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Started by upstream project "BIOFORMATS-test-repo" build number 375 originally caused by: Started by upstream project "Trigger" build number 398 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins9339547400133175709.sh + '[' ome-tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_59359_merge_ci -v /uod/idr/repos/curated/ome-tiff:/data -v /uod/idr-scratch/merge-ci/curated/ome-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:10:26,488 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 01:10:26,489 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 01:10:26,489 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:10:26,490 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:10:26,490 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:10:26,491 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:10:26,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:10:26,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:10:26,491 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:10:26,492 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:10:26,492 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:10:26,492 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:10:26,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:10:26,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:10:26,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:10:26,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:10:26,706 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:10:26,706 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:10:26,706 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:10:26,706 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:10:26,706 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 01:10:26,707 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 01:10:26,707 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 216 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-12 01:10:26,716] [main] java.version = 17.0.2 [testng] 01:10:26,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:10:26,720 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:10:26,761 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-12_01-10-26.log] [testng] 01:10:26,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-12 01:10:26,765] [main] testng.directory = /data [testng] [2025-03-12 01:10:26,765] [main] testng.configDirectory = /config [testng] [2025-03-12 01:10:26,774] [main] testng.multiplier = 1.0 [testng] [2025-03-12 01:10:26,775] [main] testng.in-memory = false [testng] [2025-03-12 01:10:26,775] [main] testng.allow-missing = false [testng] [2025-03-12 01:10:26,775] [main] user.language = en [testng] [2025-03-12 01:10:26,775] [main] user.country = ${user.country} [testng] [2025-03-12 01:10:26,775] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-12 01:20:47,143] [main] ---------------------------------------- [testng] [2025-03-12 01:20:47,143] [main] Total files: 4771 [testng] [2025-03-12 01:20:47,144] [main] Scan time: 620.368 s (130 ms/file) [testng] [2025-03-12 01:20:47,144] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 1455 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-12 02:24:05,116] [pool-1-thread-1] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y00/image--L15--S00--U00--V00--J00--X00--Y00--T15--Z00--C00.ome.tif: [testng] 02:24:05,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:24:05,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:05,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-12_02-24-05.log] [testng] 02:24:05,119 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75826f97 - End of configuration. [testng] [2025-03-12 02:24:06,701] [pool-1-thread-12] Initializing /data/prairie/ZSeries-12062007-1400-096/ZSeries-12062007-1400-096.xml: [testng] 02:24:06,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:24:06,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:06,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-12_02-24-06.log] [testng] 02:24:06,703 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7731ba70 - End of configuration. [testng] [2025-03-12 02:24:09,016] [pool-1-thread-11] Initializing /data/andor/iQMM_FURA_TIME183_WAVELENGTH0_0.ome.tif: [testng] 02:24:09,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:24:09,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:09,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-12_02-24-09.log] [testng] 02:24:09,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f81a150 - End of configuration. [testng] [2025-03-12 02:24:10,820] [pool-1-thread-10] Initializing /data/andor/iQMM_FURA_TIME108_WAVELENGTH0_0.ome.tif: [testng] 02:24:10,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:24:10,820 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:10,820 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-12_02-24-10.log] [testng] 02:24:10,821 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d0fc102 - End of configuration. [testng] [2025-03-12 