/http/client.py", line 946, in connect
self.sock = self._create_connection(
File "/usr/lib64/python3.9/socket.py", line 823, in create_connection
for res in getaddrinfo(host, port, 0, SOCK_STREAM):
File "/usr/lib64/python3.9/socket.py", line 954, in getaddrinfo
for res in _socket.getaddrinfo(host, port, family, type, proto, flags):
socket.gaierror: [Errno -2] Name or service not known
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 517, in open
response = self._open(req, data)
File "/usr/lib64/python3.9/urllib/request.py", line 534, in _open
result = self._call_chain(self.handle_open, protocol, protocol +
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 1389, in https_open
return self.do_open(http.client.HTTPSConnection, req,
File "/usr/lib64/python3.9/urllib/request.py", line 1349, in do_open
raise URLError(err)
urllib.error.URLError: <urlopen error [Errno -2] Name or service not known>
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 5863350
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 0dc60bd6
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 2078ac7
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 99aebd2a6
nothing to commit, working tree clean
HEAD detached from 2c91b66
nothing to commit, working tree clean
2024-03-15 00:35:31,242 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS