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+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-02 01:01:07,813 [  scc.config] DEBUG Found github.token
2024-05-02 01:01:07,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-02 01:01:08,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:08,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:08,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-02 01:01:08,885 [      scc.gh] DEBUG 4641 remaining from 5000 (Reset at 01:05
2024-05-02 01:01:08,886 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-02 01:01:08,890 [     scc.git] DEBUG Check current status
2024-05-02 01:01:08,890 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-02 01:01:08,894 [     scc.git] DEBUG 558b56cf6 Merge pull request #422 from jburel/issue_421
2024-05-02 01:01:08,894 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-02 01:01:08,933 [  scc.config] DEBUG Found remote.origin.url
2024-05-02 01:01:09,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-05-02 01:01:09,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-02 01:01:10,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-02 01:01:10,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-02 01:01:11,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-02 01:01:11,116 [     scc.git] DEBUG Resetting...
2024-05-02 01:01:11,116 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-02 01:01:11,134 [     scc.git] DEBUG HEAD is now at 558b56cf6 Merge pull request #422 from jburel/issue_421
2024-05-02 01:01:11,135 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-02 01:01:11,178 [     scc.git] DEBUG Check current status
2024-05-02 01:01:11,178 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-02 01:01:11,183 [     scc.git] DEBUG 558b56cf6 Merge pull request #422 from jburel/issue_421
2024-05-02 01:01:11,184 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-02 01:01:11,225 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-05-02 01:01:11,225 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-05-02 01:01:11,225 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-05-02 01:01:11,225 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-05-02 01:01:11,225 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-05-02 01:01:11,225 [    scc.repo] DEBUG ## PRs found:
2024-05-02 01:01:11,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-05-02 01:01:12,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-05-02 01:01:12,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-05-02 01:01:13,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-05-02 01:01:13,155 [    scc.repo] DEBUG   - PR 436 dominikl 'Update apache common libs'
2024-05-02 01:01:13,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/427 HTTP/1.1" 200 None
2024-05-02 01:01:13,619 [    scc.repo] DEBUG   - PR 427 dominikl 'Handle out of space'
2024-05-02 01:01:14,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416 HTTP/1.1" 200 None
2024-05-02 01:01:14,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416/comments HTTP/1.1" 200 None
2024-05-02 01:01:14,616 [    scc.repo] DEBUG   - PR 416 jburel 'Prep 5.8.4'
2024-05-02 01:01:15,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-05-02 01:01:15,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-05-02 01:01:15,561 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-02 01:01:16,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-05-02 01:01:16,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-05-02 01:01:16,541 [    scc.repo] DEBUG   - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-02 01:01:17,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-05-02 01:01:17,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-05-02 01:01:17,510 [    scc.repo] DEBUG ## Branches found:
2024-05-02 01:01:17,510 [     scc.git] DEBUG Get sha1 of %s
2024-05-02 01:01:17,510 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:17,514 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-02 01:01:17,517 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-02 01:01:17,518 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-02 01:01:17,522 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-02 01:01:17,527 [     scc.git] DEBUG Already up to date.

2024-05-02 01:01:17,527 [     scc.git] DEBUG Calling 'git fetch origin pull/333/head'
2024-05-02 01:01:17,986 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:17,986 [     scc.git] DEBUG  * branch                refs/pull/333/head -> FETCH_HEAD
2024-05-02 01:01:17,991 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-05-02 01:01:18,454 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:18,455 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-05-02 01:01:18,459 [     scc.git] DEBUG Calling 'git fetch origin pull/416/head'
2024-05-02 01:01:18,888 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:18,888 [     scc.git] DEBUG  * branch                refs/pull/416/head -> FETCH_HEAD
2024-05-02 01:01:18,892 [     scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-05-02 01:01:19,336 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:19,336 [     scc.git] DEBUG  * branch                refs/pull/427/head -> FETCH_HEAD
2024-05-02 01:01:19,341 [     scc.git] DEBUG Calling 'git fetch origin pull/436/head'
2024-05-02 01:01:19,751 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:19,751 [     scc.git] DEBUG  * branch                refs/pull/436/head -> FETCH_HEAD
2024-05-02 01:01:19,756 [     scc.git] DEBUG ## Unique users: []
2024-05-02 01:01:19,756 [     scc.git] DEBUG Get sha1 of %s
2024-05-02 01:01:19,756 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:19,761 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-02 01:01:19,766 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:19,769 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 333 (drop compatibility to test new Jenkins) b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-02 01:01:19,801 [     scc.git] DEBUG Auto-merging build.gradle
