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Started by upstream project "BIOFORMATS-test-repo" build number 281
originally caused by:
 Started by upstream project "Trigger" build number 301
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins2390657439868558194.sh
+ '[' afi = slidebook ']'
++ date +%u
+ '[' 5 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_44354_merge_ci -v /uod/idr/repos/curated/afi:/data -v /uod/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:49:03,738 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:49:03,740 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service.
   [testng] 01:49:03,740 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:49:03,741 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:49:03,742 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:49:03,742 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:49:03,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:49:03,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:49:03,743 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:49:03,743 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:49:03,743 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:49:03,743 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:49:03,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:49:03,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:49:04,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:49:04,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:49:04,040 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:49:04,040 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:49:04,041 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:49:04,041 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:49:04,041 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration.
   [testng] 01:49:04,042 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point
   [testng] 01:49:04,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 299 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-12-06 01:49:04,054] [main] java.version = 1.8.0_342
   [testng] 01:49:04,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:49:04,059 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:04,109 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-06_01-49-04.log]
   [testng] 01:49:04,111 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration.
   [testng] [2024-12-06 01:49:04,114] [main] testng.directory = /data
   [testng] [2024-12-06 01:49:04,114] [main] testng.configDirectory = /config
   [testng] [2024-12-06 01:49:04,127] [main] testng.multiplier = 1.0
   [testng] [2024-12-06 01:49:04,127] [main] testng.in-memory = false
   [testng] [2024-12-06 01:49:04,127] [main] testng.allow-missing = false
   [testng] [2024-12-06 01:49:04,128] [main] user.language = en
   [testng] [2024-12-06 01:49:04,128] [main] user.country = ${user.country}
   [testng] [2024-12-06 01:49:04,128] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-12-06 01:49:08,896] [main] ----------------------------------------
   [testng] [2024-12-06 01:49:08,897] [main] Total files: 16
   [testng] [2024-12-06 01:49:08,897] [main] Scan time: 4.768 s (298 ms/file)
   [testng] [2024-12-06 01:49:08,897] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 15 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-12-06 01:49:30,804] [pool-1-thread-1] Initializing /data/samples/5351.afi: 
   [testng] 01:49:30,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:49:30,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:30,805 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-06_01-49-30.log]
   [testng] 01:49:30,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26901d1 - End of configuration.
   [testng] [2024-12-06 01:49:31,364] [pool-1-thread-12] Initializing /data/samples/5440.afi: 
   [testng] 01:49:31,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:49:31,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:31,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-06_01-49-31.log]
   [testng] 01:49:31,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@284a4f24 - End of configuration.
   [testng] [2024-12-06 01:49:31,904] [pool-1-thread-11] Initializing /data/samples/5407.afi: 
   [testng] 01:49:31,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:49:31,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:31,905 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-06_01-49-31.log]
   [testng] 01:49:31,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c732bb2 - End of configuration.
   [testng] [2024-12-06 01:49:33,213] [pool-1-thread-10] Initializing /data/samples/5365.afi: 
   [testng] 01:49:33,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:49:33,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:33,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-06_01-49-33.log]
   [testng] 01:49:33,215 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64930170 - End of configuration.
   [testng] [2024-12-06 01:49:33,852] [pool-1-thread-9] Initializing /data/samples/5339.afi: 
   [testng] 01:49:33,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:49:33,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:33,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-06_01-49-33.log]
   [testng] 01:49:33,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1503ea31 - End of configuration.
   [testng] [2024-12-06 01:49:34,630] [pool-1-thread-8] Initializing /data/samples/5343.afi: 
   [testng] 01:49:34,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:49:34,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:34,631 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-06_01-49-34.log]
   [testng] 01:49:34,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17d04e8a - End of configuration.
   [testng] [2024-12-06 01:49:35,712] [pool-1-thread-7] Initializing /data/samples/5347.afi: 
   [testng] 01:49:35,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:49:35,712 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:35,713 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-06_01-49-35.log]
   [testng] 01:49:35,713 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cbd8e8 - End of configuration.
   [testng] [2024-12-06 01:49:36,800] [pool-1-thread-6] Initializing /data/samples/5383.afi: 
   [testng] 01:49:36,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:49:36,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:36,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-06_01-49-36.log]
   [testng] 01:49:36,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e2fe89d - End of configuration.
   [testng] [2024-12-06 01:49:37,678] [pool-1-thread-5] Initializing /data/samples/5400.afi: 
   [testng] 01:49:37,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:49:37,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:37,679 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-06_01-49-37.log]
   [testng] 01:49:37,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@166742d - End of configuration.
   [testng] [2024-12-06 01:49:38,386] [pool-1-thread-4] Initializing /data/samples/5371.afi: 
   [testng] 01:49:38,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:49:38,387 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:38,387 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-06_01-49-38.log]
   [testng] 01:49:38,388 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d6a012e - End of configuration.
   [testng] [2024-12-06 01:49:39,174] [pool-1-thread-3] Initializing /data/samples/5446.afi: 
   [testng] 01:49:39,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:49:39,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:39,174 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-06_01-49-39.log]
   [testng] 01:49:39,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57166082 - End of configuration.
   [testng] [2024-12-06 01:49:39,922] [pool-1-thread-2] Initializing /data/samples/5306.afi: 
   [testng] 01:49:39,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:49:39,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:49:39,923 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-06_01-49-39.log]
   [testng] 01:49:39,924 |-INFO in ch.qos.logback.core.sift.SiftProcessor@552aec55 - End of configuration.
   [testng] [2024-12-06 01:50:31,711] [pool-1-thread-3] Initializing /data/samples/5387.afi: 
   [testng] [2024-12-06 01:50:32,938] [pool-1-thread-5] Initializing /data/samples/5358.afi: 
   [testng] [2024-12-06 01:50:35,470] [pool-1-thread-12] Initializing /data/samples/5414.afi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 795, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 2 minutes 21 seconds
Finished: SUCCESS