Started by upstream project "Trigger" build number 635 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b68c3cf06205611a43f501104408df0df16649d6 (refs/remotes/origin/master) Commit message: "Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 > git rev-list --no-walk b68c3cf06205611a43f501104408df0df16649d6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 561 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.1-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-46.0.1-cp311-abi3-manylinux_2_34_x86_64.whl (4.6 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.14-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-46.0.1 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.14 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-09-30 00:19:58,261 [ scc.config] DEBUG Found github.token 2025-09-30 00:19:58,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-30 00:19:58,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:19:58,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:19:59,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-30 00:19:59,271 [ scc.gh] DEBUG 4399 remaining from 5000 (Reset at 01:09 2025-09-30 00:19:59,272 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:19:59,274 [ scc.git] DEBUG Check current status 2025-09-30 00:19:59,274 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:19:59,276 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-09-30 00:19:59,276 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:19:59,313 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-30 00:19:59,316 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-30 00:19:59,324 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-09-30 00:19:59,328 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-30 00:19:59,332 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-30 00:19:59,334 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:19:59,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-09-30 00:20:00,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:00,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:01,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:01,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:01,482 [ scc.git] DEBUG Resetting... 2025-09-30 00:20:01,482 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-30 00:20:01,486 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-09-30 00:20:01,486 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-30 00:20:01,534 [ scc.git] DEBUG Check current status 2025-09-30 00:20:01,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:01,536 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c 2025-09-30 00:20:01,536 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:01,574 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-30 00:20:01,577 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-30 00:20:01,584 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-09-30 00:20:01,588 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-30 00:20:01,592 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-30 00:20:01,592 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-30 00:20:01,592 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-30 00:20:01,592 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-30 00:20:01,592 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-30 00:20:01,592 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-30 00:20:01,592 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:20:01,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-09-30 00:20:02,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/333 HTTP/1.1" 200 None 2025-09-30 00:20:02,477 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-30 00:20:02,477 [ scc.repo] DEBUG - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-09-30 00:20:02,477 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:20:02,477 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:02,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:02,479 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-30 00:20:02,481 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:20:02,481 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-30 00:20:02,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-30 00:20:02,486 [ scc.git] DEBUG Already up to date. 2025-09-30 00:20:02,486 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head' 2025-09-30 00:20:02,784 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-09-30 00:20:02,784 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD 2025-09-30 00:20:02,790 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:20:02,790 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:02,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:02,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-09-30 00:20:02,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:02,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 333 (Bump omero-marshal from `6d44f66` to `57934f0`) 4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-09-30 00:20:02,803 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:20:02,805 [ scc.git] DEBUG omero-marshal | 2 +- 2025-09-30 00:20:02,805 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-30 00:20:02,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:02,955 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:20:03,001 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out '57934f0fd75d0a3091d06b5e943094a27c56f328' 2025-09-30 00:20:03,001 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:03,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:03,003 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:20:03,032 [ scc.git] DEBUG has no local changes 2025-09-30 00:20:03,032 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:20:03,053 [ scc.git] DEBUG [detached HEAD 488150d] merge master -Dorg -Snone 2025-09-30 00:20:03,053 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-09-30 00:20:03,053 [ scc.merge] INFO Already up to date. 2025-09-30 00:20:03,053 [ scc.merge] INFO 2025-09-30 00:20:03,053 [ scc.merge] INFO Merged PRs: 2025-09-30 00:20:03,053 [ scc.merge] INFO - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-09-30 00:20:03,053 [ scc.merge] INFO 2025-09-30 00:20:03,053 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-30 00:20:03,053 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-09-30 00:20:04,982 [ scc.config] DEBUG Found github.token 2025-09-30 00:20:04,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-30 00:20:05,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:05,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:05,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-30 00:20:05,955 [ scc.gh] DEBUG 4389 remaining from 5000 (Reset at 01:09 2025-09-30 00:20:05,955 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:20:05,957 [ scc.git] DEBUG Check current status 2025-09-30 00:20:05,958 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:05,960 [ scc.git] DEBUG 488150d merge master -Dorg -Snone 2025-09-30 00:20:05,960 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:05,997 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-30 00:20:06,000 [ scc.git] DEBUG 57934f0fd75d0a3091d06b5e943094a27c56f328 omero-marshal (v0.9.0-15-g57934f0) 2025-09-30 00:20:06,008 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-09-30 00:20:06,011 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-30 00:20:06,015 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-30 00:20:06,018 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:20:06,018 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-09-30 00:20:06,019 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-09-30 00:20:06,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-09-30 00:20:06,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:07,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:07,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:08,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:08,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:08,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-30 00:20:08,216 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:20:08,218 [ scc.git] DEBUG Check current status 2025-09-30 00:20:08,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:08,220 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-09-30 00:20:08,221 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:08,257 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:20:08,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-09-30 00:20:09,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:09,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:10,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:10,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:10,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:10,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:10,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-30 00:20:10,471 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:20:10,473 [ scc.git] DEBUG Check current status 2025-09-30 00:20:10,473 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:10,476 [ scc.git] DEBUG 57934f0 Merge pull request #85 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-30 00:20:10,476 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:10,513 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:20:10,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-09-30 00:20:11,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:11,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:12,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:12,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:12,694 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:12,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:12,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-30 00:20:12,731 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:20:12,733 [ scc.git] DEBUG Check current status 2025-09-30 00:20:12,733 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:12,735 [ scc.git] DEBUG 780876c5 Merge pull request #443 from sbesson/gateway_tests_fake 2025-09-30 00:20:12,735 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:12,773 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:20:13,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-09-30 00:20:13,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:14,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:14,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:14,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:14,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:14,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:14,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-30 00:20:14,941 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:20:14,942 [ scc.git] DEBUG Check current status 2025-09-30 00:20:14,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:14,945 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-30 00:20:14,945 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:14,983 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:20:14,983 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-09-30 00:20:15,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-09-30 00:20:15,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:16,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:16,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:17,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:17,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:17,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:17,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-30 00:20:17,289 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-30 00:20:17,291 [ scc.git] DEBUG Check current status 2025-09-30 00:20:17,291 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:17,293 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-09-30 00:20:17,293 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:17,329 [ scc.config] DEBUG Found remote.origin.url 2025-09-30 00:20:17,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-09-30 00:20:18,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-30 00:20:18,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-30 00:20:19,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-30 00:20:19,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-30 00:20:19,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:19,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:19,474 [ scc.git] DEBUG Resetting... 2025-09-30 00:20:19,474 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-30 00:20:19,477 [ scc.git] DEBUG HEAD is now at 488150d merge master -Dorg -Snone 2025-09-30 00:20:19,477 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-30 00:20:19,525 [ scc.git] DEBUG Check current status 2025-09-30 00:20:19,525 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-30 00:20:19,527 [ scc.git] DEBUG 488150d merge master -Dorg -Snone 2025-09-30 00:20:19,527 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-30 00:20:19,563 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-30 00:20:19,566 [ scc.git] DEBUG 57934f0fd75d0a3091d06b5e943094a27c56f328 omero-marshal (v0.9.0-15-g57934f0) 2025-09-30 00:20:19,573 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5) 2025-09-30 00:20:19,577 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-30 00:20:19,581 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-30 00:20:19,581 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-30 00:20:19,581 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-30 00:20:19,582 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-30 00:20:19,582 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-30 00:20:19,582 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-30 00:20:19,582 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-30 00:20:19,582 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:20:19,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-09-30 00:20:20,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/333 HTTP/1.1" 200 None 2025-09-30 00:20:20,392 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-30 00:20:21,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9 HTTP/1.1" 200 None 2025-09-30 00:20:21,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:22,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9 HTTP/1.1" 200 None 2025-09-30 00:20:22,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:22,545 [ scc.repo] DEBUG - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-09-30 00:20:22,545 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:20:22,545 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:22,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:22,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-30 00:20:22,549 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:20:22,549 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-30 00:20:22,551 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-30 00:20:22,554 [ scc.git] DEBUG Already up to date. 2025-09-30 00:20:22,554 [ scc.git] DEBUG Calling 'git fetch origin pull/333/head' 2025-09-30 00:20:22,859 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-09-30 00:20:22,859 [ scc.git] DEBUG * branch refs/pull/333/head -> FETCH_HEAD 2025-09-30 00:20:22,864 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:20:22,864 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:22,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:22,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-09-30 00:20:22,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:22,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 333 (Bump omero-marshal from `6d44f66` to `57934f0`) 4e34f39c88ec1cbd7ec42af90e516d68f02a1ba9' 2025-09-30 00:20:22,872 [ scc.git] DEBUG Already up to date. 2025-09-30 00:20:23,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:23,017 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:20:23,055 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:23,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:23,057 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:20:23,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-09-30 00:20:24,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/26 HTTP/1.1" 200 None 2025-09-30 00:20:24,054 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-30 00:20:24,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-09-30 00:20:25,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:25,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:20:26,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-09-30 00:20:26,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/38aa63d7d4014725060e4ecaa159922370485c5a?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:26,740 [ scc.repo] DEBUG - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-30 00:20:27,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-09-30 00:20:27,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-09-30 00:20:28,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-09-30 00:20:28,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:29,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-09-30 00:20:29,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:29,620 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-09-30 00:20:29,620 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:20:29,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-30 00:20:29,620 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:29,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:29,622 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-30 00:20:29,624 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:20:29,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-30 00:20:29,627 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-30 00:20:29,630 [ scc.git] DEBUG Already up to date. 2025-09-30 00:20:29,630 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-09-30 00:20:29,926 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-09-30 00:20:29,926 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-09-30 00:20:29,930 [ scc.git] DEBUG Calling 'git fetch origin pull/26/head' 2025-09-30 00:20:30,215 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-09-30 00:20:30,215 [ scc.git] DEBUG * branch refs/pull/26/head -> FETCH_HEAD 2025-09-30 00:20:30,219 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:20:30,219 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:30,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:30,221 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-09-30 00:20:30,224 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:30,226 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-09-30 00:20:30,352 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-09-30 00:20:30,353 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-09-30 00:20:30,356 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-09-30 00:20:30,356 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-09-30 00:20:30,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:30,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38aa63d7d4014725060e4ecaa159922370485c5a' 2025-09-30 00:20:30,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:30,524 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 26 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38aa63d7d4014725060e4ecaa159922370485c5a' 2025-09-30 00:20:30,532 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:20:30,534 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-30 00:20:30,534 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-30 00:20:30,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:30,909 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:20:30,946 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:30,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:30,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:30,983 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:20:30,987 [ scc.git] DEBUG has no local changes 2025-09-30 00:20:30,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:20:30,993 [ scc.git] DEBUG [detached HEAD 2c5ebbd] merge master -Dorg -Ssuccess-only 2025-09-30 00:20:30,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:30,993 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:20:31,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-09-30 00:20:31,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-09-30 00:20:32,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-09-30 00:20:32,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-09-30 00:20:33,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-09-30 00:20:33,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-09-30 00:20:34,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:35,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-09-30 00:20:35,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:35,538 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-09-30 00:20:35,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-09-30 00:20:36,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-09-30 00:20:36,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-09-30 00:20:37,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-09-30 00:20:37,348 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:20:37,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-30 00:20:37,348 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:37,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:37,350 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-30 00:20:37,352 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:20:37,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-30 00:20:37,354 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-30 00:20:37,357 [ scc.git] DEBUG Already up to date. 2025-09-30 00:20:37,357 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-09-30 00:20:37,646 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-09-30 00:20:37,646 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-09-30 00:20:37,650 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:20:37,650 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:37,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:37,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-09-30 00:20:37,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:37,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-09-30 00:20:37,665 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-09-30 00:20:37,665 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:20:37,668 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-09-30 00:20:37,668 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-09-30 00:20:37,668 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-09-30 00:20:37,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:20:37,810 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:20:37,845 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:37,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:37,847 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:20:37,881 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:20:37,884 [ scc.git] DEBUG has no local changes 2025-09-30 00:20:37,884 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:20:37,890 [ scc.git] DEBUG [detached HEAD ebdec51] merge master -Dorg -Ssuccess-only 2025-09-30 00:20:37,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:20:37,891 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:20:38,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-09-30 00:20:38,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/478 HTTP/1.1" 200 None 2025-09-30 00:20:39,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/478/comments HTTP/1.1" 200 None 2025-09-30 00:20:40,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68 HTTP/1.1" 200 None 2025-09-30 00:20:40,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:41,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:20:41,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68 HTTP/1.1" 200 None 2025-09-30 00:20:41,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/9355ba49bedb4707025593d1092550fa82550d68?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:42,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68 HTTP/1.1" 200 None 2025-09-30 00:20:42,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/9355ba49bedb4707025593d1092550fa82550d68/status HTTP/1.1" 200 None 2025-09-30 00:20:42,799 [ scc.repo] DEBUG - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' 2025-09-30 00:20:43,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-09-30 00:20:43,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-09-30 00:20:44,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-09-30 00:20:44,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-09-30 00:20:45,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-09-30 00:20:45,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-09-30 00:20:46,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-09-30 00:20:46,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-09-30 00:20:47,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:47,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-09-30 00:20:47,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:47,972 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-09-30 00:20:48,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-09-30 00:20:49,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-09-30 00:20:49,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-09-30 00:20:50,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:50,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:20:50,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-09-30 00:20:51,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-09-30 00:20:52,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-09-30 00:20:52,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:52,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-09-30 00:20:53,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:53,326 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-09-30 00:20:53,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-09-30 00:20:54,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-09-30 00:20:54,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-09-30 00:20:55,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:55,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-09-30 00:20:56,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:56,143 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-09-30 00:20:56,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-09-30 00:20:57,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-09-30 00:20:57,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-09-30 00:20:58,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-09-30 00:20:58,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-09-30 00:20:59,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:20:59,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-09-30 00:20:59,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:20:59,880 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-09-30 00:20:59,881 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:20:59,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-30 00:20:59,881 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:20:59,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:20:59,884 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-30 00:20:59,886 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:20:59,886 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-30 00:20:59,889 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-30 00:20:59,891 [ scc.git] DEBUG Already up to date. 2025-09-30 00:20:59,891 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-09-30 00:21:00,202 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-30 00:21:00,202 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-09-30 00:21:00,206 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-09-30 00:21:00,493 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-30 00:21:00,493 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-09-30 00:21:00,496 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-09-30 00:21:00,793 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-30 00:21:00,793 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-09-30 00:21:00,797 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-09-30 00:21:01,085 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-30 00:21:01,085 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-09-30 00:21:01,090 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2025-09-30 00:21:01,379 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-30 00:21:01,379 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2025-09-30 00:21:01,384 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:21:01,384 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:21:01,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:01,386 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-09-30 00:21:01,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:01,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-09-30 00:21:01,419 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-09-30 00:21:01,419 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-09-30 00:21:01,421 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:21:01,424 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-09-30 00:21:01,424 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-09-30 00:21:01,424 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-09-30 00:21:01,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:01,573 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-09-30 00:21:01,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:01,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-09-30 00:21:01,603 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:21:01,605 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-09-30 00:21:01,605 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-09-30 00:21:01,605 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-09-30 00:21:01,606 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-09-30 00:21:01,606 [ scc.git] DEBUG create mode 100644 connect.py 2025-09-30 00:21:01,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:01,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-09-30 00:21:01,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:01,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-09-30 00:21:02,007 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-09-30 00:21:02,007 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:21:02,011 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-09-30 00:21:02,011 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-09-30 00:21:02,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:02,391 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-09-30 00:21:02,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:02,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-09-30 00:21:02,433 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-09-30 00:21:02,434 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:21:02,440 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-09-30 00:21:02,440 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-09-30 00:21:02,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:02,786 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9355ba49bedb4707025593d1092550fa82550d68' 2025-09-30 00:21:02,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:02,800 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Remove Python 2 compat from gateway utilities and scripts tests) 9355ba49bedb4707025593d1092550fa82550d68' 2025-09-30 00:21:02,821 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:21:02,824 [ scc.git] DEBUG src/omero/gateway/utils.py | 9 +-------- 2025-09-30 00:21:02,824 [ scc.git] DEBUG test/unit/scriptstest/test_parse.py | 6 ------ 2025-09-30 00:21:02,825 [ scc.git] DEBUG 2 files changed, 1 insertion(+), 14 deletions(-) 2025-09-30 00:21:03,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:03,179 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:21:03,216 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:21:03,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:03,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:21:03,252 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:21:03,258 [ scc.git] DEBUG has no local changes 2025-09-30 00:21:03,258 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:21:03,264 [ scc.git] DEBUG [detached HEAD bdf20050] merge master -Dorg -Ssuccess-only 2025-09-30 00:21:03,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:21:03,265 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-30 00:21:03,265 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:21:03,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-09-30 00:21:04,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-09-30 00:21:04,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-09-30 00:21:05,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-30 00:21:05,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:06,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:06,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-30 00:21:07,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:21:07,196 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-30 00:21:07,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-09-30 00:21:08,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-09-30 00:21:08,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-30 00:21:09,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:09,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-30 00:21:10,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:21:10,019 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-30 00:21:10,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-09-30 00:21:10,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-09-30 00:21:11,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-09-30 00:21:11,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-09-30 00:21:11,934 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:21:11,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-30 00:21:11,934 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:21:11,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:11,936 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-09-30 00:21:11,938 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:21:11,938 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-09-30 00:21:11,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-09-30 00:21:11,944 [ scc.git] DEBUG Already up to date. 2025-09-30 00:21:11,944 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-09-30 00:21:12,244 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-09-30 00:21:12,244 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-09-30 00:21:12,248 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-09-30 00:21:12,528 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-09-30 00:21:12,528 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-09-30 00:21:12,533 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:21:12,533 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:21:12,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:12,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-30 00:21:12,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:12,542 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-30 00:21:12,551 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-09-30 00:21:12,551 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-30 00:21:12,551 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-30 00:21:12,553 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-09-30 00:21:12,557 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-30 00:21:12,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:12,710 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-30 00:21:12,715 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-09-30 00:21:12,719 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#533](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-09-30 00:21:12,721 [ scc.config] DEBUG Found github.token 2025-09-30 00:21:12,721 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-09-30 00:21:12,721 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-30 00:21:12,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:12,727 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-30 00:21:12,735 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:21:12,737 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-09-30 00:21:12,737 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-09-30 00:21:13,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:21:13,122 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:21:13,157 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:21:13,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:21:13,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:21:13,194 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:21:13,197 [ scc.git] DEBUG has no local changes 2025-09-30 00:21:13,197 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:21:13,203 [ scc.git] DEBUG [detached HEAD c4c00f5] merge master -Dorg -Ssuccess-only 2025-09-30 00:21:13,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:21:13,203 [ scc.repo] DEBUG ## PRs found: 2025-09-30 00:21:13,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-09-30 00:21:14,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/635 HTTP/1.1" 200 None 2025-09-30 00:21:14,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/635/comments HTTP/1.1" 200 None 2025-09-30 00:21:15,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb HTTP/1.1" 200 None 2025-09-30 00:21:15,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:16,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:16,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb HTTP/1.1" 200 None 2025-09-30 00:21:17,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/7446a144da7db207d65373456bf9347cc0a3dadb?