2024-05-02 01:01:19,807 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-02 01:01:19,812 [     scc.git] DEBUG  build.gradle | 8 ++++----
2024-05-02 01:01:19,812 [     scc.git] DEBUG  1 file changed, 4 insertions(+), 4 deletions(-)
2024-05-02 01:01:19,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:19,966 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-02 01:01:19,972 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:19,976 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-02 01:01:20,002 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-02 01:01:20,006 [     scc.git] DEBUG  .../shoola/agents/measurement/view/ServerROITable.java      | 13 ++++++++++---
2024-05-02 01:01:20,006 [     scc.git] DEBUG  1 file changed, 10 insertions(+), 3 deletions(-)
2024-05-02 01:01:20,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:20,376 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-02 01:01:20,382 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:20,386 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 416 (Prep 5.8.4) eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-02 01:01:20,426 [     scc.git] DEBUG Auto-merging build.gradle
2024-05-02 01:01:20,429 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-02 01:01:20,432 [     scc.git] DEBUG  CHANGELOG.md | 17 +++++++++++++++++
2024-05-02 01:01:20,432 [     scc.git] DEBUG  build.gradle |  6 +++---
2024-05-02 01:01:20,432 [     scc.git] DEBUG  2 files changed, 20 insertions(+), 3 deletions(-)
2024-05-02 01:01:20,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:20,796 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-02 01:01:20,803 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:20,806 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 427 (Handle out of space) f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-02 01:01:20,855 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-02 01:01:20,861 [     scc.git] DEBUG  .../shoola/env/data/ConnectionExceptionHandler.java    |  8 +++++++-
2024-05-02 01:01:20,861 [     scc.git] DEBUG  .../shoola/env/data/DataServicesFactory.java           | 11 +++++++++--
2024-05-02 01:01:20,861 [     scc.git] DEBUG  .../openmicroscopy/shoola/env/data/OMEROGateway.java   | 18 +++++++++++++-----
2024-05-02 01:01:20,861 [     scc.git] DEBUG  .../org/openmicroscopy/shoola/env/ui/TaskBarView.java  |  4 ++--
2024-05-02 01:01:20,861 [     scc.git] DEBUG  4 files changed, 31 insertions(+), 10 deletions(-)
2024-05-02 01:01:21,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:21,205 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-02 01:01:21,211 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:21,215 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 436 (Update apache common libs) e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-02 01:01:21,257 [     scc.git] DEBUG Auto-merging build.gradle
2024-05-02 01:01:21,260 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-02 01:01:21,263 [     scc.git] DEBUG  build.gradle | 3 ++-
2024-05-02 01:01:21,263 [     scc.git] DEBUG  1 file changed, 2 insertions(+), 1 deletion(-)
2024-05-02 01:01:21,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:21,618 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-02 01:01:21,656 [     scc.git] DEBUG Get sha1 of %s
2024-05-02 01:01:21,656 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:21,660 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-02 01:01:21,721 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f070fb2cac0> has no local changes
2024-05-02 01:01:21,721 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 333 jburel 'drop compatibility to test new Jenkins'
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 416 jburel 'Prep 5.8.4'
  - PR 427 dominikl 'Handle out of space'
  - PR 436 dominikl 'Update apache common libs'

Generated by OMERO-insight-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/47/)'
2024-05-02 01:01:21,734 [     scc.git] DEBUG [detached HEAD 900648a0a] merge master -Dorg -Snone
2024-05-02 01:01:21,734 [   scc.merge] INFO  Repository: ome/omero-insight
2024-05-02 01:01:21,734 [   scc.merge] INFO  Excluded PRs:
2024-05-02 01:01:21,734 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-05-02 01:01:21,735 [   scc.merge] INFO  Already up to date.
2024-05-02 01:01:21,735 [   scc.merge] INFO  
2024-05-02 01:01:21,735 [   scc.merge] INFO  Merged PRs:
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 416 jburel 'Prep 5.8.4'
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 427 dominikl 'Handle out of space'
2024-05-02 01:01:21,735 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs'
2024-05-02 01:01:21,735 [   scc.merge] INFO  
2024-05-02 01:01:21,735 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-02 01:01:21,735 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-05-02 01:01:22,174 [  scc.config] DEBUG Found github.token
2024-05-02 01:01:22,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-02 01:01:22,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:22,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:23,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-02 01:01:23,298 [      scc.gh] DEBUG 4595 remaining from 5000 (Reset at 01:05
2024-05-02 01:01:23,299 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-02 01:01:23,303 [     scc.git] DEBUG Check current status
2024-05-02 01:01:23,303 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-02 01:01:23,306 [     scc.git] DEBUG 900648a0a merge master -Dorg -Snone
2024-05-02 01:01:23,307 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-02 01:01:23,350 [  scc.config] DEBUG Found remote.origin.url
2024-05-02 01:01:23,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-05-02 01:01:24,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-02 01:01:24,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-02 01:01:25,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-02 01:01:25,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-02 01:01:25,517 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-02 01:01:25,557 [     scc.git] DEBUG Resetting...