02:24:12,085] [pool-1-thread-9] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y02/image--L03--S00--U00--V00--J00--X04--Y02--T03--Z00--C00.ome.tif: [testng] 02:24:12,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:24:12,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:12,086 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-12_02-24-12.log] [testng] 02:24:12,086 |-INFO in ch.qos.logback.core.sift.SiftProcessor@777419e0 - End of configuration. [testng] [2025-03-12 02:24:13,541] [pool-1-thread-8] Initializing /data/christian/lsfm_110404_005_x00_y00_ch00.tif: [testng] 02:24:13,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:24:13,541 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:13,542 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-12_02-24-13.log] [testng] 02:24:13,542 |-INFO in ch.qos.logback.core.sift.SiftProcessor@113da36d - End of configuration. [testng] [2025-03-12 02:24:14,902] [pool-1-thread-7] Initializing /data/public/2008-09/multi-channel-time-series.ome.tiff: [testng] 02:24:14,902 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:24:14,903 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:14,903 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-12_02-24-14.log] [testng] 02:24:14,904 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2324d41a - End of configuration. [testng] [2025-03-12 02:24:16,023] [pool-1-thread-6] Initializing /data/oliver/LA_ProtocolCombination_12.10.2009_21_40_58_Marker_1__3 3.tif: [testng] 02:24:16,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:24:16,023 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:16,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-12_02-24-16.log] [testng] 02:24:16,024 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fd25098 - End of configuration. [testng] [2025-03-12 02:24:21,732] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X01--Y03/image--L04--S00--U00--V00--J00--X01--Y03--T04--Z00--C00.ome.tif: [testng] 02:24:21,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:24:21,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:21,733 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-12_02-24-21.log] [testng] 02:24:21,733 |-INFO in ch.qos.logback.core.sift.SiftProcessor@130c0ce0 - End of configuration. [testng] [2025-03-12 02:24:22,990] [pool-1-thread-4] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y00/image--L11--S00--U00--V00--J00--X05--Y00--T11--Z00--C00.ome.tif: [testng] 02:24:22,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:24:22,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:22,992 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-12_02-24-22.log] [testng] 02:24:22,993 |-INFO in ch.qos.logback.core.sift.SiftProcessor@417c6d59 - End of configuration. [testng] [2025-03-12 02:24:24,295] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y00/image--L02--S00--U00--V00--J00--X03--Y00--T02--Z00--C00.ome.tif: [testng] 02:24:24,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:24:24,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:24,295 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-12_02-24-24.log] [testng] 02:24:24,296 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45b58e97 - End of configuration. [testng] [2025-03-12 02:24:25,684] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y00/image--L09--S00--U00--V00--J00--X03--Y00--T09--Z00--C00.ome.tif: [testng] 02:24:25,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:24:25,684 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:24:25,685 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-12_02-24-25.log] [testng] 02:24:25,685 |-INFO in ch.qos.logback.core.sift.SiftProcessor@752c2e24 - End of configuration. [testng] [2025-03-12 02:24:38,388] [pool-1-thread-7] Initializing /data/andor/iQMM_FURA_TIME73_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:24:46,191] [pool-1-thread-4] Initializing /data/andor/iQMM_FURA_TIME195_WAVELENGTH0_0.ome.tif: [testng] [2025-03-12 02:24:48,281] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y05/image--L04--S00--U00--V00--J00--X06--Y05--T04--Z00--C00.ome.tif: [testng] [2025-03-12 02:24:50,111] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y04/image--L09--S00--U00--V00--J00--X06--Y04--T09--Z00--C00.ome.tif: [testng] [2025-03-12 02:24:52,139] [pool-1-thread-3] Initializing /data/andor/iQMM_FURA_TIME160_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:24:54,183] [pool-1-thread-1] Initializing /data/volocity/FromVolocity-2007-10-05.ome.tif: [testng] [2025-03-12 02:24:57,510] [pool-1-thread-9] Initializing /data/public/2012-06/modulo/SPIM-ModuloAlongZ.ome.tiff: [testng] [2025-03-12 02:24:59,771] [pool-1-thread-8] Initializing /data/andor/iQMM_FURA_TIME154_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:25:02,085] [pool-1-thread-11] Initializing /data/andor/iQMM_FURA_TIME10_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:25:03,928] [pool-1-thread-10] Initializing /data/ruben/experiment--2009_10_27_15_43_34/slide--S00/chamber--U00--V00/field--X04--Y00/image--L00--S00--U00--V00--J00--X04--Y00--T00--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:19,405] [pool-1-thread-9] Initializing /data/andor/iQMM_FURA_TIME188_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:25:26,800] [pool-1-thread-1] Initializing /data/andor/iQMM_FURA_TIME187_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:25:29,130] [pool-1-thread-7] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y03/image--L09--S00--U00--V00--J00--X03--Y03--T09--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:31,565] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X00--Y02/image--L08--S00--U00--V00--J00--X00--Y02--T08--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:33,718] [pool-1-thread-10] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y00/image--L06--S00--U00--V00--J00--X03--Y00--T06--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:35,888] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X05--Y05/image--L02--S00--U00--V00--J00--X05--Y05--T02--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:38,633] [pool-1-thread-8] Initializing /data/andor/iQMM_FURA_TIME18_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:25:41,144] [pool-1-thread-6] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y00/image--L01--S00--U00--V00--J00--X03--Y00--T01--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:43,334] [pool-1-thread-11] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y03/image--L06--S00--U00--V00--J00--X03--Y03--T06--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:45,235] [pool-1-thread-3] Initializing /data/public/2008-09/multi-channel.ome.tiff: [testng] [2025-03-12 02:25:46,656] [pool-1-thread-4] Initializing /data/andor/iQMM_FURA_TIME26_WAVELENGTH0_0.ome.tif: [testng] [2025-03-12 02:25:56,546] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y00/image--L10--S00--U00--V00--J00--X02--Y00--T10--Z00--C00.ome.tif: [testng] [2025-03-12 02:25:58,055] [pool-1-thread-9] Initializing /data/andor/iQMM_FURA_TIME186_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 02:25:59,565] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y03/image--L00--S00--U00--V00--J00--X04--Y03--T00--Z00--C00.ome.tif: [testng] 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Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y04/image--L10--S00--U00--V00--J00--X04--Y04--T10--Z00--C00.ome.tif: [testng] [2025-03-12 03:21:03,495] [pool-1-thread-11] Initializing /data/tubhiswtTEST/tubhiswt4D-J2K-LOSSY.ome.tif: [testng] [2025-03-12 03:21:08,213] [pool-1-thread-2] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X04--Y02/image--L01--S00--U00--V00--J00--X04--Y02--T01--Z00--C00.ome.tif: [testng] [2025-03-12 03:21:13,152] [pool-1-thread-3] Initializing /data/glen/OMETiff Slidebook donotopen/Capture 2 - Position 1_XY1306537975_Z00_T002_C0.tiff: [testng] [2025-03-12 03:21:18,065] [pool-1-thread-5] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X02--Y00/image--L04--S00--U00--V00--J00--X02--Y00--T04--Z00--C00.ome.tif: [testng] [2025-03-12 03:21:19,379] [pool-1-thread-1] Initializing /data/andor/iQMM_FURA_TIME92_WAVELENGTH1_0.ome.tif: 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/data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X06--Y05/image--L12--S00--U00--V00--J00--X06--Y05--T12--Z00--C00.ome.tif: [testng] [2025-03-12 03:58:12,656] [pool-1-thread-5] Initializing /data/andor/iQMM_FURA_TIME131_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 03:58:23,096] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_59_00/slide--S00/chamber--U00--V00/field--X03--Y03/image--L05--S00--U00--V00--J00--X03--Y03--T05--Z00--C00.ome.tif: [testng] [2025-03-12 03:58:28,173] [pool-1-thread-2] Initializing /data/andor/iQMM_FURA_TIME180_WAVELENGTH1_0.ome.tif: [testng] [2025-03-12 03:58:36,793] [pool-1-thread-9] Initializing /data/andor/iQMM_FURA_TIME105_WAVELENGTH0_0.ome.tif: [testng] [2025-03-12 03:58:39,833] [pool-1-thread-1] Initializing /data/heinrich/3150248 Ex590.ome.tif: [testng] [2025-03-12 03:58:45,657] [pool-1-thread-5] Initializing /data/chris/Fig5/Fig 5A.ome.tiff: [testng] [2025-03-12 03:58:51,059] [pool-1-thread-3] Initializing /data/ruben/experiment--2009_10_27_15_43_34/slide--S00/chamber--U00--V00/field--X02--Y01/image--L00--S00--U00--V00--J00--X02--Y01--T00--Z00--C00.ome.tif: [testng] [2025-03-12 03:59:00,425] [pool-1-thread-5] Initializing /data/bk/img_bk_20110701.ome.tif: [testng] [2025-03-12 03:59:05,865] [pool-1-thread-2] Initializing /data/public/2010-04/ROI.ome.tiff: [testng] 05:41:04,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 05:41:04,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:41:04,530 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-12_05-41-04.log] [testng] 05:41:04,531 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a637052 - End of configuration. [testng] 06:43:02,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:43:02,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:43:02,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-12_06-43-02.log] [testng] 06:43:02,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6778c6bb - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 77115, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 332 minutes 45 seconds Finished: SUCCESS