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:17,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb HTTP/1.1" 200 None 2025-09-30 00:21:18,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/7446a144da7db207d65373456bf9347cc0a3dadb/status HTTP/1.1" 200 None 2025-09-30 00:21:18,067 [ scc.repo] DEBUG - PR 635 will-moore 'Marshal annotations roi shape' 2025-09-30 00:21:18,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-09-30 00:21:19,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-09-30 00:21:19,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-30 00:21:20,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:20,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:21,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-30 00:21:21,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:21,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-30 00:21:22,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-09-30 00:21:22,392 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-09-30 00:21:22,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-09-30 00:21:23,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-30 00:21:23,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:24,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:24,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-30 00:21:25,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:25,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-30 00:21:26,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-09-30 00:21:26,267 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-09-30 00:21:26,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-09-30 00:21:27,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-09-30 00:21:27,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-09-30 00:21:28,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:28,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:29,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-09-30 00:21:29,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/189a10758bce63c40d0fe73d490cc489623a6ceb?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:30,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb HTTP/1.1" 200 None 2025-09-30 00:21:30,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/189a10758bce63c40d0fe73d490cc489623a6ceb/status HTTP/1.1" 200 None 2025-09-30 00:21:30,718 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-09-30 00:21:31,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-09-30 00:21:31,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-09-30 00:21:32,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-30 00:21:32,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:33,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:33,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-30 00:21:34,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:34,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-30 00:21:34,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-09-30 00:21:34,958 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-09-30 00:21:35,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-09-30 00:21:35,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-09-30 00:21:36,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-30 00:21:36,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:37,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:37,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-30 00:21:38,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:38,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-30 00:21:39,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-09-30 00:21:39,299 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-09-30 00:21:39,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-09-30 00:21:40,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-30 00:21:40,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:41,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:41,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-30 00:21:42,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:42,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-30 00:21:43,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-09-30 00:21:43,244 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-09-30 00:21:43,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-09-30 00:21:44,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-09-30 00:21:44,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-30 00:21:45,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:45,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:46,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-30 00:21:46,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:46,809 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2025-09-30 00:21:47,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-30 00:21:47,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-09-30 00:21:47,486 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-09-30 00:21:47,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-09-30 00:21:48,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-09-30 00:21:49,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-30 00:21:49,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:50,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-30 00:21:50,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-30 00:21:51,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:51,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-30 00:21:52,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-09-30 00:21:52,298 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-09-30 00:21:52,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-09-30 00:21:53,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-09-30 00:21:53,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-09-30 00:21:54,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-09-30 00:21:54,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-09-30 00:21:55,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:55,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-09-30 00:21:56,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:21:56,070 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-09-30 00:21:56,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-09-30 00:21:57,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-09-30 00:21:57,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-09-30 00:21:58,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:21:58,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-09-30 00:21:58,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:21:58,983 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-09-30 00:21:59,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-09-30 00:21:59,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-09-30 00:22:00,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-09-30 00:22:01,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-30 00:22:01,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-09-30 00:22:01,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-09-30 00:22:01,992 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-09-30 00:22:01,992 [ scc.repo] DEBUG ## Branches found: 2025-09-30 00:22:01,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-30 00:22:01,992 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:22:01,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:01,995 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-30 00:22:01,997 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-30 00:22:01,997 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-30 00:22:02,001 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-30 00:22:02,004 [ scc.git] DEBUG Already up to date. 2025-09-30 00:22:02,004 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-09-30 00:22:02,308 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:02,308 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-09-30 00:22:02,312 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-09-30 00:22:02,598 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:02,598 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-09-30 00:22:02,601 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-09-30 00:22:02,889 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:02,889 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-09-30 00:22:02,892 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-09-30 00:22:03,177 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:03,177 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-09-30 00:22:03,181 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-09-30 00:22:03,474 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:03,474 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-09-30 00:22:03,478 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-09-30 00:22:03,759 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:03,759 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-09-30 00:22:03,763 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-09-30 00:22:04,059 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:04,059 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-09-30 00:22:04,063 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-09-30 00:22:04,344 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:04,344 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-09-30 00:22:04,348 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-09-30 00:22:04,631 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:04,631 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-09-30 00:22:04,635 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-09-30 00:22:04,922 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:04,922 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-09-30 00:22:04,926 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-09-30 00:22:05,201 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:05,201 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-09-30 00:22:05,205 [ scc.git] DEBUG Calling 'git fetch origin pull/635/head' 2025-09-30 00:22:05,493 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-30 00:22:05,493 [ scc.git] DEBUG * branch refs/pull/635/head -> FETCH_HEAD 2025-09-30 00:22:05,496 [ scc.git] DEBUG ## Unique users: [] 2025-09-30 00:22:05,496 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:22:05,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:05,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-09-30 00:22:05,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:05,507 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-09-30 00:22:05,524 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:05,527 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-09-30 00:22:05,527 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-09-30 00:22:05,527 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-09-30 00:22:05,527 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-09-30 00:22:05,527 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-09-30 00:22:05,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:05,676 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-09-30 00:22:05,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:05,685 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-09-30 00:22:05,702 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-30 00:22:05,702 [ scc.git] DEBUG Auto-merging setup.py 2025-09-30 00:22:05,703 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:05,706 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-09-30 00:22:05,706 [ scc.git] DEBUG setup.py | 1 + 2025-09-30 00:22:05,706 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-09-30 00:22:06,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:06,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-09-30 00:22:06,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:06,080 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-09-30 00:22:06,098 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-09-30 00:22:06,099 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-09-30 00:22:06,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:06,103 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-09-30 00:22:06,103 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-09-30 00:22:06,103 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-09-30 00:22:06,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:06,466 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-09-30 00:22:06,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:06,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-09-30 00:22:06,491 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:06,495 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-09-30 00:22:06,495 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-30 00:22:06,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:06,852 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-09-30 00:22:06,859 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:06,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-09-30 00:22:06,878 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:06,882 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-09-30 00:22:06,882 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-09-30 00:22:07,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:07,274 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-09-30 00:22:07,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:07,283 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-09-30 00:22:07,300 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:07,305 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-09-30 00:22:07,305 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-09-30 00:22:07,305 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-09-30 00:22:07,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:07,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-09-30 00:22:07,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:07,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-09-30 00:22:07,693 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-09-30 00:22:07,694 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:07,700 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-09-30 00:22:07,700 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-09-30 00:22:07,700 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-09-30 00:22:07,700 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-09-30 00:22:08,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:08,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-09-30 00:22:08,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:08,066 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-09-30 00:22:08,083 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:08,087 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-09-30 00:22:08,087 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-09-30 00:22:08,087 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-09-30 00:22:08,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:08,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...189a10758bce63c40d0fe73d490cc489623a6ceb' 2025-09-30 00:22:08,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:08,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) 189a10758bce63c40d0fe73d490cc489623a6ceb' 2025-09-30 00:22:08,487 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2025-09-30 00:22:08,489 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:08,493 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 2 +- 2025-09-30 00:22:08,493 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 43 +++++++++++++++++++++- 2025-09-30 00:22:08,493 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++----- 2025-09-30 00:22:08,493 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 + 2025-09-30 00:22:08,493 [ scc.git] DEBUG 4 files changed, 66 insertions(+), 12 deletions(-) 2025-09-30 00:22:08,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:08,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-09-30 00:22:08,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:08,865 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-09-30 00:22:08,883 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-30 00:22:08,884 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:08,887 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-09-30 00:22:08,887 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-09-30 00:22:09,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:09,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-09-30 00:22:09,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:09,292 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-09-30 00:22:09,310 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-30 00:22:09,311 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:09,314 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-09-30 00:22:09,314 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-09-30 00:22:09,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:09,683 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7446a144da7db207d65373456bf9347cc0a3dadb' 2025-09-30 00:22:09,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:09,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 635 (Marshal annotations roi shape) 7446a144da7db207d65373456bf9347cc0a3dadb' 2025-09-30 00:22:09,716 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-09-30 00:22:09,717 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-30 00:22:09,722 [ scc.git] DEBUG omeroweb/webclient/tree.py | 6 ++++++ 2025-09-30 00:22:09,722 [ scc.git] DEBUG omeroweb/webclient/views.py | 6 ++++++ 2025-09-30 00:22:09,722 [ scc.git] DEBUG 2 files changed, 12 insertions(+) 2025-09-30 00:22:10,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:10,087 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-30 00:22:10,123 [ scc.git] DEBUG Get sha1 of %s 2025-09-30 00:22:10,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-30 00:22:10,125 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:22:10,160 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:22:10,167 [ scc.git] DEBUG has no local changes 2025-09-30 00:22:10,167 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' - PR 635 will-moore 'Marshal annotations roi shape' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:22:10,175 [ scc.git] DEBUG [detached HEAD 08bfbbec6] merge master -Dorg -Ssuccess-only 2025-09-30 00:22:10,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:22:10,175 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-30 00:22:10,217 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-09-30 00:22:10,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:10,505 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-09-30 00:22:10,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:10,890 [ scc.config] DEBUG Found submodule.omero-py.url 2025-09-30 00:22:11,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:11,277 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-09-30 00:22:11,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:11,671 [ scc.config] DEBUG Found submodule.omero-web.url 2025-09-30 00:22:12,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-30 00:22:12,076 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-30 00:22:12,098 [ scc.git] DEBUG has local changes 2025-09-30 00:22:12,099 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' - PR 635 will-moore 'Marshal annotations roi shape' Generated by OMERO-python-superbuild-push#533 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/533/)' 2025-09-30 00:22:12,105 [ scc.git] DEBUG [detached HEAD abb7540] merge master -Dorg -Ssuccess-only 2025-09-30 00:22:12,105 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-09-30 00:22:12,105 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-09-30 00:22:12,105 [ scc.merge] INFO Already up to date. 2025-09-30 00:22:12,105 [ scc.merge] INFO 2025-09-30 00:22:12,105 [ scc.merge] INFO Merged PRs: 2025-09-30 00:22:12,105 [ scc.merge] INFO - PR 333 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `57934f0`' 2025-09-30 00:22:12,105 [ scc.merge] INFO 2025-09-30 00:22:12,105 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-09-30 00:22:12,105 [ scc.merge] INFO Already up to date. 2025-09-30 00:22:12,105 [ scc.merge] INFO 2025-09-30 00:22:12,105 [ scc.merge] INFO Merged PRs: 2025-09-30 00:22:12,105 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Repository: ome/omero-marshal 2025-09-30 00:22:12,106 [ scc.merge] INFO Excluded PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-09-30 00:22:12,106 [ scc.merge] INFO Already up to date. 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Merged PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Repository: ome/omero-py 2025-09-30 00:22:12,106 [ scc.merge] INFO Excluded PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-09-30 00:22:12,106 [ scc.merge] INFO Already up to date. 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Merged PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 478 chris-allan 'Remove Python 2 compat from gateway utilities and scripts tests' 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Repository: ome/omero-scripts 2025-09-30 00:22:12,106 [ scc.merge] INFO Excluded PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-09-30 00:22:12,106 [ scc.merge] INFO Already up to date. 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Merged PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Repository: ome/omero-web 2025-09-30 00:22:12,106 [ scc.merge] INFO Excluded PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-09-30 00:22:12,106 [ scc.merge] INFO Already up to date. 2025-09-30 00:22:12,106 [ scc.merge] INFO 2025-09-30 00:22:12,106 [ scc.merge] INFO Merged PRs: 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-09-30 00:22:12,106 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-09-30 00:22:12,107 [ scc.merge] INFO - PR 635 will-moore 'Marshal annotations roi shape' 2025-09-30 00:22:12,107 [ scc.merge] INFO 2025-09-30 00:22:12,107 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-30 00:22:12,107 [ scc.git] DEBUG Calling 'git remote' 2025-09-30 00:22:12,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-30 00:22:12,109 [ scc.git] DEBUG Calling 'git remote' 2025-09-30 00:22:12,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:22:12,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-30 00:22:12,111 [ scc.git] DEBUG Calling 'git remote' 2025-09-30 00:22:12,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:22:12,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-30 00:22:12,113 [ scc.git] DEBUG Calling 'git remote' 2025-09-30 00:22:12,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:22:12,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-30 00:22:12,115 [ scc.git] DEBUG Calling 'git remote' 2025-09-30 00:22:12,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-30 00:22:12,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-30 00:22:12,117 [ scc.git] DEBUG Calling 'git remote' 2025-09-30 00:22:12,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 57934f0 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 780876c5 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from b68c3cf nothing to commit, working tree clean 2025-09-30 00:22:40,454 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS