Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 6c8647e73bf88ae05d5ec656f70844a60f6b6e6c (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6c8647e73bf88ae05d5ec656f70844a60f6b6e6c # timeout=10 Commit message: "Merge pull request #434 from will-moore/figure" > git rev-list --no-walk 6c8647e73bf88ae05d5ec656f70844a60f6b6e6c # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git config --get submodule.figure.url # timeout=10 > git config -f .gitmodules --get submodule.figure.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 > git submodule update --init --recursive figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 86 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.10.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.14.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.1-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (45 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.20-py3-none-any.whl.metadata (7.2 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.10.0-py3-none-any.whl (455 kB) Using cached pyjwt-2.14.0-py3-none-any.whl (32 kB) Using cached cryptography-50.0.1-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB) Using cached idna-3.20-py3-none-any.whl (69 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.10.0 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.1 cryptography-50.0.1 future-1.0.0 idna-3.20 pycparser-3.0 pyjwt-2.14.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-09-23 10:28:59,020 [ scc.config] DEBUG Found github.token 2026-09-23 10:28:59,022 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-09-23 10:28:59,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:28:59,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:29:00,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-09-23 10:29:00,162 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 11:09 2026-09-23 10:29:00,163 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:00,173 [ scc.git] DEBUG Check current status 2026-09-23 10:29:00,173 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:00,199 [ scc.git] DEBUG 6c8647e Merge pull request #434 from will-moore/figure 2026-09-23 10:29:00,200 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:00,411 [ scc.git] DEBUG 393587512d75ac33d3e750a46847ab074bfb435f figure (heads/master) 2026-09-23 10:29:00,506 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-23 10:29:00,564 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-23 10:29:00,630 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-09-23 10:29:00,686 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-09-23 10:29:00,766 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-09-23 10:29:00,810 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-23 10:29:00,871 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-23 10:29:00,954 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-09-23 10:29:00,995 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-23 10:29:01,057 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-09-23 10:29:01,107 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-23 10:29:01,145 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-23 10:29:01,213 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-09-23 10:29:01,256 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-23 10:29:01,322 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-09-23 10:29:01,375 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-23 10:29:01,441 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-09-23 10:29:01,515 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-09-23 10:29:01,560 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-23 10:29:01,612 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-23 10:29:01,650 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-23 10:29:01,674 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-09-23 10:29:01,685 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:02,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-09-23 10:29:02,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:03,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:03,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:29:03,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:29:03,978 [ scc.git] DEBUG Resetting... 2026-09-23 10:29:03,978 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-09-23 10:29:04,312 [ scc.git] DEBUG HEAD is now at 6c8647e Merge pull request #434 from will-moore/figure 2026-09-23 10:29:04,313 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-09-23 10:29:05,582 [ scc.git] DEBUG Check current status 2026-09-23 10:29:05,582 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:05,608 [ scc.git] DEBUG 6c8647e Merge pull request #434 from will-moore/figure 2026-09-23 10:29:05,609 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:05,803 [ scc.git] DEBUG 393587512d75ac33d3e750a46847ab074bfb435f figure (heads/master) 2026-09-23 10:29:05,886 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-23 10:29:05,919 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-23 10:29:05,958 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-09-23 10:29:05,999 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-09-23 10:29:06,060 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-09-23 10:29:06,098 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-23 10:29:06,132 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-23 10:29:06,204 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-09-23 10:29:06,244 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-23 10:29:06,290 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-09-23 10:29:06,325 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-23 10:29:06,359 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-23 10:29:06,393 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-09-23 10:29:06,444 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-23 10:29:06,483 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-09-23 10:29:06,520 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-23 10:29:06,557 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-09-23 10:29:06,593 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-09-23 10:29:06,630 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-23 10:29:06,665 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-23 10:29:06,701 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-23 10:29:06,724 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-09-23 10:29:06,725 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-09-23 10:29:06,725 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-09-23 10:29:06,725 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-09-23 10:29:06,725 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-09-23 10:29:06,725 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-09-23 10:29:06,725 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:29:07,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-09-23 10:29:07,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-09-23 10:29:07,609 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:29:07,610 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-23 10:29:08,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-09-23 10:29:08,122 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:29:08,122 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-23 10:29:08,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-09-23 10:29:08,646 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:29:08,646 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-23 10:29:08,646 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:29:08,646 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:29:08,646 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:29:08,667 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:29:08,693 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:29:08,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:29:08,714 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:29:08,762 [ scc.git] DEBUG Already up to date. 2026-09-23 10:29:08,762 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-09-23 10:29:09,233 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-23 10:29:09,233 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-09-23 10:29:09,265 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-09-23 10:29:09,771 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-23 10:29:09,771 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-09-23 10:29:09,799 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-09-23 10:29:10,296 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-23 10:29:10,296 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-09-23 10:29:10,325 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:29:10,325 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:29:10,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:29:10,335 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-23 10:29:10,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:29:10,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-23 10:29:11,035 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:29:11,095 [ scc.git] DEBUG scripts | 2 +- 2026-09-23 10:29:11,095 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:29:11,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:29:11,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-23 10:29:11,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:29:11,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-23 10:29:12,157 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:29:12,236 [ scc.git] DEBUG omero-figure | 2 +- 2026-09-23 10:29:12,236 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:29:12,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:29:12,425 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-23 10:29:12,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:29:12,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-23 10:29:13,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:29:13,235 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-09-23 10:29:13,235 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:29:13,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:29:13,438 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:29:14,428 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-09-23 10:29:15,588 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-09-23 10:29:15,940 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-09-23 10:29:15,940 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:29:15,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:29:15,953 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:29:18,383 [ scc.git] DEBUG has no local changes 2026-09-23 10:29:18,383 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:29:19,945 [ scc.git] DEBUG [detached HEAD 497ba68] merge master -Dorg -Snone 2026-09-23 10:29:19,949 [ scc.merge] INFO Repository: ome/omero-plugins 2026-09-23 10:29:19,950 [ scc.merge] INFO Already up to date. 2026-09-23 10:29:19,950 [ scc.merge] INFO 2026-09-23 10:29:19,950 [ scc.merge] INFO Merged PRs: 2026-09-23 10:29:19,950 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-23 10:29:19,950 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-23 10:29:19,950 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-23 10:29:19,950 [ scc.merge] INFO 2026-09-23 10:29:19,950 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-09-23 10:29:19,950 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'figure' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out 'd5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' Submodule path 'omero-figure': checked out '3195c3df4e7bf2507d9c942d5d8c9a8566498147' Submodule path 'omero-iviewer': checked out '6c554250ea1528ff339ac06c3fe1e0621fe48576' Submodule path 'omero-metadata': checked out '6a653e49e3589ccb463166506896639f6f0a5a2b' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-09-23 10:29:42,584 [ scc.config] DEBUG Found github.token 2026-09-23 10:29:42,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-09-23 10:29:42,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:29:43,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:29:43,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-09-23 10:29:43,885 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 11:09 2026-09-23 10:29:43,885 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:43,895 [ scc.git] DEBUG Check current status 2026-09-23 10:29:43,896 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:43,916 [ scc.git] DEBUG 497ba68 merge master -Dorg -Snone 2026-09-23 10:29:43,917 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:44,097 [ scc.git] DEBUG 393587512d75ac33d3e750a46847ab074bfb435f figure (heads/master) 2026-09-23 10:29:44,170 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-23 10:29:44,212 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-23 10:29:44,256 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-09-23 10:29:44,308 [ scc.git] DEBUG +d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82 omero-cli-zarr (v0.9.0-1-gd5f88d8) 2026-09-23 10:29:44,372 [ scc.git] DEBUG +3195c3df4e7bf2507d9c942d5d8c9a8566498147 omero-figure (v8.0.1-1-g3195c3df) 2026-09-23 10:29:44,413 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-23 10:29:44,452 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-23 10:29:44,540 [ scc.git] DEBUG +6c554250ea1528ff339ac06c3fe1e0621fe48576 omero-iviewer (v0.19.0-1-g6c554250) 2026-09-23 10:29:44,576 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-23 10:29:44,620 [ scc.git] DEBUG +6a653e49e3589ccb463166506896639f6f0a5a2b omero-metadata (v0.14.0-2-g6a653e4) 2026-09-23 10:29:44,654 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-23 10:29:44,688 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-23 10:29:44,727 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-09-23 10:29:44,769 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-23 10:29:44,812 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-09-23 10:29:44,848 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-23 10:29:44,880 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-09-23 10:29:44,913 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-09-23 10:29:44,944 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-23 10:29:44,973 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-23 10:29:45,005 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-23 10:29:45,025 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-09-23 10:29:45,036 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:45,036 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-09-23 10:29:45,039 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-09-23 10:29:45,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-09-23 10:29:45,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:46,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:46,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:29:47,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:29:47,317 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:29:47,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/figure 2026-09-23 10:29:47,522 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:47,535 [ scc.git] DEBUG Check current status 2026-09-23 10:29:47,535 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:47,557 [ scc.git] DEBUG 3935875 Merge pull request #10 from Rdornier/fix-arrow-flip 2026-09-23 10:29:47,558 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:47,690 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:48,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure HTTP/1.1" 200 None 2026-09-23 10:29:48,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:48,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:49,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:29:49,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:29:49,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:29:50,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:29:50,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-09-23 10:29:50,056 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:50,069 [ scc.git] DEBUG Check current status 2026-09-23 10:29:50,070 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:50,089 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-09-23 10:29:50,090 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:50,211 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:50,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-09-23 10:29:51,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:51,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:51,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:29:52,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:29:52,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:29:52,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:29:52,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-09-23 10:29:52,531 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:52,544 [ scc.git] DEBUG Check current status 2026-09-23 10:29:52,545 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:52,565 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-09-23 10:29:52,566 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:52,688 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:53,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-09-23 10:29:53,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:54,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:54,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:29:54,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:29:54,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:29:55,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:29:55,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-09-23 10:29:55,087 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:55,101 [ scc.git] DEBUG Check current status 2026-09-23 10:29:55,101 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:55,120 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-09-23 10:29:55,121 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:55,240 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:55,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-09-23 10:29:56,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:56,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:57,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:29:57,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:29:57,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:29:57,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:29:57,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-09-23 10:29:57,603 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:29:57,619 [ scc.git] DEBUG Check current status 2026-09-23 10:29:57,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:29:57,644 [ scc.git] DEBUG d5f88d8 Bump version: 0.9.0 → 0.9.1.dev0 2026-09-23 10:29:57,645 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:29:57,775 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:29:58,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-09-23 10:29:58,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:29:59,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:29:59,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:00,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:00,258 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:00,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:00,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-09-23 10:30:00,377 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:00,392 [ scc.git] DEBUG Check current status 2026-09-23 10:30:00,392 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:00,424 [ scc.git] DEBUG 3195c3df Bump version: 8.0.1 → 8.0.2.dev0 2026-09-23 10:30:00,427 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:00,573 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:00,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-09-23 10:30:01,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:02,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:02,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:02,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:02,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:03,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:03,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-09-23 10:30:03,094 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:03,109 [ scc.git] DEBUG Check current status 2026-09-23 10:30:03,109 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:03,126 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-09-23 10:30:03,126 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:03,258 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:03,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-09-23 10:30:04,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:04,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:04,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:05,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:05,465 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:05,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:05,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-09-23 10:30:05,583 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:05,596 [ scc.git] DEBUG Check current status 2026-09-23 10:30:05,596 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:05,614 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-09-23 10:30:05,615 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:05,741 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:06,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-09-23 10:30:06,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:07,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:07,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:08,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:08,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:08,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:08,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-09-23 10:30:08,210 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:08,227 [ scc.git] DEBUG Check current status 2026-09-23 10:30:08,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:08,255 [ scc.git] DEBUG 6c554250 add dev 2026-09-23 10:30:08,257 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:08,381 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:08,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-09-23 10:30:09,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:09,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:10,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:10,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:10,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:10,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:10,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-09-23 10:30:10,795 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:10,807 [ scc.git] DEBUG Check current status 2026-09-23 10:30:10,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:10,826 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-09-23 10:30:10,827 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:10,948 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:11,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-09-23 10:30:11,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:12,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:12,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:13,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:13,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:13,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:13,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-09-23 10:30:13,303 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:13,319 [ scc.git] DEBUG Check current status 2026-09-23 10:30:13,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:13,346 [ scc.git] DEBUG 6a653e4 Fix workflow permission indentation 2026-09-23 10:30:13,347 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:13,472 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:13,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-09-23 