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Started by upstream project "BIOFORMATS-test-repo" build number 236 originally caused by: Started by upstream project "Trigger" build number 261 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins10467459718801336389.sh + '[' zeiss-zvi = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_37174_merge_ci -v /uod/idr/repos/curated/zeiss-zvi:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-zvi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:55:59,375 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:55:59,376 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 03:55:59,376 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:55:59,377 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:55:59,377 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:55:59,377 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:55:59,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:55:59,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:55:59,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:55:59,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:55:59,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:55:59,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:55:59,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:55:59,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:55:59,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:55:59,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:55:59,557 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:55:59,557 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:55:59,557 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:55:59,557 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:55:59,557 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 03:55:59,558 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 03:55:59,558 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 180 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-27 03:55:59,566] [main] java.version = 17.0.2 [testng] 03:55:59,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:55:59,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:55:59,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-27_03-55-59.log] [testng] 03:55:59,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-10-27 03:55:59,610] [main] testng.directory = /data [testng] [2024-10-27 03:55:59,610] [main] testng.configDirectory = /config [testng] [2024-10-27 03:55:59,618] [main] testng.multiplier = 1.0 [testng] [2024-10-27 03:55:59,619] [main] testng.in-memory = false [testng] [2024-10-27 03:55:59,619] [main] testng.allow-missing = false [testng] [2024-10-27 03:55:59,619] [main] user.language = en [testng] [2024-10-27 03:55:59,619] [main] user.country = ${user.country} [testng] [2024-10-27 03:55:59,619] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-27 03:56:17,271] [main] ---------------------------------------- [testng] [2024-10-27 03:56:17,272] [main] Total files: 157 [testng] [2024-10-27 03:56:17,272] [main] Scan time: 17.652 s (112 ms/file) [testng] [2024-10-27 03:56:17,272] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 150 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-27 04:01:15,409] [pool-1-thread-1] Initializing /data/thomas/test_axiocam_3_1.zvi: [testng] 04:01:15,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:01:15,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:15,411 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-27_04-01-15.log] [testng] 04:01:15,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b731b5d - End of configuration. [testng] [2024-10-27 04:01:15,843] [pool-1-thread-12] Initializing /data/dietmar/imagej-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0010.tif: [testng] 04:01:15,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:01:15,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:15,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-27_04-01-15.log] [testng] 04:01:15,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32359781 - End of configuration. [testng] [2024-10-27 04:01:16,800] [pool-1-thread-11] Initializing /data/gaetan/gml16_cenp-fitc_dapi_3.zvi: [testng] 04:01:16,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:01:16,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:16,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-27_04-01-16.log] [testng] 04:01:16,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32f1ac07 - End of configuration. [testng] [2024-10-27 04:01:18,035] [pool-1-thread-10] Initializing /data/markus/6ch-Z-stack_deconvolved.zvi: [testng] 04:01:18,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:01:18,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:18,036 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-27_04-01-18.log] [testng] 04:01:18,037 |-INFO in ch.qos.logback.core.sift.SiftProcessor@269ec002 - End of configuration. [testng] [2024-10-27 04:01:18,648] [pool-1-thread-9] Initializing /data/eirinn/Pharm3-saline2-0147_11.zvi: [testng] 04:01:18,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:01:18,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:18,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-27_04-01-18.log] [testng] 04:01:18,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15039096 - End of configuration. [testng] [2024-10-27 04:01:19,341] [pool-1-thread-8] Initializing /data/eirinn/12_16_2009-01-Tara-HD-Triple-5to15_Position(1)5.zvi: [testng] 04:01:19,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:01:19,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:19,342 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-27_04-01-19.log] [testng] 04:01:19,343 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70b3303a - End of configuration. [testng] [2024-10-27 04:01:20,065] [pool-1-thread-7] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-widefield.zvi: [testng] 04:01:20,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:01:20,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:20,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-27_04-01-20.log] [testng] 04:01:20,066 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c364c41 - End of configuration. [testng] [2024-10-27 04:01:20,656] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_15.zvi: [testng] 04:01:20,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:01:20,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:20,657 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-27_04-01-20.log] [testng] 04:01:20,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fcdf0e0 - End of configuration. [testng] [2024-10-27 04:01:21,929] [pool-1-thread-5] Initializing /data/oli/10 x smc 1.zvi: [testng] 04:01:21,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:01:21,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:21,930 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-27_04-01-21.log] [testng] 04:01:21,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a556a94 - End of configuration. [testng] [2024-10-27 04:01:22,353] [pool-1-thread-4] Initializing /data/markus/MosaiX_irregular_Z-stack_with_autofocus.zvi: [testng] 04:01:22,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:01:22,353 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:22,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-27_04-01-22.log] [testng] 04:01:22,354 |-INFO in ch.qos.logback.core.sift.SiftProcessor@620ad96d - End of configuration. [testng] [2024-10-27 04:01:23,029] [pool-1-thread-3] Initializing /data/eirinn/5_6_2009-DJ9-03_A01_01.zvi: [testng] 04:01:23,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:01:23,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:23,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-27_04-01-23.log] [testng] 04:01:23,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64dd87db - End of configuration. [testng] [2024-10-27 04:01:23,401] [pool-1-thread-2] Initializing /data/joe/test_file_ng_2012.zvi: [testng] 04:01:23,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:01:23,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:23,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-27_04-01-23.log] [testng] 04:01:23,402 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30714281 - End of configuration. [testng] [2024-10-27 04:01:27,695] [pool-1-thread-1] Initializing /data/james/Sylvain_run3_1Gy_Live7-2008-0019.zvi: [testng] [2024-10-27 04:01:28,174] [pool-1-thread-5] Initializing /data/dietmar/DAPI-TexasRed-0015.zvi: [testng] [2024-10-27 04:01:28,719] [pool-1-thread-3] Initializing /data/gaetan/gml16_cenp-fitc_dapi_4.zvi: [testng] [2024-10-27 04:01:29,789] [pool-1-thread-10] Initializing /data/kmichel/20110209_region4_1841_atp.zvi: [testng] [2024-10-27 04:01:30,275] [pool-1-thread-7] Initializing /data/eirinn/11_10_2009-01-LCStim-15-10-09_Position(1).zvi: [testng] [2024-10-27 04:01:30,754] [pool-1-thread-8] Initializing /data/michel/c.zvi: [testng] [2024-10-27 04:01:31,176] [pool-1-thread-12] Initializing /data/karsten/Bild2.zvi: [testng] [2024-10-27 04:01:31,814] [pool-1-thread-9] Initializing /data/georg/Recorder-Stream-0003.zvi: [testng] [2024-10-27 04:01:32,763] [pool-1-thread-11] Initializing /data/converted/damian-compressed.zvi: [testng] [2024-10-27 04:01:34,226] [pool-1-thread-4] Initializing /data/joseph/E-2009-0001a.zvi: [testng] [2024-10-27 04:01:34,849] [pool-1-thread-6] Initializing /data/rolf/example_2-c1+c3.jpg: [testng] [2024-10-27 04:01:35,384] [pool-1-thread-12] Initializing /data/lee/u87.cells-0027_AB02_01.zvi: [testng] [2024-10-27 04:01:35,932] [pool-1-thread-2] Initializing /data/markus/PhaseGFP-MosaiX-Timelapse_Tiles.zvi: [testng] [2024-10-27 04:01:37,531] [pool-1-thread-8] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055.zvi: [testng] [2024-10-27 04:01:38,014] [pool-1-thread-10] Initializing /data/oli/10 x smc 1 neg.zvi: [testng] [2024-10-27 04:01:38,410] [pool-1-thread-1] Initializing /data/markus/Long_TL_CElegans.zvi: [testng] [2024-10-27 04:01:43,831] [pool-1-thread-5] Initializing /data/dietmar/138.zvi: [testng] [2024-10-27 04:01:44,373] [pool-1-thread-7] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast.zvi: [testng] [2024-10-27 04:01:45,183] [pool-1-thread-11] Initializing /data/sebastien/test.zvi: [testng] [2024-10-27 04:01:46,139] [pool-1-thread-9] Initializing /data/gaetan/gml16_cenp-fitc_dapi_9.zvi: [testng] [2024-10-27 04:01:49,114] [pool-1-thread-6] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c2.TIF: [testng] [2024-10-27 04:01:51,290] [pool-1-thread-4] Initializing /data/markus/Brain_high_dynamic_range_imaging_Z-stack.zvi: [testng] [2024-10-27 04:01:52,124] [pool-1-thread-10] Initializing /data/georg/TinCD4 x Gcamp3-2x adult CyD-80uM+blebb-10uM-0001.zvi: [testng] [2024-10-27 04:01:57,637] [pool-1-thread-3] Initializing /data/qa-7332/ARF1_M90T_01-0002_Position(46).zvi: [testng] [2024-10-27 04:01:58,500] [pool-1-thread-8] Initializing /data/rolf/example_2-2010_11_25.zvi: [testng] [2024-10-27 04:01:59,024] [pool-1-thread-7] Initializing /data/michel/e.zvi: [testng] [2024-10-27 04:01:59,457] [pool-1-thread-5] Initializing /data/ville/MultiCh-RGB/pollen_bw.zvi: [testng] [2024-10-27 04:01:59,881] [pool-1-thread-11] Initializing /data/qa-21711/test.zvi: [testng] [2024-10-27 04:02:03,803] [pool-1-thread-12] Initializing /data/pki/E-07.zvi: [testng] [2024-10-27 04:02:09,039] [pool-1-thread-7] Initializing /data/rachel/40K 30s A1.zvi: [testng] [2024-10-27 04:02:09,635] [pool-1-thread-5] Initializing /data/chris/file01.zvi: [testng] [2024-10-27 04:02:10,652] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_25.zvi: [testng] [2024-10-27 04:02:12,226] [pool-1-thread-9] Initializing /data/jonas/10_0907_multidrug-0001_AB01_03.zvi: [testng] [2024-10-27 04:02:13,930] [pool-1-thread-4] Initializing /data/dietmar/137.zvi: [testng] [2024-10-27 04:02:14,482] [pool-1-thread-3] Initializing /data/gaetan/gml16_cenp-fitc_dapi_22.zvi: [testng] [2024-10-27 04:02:15,843] [pool-1-thread-8] Initializing /data/darren/section0002_w1.zvi: [testng] [2024-10-27 04:02:16,401] [pool-1-thread-2] Initializing /data/rolf/example_2-c3.jpg: [testng] [2024-10-27 04:02:20,149] [pool-1-thread-5] Initializing /data/lior/live+cf2b.zvi: [testng] [2024-10-27 04:02:20,623] [pool-1-thread-2] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c3.TIF: [testng] [2024-10-27 04:02:21,924] [pool-1-thread-7] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-ten.zvi: [testng] [2024-10-27 04:02:22,493] [pool-1-thread-4] Initializing /data/joseph/E-2009_0022.zvi: [testng] [2024-10-27 04:02:25,980] [pool-1-thread-8] Initializing /data/dan/Zstack_convalaria.zvi: [testng] [2024-10-27 04:02:27,133] [pool-1-thread-7] Initializing /data/kelsey/432x342BW.zvi: [testng] [2024-10-27 04:02:27,573] [pool-1-thread-5] Initializing /data/vladan/vladan.zvi: [testng] [2024-10-27 04:02:28,629] [pool-1-thread-4] Initializing /data/karsten/Bild1.zvi: [testng] [2024-10-27 04:02:29,825] [pool-1-thread-3] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_(c1+c2+c3+c4).TIF: [testng] [2024-10-27 04:02:30,876] [pool-1-thread-6] Initializing /data/oli/10 x smc 3.zvi: [testng] [2024-10-27 04:02:31,321] [pool-1-thread-9] Initializing /data/michel/a.zvi: [testng] [2024-10-27 04:02:31,720] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_23.zvi: [testng] [2024-10-27 04:02:33,269] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_5.zvi: [testng] [2024-10-27 04:02:34,371] [pool-1-thread-7] Initializing /data/markus/30channels_exposure-series.zvi: [testng] [2024-10-27 04:02:36,453] [pool-1-thread-8] Initializing /data/rachel/40K 30s A2.zvi: [testng] [2024-10-27 04:02:37,023] [pool-1-thread-4] Initializing /data/markus/Smart_Experiment_4ch-T-time-stitched.zvi: [testng] [2024-10-27 04:02:38,511] [pool-1-thread-11] Initializing /data/michel/b.zvi: [testng] [2024-10-27 04:02:39,005] [pool-1-thread-9] Initializing /data/markus/Material_color_image_HRc_microscanned_4x3K.zvi: [testng] [2024-10-27 04:02:40,039] [pool-1-thread-7] Initializing /data/markus/Mouse-newborn-panorama_lossless_compressed.zvi: [testng] [2024-10-27 04:02:40,707] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_16.zvi: [testng] [2024-10-27 04:02:42,718] [pool-1-thread-10] Initializing /data/gaetan/gml16_cenp-fitc_dapi_1.zvi: [testng] [2024-10-27 04:02:44,002] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_11.zvi: [testng] [2024-10-27 04:02:45,294] [pool-1-thread-3] Initializing /data/rolf/example_2.png: [testng] [2024-10-27 04:02:45,934] [pool-1-thread-8] Initializing /data/markus/Mouse-newborn-panorama.zvi: [testng] [2024-10-27 04:02:46,697] [pool-1-thread-11] Initializing /data/susan/BY4741NQ2.zvi: [testng] [2024-10-27 04:02:47,173] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_24.zvi: [testng] [2024-10-27 04:02:48,498] [pool-1-thread-12] Initializing /data/christophe/Exemple_Zeiss_ROI.zvi: [testng] [2024-10-27 04:02:48,968] [pool-1-thread-5] Initializing /data/gaetan/gml16_cenp-fitc_dapi_8.zvi: [testng] [2024-10-27 04:02:50,362] [pool-1-thread-4] Initializing /data/ville/MultiCh-RGB/pollen_rgb.zvi: [testng] [2024-10-27 04:02:51,941] [pool-1-thread-3] Initializing /data/othmar/mozaic.zvi: [testng] [2024-10-27 04:02:53,428] [pool-1-thread-12] Initializing /data/converted/mri-stack.zvi: [testng] [2024-10-27 04:02:55,173] [pool-1-thread-11] Initializing /data/gaetan/gml16_cenp-fitc_dapi_12.zvi: [testng] [2024-10-27 04:02:56,451] [pool-1-thread-9] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.zvi: [testng] [2024-10-27 04:02:56,964] [pool-1-thread-6] Initializing /data/eirinn/Demo-tile.zvi: [testng] [2024-10-27 04:02:57,353] [pool-1-thread-4] Initializing /data/kelsey/1300x1030BW.zvi: [testng] [2024-10-27 04:02:57,749] [pool-1-thread-10] Initializing /data/oli/10 x smc 4.zvi: [testng] [2024-10-27 04:02:58,182] [pool-1-thread-1] Initializing /data/markus/HighSpeedParas.zvi: [testng] [2024-10-27 04:03:02,524] [pool-1-thread-12] Initializing /data/monica/Monica_elegans_movie.zvi: [testng] [2024-10-27 04:03:03,662] [pool-1-thread-5] Initializing /data/converted/2ChZ.zvi: [testng] [2024-10-27 04:03:04,212] [pool-1-thread-7] Initializing /data/miso/Aufnahme-184058-0002.zvi: [testng] [2024-10-27 04:03:04,671] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_10.zvi: [testng] [2024-10-27 04:03:07,691] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_14.zvi: [testng] [2024-10-27 04:03:09,020] [pool-1-thread-5] Initializing /data/joseph/BEST_EXAMPLE_should_look_like.jpg: [testng] [2024-10-27 04:03:09,150] [pool-1-thread-8] Initializing /data/othmar/z-stack.zvi: [testng] [2024-10-27 04:03:11,815] [pool-1-thread-10] Initializing /data/karsten/247096n3s3s9.zvi: [testng] [2024-10-27 04:03:12,384] [pool-1-thread-4] Initializing /data/dietmar/bio-formats-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.tif: [testng] [2024-10-27 04:03:13,355] [pool-1-thread-9] Initializing /data/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.zvi: [testng] [2024-10-27 04:03:14,354] [pool-1-thread-7] Initializing /data/markus/PC12_neuroblastoma_Fura2_exp#9.zvi: [testng] [2024-10-27 04:03:15,795] [pool-1-thread-12] Initializing /data/kelsey/650x514BW.zvi: [testng] [2024-10-27 04:03:17,444] [pool-1-thread-5] Initializing /data/nicolas/image.zvi: [testng] [2024-10-27 04:03:17,910] [pool-1-thread-11] Initializing /data/joseph/E-2009-0004.zvi: [testng] [2024-10-27 04:03:18,848] [pool-1-thread-9] Initializing /data/markus/Hypocampus_Tiles_with_stiching.zvi: [testng] [2024-10-27 04:03:19,474] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_17.zvi: [testng] [2024-10-27 04:03:20,770] [pool-1-thread-3] Initializing /data/david/SNAP-181518-0001.zvi: [testng] [2024-10-27 04:03:21,430] [pool-1-thread-10] Initializing /data/dietmar/hMADS-24h-BAC1-7-AF647-AF488-RHO-1day-hyb-CSK-2007-06-29-0008_Position(113).zvi: [testng] [2024-10-27 04:03:22,055] [pool-1-thread-4] Initializing /data/jan/SampleStack_Mosaic4x5_comb.zvi: [testng] [2024-10-27 04:03:23,542] [pool-1-thread-12] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-six.zvi: [testng] [2024-10-27 04:03:24,030] [pool-1-thread-6] Initializing /data/qa-7332/qa-7332_expected_rendering_ARF1_M90T_01-0002_Position(46)_Gallery.tif: [testng] [2024-10-27 04:03:26,274] [pool-1-thread-5] Initializing /data/eirinn/Correctly-tiled.JPG: [testng] [2024-10-27 04:03:26,845] [pool-1-thread-11] Initializing /data/gaetan/gml16_cenp-fitc_dapi_19.zvi: [testng] [2024-10-27 04:03:28,244] [pool-1-thread-7] Initializing /data/dietmar/bio-formats-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0010.tif: [testng] [2024-10-27 04:03:30,107] [pool-1-thread-5] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c4.TIF: [testng] [2024-10-27 04:03:31,124] [pool-1-thread-12] Initializing /data/rolf/example_2-c1.jpg: [testng] [2024-10-27 04:03:31,663] [pool-1-thread-10] Initializing /data/strand/2Colors1Plane.zvi: [testng] [2024-10-27 04:03:33,452] [pool-1-thread-6] Initializing /data/nicolas/image.tif: [testng] [2024-10-27 04:03:34,632] [pool-1-thread-1] Initializing /data/shalin/ibidiuslide1-timelapse3_mid2.zvi: [testng] [2024-10-27 04:03:35,251] [pool-1-thread-3] Initializing /data/oli/10 x smc 2 neg.zvi: [testng] [2024-10-27 04:03:35,753] [pool-1-thread-9] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c1.TIF: [testng] [2024-10-27 04:03:36,656] [pool-1-thread-2] Initializing /data/darren/section0001_w1.zvi: [testng] [2024-10-27 04:03:37,294] [pool-1-thread-12] Initializing /data/eirinn/12_2_2009-16-Hes5-BrdU-Proper_Position(52).zvi: [testng] [2024-10-27 04:03:37,891] [pool-1-thread-8] Initializing /data/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.zvi: [testng] [2024-10-27 04:03:38,261] [pool-1-thread-7] Initializing /data/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.zvi: [testng] [2024-10-27 04:03:40,809] [pool-1-thread-4] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-sectioned.zvi: [testng] [2024-10-27 04:03:41,929] [pool-1-thread-11] Initializing /data/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.zvi: [testng] [2024-10-27 04:03:43,406] [pool-1-thread-10] Initializing /data/pradeep/MCF10A_Scratch-0003_CatGDsiNeg.zvi: [testng] [2024-10-27 04:03:43,863] [pool-1-thread-5] Initializing /data/lior/live+cf5b.zvi: [testng] [2024-10-27 04:03:44,296] [pool-1-thread-8] Initializing /data/sebastien/F1.zvi: [testng] [2024-10-27 04:03:44,947] [pool-1-thread-1] Initializing /data/dan/adultNr1.zvi: [testng] [2024-10-27 04:03:45,470] [pool-1-thread-3] Initializing /data/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.zvi: [testng] [2024-10-27 04:03:46,117] [pool-1-thread-6] Initializing /data/converted/WTZER_Series76_z003_ch00.zvi: [testng] [2024-10-27 04:03:46,556] [pool-1-thread-12] Initializing /data/rolf/example_1-2010_11_25.zvi: [testng] [2024-10-27 04:03:47,887] [pool-1-thread-9] Initializing /data/sam/ADDLs3-48hrsMouse-Vib50-Biotyn-IHC-s1c2r2-5x-001-07.zvi: [testng] [2024-10-27 04:03:48,676] [pool-1-thread-4] Initializing /data/jeffrey/750-30-03.zvi: [testng] [2024-10-27 04:03:49,066] [pool-1-thread-7] Initializing /data/michel/d.zvi: [testng] [2024-10-27 04:03:49,432] [pool-1-thread-2] Initializing /data/dietmar/imagej-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.tif: [testng] [2024-10-27 04:03:51,388] [pool-1-thread-10] Initializing /data/markus/Branchiostoma_6x12_MosaiX_Tiles_color.zvi: [testng] [2024-10-27 04:03:53,333] [pool-1-thread-5] Initializing /data/converted/WTZER_Series76_z003_ch00-with-ROIs.TIF: [testng] [2024-10-27 04:03:54,277] [pool-1-thread-8] Initializing /data/converted/deconvolve6_Pseudo_Tl000_Zs000.zvi: [testng] [2024-10-27 04:03:54,720] [pool-1-thread-6] Initializing /data/oli/10 x smc 2.zvi: [testng] [2024-10-27 04:03:55,129] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_18.zvi: [testng] [2024-10-27 04:03:56,413] [pool-1-thread-7] Initializing /data/gaetan/gml16_cenp-fitc_dapi_2.zvi: [testng] [2024-10-27 04:03:57,545] [pool-1-thread-11] Initializing /data/converted/2chZT.zvi: [testng] [2024-10-27 04:03:59,402] [pool-1-thread-4] Initializing /data/gaetan/gml16_cenp-fitc_dapi_6.zvi: [testng] [2024-10-27 04:04:01,714] [pool-1-thread-3] Initializing /data/gaetan/gml16_cenp-fitc_dapi_21.zvi: [testng] [2024-10-27 04:04:02,931] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_13.zvi: [testng] [2024-10-27 04:04:04,167] [pool-1-thread-1] Initializing /data/converted/WTZER_Series76_z003_ch00-with-ROIs.zvi: [testng] [2024-10-27 04:04:04,534] [pool-1-thread-6] Initializing /data/jonas/10_0907_multidrug-0001_AB01_08.zvi: [testng] [2024-10-27 04:04:06,139] [pool-1-thread-8] Initializing /data/kmichel/20110209_region1_1505_atp.zvi: [testng] [2024-10-27 04:04:06,579] [pool-1-thread-5] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.zvi: [testng] [2024-10-27 04:04:07,343] [pool-1-thread-11] Initializing /data/rolf/example_2.tif: [testng] [2024-10-27 04:04:10,641] [pool-1-thread-9] Initializing /data/converted/damian.zvi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7950, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 minutes 12 seconds Finished: SUCCESS