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Started by upstream project "BIOFORMATS-test-repo" build number 19 originally caused by: Started by upstream project "Trigger" build number 22 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11746408554612065817.sh + '[' afi = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_2349_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:53:33,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:53:33,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:53:33,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:53:33,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:53:34,073 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:53:34,075 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:53:34,077 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:53:34,082 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:53:34,083 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 01:53:34,084 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 01:53:34,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 616 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-01 01:53:34,101] [main] java.version = 1.8.0_342 [testng] 01:53:34,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:53:34,108 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:34,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-01_01-53-34.log] [testng] 01:53:34,290 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-01 01:53:34,293] [main] testng.directory = /data [testng] [2024-04-01 01:53:34,293] [main] testng.configDirectory = /config [testng] [2024-04-01 01:53:34,314] [main] testng.multiplier = 1.0 [testng] [2024-04-01 01:53:34,315] [main] testng.in-memory = false [testng] [2024-04-01 01:53:34,315] [main] testng.allow-missing = false [testng] [2024-04-01 01:53:34,315] [main] user.language = fr [testng] [2024-04-01 01:53:34,315] [main] user.country = FR [testng] [2024-04-01 01:53:34,316] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-01 01:53:35,080] [main] ---------------------------------------- [testng] [2024-04-01 01:53:35,080] [main] Total files: 16 [testng] [2024-04-01 01:53:35,081] [main] Scan time: 0.764 s (47 ms/file) [testng] [2024-04-01 01:53:35,081] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 15 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-01 01:53:47,762] [pool-1-thread-1] Initializing /data/samples/5400.afi: [testng] 01:53:47,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:53:47,763 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:47,765 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-01_01-53-47.log] [testng] 01:53:47,766 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ba45448 - End of configuration. [testng] [2024-04-01 01:53:47,912] [pool-1-thread-12] Initializing /data/samples/5351.afi: [testng] 01:53:47,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:53:47,913 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:47,914 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-01_01-53-47.log] [testng] 01:53:47,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47bf407b - End of configuration. [testng] [2024-04-01 01:53:48,208] [pool-1-thread-11] Initializing /data/samples/5306.afi: [testng] 01:53:48,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:53:48,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:48,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-01_01-53-48.log] [testng] 01:53:48,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42b3ecd8 - End of configuration. [testng] [2024-04-01 01:53:48,522] [pool-1-thread-10] Initializing /data/samples/5383.afi: [testng] 01:53:48,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:53:48,524 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:48,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-01_01-53-48.log] [testng] 01:53:48,529 |-INFO in ch.qos.logback.core.sift.SiftProcessor@166742d - End of configuration. [testng] [2024-04-01 01:53:48,730] [pool-1-thread-9] Initializing /data/samples/5365.afi: [testng] 01:53:48,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:53:48,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:48,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-01_01-53-48.log] [testng] 01:53:48,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d6a012e - End of configuration. [testng] [2024-04-01 01:53:49,129] [pool-1-thread-8] Initializing /data/samples/5440.afi: [testng] 01:53:49,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:53:49,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:49,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-01_01-53-49.log] [testng] 01:53:49,198 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70bd4c61 - End of configuration. [testng] [2024-04-01 01:53:49,366] [pool-1-thread-7] Initializing /data/samples/5446.afi: [testng] 01:53:49,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:53:49,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:49,368 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-01_01-53-49.log] [testng] 01:53:49,371 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21a68177 - End of configuration. [testng] [2024-04-01 01:53:49,594] [pool-1-thread-6] Initializing /data/samples/5339.afi: [testng] 01:53:49,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:53:49,595 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:49,597 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-01_01-53-49.log] [testng] 01:53:49,598 |-INFO in ch.qos.logback.core.sift.SiftProcessor@730f87f3 - End of configuration. [testng] [2024-04-01 01:53:50,513] [pool-1-thread-5] Initializing /data/samples/5387.afi: [testng] 01:53:50,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:53:50,514 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:50,515 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-01_01-53-50.log] [testng] 01:53:50,528 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f5a89bb - End of configuration. [testng] [2024-04-01 01:53:50,744] [pool-1-thread-4] Initializing /data/samples/5407.afi: [testng] 01:53:50,744 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:53:50,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:50,745 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-01_01-53-50.log] [testng] 01:53:50,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b90401b - End of configuration. [testng] [2024-04-01 01:53:50,961] [pool-1-thread-3] Initializing /data/samples/5347.afi: [testng] 01:53:50,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:53:50,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:50,963 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-01_01-53-50.log] [testng] 01:53:50,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72dec48c - End of configuration. [testng] [2024-04-01 01:53:51,083] [pool-1-thread-2] Initializing /data/samples/5358.afi: [testng] 01:53:51,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:53:51,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:53:51,084 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-01_01-53-51.log] [testng] 01:53:51,085 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52bfe7a7 - End of configuration. [testng] [2024-04-01 01:54:47,732] [pool-1-thread-1] Initializing /data/samples/5414.afi: [testng] [2024-04-01 01:54:47,841] [pool-1-thread-8] Initializing /data/samples/5343.afi: [testng] [2024-04-01 01:54:53,320] [pool-1-thread-3] Initializing /data/samples/5371.afi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 795, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 0 seconds Finished: SUCCESS