2024-05-02 01:01:25,557 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-02 01:01:25,573 [     scc.git] DEBUG HEAD is now at 900648a0a merge master -Dorg -Snone
2024-05-02 01:01:25,573 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-02 01:01:25,610 [     scc.git] DEBUG Check current status
2024-05-02 01:01:25,610 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-02 01:01:25,613 [     scc.git] DEBUG 900648a0a merge master -Dorg -Snone
2024-05-02 01:01:25,614 [     scc.git] DEBUG Calling 'git submodule status'
2024-05-02 01:01:25,649 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-05-02 01:01:25,650 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-05-02 01:01:25,650 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-05-02 01:01:25,650 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-05-02 01:01:25,650 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-05-02 01:01:25,650 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-05-02 01:01:25,650 [    scc.repo] DEBUG ## PRs found:
2024-05-02 01:01:26,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-05-02 01:01:26,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-05-02 01:01:26,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-05-02 01:01:27,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-05-02 01:01:27,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9 HTTP/1.1" 200 None
2024-05-02 01:01:28,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:28,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-02 01:01:29,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9 HTTP/1.1" 200 None
2024-05-02 01:01:29,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/e43ef9b64e4734d327b92745588603a350b420c9?per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:30,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9 HTTP/1.1" 200 None
2024-05-02 01:01:30,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/e43ef9b64e4734d327b92745588603a350b420c9/status HTTP/1.1" 200 None
2024-05-02 01:01:30,656 [    scc.repo] DEBUG   - PR 436 dominikl 'Update apache common libs'
2024-05-02 01:01:31,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/427 HTTP/1.1" 200 None
2024-05-02 01:01:31,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe HTTP/1.1" 200 None
2024-05-02 01:01:32,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:32,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-02 01:01:33,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe HTTP/1.1" 200 None
2024-05-02 01:01:33,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/f84dda5c47084c7416e01e6ecca8fede1f92defe?per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:33,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe HTTP/1.1" 200 None
2024-05-02 01:01:34,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f84dda5c47084c7416e01e6ecca8fede1f92defe/status HTTP/1.1" 200 None
2024-05-02 01:01:34,331 [    scc.repo] DEBUG   - PR 427 dominikl 'Handle out of space'
2024-05-02 01:01:34,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416 HTTP/1.1" 200 None
2024-05-02 01:01:35,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/416/comments HTTP/1.1" 200 None
2024-05-02 01:01:35,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549 HTTP/1.1" 200 None
2024-05-02 01:01:36,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:36,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-02 01:01:37,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549 HTTP/1.1" 200 None
2024-05-02 01:01:37,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/eb813764c4f20bfc2cfc8ab22c027298ef628549?per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:38,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549 HTTP/1.1" 200 None
2024-05-02 01:01:38,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/eb813764c4f20bfc2cfc8ab22c027298ef628549/status HTTP/1.1" 200 None
2024-05-02 01:01:38,541 [    scc.repo] DEBUG   - PR 416 jburel 'Prep 5.8.4'
2024-05-02 01:01:38,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-05-02 01:01:39,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-05-02 01:01:39,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-05-02 01:01:40,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:40,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-02 01:01:41,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-05-02 01:01:41,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:42,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-05-02 01:01:42,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-05-02 01:01:42,732 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-02 01:01:43,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-05-02 01:01:43,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-05-02 01:01:44,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e HTTP/1.1" 200 None
2024-05-02 01:01:44,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-02 01:01:45,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/b66e93349e2ddb5c1908f922c7c63a46722bd48e HTTP/1.1" 200 None
2024-05-02 01:01:45,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/b66e93349e2ddb5c1908f922c7c63a46722bd48e?per_page=1 HTTP/1.1" 200 2
2024-05-02 01:01:45,449 [    scc.repo] DEBUG   - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-02 01:01:45,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-05-02 01:01:46,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-05-02 01:01:46,439 [    scc.repo] DEBUG ## Branches found:
2024-05-02 01:01:46,439 [     scc.git] DEBUG Get sha1 of %s
2024-05-02 01:01:46,440 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:46,443 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-02 01:01:46,447 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-02 01:01:46,447 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-02 01:01:46,451 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-02 01:01:46,457 [     scc.git] DEBUG Already up to date.

2024-05-02 01:01:46,457 [     scc.git] DEBUG Calling 'git fetch origin pull/333/head'
2024-05-02 01:01:46,841 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:46,841 [     scc.git] DEBUG  * branch                refs/pull/333/head -> FETCH_HEAD
2024-05-02 01:01:46,846 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-05-02 01:01:47,263 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:47,263 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-05-02 01:01:47,269 [     scc.git] DEBUG Calling 'git fetch origin pull/416/head'
2024-05-02 01:01:47,658 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:47,658 [     scc.git] DEBUG  * branch                refs/pull/416/head -> FETCH_HEAD
2024-05-02 01:01:47,663 [     scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-05-02 01:01:48,046 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:48,047 [     scc.git] DEBUG  * branch                refs/pull/427/head -> FETCH_HEAD
2024-05-02 01:01:48,051 [     scc.git] DEBUG Calling 'git fetch origin pull/436/head'
2024-05-02 01:01:48,439 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-05-02 01:01:48,439 [     scc.git] DEBUG  * branch                refs/pull/436/head -> FETCH_HEAD
2024-05-02 01:01:48,444 [     scc.git] DEBUG ## Unique users: []
2024-05-02 01:01:48,444 [     scc.git] DEBUG Get sha1 of %s
2024-05-02 01:01:48,444 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:48,447 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-02 01:01:48,452 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:48,455 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 333 (drop compatibility to test new Jenkins) b66e93349e2ddb5c1908f922c7c63a46722bd48e'
2024-05-02 01:01:48,460 [     scc.git] DEBUG Already up to date.
2024-05-02 01:01:48,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:48,628 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-02 01:01:48,633 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:48,636 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-05-02 01:01:48,641 [     scc.git] DEBUG Already up to date.
2024-05-02 01:01:49,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:49,029 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-02 01:01:49,034 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:49,037 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 416 (Prep 5.8.4) eb813764c4f20bfc2cfc8ab22c027298ef628549'
2024-05-02 01:01:49,043 [     scc.git] DEBUG Already up to date.
2024-05-02 01:01:49,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:49,452 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-02 01:01:49,468 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:49,472 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Handle out of space) f84dda5c47084c7416e01e6ecca8fede1f92defe'
2024-05-02 01:01:49,477 [     scc.git] DEBUG Already up to date.
2024-05-02 01:01:49,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:49,865 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-02 01:01:49,871 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:49,874 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 436 (Update apache common libs) e43ef9b64e4734d327b92745588603a350b420c9'
2024-05-02 01:01:49,881 [     scc.git] DEBUG Already up to date.
2024-05-02 01:01:50,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-02 01:01:50,264 [     scc.git] DEBUG Calling 'git submodule update'
2024-05-02 01:01:50,304 [     scc.git] DEBUG Get sha1 of %s
2024-05-02 01:01:50,304 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-02 01:01:50,307 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-02 01:01:50,346 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-05-02 01:01:50,356 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f66a0933ac0> has no local changes
2024-05-02 01:01:50,356 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 333 jburel 'drop compatibility to test new Jenkins'
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 416 jburel 'Prep 5.8.4'
  - PR 427 dominikl 'Handle out of space'
  - PR 436 dominikl 'Update apache common libs'

Generated by OMERO-insight-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/47/)'
2024-05-02 01:01:50,369 [     scc.git] DEBUG [detached HEAD 52ebb0f2a] merge master -Dorg -Ssuccess-only
2024-05-02 01:01:50,369 [   scc.merge] INFO  Repository: ome/omero-insight
2024-05-02 01:01:50,369 [   scc.merge] INFO  Excluded PRs:
2024-05-02 01:01:50,369 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-05-02 01:01:50,369 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-05-02 01:01:50,370 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-05-02 01:01:50,370 [   scc.merge] INFO  Already up to date.
2024-05-02 01:01:50,370 [   scc.merge] INFO  
2024-05-02 01:01:50,370 [   scc.merge] INFO  Merged PRs:
2024-05-02 01:01:50,370 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins'
2024-05-02 01:01:50,370 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-05-02 01:01:50,370 [   scc.merge] INFO    - PR 416 jburel 'Prep 5.8.4'
2024-05-02 01:01:50,370 [   scc.merge] INFO    - PR 427 dominikl 'Handle out of space'
2024-05-02 01:01:50,370 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs'
2024-05-02 01:01:50,370 [   scc.merge] INFO  
2024-05-02 01:01:50,370 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-02 01:01:50,370 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.0 to 5.9.1-SNAPSHOT
Commit all component version changes
[detached HEAD 248e71292] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2024-05-02 01:01:56,838 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci