Started by upstream project "BIOFORMATS-test-repo" build number 255
originally caused by:
Started by upstream project "Trigger" build number 279
originally caused by:
Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5
[BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins4228369827841541224.sh
+ '[' gatan = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_40139_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
[echo] isSnapshot = true
init-title:
[echo] ----------=========== bio-formats-testing-framework ===========----------
init-timestamp:
init:
copy-resources:
compile:
[resolver:resolve] Resolving artifacts
compile-tests:
[resolver:resolve] Resolving artifacts
[javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
[javac] warning: [options] bootstrap class path not set in conjunction with -source 8
[javac] warning: [options] source value 8 is obsolete and will be removed in a future release
[javac] warning: [options] target value 8 is obsolete and will be removed in a future release
[javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
[javac] 4 warnings
test-automated:
[testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
[testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
[testng] File leak detector installed
[testng] 00:22:15,599 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
[testng] 00:22:15,600 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service.
[testng] 00:22:15,600 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:22:15,601 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
[testng] 00:22:15,601 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
[testng] 00:22:15,601 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
[testng] 00:22:15,602 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
[testng] 00:22:15,602 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:22:15,602 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
[testng] 00:22:15,603 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
[testng] 00:22:15,603 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
[testng] 00:22:15,603 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
[testng] 00:22:15,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
[testng] 00:22:15,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
[testng] 00:22:15,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
[testng] 00:22:15,781 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
[testng] 00:22:15,787 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
[testng] 00:22:15,787 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
[testng] 00:22:15,787 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
[testng] 00:22:15,787 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
[testng] 00:22:15,787 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration.
[testng] 00:22:15,788 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point
[testng] 00:22:15,788 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 186 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
[testng] [2024-11-14 00:22:15,797] [main] java.version = 21
[testng] 00:22:15,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
[testng] 00:22:15,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:15,839 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-14_00-22-15.log]
[testng] 00:22:15,841 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration.
[testng] [2024-11-14 00:22:15,842] [main] testng.directory = /data
[testng] [2024-11-14 00:22:15,842] [main] testng.configDirectory = /config
[testng] [2024-11-14 00:22:15,851] [main] testng.multiplier = 1.0
[testng] [2024-11-14 00:22:15,852] [main] testng.in-memory = false
[testng] [2024-11-14 00:22:15,853] [main] testng.allow-missing = false
[testng] [2024-11-14 00:22:15,853] [main] user.language = en
[testng] [2024-11-14 00:22:15,853] [main] user.country = ${user.country}
[testng] [2024-11-14 00:22:15,853] [main] Maximum heap size = 15360 MB
[testng] Scanning for files...
[testng] [2024-11-14 00:22:19,193] [main] ----------------------------------------
[testng] [2024-11-14 00:22:19,193] [main] Total files: 103
[testng] [2024-11-14 00:22:19,193] [main] Scan time: 3.34 s (32 ms/file)
[testng] [2024-11-14 00:22:19,194] [main] ----------------------------------------
[testng] Building list of tests...
[testng] Ready to test 98 files
[testng] [TestNG] Running:
[testng] Bio-Formats software test suite
[testng]
[testng] [2024-11-14 00:22:34,814] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.tif:
[testng] 00:22:34,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
[testng] 00:22:34,815 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:34,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-14_00-22-34.log]
[testng] 00:22:34,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6759a4d1 - End of configuration.
[testng] [2024-11-14 00:22:35,642] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4:
[testng] 00:22:35,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
[testng] 00:22:35,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:35,643 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-14_00-22-35.log]
[testng] 00:22:35,644 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d0405b4 - End of configuration.
[testng] [2024-11-14 00:22:35,779] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4:
[testng] 00:22:35,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
[testng] 00:22:35,780 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:35,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-14_00-22-35.log]
[testng] 00:22:35,781 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1aa481b7 - End of configuration.
[testng] [2024-11-14 00:22:35,902] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4:
[testng] 00:22:35,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
[testng] 00:22:35,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:35,903 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-14_00-22-35.log]
[testng] 00:22:35,903 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a3b4667 - End of configuration.
[testng] [2024-11-14 00:22:36,035] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4:
[testng] 00:22:36,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
[testng] 00:22:36,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:36,036 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-14_00-22-36.log]
[testng] 00:22:36,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@727a1e7a - End of configuration.
[testng] [2024-11-14 00:22:36,179] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4:
[testng] 00:22:36,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
[testng] 00:22:36,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:36,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-14_00-22-36.log]
[testng] 00:22:36,181 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6efd9437 - End of configuration.
[testng] [2024-11-14 00:22:36,311] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif:
[testng] 00:22:36,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
[testng] 00:22:36,311 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:36,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-14_00-22-36.log]
[testng] 00:22:36,312 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b2de5d9 - End of configuration.
[testng] [2024-11-14 00:22:37,201] [pool-1-thread-6] Initializing /data/jay/Carbon.34.dm3:
[testng] 00:22:37,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
[testng] 00:22:37,201 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:37,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-14_00-22-37.log]
[testng] 00:22:37,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b59108f - End of configuration.
[testng] [2024-11-14 00:22:37,386] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3:
[testng] 00:22:37,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
[testng] 00:22:37,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:37,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-14_00-22-37.log]
[testng] 00:22:37,387 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d7c1c25 - End of configuration.
[testng] [2024-11-14 00:22:37,565] [pool-1-thread-4] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4:
[testng] 00:22:37,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
[testng] 00:22:37,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:37,566 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-14_00-22-37.log]
[testng] 00:22:37,566 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28b099e6 - End of configuration.
[testng] [2024-11-14 00:22:37,749] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4:
[testng] 00:22:37,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
[testng] 00:22:37,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:37,750 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-14_00-22-37.log]
[testng] 00:22:37,751 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8cd8ced - End of configuration.
[testng] [2024-11-14 00:22:37,883] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb3-S3.dm3:
[testng] 00:22:37,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
[testng] 00:22:37,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
[testng] 00:22:37,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-14_00-22-37.log]
[testng] 00:22:37,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ef0c82a - End of configuration.
[testng] [2024-11-14 00:22:41,404] [pool-1-thread-9] Initializing /data/jay/recAmag6500dm.dm3:
[testng] [2024-11-14 00:22:41,534] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4:
[testng] [2024-11-14 00:22:42,789] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb2-S9.dm3:
[testng] [2024-11-14 00:22:42,928] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4:
[testng] [2024-11-14 00:22:43,111] [pool-1-thread-11] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif:
[testng] [2024-11-14 00:22:44,236] [pool-1-thread-10] Initializing /data/jay/DMtest.dm3:
[testng] [2024-11-14 00:22:44,893] [pool-1-thread-4] Initializing /data/jay/smallerfile.dm3:
[testng] [2024-11-14 00:22:45,415] [pool-1-thread-6] Initializing /data/jay/dnasample.tif:
[testng] [2024-11-14 00:22:46,415] [pool-1-thread-5] Initializing /data/qa-7642/8.dm4:
[testng] [2024-11-14 00:22:46,622] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4:
[testng] [2024-11-14 00:22:47,819] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4:
[testng] [2024-11-14 00:22:48,032] [pool-1-thread-9] Initializing /data/qa-21647/Sample2_L1-0002.dm4:
[testng] [2024-11-14 00:22:48,324] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3:
[testng] [2024-11-14 00:22:48,941] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-11-14 00:22:50,437] [pool-1-thread-8] Initializing /data/melissa/annotation-test.tif:
[testng] [2024-11-14 00:22:51,329] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4:
[testng] [2024-11-14 00:22:51,459] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4:
[testng] [2024-11-14 00:22:51,718] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4:
[testng] [2024-11-14 00:22:51,868] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S1.dm3:
[testng] [2024-11-14 00:22:52,550] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e3.dm3:
[testng] [2024-11-14 00:22:54,042] [pool-1-thread-11] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4:
[testng] [2024-11-14 00:22:54,187] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4:
[testng] [2024-11-14 00:22:55,229] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4:
[testng] [2024-11-14 00:22:56,015] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-11-14 00:22:57,779] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4:
[testng] [2024-11-14 00:22:58,822] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4:
[testng] [2024-11-14 00:22:58,997] [pool-1-thread-8] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif:
[testng] [2024-11-14 00:22:59,875] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4:
[testng] [2024-11-14 00:23:00,536] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.dm3:
[testng] [2024-11-14 00:23:03,293] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3:
[testng] [2024-11-14 00:23:03,430] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S8.dm3:
[testng] [2024-11-14 00:23:03,670] [pool-1-thread-1] Initializing /data/ofra/lowloss.dm3:
[testng] [2024-11-14 00:23:04,015] [pool-1-thread-6] Initializing /data/samples/test-tiles.dm3:
[testng] [2024-11-14 00:23:05,462] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4:
[testng] [2024-11-14 00:23:05,858] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif:
[testng] [2024-11-14 00:23:07,639] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e5.dm3:
[testng] [2024-11-14 00:23:08,552] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3:
[testng] [2024-11-14 00:23:08,756] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif:
[testng] [2024-11-14 00:23:09,957] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4:
[testng] [2024-11-14 00:23:10,211] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3:
[testng] [2024-11-14 00:23:10,387] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif:
[testng] [2024-11-14 00:23:11,401] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4:
[testng] [2024-11-14 00:23:11,615] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3:
[testng] [2024-11-14 00:23:11,955] [pool-1-thread-11] Initializing /data/thorsten/60kx_HAADF_03.dm3:
[testng] [2024-11-14 00:23:12,808] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4:
[testng] [2024-11-14 00:23:13,659] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4:
[testng] [2024-11-14 00:23:13,964] [pool-1-thread-5] Initializing /data/jay/biosamplefullframe.dm3:
[testng] [2024-11-14 00:23:14,442] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif:
[testng] [2024-11-14 00:23:15,533] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4:
[testng] [2024-11-14 00:23:15,837] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4:
[testng] [2024-11-14 00:23:16,218] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-11-14 00:23:16,463] [pool-1-thread-10] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4:
[testng] [2024-11-14 00:23:16,638] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4:
[testng] [2024-11-14 00:23:17,199] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3:
[testng] [2024-11-14 00:23:17,625] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4:
[testng] [2024-11-14 00:23:18,187] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-11-14 00:23:19,839] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.tif:
[testng] [2024-11-14 00:23:21,215] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4:
[testng] [2024-11-14 00:23:21,807] [pool-1-thread-6] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif:
[testng] [2024-11-14 00:23:23,073] [pool-1-thread-5] Initializing /data/jay/camtest1.dm3:
[testng] [2024-11-14 00:23:23,287] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4:
[testng] [2024-11-14 00:23:23,846] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4:
[testng] [2024-11-14 00:23:24,044] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3:
[testng] [2024-11-14 00:23:24,863] [pool-1-thread-1] Initializing /data/melissa/annotation-test.dm3:
[testng] [2024-11-14 00:23:25,211] [pool-1-thread-10] Initializing /data/jay/recAmaghi.dm3:
[testng] [2024-11-14 00:23:25,592] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif:
[testng] [2024-11-14 00:23:27,556] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4:
[testng] [2024-11-14 00:23:28,216] [pool-1-thread-3] Initializing /data/samples/mode-metadata/mode_format_test.dm3:
[testng] [2024-11-14 00:23:28,562] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif:
[testng] [2024-11-14 00:23:30,355] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4:
[testng] [2024-11-14 00:23:30,658] [pool-1-thread-1] Initializing /data/qa-11392/Example_Gatan_File.dm4:
[testng] [2024-11-14 00:23:31,068] [pool-1-thread-10] Initializing /data/jay/ViewDMtest.dm3:
[testng] [2024-11-14 00:23:31,405] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S7.dm3:
[testng] [2024-11-14 00:23:32,096] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4:
[testng] [2024-11-14 00:23:32,565] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4:
[testng] [2024-11-14 00:23:32,773] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4:
[testng] [2024-11-14 00:23:33,092] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif:
[testng] [2024-11-14 00:23:34,904] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4:
[testng] [2024-11-14 00:23:35,090] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4:
[testng] [2024-11-14 00:23:36,085] [pool-1-thread-8] Initializing /data/qa-21761/example.dm4:
[testng] [2024-11-14 00:23:36,254] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4:
[testng] [2024-11-14 00:23:36,433] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4:
[testng] [2024-11-14 00:23:37,212] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif:
[testng] [2024-11-14 00:23:38,302] [pool-1-thread-2] Initializing /data/jay/graphitedm3.dm3:
[testng] [2024-11-14 00:23:38,657] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif:
[testng] [2024-11-14 00:23:39,694] [pool-1-thread-12] Initializing /data/ofra/Co on INT 28-12-10.11.dm3:
[testng]
[testng] ===============================================
[testng] Bio-Formats software test suite
[testng] Total tests run: 5194, Failures: 0, Skips: 0
[testng] ===============================================
[testng]
BUILD SUCCESSFUL
Total time: 1 minute 38 seconds
Finished: SUCCESS