10:30:14,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:14,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:15,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:15,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:15,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:15,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:15,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-09-23 10:30:15,889 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:15,902 [ scc.git] DEBUG Check current status 2026-09-23 10:30:15,902 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:15,921 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-09-23 10:30:15,923 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:16,053 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:16,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-09-23 10:30:17,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:17,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:18,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:18,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:18,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:18,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:18,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-09-23 10:30:18,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:18,997 [ scc.git] DEBUG Check current status 2026-09-23 10:30:18,997 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:19,015 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-09-23 10:30:19,017 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:19,183 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:19,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-09-23 10:30:20,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:20,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:20,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:21,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:21,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:21,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:21,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-09-23 10:30:21,557 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:21,572 [ scc.git] DEBUG Check current status 2026-09-23 10:30:21,572 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:21,594 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-09-23 10:30:21,595 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:21,727 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:22,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-09-23 10:30:22,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:23,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:23,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:24,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:24,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:24,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:24,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-09-23 10:30:24,346 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:24,364 [ scc.git] DEBUG Check current status 2026-09-23 10:30:24,364 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:24,387 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-09-23 10:30:24,389 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:24,540 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:24,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-09-23 10:30:25,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:25,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:26,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:26,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:26,746 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:26,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:26,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-09-23 10:30:26,871 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:26,885 [ scc.git] DEBUG Check current status 2026-09-23 10:30:26,885 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:26,907 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-09-23 10:30:26,908 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:27,048 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:27,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-09-23 10:30:27,276 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-09-23 10:30:27,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-09-23 10:30:28,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:28,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:29,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:29,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:29,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:29,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:29,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-09-23 10:30:29,625 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:29,638 [ scc.git] DEBUG Check current status 2026-09-23 10:30:29,638 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:29,657 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-09-23 10:30:29,658 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:29,812 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:30,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-09-23 10:30:30,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:31,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:31,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:32,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:32,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:32,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:32,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-09-23 10:30:32,257 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:32,275 [ scc.git] DEBUG Check current status 2026-09-23 10:30:32,275 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:32,304 [ scc.git] DEBUG 160d894 Fix display of code 2026-09-23 10:30:32,306 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:32,485 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:32,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-09-23 10:30:33,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:33,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:34,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:34,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:34,723 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:34,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:34,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-09-23 10:30:34,859 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:34,887 [ scc.git] DEBUG Check current status 2026-09-23 10:30:34,887 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:34,913 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-09-23 10:30:34,914 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:35,043 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:35,043 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-09-23 10:30:35,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-09-23 10:30:35,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:36,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:36,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:37,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:37,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:37,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:37,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-09-23 10:30:37,481 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:37,496 [ scc.git] DEBUG Check current status 2026-09-23 10:30:37,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:37,514 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-09-23 10:30:37,515 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:37,651 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:37,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-09-23 10:30:37,887 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-09-23 10:30:38,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-09-23 10:30:38,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:39,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:39,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:40,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:40,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:40,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:40,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-09-23 10:30:40,419 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:40,435 [ scc.git] DEBUG Check current status 2026-09-23 10:30:40,435 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:40,454 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-09-23 10:30:40,455 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:40,601 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:40,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-09-23 10:30:40,803 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-09-23 10:30:41,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-09-23 10:30:41,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:42,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:42,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:43,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:43,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:43,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:43,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-09-23 10:30:43,144 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:43,160 [ scc.git] DEBUG Check current status 2026-09-23 10:30:43,160 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:43,182 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-09-23 10:30:43,183 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:43,328 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:43,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-09-23 10:30:44,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:44,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:45,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:45,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:45,556 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:45,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:45,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-09-23 10:30:45,679 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-09-23 10:30:45,692 [ scc.git] DEBUG Check current status 2026-09-23 10:30:45,692 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:45,714 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-09-23 10:30:45,715 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:45,839 [ scc.config] DEBUG Found remote.origin.url 2026-09-23 10:30:45,839 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-09-23 10:30:46,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-23 10:30:46,082 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-23 10:30:46,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-09-23 10:30:46,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-09-23 10:30:47,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-09-23 10:30:47,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-09-23 10:30:48,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-09-23 10:30:48,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:30:48,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:30:48,464 [ scc.git] DEBUG Resetting... 2026-09-23 10:30:48,464 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-09-23 10:30:48,811 [ scc.git] DEBUG HEAD is now at 497ba68 merge master -Dorg -Snone 2026-09-23 10:30:48,812 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-09-23 10:30:49,290 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-09-23 10:30:49,783 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-09-23 10:30:51,121 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-09-23 10:30:52,494 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-09-23 10:30:52,928 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-09-23 10:30:53,369 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-09-23 10:30:53,735 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-09-23 10:30:54,072 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-09-23 10:30:54,335 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-09-23 10:30:54,885 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-09-23 10:30:54,911 [ scc.git] DEBUG Check current status 2026-09-23 10:30:54,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-09-23 10:30:54,935 [ scc.git] DEBUG 497ba68 merge master -Dorg -Snone 2026-09-23 10:30:54,935 [ scc.git] DEBUG Calling 'git submodule status' 2026-09-23 10:30:55,144 [ scc.git] DEBUG 393587512d75ac33d3e750a46847ab074bfb435f figure (heads/master) 2026-09-23 10:30:55,222 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-09-23 10:30:55,260 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-09-23 10:30:55,294 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-09-23 10:30:55,342 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-09-23 10:30:55,404 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-09-23 10:30:55,445 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-09-23 10:30:55,483 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-09-23 10:30:55,559 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-09-23 10:30:55,598 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-09-23 10:30:55,641 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-09-23 10:30:55,677 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-09-23 10:30:55,713 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-09-23 10:30:55,745 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-09-23 10:30:55,778 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-09-23 10:30:55,812 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-09-23 10:30:55,843 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-09-23 10:30:55,875 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-09-23 10:30:55,905 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-09-23 10:30:55,937 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-09-23 10:30:55,970 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-09-23 10:30:56,000 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-09-23 10:30:56,024 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-09-23 10:30:56,025 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-09-23 10:30:56,025 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-09-23 10:30:56,026 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-09-23 10:30:56,026 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-09-23 10:30:56,026 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-09-23 10:30:56,026 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-09-23 10:30:56,026 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:30:56,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-09-23 10:30:56,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-09-23 10:30:56,932 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:30:57,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-09-23 10:30:58,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:30:58,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-09-23 10:30:59,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:30:59,260 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-23 10:30:59,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-09-23 10:30:59,799 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:31:00,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:00,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:01,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:01,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:31:01,952 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-23 10:31:02,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-09-23 10:31:02,486 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:31:03,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:03,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:04,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:04,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:31:04,647 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-23 10:31:04,647 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:31:04,647 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:04,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:04,661 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:31:04,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:31:04,678 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:31:04,705 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:31:04,778 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:04,778 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-09-23 10:31:05,279 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-23 10:31:05,279 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-09-23 10:31:05,309 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-09-23 10:31:05,776 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-23 10:31:05,776 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-09-23 10:31:05,807 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-09-23 10:31:06,297 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-09-23 10:31:06,297 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-09-23 10:31:06,333 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:31:06,333 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:06,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:06,345 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-23 10:31:06,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:06,393 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-09-23 10:31:06,451 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:06,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:06,674 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-23 10:31:06,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:06,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-09-23 10:31:06,773 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:07,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:07,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-23 10:31:07,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:07,146 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-09-23 10:31:07,205 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:07,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:07,554 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:31:08,360 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:08,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:08,370 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:31:08,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/pulls HTTP/1.1" 200 None 2026-09-23 10:31:09,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/17 HTTP/1.1" 200 None 2026-09-23 10:31:09,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/17/comments HTTP/1.1" 200 None 2026-09-23 10:31:09,900 [ scc.repo] DEBUG # ... Include label: include 2026-09-23 10:31:10,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/745e6ba431caddf7ab82912e006c31c54f4f5f0d?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:11,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/745e6ba431caddf7ab82912e006c31c54f4f5f0d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:11,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/745e6ba431caddf7ab82912e006c31c54f4f5f0d?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:11,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/statuses/745e6ba431caddf7ab82912e006c31c54f4f5f0d?per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:12,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/745e6ba431caddf7ab82912e006c31c54f4f5f0d?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:13,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/745e6ba431caddf7ab82912e006c31c54f4f5f0d/status HTTP/1.1" 200 None 2026-09-23 10:31:13,012 [ scc.repo] DEBUG - PR 17 Rdornier 'Do not crop rotated panel at export' 2026-09-23 10:31:13,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/15 HTTP/1.1" 200 None 2026-09-23 10:31:14,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/15/comments HTTP/1.1" 200 None 2026-09-23 10:31:14,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/e160d9e4a6c4922e25114ff646186a0bd7355f8f?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:15,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/e160d9e4a6c4922e25114ff646186a0bd7355f8f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:15,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/e160d9e4a6c4922e25114ff646186a0bd7355f8f?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:16,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/statuses/e160d9e4a6c4922e25114ff646186a0bd7355f8f?per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:16,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/e160d9e4a6c4922e25114ff646186a0bd7355f8f?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:17,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/e160d9e4a6c4922e25114ff646186a0bd7355f8f/status HTTP/1.1" 200 None 2026-09-23 10:31:17,083 [ scc.repo] DEBUG - PR 15 will-moore 'Replace navbar 'OMERO' with 'figure' and OME logo' 2026-09-23 10:31:17,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/14 HTTP/1.1" 200 None 2026-09-23 10:31:18,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/14/comments HTTP/1.1" 200 None 2026-09-23 10:31:18,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/839b88178da14755c16e5d5c098205e68f26ec55?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:19,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/839b88178da14755c16e5d5c098205e68f26ec55/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:19,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/839b88178da14755c16e5d5c098205e68f26ec55?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:20,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/statuses/839b88178da14755c16e5d5c098205e68f26ec55?per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:20,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/839b88178da14755c16e5d5c098205e68f26ec55?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:21,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/839b88178da14755c16e5d5c098205e68f26ec55/status HTTP/1.1" 200 None 2026-09-23 10:31:21,180 [ scc.repo] DEBUG - PR 14 will-moore 'App served by omero env' 2026-09-23 10:31:21,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/12 HTTP/1.1" 200 None 2026-09-23 10:31:22,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/12/comments HTTP/1.1" 200 None 2026-09-23 10:31:22,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/9 HTTP/1.1" 200 None 2026-09-23 10:31:23,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/9/comments HTTP/1.1" 200 None 2026-09-23 10:31:23,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/5 HTTP/1.1" 200 None 2026-09-23 10:31:24,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/issues/5/comments HTTP/1.1" 200 None 2026-09-23 10:31:24,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/ee5c65c3a69567451a595dea213b01b0e2e9b6ce?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:25,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/ee5c65c3a69567451a595dea213b01b0e2e9b6ce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:25,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/ee5c65c3a69567451a595dea213b01b0e2e9b6ce?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:26,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/statuses/ee5c65c3a69567451a595dea213b01b0e2e9b6ce?per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:26,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/ee5c65c3a69567451a595dea213b01b0e2e9b6ce?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:27,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/figure/commits/ee5c65c3a69567451a595dea213b01b0e2e9b6ce/status HTTP/1.1" 200 None 2026-09-23 10:31:27,339 [ scc.repo] DEBUG - PR 5 will-moore 'Add sample_figures/ngff_images_figure.json' 2026-09-23 10:31:27,339 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:31:27,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/figure 2026-09-23 10:31:27,339 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:27,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:27,355 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:31:27,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:31:27,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:31:27,401 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:31:27,475 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:27,475 [ scc.git] DEBUG Calling 'git fetch origin pull/5/head' 2026-09-23 10:31:28,188 [ scc.git] DEBUG From https://github.com/ome/figure 2026-09-23 10:31:28,188 [ scc.git] DEBUG * branch refs/pull/5/head -> FETCH_HEAD 2026-09-23 10:31:28,214 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-09-23 10:31:29,492 [ scc.git] DEBUG From https://github.com/ome/figure 2026-09-23 10:31:29,492 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-09-23 10:31:29,513 [ scc.git] DEBUG Calling 'git fetch origin pull/15/head' 2026-09-23 10:31:30,474 [ scc.git] DEBUG From https://github.com/ome/figure 2026-09-23 10:31:30,474 [ scc.git] DEBUG * branch refs/pull/15/head -> FETCH_HEAD 2026-09-23 10:31:30,497 [ scc.git] DEBUG Calling 'git fetch origin pull/17/head' 2026-09-23 10:31:31,243 [ scc.git] DEBUG From https://github.com/ome/figure 2026-09-23 10:31:31,244 [ scc.git] DEBUG * branch refs/pull/17/head -> FETCH_HEAD 2026-09-23 10:31:31,268 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:31:31,268 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:31,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:31,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ee5c65c3a69567451a595dea213b01b0e2e9b6ce' 2026-09-23 10:31:31,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:31,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 5 (Add sample_figures/ngff_images_figure.json) ee5c65c3a69567451a595dea213b01b0e2e9b6ce' 2026-09-23 10:31:31,717 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:31:31,828 [ scc.git] DEBUG sample_figures/ngff_images_figure.json | 3243 ++++++++++++++++++++++++++++++++ 2026-09-23 10:31:31,828 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 4 +- 2026-09-23 10:31:31,828 [ scc.git] DEBUG 2 files changed, 3245 insertions(+), 2 deletions(-) 2026-09-23 10:31:31,828 [ scc.git] DEBUG create mode 100644 sample_figures/ngff_images_figure.json 2026-09-23 10:31:32,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:32,029 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...839b88178da14755c16e5d5c098205e68f26ec55' 2026-09-23 10:31:32,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:32,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (App served by omero env) 839b88178da14755c16e5d5c098205e68f26ec55' 2026-09-23 10:31:32,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:31:32,696 [ scc.git] DEBUG .gitignore | 5 +++++ 2026-09-23 10:31:32,696 [ scc.git] DEBUG README.md | 9 +++++++++ 2026-09-23 10:31:32,696 [ scc.git] DEBUG src/index.html | 4 ++-- 2026-09-23 10:31:32,696 [ scc.git] DEBUG src/js/main.js | 7 ++++++- 2026-09-23 10:31:32,696 [ scc.git] DEBUG src/js/views/figure_view.js | 11 +++++------ 2026-09-23 10:31:32,696 [ scc.git] DEBUG src/js/views/lutpicker.js | 4 ++-- 2026-09-23 10:31:32,696 [ scc.git] DEBUG vite.config.js | 1 + 2026-09-23 10:31:32,696 [ scc.git] DEBUG 7 files changed, 30 insertions(+), 11 deletions(-) 2026-09-23 10:31:32,696 [ scc.git] DEBUG create mode 100644 .gitignore 2026-09-23 10:31:32,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:32,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e160d9e4a6c4922e25114ff646186a0bd7355f8f' 2026-09-23 10:31:32,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:32,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 15 (Replace navbar 'OMERO' with 'figure' and OME logo) e160d9e4a6c4922e25114ff646186a0bd7355f8f' 2026-09-23 10:31:33,325 [ scc.git] DEBUG Auto-merging src/index.html 2026-09-23 10:31:33,407 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:31:33,502 [ scc.git] DEBUG src/css/figure.css | 5 +++++ 2026-09-23 10:31:33,503 [ scc.git] DEBUG src/images/ome-logomark.svg | 21 +++++++++++++++++++++ 2026-09-23 10:31:33,503 [ scc.git] DEBUG src/index.html | 9 ++++++--- 2026-09-23 10:31:33,503 [ scc.git] DEBUG src/js/models/figure_model.js | 3 +++ 2026-09-23 10:31:33,503 [ scc.git] DEBUG 4 files changed, 35 insertions(+), 3 deletions(-) 2026-09-23 10:31:33,503 [ scc.git] DEBUG create mode 100644 src/images/ome-logomark.svg 2026-09-23 10:31:33,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:33,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...745e6ba431caddf7ab82912e006c31c54f4f5f0d' 2026-09-23 10:31:33,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:33,762 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 17 (Do not crop rotated panel at export) 745e6ba431caddf7ab82912e006c31c54f4f5f0d' 2026-09-23 10:31:34,055 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:31:34,134 [ scc.git] DEBUG ome_figure/Figure_To_Pdf.py | 2 +- 2026-09-23 10:31:34,134 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:31:34,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:34,552 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:31:34,687 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:34,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:34,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:31:34,825 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:31:34,916 [ scc.git] DEBUG has no local changes 2026-09-23 10:31:34,917 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/figure Excluded PRs: - PR 12 will-moore 'Browser based export' (stage: draft) - PR 9 will-moore 'Save omezarr collection' (stage: draft) Already up to date. Merged PRs: - PR 5 will-moore 'Add sample_figures/ngff_images_figure.json' - PR 14 will-moore 'App served by omero env' - PR 15 will-moore 'Replace navbar 'OMERO' with 'figure' and OME logo' - PR 17 Rdornier 'Do not crop rotated panel at export' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:31:35,116 [ scc.git] DEBUG [detached HEAD 00f3c20] merge master -Dorg -Ssuccess-only 2026-09-23 10:31:35,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:31:35,119 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:31:35,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-09-23 10:31:35,337 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:31:35,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-09-23 10:31:35,337 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:35,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:35,357 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:31:35,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:31:35,377 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:31:35,401 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:31:35,472 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:35,472 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:31:35,472 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:35,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:35,491 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:31:35,621 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:35,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:35,638 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:31:35,765 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:31:35,828 [ scc.git] DEBUG has no local changes 2026-09-23 10:31:35,828 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:31:36,045 [ scc.git] DEBUG [detached HEAD 72da33c] merge master -Dorg -Ssuccess-only 2026-09-23 10:31:36,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:31:36,047 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:31:36,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-09-23 10:31:37,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-09-23 10:31:37,026 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:31:37,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:38,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:38,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:31:39,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:39,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:31:39,864 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:31:40,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-09-23 10:31:40,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-09-23 10:31:40,894 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:31:40,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-09-23 10:31:40,894 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:40,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:40,913 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:31:40,934 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:31:40,934 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:31:40,958 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:31:41,018 [ scc.git] DEBUG Already up to date. 2026-09-23 10:31:41,018 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-09-23 10:31:41,514 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-09-23 10:31:41,514 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-09-23 10:31:41,544 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:31:41,544 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:41,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:41,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-09-23 10:31:41,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:41,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-09-23 10:31:41,797 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:31:41,877 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:31:41,877 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:31:42,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:42,228 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:31:42,372 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:42,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:42,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:31:42,528 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:31:42,601 [ scc.git] DEBUG has no local changes 2026-09-23 10:31:42,601 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:31:42,763 [ scc.git] DEBUG [detached HEAD 6705a47] merge master -Dorg -Ssuccess-only 2026-09-23 10:31:42,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:31:42,765 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:31:43,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-09-23 10:31:43,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-09-23 10:31:44,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-09-23 10:31:44,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:45,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:45,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:31:46,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:46,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:31:46,991 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-09-23 10:31:47,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-09-23 10:31:48,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-09-23 10:31:48,224 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:31:48,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-09-23 10:31:48,225 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:48,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:48,245 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:31:48,267 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:31:48,267 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:31:48,293 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:31:48,464 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-09-23 10:31:49,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-09-23 10:31:49,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-09-23 10:31:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-09-23 10:31:51,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-09-23 10:31:51,724 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-09-23 10:31:52,589 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-09-23 10:31:52,589 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-09-23 10:31:52,614 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:31:52,615 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:52,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:52,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-09-23 10:31:52,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:52,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-09-23 10:31:52,871 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-09-23 10:31:52,947 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:31:53,021 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-09-23 10:31:53,021 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-09-23 10:31:53,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:31:53,249 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:31:53,383 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:31:53,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:31:53,397 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:31:53,516 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:31:53,583 [ scc.git] DEBUG has no local changes 2026-09-23 10:31:53,583 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:31:53,727 [ scc.git] DEBUG [detached HEAD 6bcb70c] merge master -Dorg -Ssuccess-only 2026-09-23 10:31:53,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:31:53,729 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:31:54,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-09-23 10:31:54,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-09-23 10:31:55,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-09-23 10:31:55,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:56,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:56,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:31:57,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:57,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-09-23 10:31:58,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-09-23 10:31:58,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-09-23 10:31:58,880 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-09-23 10:31:59,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-09-23 10:31:59,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-09-23 10:32:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-09-23 10:32:01,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:32:01,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:32:02,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-09-23 10:32:02,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-09-23 10:32:03,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-09-23 10:32:03,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-09-23 10:32:03,853 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-09-23 10:32:04,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-09-23 10:32:04,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-09-23 10:32:05,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-09-23 10:32:05,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-09-23 10:32:06,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-09-23 10:32:06,466 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:32:06,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-09-23 10:32:06,467 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:32:06,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:32:06,486 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:32:06,505 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:32:06,505 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:32:06,566 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:32:07,074 [ scc.git] DEBUG Updating 11d3587..d5f88d8 2026-09-23 10:32:07,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/193 HTTP/1.1" 200 None 2026-09-23 10:32:08,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/182 HTTP/1.1" 200 None 2026-09-23 10:32:09,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/194 HTTP/1.1" 200 None 2026-09-23 10:32:10,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/197 HTTP/1.1" 200 None 2026-09-23 10:32:11,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/196 HTTP/1.1" 200 None 2026-09-23 10:32:12,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-09-23 10:32:13,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-09-23 10:32:14,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-09-23 10:32:14,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-09-23 10:32:16,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-09-23 10:32:17,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-09-23 10:32:18,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-09-23 10:32:19,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-09-23 10:32:19,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-09-23 10:32:20,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-09-23 10:32:21,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-09-23 10:32:22,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-09-23 10:32:22,618 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-09-23 10:32:23,612 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-09-23 10:32:23,612 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-09-23 10:32:23,639 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-09-23 10:32:24,355 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-09-23 10:32:24,355 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-09-23 10:32:24,386 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:32:24,386 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:32:24,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:32:24,401 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-09-23 10:32:24,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:32:24,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-09-23 10:32:25,094 [ scc.git] DEBUG Auto-merging README.rst 2026-09-23 10:32:25,094 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-09-23 10:32:25,094 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-09-23 10:32:25,136 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:32:25,137 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:32:25,218 [ scc.git] DEBUG Calling 'git reset --hard d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-23 10:32:25,483 [ scc.git] DEBUG HEAD is now at d5f88d8 Bump version: 0.9.0 → 0.9.1.dev0 2026-09-23 10:32:25,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:32:25,690 [ scc.git] DEBUG Calling 'git merge-base d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82 e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-09-23 10:32:25,774 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-23 10:32:25,810 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py --conflicts 2026-09-23 10:32:25,826 [ scc.config] DEBUG Found github.token 2026-09-23 10:32:25,826 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-09-23 10:32:25,826 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-09-23 10:32:25,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:32:25,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-09-23 10:32:26,213 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-09-23 10:32:26,213 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-09-23 10:32:26,213 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-09-23 10:32:26,213 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-09-23 10:32:26,240 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:32:26,242 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:32:26,277 [ scc.git] DEBUG Calling 'git reset --hard d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-23 10:32:26,456 [ scc.git] DEBUG HEAD is now at d5f88d8 Bump version: 0.9.0 → 0.9.1.dev0 2026-09-23 10:32:26,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:32:26,646 [ scc.git] DEBUG Calling 'git merge-base d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82 f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-09-23 10:32:26,714 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..d5f88d80a2b1a3eacda64b591e1cfe6df4f51a82' 2026-09-23 10:32:26,745 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-09-23 10:32:26,759 [ scc.config] DEBUG Found github.token 2026-09-23 10:32:26,759 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-09-23 10:32:26,759 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:32:26,875 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:32:26,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:32:26,889 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:32:26,998 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:32:27,073 [ scc.git] DEBUG has no local changes 2026-09-23 10:32:27,073 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..d5f88d8 Previously merged: - PR 193 dominikl 'Only parse import uris if stated' - PR 182 will-moore 'Revert "Remove support for Plate import"' - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' - PR 197 pwalczysko 'Fix pragma' - PR 196 will-moore 'Storage options only if needed' - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:32:27,211 [ scc.git] DEBUG [detached HEAD 583fc60] merge master -Dorg -Ssuccess-only 2026-09-23 10:32:27,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:32:27,213 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:32:27,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-09-23 10:32:28,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/706 HTTP/1.1" 200 None 2026-09-23 10:32:28,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/706/comments HTTP/1.1" 200 None 2026-09-23 10:32:29,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5fb705652bca5db75b24fb3e9421f3be09e9fa3?page=1 HTTP/1.1" 200 None 2026-09-23 10:32:29,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5fb705652bca5db75b24fb3e9421f3be09e9fa3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:32:30,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5fb705652bca5db75b24fb3e9421f3be09e9fa3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:32:30,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5fb705652bca5db75b24fb3e9421f3be09e9fa3?page=1 HTTP/1.1" 200 None 2026-09-23 10:32:31,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d5fb705652bca5db75b24fb3e9421f3be09e9fa3?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:32:31,175 [ scc.repo] DEBUG - PR 706 will-moore 'Figure repo migration' 2026-09-23 10:32:31,175 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:32:31,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-09-23 10:32:31,176 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:32:31,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:32:31,196 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:32:31,225 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:32:31,226 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:32:31,359 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:32:33,016 [ scc.git] ERROR stderr (git merge --ff-only origin/master): Updating files: 85% (70/82) Updating files: 86% (71/82) Updating files: 87% (72/82) Updating files: 89% (73/82) Updating files: 90% (74/82) Updating files: 91% (75/82) Updating files: 92% (76/82) Updating files: 93% (77/82) Updating files: 95% (78/82) Updating files: 96% (79/82) Updating files: 97% (80/82) Updating files: 98% (81/82) Updating files: 100% (82/82) Updating files: 100% (82/82), done. 2026-09-23 10:32:33,016 [ scc.git] DEBUG Updating 9cc36cde..3195c3df 2026-09-23 10:32:33,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/704 HTTP/1.1" 200 None 2026-09-23 10:32:34,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/703 HTTP/1.1" 200 None 2026-09-23 10:32:35,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/700 HTTP/1.1" 200 None 2026-09-23 10:32:35,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/692 HTTP/1.1" 200 None 2026-09-23 10:32:36,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/701 HTTP/1.1" 200 None 2026-09-23 10:32:37,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/698 HTTP/1.1" 200 None 2026-09-23 10:32:38,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/697 HTTP/1.1" 200 None 2026-09-23 10:32:39,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/695 HTTP/1.1" 200 None 2026-09-23 10:32:40,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-09-23 10:32:40,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-09-23 10:32:41,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-09-23 10:32:42,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-09-23 10:32:43,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-09-23 10:32:44,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-09-23 10:32:45,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-09-23 10:32:46,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-09-23 10:32:47,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-09-23 10:32:47,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-09-23 10:32:48,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-09-23 10:32:49,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-09-23 10:32:50,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-09-23 10:32:51,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-09-23 10:32:51,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-09-23 10:32:52,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-09-23 10:32:53,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-09-23 10:32:54,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-09-23 10:32:55,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-09-23 10:32:56,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-09-23 10:32:57,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-09-23 10:32:58,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-09-23 10:32:59,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-09-23 10:33:00,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-09-23 10:33:01,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-09-23 10:33:02,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-09-23 10:33:03,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-09-23 10:33:03,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-09-23 10:33:04,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-09-23 10:33:05,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-09-23 10:33:06,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-09-23 10:33:07,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-09-23 10:33:08,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-09-23 10:33:09,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-09-23 10:33:10,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-09-23 10:33:11,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-09-23 10:33:12,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-09-23 10:33:13,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-09-23 10:33:14,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-09-23 10:33:15,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-09-23 10:33:16,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-09-23 10:33:17,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-09-23 10:33:17,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-09-23 10:33:19,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-09-23 10:33:20,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-09-23 10:33:21,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-09-23 10:33:21,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-09-23 10:33:22,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-09-23 10:33:23,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-09-23 10:33:24,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-09-23 10:33:24,491 [ scc.git] DEBUG Calling 'git fetch origin pull/706/head' 2026-09-23 10:33:25,168 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-09-23 10:33:25,168 [ scc.git] DEBUG * branch refs/pull/706/head -> FETCH_HEAD 2026-09-23 10:33:25,216 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:33:25,217 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:33:25,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:25,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d5fb705652bca5db75b24fb3e9421f3be09e9fa3' 2026-09-23 10:33:25,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:25,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 706 (Figure repo migration) d5fb705652bca5db75b24fb3e9421f3be09e9fa3' 2026-09-23 10:33:26,237 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:33:26,353 [ scc.git] DEBUG .bumpversion.cfg | 4 +- 2026-09-23 10:33:26,353 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 + 2026-09-23 10:33:26,353 [ scc.git] DEBUG .github/workflows/pages.yml | 28 - 2026-09-23 10:33:26,353 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 + 2026-09-23 10:33:26,353 [ scc.git] DEBUG .gitignore | 7 +- 2026-09-23 10:33:26,353 [ scc.git] DEBUG .gitmodules | 3 + 2026-09-23 10:33:26,353 [ scc.git] DEBUG .omeroci/app-srv | 4 +- 2026-09-23 10:33:26,353 [ scc.git] DEBUG README.rst | 76 +- 2026-09-23 10:33:26,353 [ scc.git] DEBUG deploy_build.sh | 21 +- 2026-09-23 10:33:26,353 [ scc.git] DEBUG deploy_ghpages.sh | 1 + 2026-09-23 10:33:26,353 [ scc.git] DEBUG figure | 1 + 2026-09-23 10:33:26,354 [ scc.git] DEBUG omero_figure/scripts/__init__.py | 0 2026-09-23 10:33:26,354 [ scc.git] DEBUG omero_figure/scripts/omero/__init__.py | 0 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 3562 -------------------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/__init__.py | 0 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 8441 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 5143 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 568896 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 359272 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 301188 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 441432 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG omero_figure/views.py | 52 +- 2026-09-23 10:33:26,354 [ scc.git] DEBUG package-lock.json | 1499 -------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG package.json | 51 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG setup.py | 8 + 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/css/figure.css | 1551 --------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/html/dialogs/scriptManagerDialog.html | 86 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/arrow-icon-16.png | Bin 2878 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/button-down-grey.png | Bin 3274 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/button-down.png | Bin 1879 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/button-flat.png | Bin 2827 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/button-up.png | Bin 2111 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/crop20.png | Bin 3022 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/cursor-icon-16.png | Bin 245 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/ellipse-icon-16.png | Bin 3020 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/gradient.png | Bin 3405 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/hue.png | Bin 2837 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/line-icon-16.png | Bin 2865 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/luts_10.png | Bin 18556 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/markdown_dark32x20.png | Bin 3116 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/markdown_light32x20.png | Bin 3089 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 2477 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/polygon-icon-16.png | Bin 2880 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/polyline-icon-16.png | Bin 2874 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/projection20.png | Bin 3585 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/square-outline-icon-16.png | Bin 96 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/images/text-icon-24.png | Bin 2477 -> 0 bytes 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/index.html | 1986 ----------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/main.js | 189 -- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/models/figure_model.js | 1398 -------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/models/panel_model.js | 1577 --------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/models/roi_model.js | 149 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/models/undo.js | 282 -- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/models/zarr_utils.js | 483 --- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shapeEditorTest.js | 454 --- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 604 ---- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/line.js | 612 ---- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/point.js | 527 --- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 462 --- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/rect.js | 618 ---- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 992 ------ 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/shape_editor/text.js | 564 ---- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/backbone.mousetrap.js | 69 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 450 --- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 143 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/colorbar_form_view.js | 124 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/colorpicker.js | 143 - 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 660 ---- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/figure_view.js | 1125 ------- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/files.js | 374 -- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/info_panel_view.js | 293 -- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/label_suggestions.js | 753 ----- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 197 -- 2026-09-23 10:33:26,354 [ scc.git] DEBUG src/js/views/legend_view.js | 174 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/lutpicker.js | 181 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/modal_views.js | 536 --- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 77 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/panel_view.js | 501 --- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/raphael-rect.js | 291 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/right_panel_view.js | 1572 --------- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 250 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 645 ---- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 230 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/svg_model_view.js | 441 --- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/util.csrf.js | 83 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/util.js | 397 --- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/js/views/zt_sliders_view.js | 332 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/scss/styles.scss | 2 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/shapeEditorTest.html | 198 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/channel_slider.template.html | 90 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/colorbar.template.html | 42 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/colorbar_form.template.html | 137 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/figure_panel.template.html | 6 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/files/figure_file_item.template.html | 32 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/image_display_options.template.html | 34 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/info_panel.template.html | 54 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/labels/label.template.html | 8 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../labels/label_right_vertical.template.html | 8 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/labels/label_table.template.html | 11 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/labels/label_vertical.template.html | 8 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/labels_form.template.html | 13 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 128 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/lut_picker.template.html | 21 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 30 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../modal_dialogs/paper_setup_modal.template.html | 108 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../modal_dialogs/preview_id_change.template.html | 65 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../modal_dialogs/roi_modal_roi.template.html | 56 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../modal_dialogs/roi_modal_shape.template.html | 42 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG .../modal_dialogs/roi_zt_buttons.template.html | 9 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/rois_form.template.html | 246 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 154 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/scalebar_panel.template.html | 10 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/shapes/shape_item_template.html | 12 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 56 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 226 -- 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/viewport.template.html | 5 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 12 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/xywh_panel.template.html | 60 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/templates/zoom_crop.template.html | 28 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG src/test.html | 25 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG vite.config.js | 32 - 2026-09-23 10:33:26,355 [ scc.git] DEBUG 122 files changed, 115 insertions(+), 29753 deletions(-) 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 .github/workflows/pages.yml 2026-09-23 10:33:26,355 [ scc.git] DEBUG create mode 100644 .gitmodules 2026-09-23 10:33:26,355 [ scc.git] DEBUG create mode 160000 figure 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/__init__.py 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/omero/__init__.py 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/omero/figure_scripts/__init__.py 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 package-lock.json 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 package.json 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 src/css/figure.css 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 src/html/dialogs/scriptManagerDialog.html 2026-09-23 10:33:26,355 [ scc.git] DEBUG delete mode 100644 src/images/arrow-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/button-down-grey.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/button-down.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/button-flat.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/button-up.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/crop20.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/cursor-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/ellipse-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/gradient.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/hue.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/line-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/luts_10.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/markdown_dark32x20.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/markdown_light32x20.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/point-icon-24.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/polygon-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/polyline-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/projection20.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/square-outline-icon-16.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/images/text-icon-24.png 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/index.html 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/main.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/models/figure_model.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/models/panel_model.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/models/roi_model.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/models/undo.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/models/zarr_utils.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shapeEditorTest.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/ellipse.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/line.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/point.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/polygon.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/rect.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/shape_manager.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/shape_editor/text.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/backbone.mousetrap.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/channel_slider_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/chgrp_modal_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/colorbar_form_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/colorpicker.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/crop_modal_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/figure_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/files.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/info_panel_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/label_suggestions.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/labels_from_maps_modal.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/legend_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/lutpicker.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/modal_views.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/open_local_file_modal.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/panel_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/raphael-rect.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/right_panel_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/roi_loader_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/roi_modal_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/scalebar_form_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/svg_model_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/util.csrf.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/util.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/js/views/zt_sliders_view.js 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/scss/styles.scss 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/shapeEditorTest.html 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider.template.html 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/templates/checkbox_template.html 2026-09-23 10:33:26,356 [ scc.git] DEBUG delete mode 100644 src/templates/colorbar.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/colorbar_form.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/figure_panel.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/files/figure_file_item.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/image_display_options.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/info_panel.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/labels/label.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/labels/label_right_vertical.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/labels/label_table.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/labels/label_vertical.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/lut_picker.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/modal_dialogs/crop_modal_roi.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/modal_dialogs/paper_setup_modal.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/modal_dialogs/preview_id_change.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/modal_dialogs/roi_modal_roi.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/modal_dialogs/roi_modal_shape.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/modal_dialogs/roi_zt_buttons.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_panel.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/shapes/shape_item_template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/shapes/shape_sidebar.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/shapes/shape_toolbar.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/viewport.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_inner.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/xywh_panel.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/templates/zoom_crop.template.html 2026-09-23 10:33:26,399 [ scc.git] DEBUG delete mode 100644 src/test.html 2026-09-23 10:33:26,400 [ scc.git] DEBUG delete mode 100755 vite.config.js 2026-09-23 10:33:26,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:33:26,588 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:33:26,713 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:33:26,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:26,729 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:33:26,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:33:26,944 [ scc.git] DEBUG has no local changes 2026-09-23 10:33:26,945 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..3195c3df Previously merged: - PR 704 jburel 'Revert commit 49ae9c9' - PR 703 will-moore 'Readme remove rc' - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' - PR 692 will-moore 'colorbar lut background fix' - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 706 will-moore 'Figure repo migration' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:33:27,139 [ scc.git] DEBUG [detached HEAD d088414b] merge master -Dorg -Ssuccess-only 2026-09-23 10:33:27,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:33:27,144 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:33:27,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-09-23 10:33:28,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-09-23 10:33:28,011 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:28,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:29,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:30,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:33:30,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:31,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:31,419 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:33:31,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-09-23 10:33:32,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-09-23 10:33:32,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:33,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:34,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:34,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:34,462 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-09-23 10:33:34,462 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:33:34,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-09-23 10:33:34,463 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:33:34,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:34,482 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:33:34,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:33:34,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:33:34,521 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:33:34,585 [ scc.git] DEBUG Already up to date. 2026-09-23 10:33:34,585 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-09-23 10:33:35,193 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-09-23 10:33:35,193 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-09-23 10:33:35,222 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-09-23 10:33:35,693 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-09-23 10:33:35,693 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-09-23 10:33:35,718 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:33:35,718 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:33:35,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:35,733 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-09-23 10:33:35,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:35,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-09-23 10:33:35,954 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-09-23 10:33:36,021 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:33:36,088 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-09-23 10:33:36,088 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-09-23 10:33:36,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:33:36,284 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-09-23 10:33:36,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:36,331 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-09-23 10:33:36,556 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:33:36,632 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:33:36,632 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:33:36,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:33:36,841 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:33:36,964 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:33:36,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:33:36,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:33:37,102 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:33:37,167 [ scc.git] DEBUG has no local changes 2026-09-23 10:33:37,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:33:37,370 [ scc.git] DEBUG [detached HEAD fc1482c] merge master -Dorg -Ssuccess-only 2026-09-23 10:33:37,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:33:37,373 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:33:37,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-09-23 10:33:38,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-09-23 10:33:38,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-09-23 10:33:39,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-09-23 10:33:39,415 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:40,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:40,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:41,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:41,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:41,600 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-09-23 10:33:42,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-09-23 10:33:42,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-09-23 10:33:43,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-09-23 10:33:43,165 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:43,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:44,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:45,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:45,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:45,768 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-09-23 10:33:46,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-09-23 10:33:46,325 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:46,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:47,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:48,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:48,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:48,500 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-09-23 10:33:49,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-09-23 10:33:49,026 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:49,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:50,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:50,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:51,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:51,395 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-09-23 10:33:51,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-09-23 10:33:52,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-09-23 10:33:52,387 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:53,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:53,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:54,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:54,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:54,792 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-09-23 10:33:55,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-09-23 10:33:55,335 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:55,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:56,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:57,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:57,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:33:57,541 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-09-23 10:33:58,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-09-23 10:33:58,049 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:33:58,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-09-23 10:33:59,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:33:59,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:00,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:00,279 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-09-23 10:34:00,279 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:34:00,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-09-23 10:34:00,281 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:34:00,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:00,300 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:34:00,318 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:34:00,319 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:34:00,344 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:34:00,411 [ scc.git] DEBUG Already up to date. 2026-09-23 10:34:00,411 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-09-23 10:34:00,953 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:00,953 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-09-23 10:34:00,982 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-09-23 10:34:01,442 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:01,442 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-09-23 10:34:01,467 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-09-23 10:34:01,979 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:01,979 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-09-23 10:34:02,004 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-09-23 10:34:02,491 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:02,491 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-09-23 10:34:02,514 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-09-23 10:34:02,995 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:02,995 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-09-23 10:34:03,019 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-09-23 10:34:03,466 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:03,466 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-09-23 10:34:03,490 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-09-23 10:34:03,948 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-09-23 10:34:03,948 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-09-23 10:34:03,973 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:34:03,973 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:34:03,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:03,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-09-23 10:34:04,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:04,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-09-23 10:34:04,276 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:34:04,366 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-09-23 10:34:04,366 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-09-23 10:34:04,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:04,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-09-23 10:34:04,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:04,616 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-09-23 10:34:04,837 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:34:04,981 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:34:05,068 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-09-23 10:34:05,069 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-09-23 10:34:05,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:05,277 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-09-23 10:34:05,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:05,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-09-23 10:34:05,545 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:34:05,545 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-23 10:34:05,576 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:34:05,577 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:34:05,609 [ scc.git] DEBUG Calling 'git reset --hard 1ede408f1dcefe2238839730170332d7d3cd18ef' 2026-09-23 10:34:05,770 [ scc.git] DEBUG HEAD is now at 1ede408 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-09-23 10:34:05,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:05,961 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-09-23 10:34:05,983 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-09-23 10:34:06,001 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-09-23 10:34:06,013 [ scc.config] DEBUG Found github.token 2026-09-23 10:34:06,013 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-09-23 10:34:06,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-09-23 10:34:06,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:06,048 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-09-23 10:34:06,270 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:34:06,373 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:34:06,450 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-09-23 10:34:06,450 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-09-23 10:34:06,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:06,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-09-23 10:34:06,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:06,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-09-23 10:34:06,881 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:34:07,022 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:34:07,103 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-09-23 10:34:07,103 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-09-23 10:34:07,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:07,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-09-23 10:34:07,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:07,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-09-23 10:34:07,615 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:34:07,615 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-23 10:34:07,645 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:34:07,646 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:34:07,684 [ scc.git] DEBUG Calling 'git reset --hard 7dad3c6098588ffce5a89a8dafdd9936283deb33' 2026-09-23 10:34:07,868 [ scc.git] DEBUG HEAD is now at 7dad3c6 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-09-23 10:34:08,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:08,061 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-09-23 10:34:08,089 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-09-23 10:34:08,108 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-09-23 10:34:08,121 [ scc.config] DEBUG Found github.token 2026-09-23 10:34:08,122 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-09-23 10:34:08,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-09-23 10:34:08,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:08,163 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-09-23 10:34:08,348 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:34:08,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-23 10:34:08,376 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:34:08,377 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:34:08,408 [ scc.git] DEBUG Calling 'git reset --hard 7dad3c6098588ffce5a89a8dafdd9936283deb33' 2026-09-23 10:34:08,593 [ scc.git] DEBUG HEAD is now at 7dad3c6 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-09-23 10:34:08,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:34:09,000 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-09-23 10:34:09,024 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-09-23 10:34:09,048 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-09-23 10:34:09,063 [ scc.config] DEBUG Found github.token 2026-09-23 10:34:09,063 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-09-23 10:34:09,063 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:34:09,201 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:34:09,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:09,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:34:09,363 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:34:09,441 [ scc.git] DEBUG has no local changes 2026-09-23 10:34:09,441 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:34:09,601 [ scc.git] DEBUG [detached HEAD 6f167c6] merge master -Dorg -Ssuccess-only 2026-09-23 10:34:09,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:34:09,603 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:34:10,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-09-23 10:34:10,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/567 HTTP/1.1" 200 None 2026-09-23 10:34:11,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/38a260841feb643eaf6b5a098e1b248a6f0af57a?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:11,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/38a260841feb643eaf6b5a098e1b248a6f0af57a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:34:12,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/38a260841feb643eaf6b5a098e1b248a6f0af57a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:34:13,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/38a260841feb643eaf6b5a098e1b248a6f0af57a?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:13,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/38a260841feb643eaf6b5a098e1b248a6f0af57a?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:13,563 [ scc.repo] DEBUG - PR 567 will-moore 'Basic fix of prev/next shapes when shapes sorted' 2026-09-23 10:34:14,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/566 HTTP/1.1" 200 None 2026-09-23 10:34:14,086 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:34:14,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:15,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:34:15,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:34:16,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a0f64fab8b6ff36d8cc38e97fee618e2cd043626?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:17,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a0f64fab8b6ff36d8cc38e97fee618e2cd043626?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:17,079 [ scc.repo] DEBUG - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' 2026-09-23 10:34:17,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/565 HTTP/1.1" 200 None 2026-09-23 10:34:17,634 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:34:18,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:18,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:34:19,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:34:20,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/5bf4a3df9d457e59731fdbcc113c1da254f5d4f0?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:20,510 [ scc.repo] DEBUG - PR 565 dependabot[bot] 'Bump qs and body-parser' 2026-09-23 10:34:21,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/564 HTTP/1.1" 200 None 2026-09-23 10:34:21,042 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:34:22,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:22,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:34:23,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:34:23,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/bce482eff7b13b8edfef15f2a68f00129c6a707f?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:24,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/bce482eff7b13b8edfef15f2a68f00129c6a707f?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:24,163 [ scc.repo] DEBUG - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' 2026-09-23 10:34:24,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-09-23 10:34:25,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-09-23 10:34:25,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:26,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:34:26,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:34:27,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:27,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:27,853 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-09-23 10:34:28,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-09-23 10:34:28,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-09-23 10:34:29,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:29,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:34:30,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-09-23 10:34:30,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:34:30,927 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-09-23 10:34:30,927 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:34:30,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-09-23 10:34:30,928 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:34:30,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:34:30,951 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:34:30,981 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:34:30,982 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:34:31,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:34:32,083 [ scc.git] DEBUG Updating 7a798cee..6c554250 2026-09-23 10:34:32,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/562 HTTP/1.1" 200 None 2026-09-23 10:34:33,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/563 HTTP/1.1" 200 None 2026-09-23 10:34:34,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/559 HTTP/1.1" 200 None 2026-09-23 10:34:35,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/558 HTTP/1.1" 200 None 2026-09-23 10:34:36,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/557 HTTP/1.1" 200 None 2026-09-23 10:34:36,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-09-23 10:34:37,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-09-23 10:34:38,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-09-23 10:34:39,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-09-23 10:34:40,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-09-23 10:34:41,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-09-23 10:34:42,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-09-23 10:34:43,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-09-23 10:34:43,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-09-23 10:34:44,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-09-23 10:34:45,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-09-23 10:34:46,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-09-23 10:34:47,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-09-23 10:34:47,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-09-23 10:34:49,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-09-23 10:34:50,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-09-23 10:34:51,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-09-23 10:34:52,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-09-23 10:34:53,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-09-23 10:34:54,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-09-23 10:34:55,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-09-23 10:34:56,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-09-23 10:34:57,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-09-23 10:34:58,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-09-23 10:34:59,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-09-23 10:34:59,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-09-23 10:35:00,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-09-23 10:35:01,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-09-23 10:35:02,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-09-23 10:35:03,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-09-23 10:35:04,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-09-23 10:35:05,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-09-23 10:35:06,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-09-23 10:35:07,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-09-23 10:35:07,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-09-23 10:35:08,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-09-23 10:35:09,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-09-23 10:35:09,881 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-09-23 10:35:10,651 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-23 10:35:10,652 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-09-23 10:35:10,683 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-09-23 10:35:11,324 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-23 10:35:11,324 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-09-23 10:35:11,360 [ scc.git] DEBUG Calling 'git fetch origin pull/564/head' 2026-09-23 10:35:12,006 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-23 10:35:12,006 [ scc.git] DEBUG * branch refs/pull/564/head -> FETCH_HEAD 2026-09-23 10:35:12,039 [ scc.git] DEBUG Calling 'git fetch origin pull/565/head' 2026-09-23 10:35:12,662 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-23 10:35:12,663 [ scc.git] DEBUG * branch refs/pull/565/head -> FETCH_HEAD 2026-09-23 10:35:12,697 [ scc.git] DEBUG Calling 'git fetch origin pull/566/head' 2026-09-23 10:35:13,269 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-23 10:35:13,270 [ scc.git] DEBUG * branch refs/pull/566/head -> FETCH_HEAD 2026-09-23 10:35:13,304 [ scc.git] DEBUG Calling 'git fetch origin pull/567/head' 2026-09-23 10:35:13,951 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-09-23 10:35:13,951 [ scc.git] DEBUG * branch refs/pull/567/head -> FETCH_HEAD 2026-09-23 10:35:13,982 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:35:13,983 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:13,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:14,002 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-09-23 10:35:14,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:14,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-09-23 10:35:14,389 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-09-23 10:35:14,462 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:14,543 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-09-23 10:35:14,543 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-09-23 10:35:14,543 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-09-23 10:35:14,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:14,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-09-23 10:35:14,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:14,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging css/app.css 2026-09-23 10:35:15,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:35:15,879 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging package.json 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-09-23 10:35:15,879 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-09-23 10:35:15,911 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:35:15,915 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:35:16,011 [ scc.git] DEBUG Calling 'git reset --hard 20cb711609438b21bcc49f6868190180b3b216c6' 2026-09-23 10:35:16,508 [ scc.git] DEBUG HEAD is now at 20cb7116 merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-09-23 10:35:16,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:16,711 [ scc.git] DEBUG Calling 'git merge-base 6c554250ea1528ff339ac06c3fe1e0621fe48576 fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-09-23 10:35:16,776 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..6c554250ea1528ff339ac06c3fe1e0621fe48576' 2026-09-23 10:35:16,844 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - css/app.css - package-lock.json --conflicts 2026-09-23 10:35:16,857 [ scc.config] DEBUG Found github.token 2026-09-23 10:35:16,857 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-09-23 10:35:16,857 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bce482eff7b13b8edfef15f2a68f00129c6a707f' 2026-09-23 10:35:16,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:16,961 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (Bump fast-uri from 3.1.5 to 3.1.7) bce482eff7b13b8edfef15f2a68f00129c6a707f' 2026-09-23 10:35:17,361 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:17,439 [ scc.git] DEBUG package-lock.json | 15 ++++++++------- 2026-09-23 10:35:17,439 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 7 deletions(-) 2026-09-23 10:35:17,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:17,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5bf4a3df9d457e59731fdbcc113c1da254f5d4f0' 2026-09-23 10:35:17,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:17,745 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 565 (Bump qs and body-parser) 5bf4a3df9d457e59731fdbcc113c1da254f5d4f0' 2026-09-23 10:35:18,035 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:35:18,125 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:18,212 [ scc.git] DEBUG package-lock.json | 96 +++++++++++++++++++++++++++++++++---------------------- 2026-09-23 10:35:18,212 [ scc.git] DEBUG 1 file changed, 58 insertions(+), 38 deletions(-) 2026-09-23 10:35:18,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:18,420 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a0f64fab8b6ff36d8cc38e97fee618e2cd043626' 2026-09-23 10:35:18,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:18,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 566 (Bump js-yaml from 4.1.0 to 4.3.2) a0f64fab8b6ff36d8cc38e97fee618e2cd043626' 2026-09-23 10:35:18,814 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:35:18,900 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:18,987 [ scc.git] DEBUG package-lock.json | 70 ++++++++++++++++++++++++++++++++----------------------- 2026-09-23 10:35:18,987 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 29 deletions(-) 2026-09-23 10:35:19,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:19,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38a260841feb643eaf6b5a098e1b248a6f0af57a' 2026-09-23 10:35:19,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:19,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 567 (Basic fix of prev/next shapes when shapes sorted) 38a260841feb643eaf6b5a098e1b248a6f0af57a' 2026-09-23 10:35:19,675 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:19,767 [ scc.git] DEBUG src/model/regions_info.js | 3 ++ 2026-09-23 10:35:19,767 [ scc.git] DEBUG src/regions/regions-edit.js | 103 +++++++++++++++++++++++++++++++++++++++++--- 2026-09-23 10:35:19,767 [ scc.git] DEBUG src/regions/regions-list.js | 2 + 2026-09-23 10:35:19,767 [ scc.git] DEBUG 3 files changed, 103 insertions(+), 5 deletions(-) 2026-09-23 10:35:20,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:20,203 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:35:20,334 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:20,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:20,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:35:20,458 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:35:20,562 [ scc.git] DEBUG has no local changes 2026-09-23 10:35:20,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..6c554250 Previously merged: - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' - PR 565 dependabot[bot] 'Bump qs and body-parser' - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' - PR 567 will-moore 'Basic fix of prev/next shapes when shapes sorted' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:35:20,747 [ scc.git] DEBUG [detached HEAD 182644dd] merge master -Dorg -Ssuccess-only 2026-09-23 10:35:20,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:35:20,750 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:35:21,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-09-23 10:35:21,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/98 HTTP/1.1" 200 None 2026-09-23 10:35:22,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/98/comments HTTP/1.1" 200 None 2026-09-23 10:35:22,220 [ scc.repo] DEBUG # ... Include label: include 2026-09-23 10:35:22,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1fa070ad0afa0f3944fa2513d38db6da1f5bc783?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:23,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1fa070ad0afa0f3944fa2513d38db6da1f5bc783/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:24,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1fa070ad0afa0f3944fa2513d38db6da1f5bc783?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:24,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1fa070ad0afa0f3944fa2513d38db6da1f5bc783?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:24,461 [ scc.repo] DEBUG - PR 98 JoshuaFortriede 'use namespace with keys' 2026-09-23 10:35:24,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/97 HTTP/1.1" 200 None 2026-09-23 10:35:25,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/97/comments HTTP/1.1" 200 None 2026-09-23 10:35:25,489 [ scc.repo] DEBUG # ... Include label: include 2026-09-23 10:35:26,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/3854f1cfa0cbe79675dad16ad34fce109524eb28?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:26,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/3854f1cfa0cbe79675dad16ad34fce109524eb28/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:27,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/3854f1cfa0cbe79675dad16ad34fce109524eb28?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:27,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/3854f1cfa0cbe79675dad16ad34fce109524eb28?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:27,850 [ scc.repo] DEBUG - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' 2026-09-23 10:35:28,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-09-23 10:35:28,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-09-23 10:35:28,870 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:35:29,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:30,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:30,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:35:31,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:31,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:31,698 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:35:32,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-09-23 10:35:32,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:33,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:33,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:34,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:34,363 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:35:34,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-09-23 10:35:35,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-09-23 10:35:35,419 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:35:35,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-09-23 10:35:35,421 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:35,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:35,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:35:35,467 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:35:35,468 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:35:35,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:35:35,556 [ scc.git] DEBUG Already up to date. 2026-09-23 10:35:35,556 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-09-23 10:35:36,093 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-23 10:35:36,094 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-09-23 10:35:36,120 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-09-23 10:35:36,590 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-23 10:35:36,590 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-09-23 10:35:36,615 [ scc.git] DEBUG Calling 'git fetch origin pull/97/head' 2026-09-23 10:35:37,237 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-23 10:35:37,237 [ scc.git] DEBUG * branch refs/pull/97/head -> FETCH_HEAD 2026-09-23 10:35:37,263 [ scc.git] DEBUG Calling 'git fetch origin pull/98/head' 2026-09-23 10:35:37,805 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-09-23 10:35:37,805 [ scc.git] DEBUG * branch refs/pull/98/head -> FETCH_HEAD 2026-09-23 10:35:37,831 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:35:37,831 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:37,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:37,849 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-09-23 10:35:37,879 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:37,892 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-09-23 10:35:38,099 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:38,161 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:35:38,161 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:35:38,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:38,361 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-09-23 10:35:38,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:38,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-09-23 10:35:38,601 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-09-23 10:35:38,601 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-09-23 10:35:38,628 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:35:38,629 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:35:38,663 [ scc.git] DEBUG Calling 'git reset --hard 897df936db7ae64ba454eb1071bda885a613e0d5' 2026-09-23 10:35:38,819 [ scc.git] DEBUG HEAD is now at 897df93 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-09-23 10:35:39,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:39,020 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-09-23 10:35:39,042 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-09-23 10:35:39,059 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-09-23 10:35:39,072 [ scc.config] DEBUG Found github.token 2026-09-23 10:35:39,072 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-09-23 10:35:39,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3854f1cfa0cbe79675dad16ad34fce109524eb28' 2026-09-23 10:35:39,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:39,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 97 (BUG Fix: use HTML value to replace HTML) 3854f1cfa0cbe79675dad16ad34fce109524eb28' 2026-09-23 10:35:39,409 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:39,484 [ scc.git] DEBUG .../templates/webclient/data/includes/right_plugin.general.js.html | 4 +++- 2026-09-23 10:35:39,484 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 1 deletion(-) 2026-09-23 10:35:39,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:39,693 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fa070ad0afa0f3944fa2513d38db6da1f5bc783' 2026-09-23 10:35:39,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:39,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 98 (use namespace with keys) 1fa070ad0afa0f3944fa2513d38db6da1f5bc783' 2026-09-23 10:35:40,056 [ scc.git] DEBUG Auto-merging omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-09-23 10:35:40,133 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:40,221 [ scc.git] DEBUG .../webclient/data/includes/right_plugin.general.js.html | 11 ++++++++--- 2026-09-23 10:35:40,221 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 3 deletions(-) 2026-09-23 10:35:40,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:40,425 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:35:40,550 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:40,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:40,565 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:35:40,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:35:40,748 [ scc.git] DEBUG has no local changes 2026-09-23 10:35:40,748 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) - PR 74 will-moore 'mapr extension of webclient' (exclude comment) Already up to date. Merged PRs: - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' - PR 98 JoshuaFortriede 'use namespace with keys' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:35:40,922 [ scc.git] DEBUG [detached HEAD 77f4bfe] merge master -Dorg -Ssuccess-only 2026-09-23 10:35:40,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:35:40,925 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:35:41,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-09-23 10:35:42,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-09-23 10:35:42,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-09-23 10:35:43,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:43,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:44,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:44,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:44,705 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-09-23 10:35:45,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-09-23 10:35:45,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-09-23 10:35:46,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:46,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:47,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:47,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:47,833 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-09-23 10:35:48,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-09-23 10:35:48,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-09-23 10:35:49,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:49,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:35:50,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-09-23 10:35:50,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:35:50,946 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-09-23 10:35:50,946 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:35:50,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-09-23 10:35:50,947 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:50,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:50,967 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:35:50,989 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:35:50,989 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:35:51,027 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:35:51,359 [ scc.git] DEBUG Updating 3cd120c..6a653e4 2026-09-23 10:35:51,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/95 HTTP/1.1" 200 None 2026-09-23 10:35:52,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/94 HTTP/1.1" 200 None 2026-09-23 10:35:53,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-09-23 10:35:53,863 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-09-23 10:35:54,666 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-09-23 10:35:54,666 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-09-23 10:35:54,693 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-09-23 10:35:55,610 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-09-23 10:35:55,610 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-09-23 10:35:55,642 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-09-23 10:35:56,146 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-09-23 10:35:56,146 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-09-23 10:35:56,173 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:35:56,173 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:56,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:56,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-09-23 10:35:56,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:56,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-09-23 10:35:56,578 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-09-23 10:35:56,578 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-09-23 10:35:56,578 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-09-23 10:35:56,578 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-09-23 10:35:56,623 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:35:56,624 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:35:56,650 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-23 10:35:56,808 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-09-23 10:35:57,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:57,026 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-09-23 10:35:57,079 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-23 10:35:57,110 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-09-23 10:35:57,123 [ scc.config] DEBUG Found github.token 2026-09-23 10:35:57,123 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-09-23 10:35:57,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-09-23 10:35:57,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:57,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-09-23 10:35:57,491 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-09-23 10:35:57,491 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-09-23 10:35:57,491 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-09-23 10:35:57,524 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:35:57,525 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:35:57,562 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-23 10:35:57,716 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-09-23 10:35:57,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:57,930 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 78e55539b68e351ed5ef202854718b49a37729a7' 2026-09-23 10:35:57,992 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-09-23 10:35:58,024 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-09-23 10:35:58,036 [ scc.config] DEBUG Found github.token 2026-09-23 10:35:58,036 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-09-23 10:35:58,036 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-09-23 10:35:58,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:58,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-09-23 10:35:58,337 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:35:58,411 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-09-23 10:35:58,411 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-09-23 10:35:58,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:35:58,747 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:35:58,872 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:35:58,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:35:58,889 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:35:59,003 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:35:59,064 [ scc.git] DEBUG has no local changes 2026-09-23 10:35:59,064 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:35:59,263 [ scc.git] DEBUG [detached HEAD c2fc5f3] merge master -Dorg -Ssuccess-only 2026-09-23 10:35:59,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:35:59,267 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:35:59,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-09-23 10:36:00,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-09-23 10:36:01,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:01,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:02,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:02,534 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:36:03,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-09-23 10:36:03,067 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:36:03,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:04,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:04,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:05,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:05,252 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-09-23 10:36:05,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-09-23 10:36:05,780 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:36:06,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:06,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:07,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:07,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:07,913 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-09-23 10:36:08,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-09-23 10:36:08,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-09-23 10:36:09,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-09-23 10:36:09,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-09-23 10:36:10,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-09-23 10:36:10,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-09-23 10:36:11,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-09-23 10:36:11,507 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:11,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-09-23 10:36:11,508 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:11,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:11,533 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:11,555 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:11,555 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:11,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:11,639 [ scc.git] DEBUG Already up to date. 2026-09-23 10:36:11,639 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-09-23 10:36:12,127 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-09-23 10:36:12,127 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-09-23 10:36:12,154 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-09-23 10:36:12,641 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-09-23 10:36:12,641 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-09-23 10:36:12,668 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-09-23 10:36:13,150 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-09-23 10:36:13,150 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-09-23 10:36:13,178 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:13,178 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:13,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:13,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-09-23 10:36:13,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:13,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-09-23 10:36:13,471 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:13,543 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-09-23 10:36:13,543 [ scc.git] DEBUG package.json | 2 +- 2026-09-23 10:36:13,543 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-09-23 10:36:13,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:13,742 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-09-23 10:36:13,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:13,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-09-23 10:36:13,978 [ scc.git] DEBUG Auto-merging package-lock.json 2026-09-23 10:36:13,978 [ scc.git] DEBUG Auto-merging package.json 2026-09-23 10:36:14,063 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:14,135 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-09-23 10:36:14,136 [ scc.git] DEBUG package.json | 2 +- 2026-09-23 10:36:14,136 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-09-23 10:36:14,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:14,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-09-23 10:36:14,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:14,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-09-23 10:36:14,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:14,707 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:36:14,707 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:36:14,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:14,948 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:15,077 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:15,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:15,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:15,205 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:15,275 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:15,276 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:15,425 [ scc.git] DEBUG [detached HEAD f1891cf] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:15,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:15,426 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:15,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-09-23 10:36:16,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-09-23 10:36:16,313 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:36:16,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:17,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:18,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:36:18,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:19,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:19,116 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:36:19,116 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:19,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-09-23 10:36:19,117 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:19,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:19,138 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:19,157 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:19,157 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:19,177 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:19,232 [ scc.git] DEBUG Already up to date. 2026-09-23 10:36:19,232 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-09-23 10:36:19,781 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-09-23 10:36:19,781 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-09-23 10:36:19,811 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:19,811 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:19,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:19,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-09-23 10:36:19,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:19,868 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-09-23 10:36:20,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:20,169 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:36:20,169 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:36:20,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:20,366 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:20,505 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:20,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:20,521 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:20,651 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:20,709 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:20,709 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:20,836 [ scc.git] DEBUG [detached HEAD c4f5968] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:20,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:20,838 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:21,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-09-23 10:36:21,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-09-23 10:36:21,631 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:21,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-09-23 10:36:21,632 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:21,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:21,652 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:21,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:21,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:21,730 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:22,026 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-09-23 10:36:22,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-09-23 10:36:23,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-09-23 10:36:23,552 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:23,552 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:23,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:23,571 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:23,688 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:23,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:23,705 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:23,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:23,897 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:23,898 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:24,051 [ scc.git] DEBUG [detached HEAD 7803e44] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:24,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:24,053 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:24,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-09-23 10:36:25,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-09-23 10:36:25,083 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:36:25,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:26,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:27,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:36:27,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:28,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:28,093 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:36:28,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-09-23 10:36:29,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-09-23 10:36:29,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:30,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:30,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:31,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:31,236 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-09-23 10:36:31,236 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:31,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-09-23 10:36:31,238 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:31,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:31,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:31,275 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:31,275 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:31,297 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:31,360 [ scc.git] DEBUG Already up to date. 2026-09-23 10:36:31,360 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-09-23 10:36:32,051 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-09-23 10:36:32,051 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-09-23 10:36:32,083 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-09-23 10:36:32,543 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-09-23 10:36:32,543 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-09-23 10:36:32,570 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:32,570 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:32,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:32,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-09-23 10:36:32,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:32,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-09-23 10:36:32,947 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG Auto-merging setup.py 2026-09-23 10:36:32,947 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-09-23 10:36:32,979 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:36:32,980 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:36:33,020 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-09-23 10:36:33,247 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-09-23 10:36:33,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:33,485 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-09-23 10:36:33,520 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-09-23 10:36:33,544 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py --conflicts 2026-09-23 10:36:33,558 [ scc.config] DEBUG Found github.token 2026-09-23 10:36:33,558 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-09-23 10:36:33,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-09-23 10:36:33,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:33,597 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-09-23 10:36:33,839 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:33,928 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:36:33,928 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:36:34,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:34,115 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:34,240 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:34,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:34,255 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:34,367 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:34,439 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:34,439 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:34,576 [ scc.git] DEBUG [detached HEAD c6632aa] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:34,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:34,578 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:34,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-09-23 10:36:35,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-09-23 10:36:35,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-09-23 10:36:36,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-09-23 10:36:37,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:37,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:38,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:38,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:38,722 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-09-23 10:36:38,722 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:38,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-09-23 10:36:38,723 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:38,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:38,745 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:38,767 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:38,767 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:38,788 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:38,980 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-09-23 10:36:39,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-09-23 10:36:40,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-09-23 10:36:41,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-09-23 10:36:41,869 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-09-23 10:36:42,512 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-09-23 10:36:42,512 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-09-23 10:36:42,541 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:42,541 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:42,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:42,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-09-23 10:36:42,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:42,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-09-23 10:36:42,836 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-09-23 10:36:42,913 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:42,999 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-09-23 10:36:42,999 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-09-23 10:36:42,999 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-09-23 10:36:42,999 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-09-23 10:36:42,999 [ scc.git] DEBUG ms/test | 2 ++ 2026-09-23 10:36:42,999 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-09-23 10:36:42,999 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-09-23 10:36:42,999 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-09-23 10:36:42,999 [ scc.git] DEBUG create mode 100755 ms/test 2026-09-23 10:36:43,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:43,201 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:43,351 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:43,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:43,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:43,488 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:43,565 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:43,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:43,714 [ scc.git] DEBUG [detached HEAD 9782632] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:43,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:43,716 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:44,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-09-23 10:36:44,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-09-23 10:36:44,570 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:36:45,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:45,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:46,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:36:46,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:47,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:47,374 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:36:47,374 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:47,374 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-09-23 10:36:47,375 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:47,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:47,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:47,419 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:47,420 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:47,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:47,520 [ scc.git] DEBUG Already up to date. 2026-09-23 10:36:47,521 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-09-23 10:36:48,012 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-09-23 10:36:48,012 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-09-23 10:36:48,044 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:48,044 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:48,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:48,069 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-09-23 10:36:48,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:48,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-09-23 10:36:48,306 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:48,397 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:36:48,397 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:36:48,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:48,584 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:48,720 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:48,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:48,747 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:48,864 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:48,918 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:48,918 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:49,065 [ scc.git] DEBUG [detached HEAD 32979b9] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:49,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:49,067 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:49,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-09-23 10:36:49,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-09-23 10:36:49,910 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:36:50,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:51,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:51,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:36:52,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:52,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:52,754 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:36:52,754 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:36:52,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-09-23 10:36:52,755 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:52,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:52,775 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:36:52,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:36:52,792 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:36:52,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:36:53,001 [ scc.git] DEBUG Updating deab817..160d894 2026-09-23 10:36:53,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-09-23 10:36:53,706 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-09-23 10:36:54,175 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-09-23 10:36:54,175 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-09-23 10:36:54,197 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:36:54,198 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:54,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:54,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-09-23 10:36:54,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:54,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-09-23 10:36:54,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:36:54,531 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:36:54,531 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:36:54,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:36:54,728 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:36:54,862 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:36:54,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:36:54,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:36:54,994 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:36:55,066 [ scc.git] DEBUG has no local changes 2026-09-23 10:36:55,066 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:36:55,219 [ scc.git] DEBUG [detached HEAD 83b0629] merge master -Dorg -Ssuccess-only 2026-09-23 10:36:55,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:36:55,221 [ scc.git] INFO Overriding base-branch from master to main 2026-09-23 10:36:55,221 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:36:55,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-09-23 10:36:56,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-09-23 10:36:56,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-09-23 10:36:57,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:57,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:36:58,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:36:58,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-09-23 10:36:59,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:36:59,278 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-09-23 10:36:59,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-09-23 10:37:00,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-09-23 10:37:00,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-09-23 10:37:01,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:01,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:37:02,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:02,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:37:02,871 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-09-23 10:37:02,871 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:37:02,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-09-23 10:37:02,872 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:02,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:02,892 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-09-23 10:37:02,912 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:37:02,912 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-09-23 10:37:02,936 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-09-23 10:37:03,104 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-09-23 10:37:03,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-09-23 10:37:04,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-09-23 10:37:04,952 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-09-23 10:37:05,638 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-09-23 10:37:05,638 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-09-23 10:37:05,667 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-09-23 10:37:06,514 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-09-23 10:37:06,514 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-09-23 10:37:06,541 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:37:06,541 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:06,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:06,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-09-23 10:37:06,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:06,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-09-23 10:37:06,837 [ scc.git] DEBUG Auto-merging README.rst 2026-09-23 10:37:06,838 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-09-23 10:37:06,838 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-09-23 10:37:06,838 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-09-23 10:37:06,863 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-09-23 10:37:06,864 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-09-23 10:37:06,907 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-09-23 10:37:07,079 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-09-23 10:37:07,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:07,280 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-09-23 10:37:07,306 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-09-23 10:37:07,325 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#84](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-09-23 10:37:07,339 [ scc.config] DEBUG Found github.token 2026-09-23 10:37:07,339 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-09-23 10:37:07,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-09-23 10:37:07,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:07,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-09-23 10:37:07,663 [ scc.git] DEBUG Auto-merging README.rst 2026-09-23 10:37:07,663 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-09-23 10:37:07,741 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:37:07,826 [ scc.git] DEBUG README.rst | 3 + 2026-09-23 10:37:07,826 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-09-23 10:37:07,826 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-09-23 10:37:07,826 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-09-23 10:37:07,826 [ scc.git] DEBUG setup.py | 5 +- 2026-09-23 10:37:07,827 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-09-23 10:37:07,827 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-09-23 10:37:08,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:08,039 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:37:08,170 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:08,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:08,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:37:08,293 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:37:08,369 [ scc.git] DEBUG has no local changes 2026-09-23 10:37:08,369 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:37:08,508 [ scc.git] DEBUG [detached HEAD c6db260] merge master -Dorg -Ssuccess-only 2026-09-23 10:37:08,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:08,510 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:37:08,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-09-23 10:37:09,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-09-23 10:37:09,363 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:37:09,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:10,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:37:11,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:37:11,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:12,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:37:12,087 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:12,087 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:37:12,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-09-23 10:37:12,088 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:12,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:12,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:37:12,124 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:37:12,124 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:37:12,144 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:37:12,201 [ scc.git] DEBUG Already up to date. 2026-09-23 10:37:12,202 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-09-23 10:37:12,780 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-09-23 10:37:12,780 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-09-23 10:37:12,807 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:37:12,807 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:12,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:12,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-09-23 10:37:12,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:12,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-09-23 10:37:13,097 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:37:13,174 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:37:13,174 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:37:13,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:13,371 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:37:13,488 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:13,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:13,503 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:37:13,612 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:37:13,662 [ scc.git] DEBUG has no local changes 2026-09-23 10:37:13,662 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:37:13,810 [ scc.git] DEBUG [detached HEAD d2a5d02] merge master -Dorg -Ssuccess-only 2026-09-23 10:37:13,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:13,812 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:37:14,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-09-23 10:37:14,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-09-23 10:37:14,652 [ scc.repo] DEBUG # ... Include label: dependencies 2026-09-23 10:37:15,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:15,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:37:16,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:37:16,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:17,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:37:17,280 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:17,280 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:37:17,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-09-23 10:37:17,281 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:17,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:17,298 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:37:17,316 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:37:17,316 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:37:17,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:37:17,401 [ scc.git] DEBUG Already up to date. 2026-09-23 10:37:17,401 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-09-23 10:37:18,035 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-09-23 10:37:18,035 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-09-23 10:37:18,059 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:37:18,059 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:18,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:18,107 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-09-23 10:37:18,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:18,142 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-09-23 10:37:18,341 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:37:18,424 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-09-23 10:37:18,424 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-09-23 10:37:18,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:18,617 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:37:18,750 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:18,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:18,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:37:18,900 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:37:18,973 [ scc.git] DEBUG has no local changes 2026-09-23 10:37:18,973 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:37:19,190 [ scc.git] DEBUG [detached HEAD b2a60c4] merge master -Dorg -Ssuccess-only 2026-09-23 10:37:19,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:19,192 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:37:19,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-09-23 10:37:19,408 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:37:19,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-09-23 10:37:19,409 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:19,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:19,427 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-09-23 10:37:19,448 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:37:19,448 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-09-23 10:37:19,473 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-09-23 10:37:19,537 [ scc.git] DEBUG Already up to date. 2026-09-23 10:37:19,537 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:37:19,537 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:19,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:19,554 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:37:19,684 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:19,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:19,697 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:37:19,834 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:37:19,958 [ scc.git] DEBUG has no local changes 2026-09-23 10:37:19,958 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:37:20,140 [ scc.git] DEBUG [detached HEAD 484fc0b] merge master -Dorg -Ssuccess-only 2026-09-23 10:37:20,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:20,143 [ scc.git] INFO Overriding base-branch from master to develop 2026-09-23 10:37:20,143 [ scc.repo] DEBUG ## PRs found: 2026-09-23 10:37:20,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-09-23 10:37:21,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-09-23 10:37:22,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:23,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-09-23 10:37:23,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-09-23 10:37:24,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-09-23 10:37:24,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-09-23 10:37:24,860 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-09-23 10:37:24,861 [ scc.repo] DEBUG ## Branches found: 2026-09-23 10:37:24,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-09-23 10:37:24,862 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:24,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:24,881 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-09-23 10:37:24,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-09-23 10:37:24,898 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-09-23 10:37:24,991 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-09-23 10:37:25,318 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-09-23 10:37:25,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-09-23 10:37:26,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-09-23 10:37:27,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-09-23 10:37:28,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-09-23 10:37:29,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-09-23 10:37:30,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-09-23 10:37:30,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-09-23 10:37:30,831 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-09-23 10:37:31,407 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-09-23 10:37:31,407 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-09-23 10:37:31,436 [ scc.git] DEBUG ## Unique users: [] 2026-09-23 10:37:31,436 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:31,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:31,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-09-23 10:37:31,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:31,524 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-09-23 10:37:31,781 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-09-23 10:37:31,854 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-09-23 10:37:31,854 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-09-23 10:37:32,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:32,045 [ scc.git] DEBUG Calling 'git submodule update' 2026-09-23 10:37:32,175 [ scc.git] DEBUG Get sha1 of %s 2026-09-23 10:37:32,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-09-23 10:37:32,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:37:32,301 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:37:32,363 [ scc.git] DEBUG has no local changes 2026-09-23 10:37:32,363 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:37:32,543 [ scc.git] DEBUG [detached HEAD a269f14] merge master -Dorg -Ssuccess-only 2026-09-23 10:37:32,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:32,546 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-09-23 10:37:32,794 [ scc.config] DEBUG Found submodule.figure.url 2026-09-23 10:37:32,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:33,016 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-09-23 10:37:33,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:33,443 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-09-23 10:37:33,452 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-09-23 10:37:33,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:33,884 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-09-23 10:37:33,892 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-09-23 10:37:34,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:34,320 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-09-23 10:37:34,329 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-09-23 10:37:34,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:34,770 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-09-23 10:37:35,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:35,217 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-09-23 10:37:35,225 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-09-23 10:37:35,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:35,703 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-09-23 10:37:35,712 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-09-23 10:37:36,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:36,153 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-09-23 10:37:36,161 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-09-23 10:37:36,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:36,615 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-09-23 10:37:36,622 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-09-23 10:37:37,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:37,062 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-09-23 10:37:37,071 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-09-23 10:37:37,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:37,511 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-09-23 10:37:37,521 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-09-23 10:37:37,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:37,983 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-09-23 10:37:37,995 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-09-23 10:37:38,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:38,422 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-09-23 10:37:38,434 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-09-23 10:37:38,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:38,883 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-09-23 10:37:39,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:39,368 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-09-23 10:37:39,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:39,818 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-09-23 10:37:39,830 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-09-23 10:37:40,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:40,293 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-09-23 10:37:40,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:40,735 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-09-23 10:37:41,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:41,176 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-09-23 10:37:41,187 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-09-23 10:37:41,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:41,618 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-09-23 10:37:41,631 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-09-23 10:37:42,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:42,070 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-09-23 10:37:42,079 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-09-23 10:37:42,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:42,508 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-09-23 10:37:42,522 [ scc.config] DEBUG Found submodule.scripts.url 2026-09-23 10:37:42,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-09-23 10:37:42,950 [ scc.config] DEBUG Found submodule.scripts.branch 2026-09-23 10:37:42,950 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-09-23 10:37:45,346 [ scc.git] DEBUG has local changes 2026-09-23 10:37:45,346 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/figure Excluded PRs: - PR 12 will-moore 'Browser based export' (stage: draft) - PR 9 will-moore 'Save omezarr collection' (stage: draft) Already up to date. Merged PRs: - PR 5 will-moore 'Add sample_figures/ngff_images_figure.json' - PR 14 will-moore 'App served by omero env' - PR 15 will-moore 'Replace navbar 'OMERO' with 'figure' and OME logo' - PR 17 Rdornier 'Do not crop rotated panel at export' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..d5f88d8 Previously merged: - PR 193 dominikl 'Only parse import uris if stated' - PR 182 will-moore 'Revert "Remove support for Plate import"' - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' - PR 197 pwalczysko 'Fix pragma' - PR 196 will-moore 'Storage options only if needed' - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Repository: ome/omero-figure Updating 9cc36cde..3195c3df Previously merged: - PR 704 jburel 'Revert commit 49ae9c9' - PR 703 will-moore 'Readme remove rc' - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' - PR 692 will-moore 'colorbar lut background fix' - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 706 will-moore 'Figure repo migration' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..6c554250 Previously merged: - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' - PR 565 dependabot[bot] 'Bump qs and body-parser' - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' - PR 567 will-moore 'Basic fix of prev/next shapes when shapes sorted' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) - PR 74 will-moore 'mapr extension of webclient' (exclude comment) Already up to date. Merged PRs: - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' - PR 98 JoshuaFortriede 'use namespace with keys' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#84 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/84/)' 2026-09-23 10:37:45,933 [ scc.git] DEBUG [detached HEAD 18c040d] merge master -Dorg -Ssuccess-only 2026-09-23 10:37:45,933 [ scc.git] DEBUG 24 files changed, 46 insertions(+), 46 deletions(-) 2026-09-23 10:37:45,934 [ scc.merge] INFO Repository: ome/omero-plugins 2026-09-23 10:37:45,934 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,934 [ scc.merge] INFO 2026-09-23 10:37:45,934 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,934 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-09-23 10:37:45,934 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Repository: ome/figure 2026-09-23 10:37:45,935 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 12 will-moore 'Browser based export' (stage: draft) 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 9 will-moore 'Save omezarr collection' (stage: draft) 2026-09-23 10:37:45,935 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 5 will-moore 'Add sample_figures/ngff_images_figure.json' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 14 will-moore 'App served by omero env' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 15 will-moore 'Replace navbar 'OMERO' with 'figure' and OME logo' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 17 Rdornier 'Do not crop rotated panel at export' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-09-23 10:37:45,935 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-09-23 10:37:45,935 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-09-23 10:37:45,935 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-09-23 10:37:45,935 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-09-23 10:37:45,935 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-09-23 10:37:45,935 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-09-23 10:37:45,935 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-09-23 10:37:45,935 [ scc.merge] INFO Updating 11d3587..d5f88d8 2026-09-23 10:37:45,935 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 197 pwalczysko 'Fix pragma' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,935 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-09-23 10:37:45,935 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-09-23 10:37:45,935 [ scc.merge] INFO 2026-09-23 10:37:45,936 [ scc.merge] INFO Repository: ome/omero-figure 2026-09-23 10:37:45,936 [ scc.merge] INFO Updating 9cc36cde..3195c3df 2026-09-23 10:37:45,936 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 704 jburel 'Revert commit 49ae9c9' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 703 will-moore 'Readme remove rc' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:37:45,936 [ scc.merge] INFO 2026-09-23 10:37:45,936 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 706 will-moore 'Figure repo migration' 2026-09-23 10:37:45,936 [ scc.merge] INFO 2026-09-23 10:37:45,936 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-09-23 10:37:45,936 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,936 [ scc.merge] INFO 2026-09-23 10:37:45,936 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-09-23 10:37:45,936 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,936 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Repository: ome/omero-gallery 2026-09-23 10:37:45,937 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,937 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-09-23 10:37:45,937 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-09-23 10:37:45,937 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-09-23 10:37:45,937 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-09-23 10:37:45,937 [ scc.merge] INFO Updating 7a798cee..6c554250 2026-09-23 10:37:45,937 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 562 will-moore 'Keyboard select roi' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 563 will-moore 'Use POST data for imgRdef save' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 559 dependabot[bot] 'Bump js-yaml and mocha' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:37:45,937 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 564 dependabot[bot] 'Bump fast-uri from 3.1.5 to 3.1.7' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 565 dependabot[bot] 'Bump qs and body-parser' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 566 dependabot[bot] 'Bump js-yaml from 4.1.0 to 4.3.2' 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 567 will-moore 'Basic fix of prev/next shapes when shapes sorted' 2026-09-23 10:37:45,937 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-09-23 10:37:45,937 [ scc.merge] INFO 2026-09-23 10:37:45,937 [ scc.merge] INFO Repository: ome/omero-mapr 2026-09-23 10:37:45,937 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,937 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' (exclude comment) 2026-09-23 10:37:45,938 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 97 JoshuaFortriede 'BUG Fix: use HTML value to replace HTML' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 98 JoshuaFortriede 'use namespace with keys' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Repository: ome/omero-metadata 2026-09-23 10:37:45,938 [ scc.merge] INFO Updating 3cd120c..6a653e4 2026-09-23 10:37:45,938 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Repository: ome/omero-parade 2026-09-23 10:37:45,938 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-09-23 10:37:45,938 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-09-23 10:37:45,938 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Repository: ome/omero-rois 2026-09-23 10:37:45,938 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-09-23 10:37:45,938 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-09-23 10:37:45,938 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Repository: ome/omero-signup 2026-09-23 10:37:45,938 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-09-23 10:37:45,938 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-09-23 10:37:45,938 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-09-23 10:37:45,938 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-09-23 10:37:45,938 [ scc.merge] INFO 2026-09-23 10:37:45,938 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,938 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: ome/omero-upload 2026-09-23 10:37:45,939 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-09-23 10:37:45,939 [ scc.merge] INFO Updating deab817..160d894 2026-09-23 10:37:45,939 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-09-23 10:37:45,939 [ scc.merge] INFO Excluded PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-09-23 10:37:45,939 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-09-23 10:37:45,939 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Conflicting PRs (not included): 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-09-23 10:37:45,939 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-09-23 10:37:45,939 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-09-23 10:37:45,939 [ scc.merge] INFO Already up to date. 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Repository: ome/scripts 2026-09-23 10:37:45,939 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-09-23 10:37:45,939 [ scc.merge] INFO Previously merged: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] INFO Merged PRs: 2026-09-23 10:37:45,939 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-09-23 10:37:45,939 [ scc.merge] INFO 2026-09-23 10:37:45,939 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-09-23 10:37:45,939 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:45,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/figure 2026-09-23 10:37:45,952 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:45,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:45,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-09-23 10:37:45,969 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:45,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:45,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-09-23 10:37:45,988 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-09-23 10:37:46,003 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-09-23 10:37:46,017 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-09-23 10:37:46,033 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-09-23 10:37:46,048 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-09-23 10:37:46,066 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-09-23 10:37:46,084 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-09-23 10:37:46,102 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-09-23 10:37:46,121 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-09-23 10:37:46,142 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-09-23 10:37:46,159 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-09-23 10:37:46,176 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-09-23 10:37:46,193 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-09-23 10:37:46,211 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-09-23 10:37:46,229 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-09-23 10:37:46,245 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-09-23 10:37:46,262 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-09-23 10:37:46,284 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-09-23 10:37:46,301 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-09-23 10:37:46,320 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-09-23 10:37:46,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-09-23 10:37:46,341 [ scc.git] DEBUG Calling 'git remote' 2026-09-23 10:37:46,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/figure/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/figure/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'figure' Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'figure' HEAD detached from 3935875 nothing to commit, working tree clean Entering 'minimal-omero-client' [detached HEAD 20d0564] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add ..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 2ef1121] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-09-23 10:39:00,356 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-09-23 10:39:10,995 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-09-23 10:39:13,927 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-23 10:39:19,517 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-09-23 10:40:20,949 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS